View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0603_high_29 (Length: 225)
Name: NF0603_high_29
Description: NF0603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0603_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 35762310 - 35762482
Alignment:
| Q |
1 |
aattggtaatacattgtagtgtttttatccaccatagccatggttaatatgactaggttacttctctgctcgattttgcagtgtatagaggccgtttctg |
100 |
Q |
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| T |
35762310 |
aattggtaatacattgtagtgtttttatccaccatagccatggttaatatgactaggttacttctctgctcgattttgcagtgtatagaggccgtttctg |
35762409 |
T |
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| Q |
101 |
tgnnnnnnnaacagcataatttttgttgttgtttggtttctggtcagcctacggcgccggcctttggtggagg |
173 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35762410 |
tgtttttttaacagcataatttttgttgttgtttggtttctggtcagcctacggcgccggcctttggtggagg |
35762482 |
T |
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