View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0603_low_34 (Length: 264)
Name: NF0603_low_34
Description: NF0603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0603_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 32668771 - 32669002
Alignment:
| Q |
9 |
atatttgttgactggtttttaataatttttattgatatattaatcatgttgttcactatttataaaaatgttttttaacctaata-ttttaataggtaaa |
107 |
Q |
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| T |
32668771 |
atatttgttgactggtttttaataatttttattgatatattaatcatgttgttcactatttataaaaatgttttttaacctaatatttttaataggtaaa |
32668870 |
T |
|
| Q |
108 |
ctatttgtcaacatattatcaaat---nnnnnnnnttgtcaaccaattttttaattacaaggagtgttcacattttacacccgaatactttggttaaatt |
204 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32668871 |
ctatttgtcaacatattatcaaataaaaaaaaatattgtcaaccaattttttaattacaaggagtgttcacgttttacacccgaatactttggttaaatt |
32668970 |
T |
|
| Q |
205 |
gaatttgttgttacccaagttacccttccaat |
236 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
32668971 |
gaatttgttgttacccaagttacccttccaat |
32669002 |
T |
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