View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0603_low_42 (Length: 239)

Name: NF0603_low_42
Description: NF0603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0603_low_42
NF0603_low_42
[»] chr3 (1 HSPs)
chr3 (1-61)||(3811071-3811131)


Alignment Details
Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3811131 - 3811071
Alignment:
1 tcaatggaatatagctcattaatgtaattttcatggatattgataacttcaaccgataaca 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
3811131 tcaatggaatatagctcattaatgtaattttcatggatattgataacttcaaccgataaca 3811071  T

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