View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0605_low_2 (Length: 610)
Name: NF0605_low_2
Description: NF0605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0605_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 571; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 571; E-Value: 0
Query Start/End: Original strand, 11 - 581
Target Start/End: Complemental strand, 16843869 - 16843299
Alignment:
| Q |
11 |
cacagaatcgttgtagtaattgtccgtgcccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgtt |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843869 |
cacagaatcgttgtagtaattgtccgtgcccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgtt |
16843770 |
T |
|
| Q |
111 |
ggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843769 |
ggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattat |
16843670 |
T |
|
| Q |
211 |
tagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagata |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843669 |
tagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagata |
16843570 |
T |
|
| Q |
311 |
tgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatg |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843569 |
tgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatg |
16843470 |
T |
|
| Q |
411 |
cttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaat |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843469 |
cttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaat |
16843370 |
T |
|
| Q |
511 |
taagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843369 |
taagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
16843299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 11 - 580
Target Start/End: Complemental strand, 16846536 - 16845964
Alignment:
| Q |
11 |
cacagaatcgttgtagtaattgtccgtgcccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgtt |
110 |
Q |
| |
|
||||||||| || ||||||||| || | |||||||| ||||||||| | | |||||| | | ||||||||||||||||| |||| ||| ||||||||| |
|
|
| T |
16846536 |
cacagaatcattatagtaattgacctttcccatgtactgcaaaccagttttattatcattcgcgttcatcattccttgaaaattcttgatacatgatgtt |
16846437 |
T |
|
| Q |
111 |
ggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattat |
210 |
Q |
| |
|
||||| | ||||| || ||||| | ||| || ||||||||||| || |||||||||||||||||||||||||| |||||| |||| ||| |||| |
|
|
| T |
16846436 |
ggcaacggtccactgaatttgttatcgaagatgtccaaaattctcaattt-ggaaatggatgcttggtgctagaacatgtgattgaaccataaagtttat |
16846338 |
T |
|
| Q |
211 |
tagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagata |
310 |
Q |
| |
|
| || | |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16846337 |
ttgaccttaaactgagtacatgtaactcttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagata |
16846238 |
T |
|
| Q |
311 |
tgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatg |
410 |
Q |
| |
|
|||||||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||| |
|
|
| T |
16846237 |
tgaacagttagctaaagaccgtggtaatggtccttccaattggttgccattcaactttatagtgacaaacacatttcctttggaaaaggttctaggaatg |
16846138 |
T |
|
| Q |
411 |
cttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttcctaggcattgtgga----atcatacctgtcaaattgttgtgagcc |
506 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| | | ||||||||||||||| |
|
|
| T |
16846137 |
cttccaaagaggttgttcatttgcatatccaatacattaagagaagttaatgttcccaagcattgtggaatatatcatacatattaaattgttgtgagcc |
16846038 |
T |
|
| Q |
507 |
aaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagag |
580 |
Q |
| |
|
||||| || | | | ||| ||||||| |||||||||| ||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
16846037 |
aaattgagaacaatcaggaaacttgcactgcagaatgtggaagacatatcttctgtgaagttgttgtttgagag |
16845964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 71 - 581
Target Start/End: Complemental strand, 24218544 - 24218034
Alignment:
| Q |
71 |
cacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatgga |
170 |
Q |
| |
|
|||||| |||||||||||||| |||| || ||| |||||||||| || ||||| ||||| || ||||||||| ||||||||| ||| ||||||| |
|
|
| T |
24218544 |
cacattaatcattccttgaaaattcttgaggcaagatgttggcacggggccacggaaattattaccagagacatcgtaaattctcatcttcggaaatgat |
24218445 |
T |
|
| Q |
171 |
tgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaatgtat |
270 |
Q |
| |
|
|| ||||||||||||||||||||| | |||||||||| ||| ||||||||| |||||||||||||||||| ||| ||| | |||| |||||||||||| |
|
|
| T |
24218444 |
tgtttggtgctagaacaagtgattccaccatgaagatgatttgatcgtaaactgagtacctgtaactcttgcagaacttctaaccaattgggaaatgtat |
24218345 |
T |
|
| Q |
271 |
cctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaactttat |
370 |
Q |
| |
|
| | |||| ||||||| |||||||||||||||||||| | || ||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
24218344 |
cgtttatgatgttgtctccaaggtccaaaacttcaagttgtgtgcagtgagccaaagactgtggtaatggtccctccaattggttgccattcaactttat |
24218245 |
T |
|
| Q |
371 |
agtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttcctagg |
470 |
Q |
| |
|
||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||| |
|
|
| T |
24218244 |
agtctcgaatgcatttccttccgaaaatgttttaggcatgcttccatagaggttgttcatttgcatatccaatacagaaagataaggaaatgttcccagg |
24218145 |
T |
|
| Q |
471 |
cattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgt |
570 |
Q |
| |
|
|||||||||||| | ||||| |||||||||| ||||||||| |||||||| |||| |||||||||||| | || ||| ||| |||||||||||||||| |
|
|
| T |
24218144 |
cattgtggaatcgttcctgttaaattgttgttagccaaattgagcaaattcagggaacttgcattgcacagtgacaaagcaatgtctcctgtgaagttgt |
24218045 |
T |
|
| Q |
571 |
tatttgagagt |
581 |
Q |
| |
|
| ||||||||| |
|
|
| T |
24218044 |
tgtttgagagt |
24218034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 492 - 580
Target Start/End: Complemental strand, 16843253 - 16843165
Alignment:
| Q |
492 |
aaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagag |
580 |
Q |
| |
|
|||||||||||||||||||| || | ||| | | ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
16843253 |
aaattgttgtgagccaaattgagaacattcaagaaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtttgagag |
16843165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 399; Significance: 0; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 43 - 581
Target Start/End: Original strand, 37532419 - 37532957
Alignment:
| Q |
43 |
tgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagac |
142 |
Q |
| |
|
|||||||||||||||| ||||| |||| ||||||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||| || |
|
|
| T |
37532419 |
tgtattgcaaaccaatttggctgtcattcacattcatcattcctttaaagttcttgatgcatgatattggcaagggcccactaaaattgttgttagaaac |
37532518 |
T |
|
| Q |
143 |
atcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgt |
242 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| |||||||| || || |||||||||||| |
|
|
| T |
37532519 |
atcaaaaattctcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgt |
37532618 |
T |
|
| Q |
243 |
agagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatggtc |
342 |
Q |
| |
|
|||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
37532619 |
agagtttctagccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaagaaatgaacagtgagacaaagactggggtaatggtc |
37532718 |
T |
|
| Q |
343 |
cttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatccaa |
442 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37532719 |
cttccaattggtttccattcaactttatagtctgaaatgcattttctttggaaaaggttctaggaatgtttccatagaggttgttcatttgcatatccaa |
37532818 |
T |
|
| Q |
443 |
tacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaat |
542 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| |||||||||||||||| |
|
|
| T |
37532819 |
tacattaagagaagttaatgttcccaggcattgtggaatcatacctgtcaaattgttgtgagccaaattgagaacattcaggtaacttgcattgcagaat |
37532918 |
T |
|
| Q |
543 |
gttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37532919 |
gttgaagaaatatctcctgtgaagttgttatttgagagt |
37532957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 43 - 581
Target Start/End: Original strand, 37593523 - 37594061
Alignment:
| Q |
43 |
tgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagac |
142 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| || |
|
|
| T |
37593523 |
tgtattgcaaaccaatttggctgtcattcacattcatcattccttgaaagttcttgatgcatgatgttggcaagggcccactaaaattgttgatagaaac |
37593622 |
T |
|
| Q |
143 |
atcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgt |
242 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| |||||||| || || |||||||||||| |
|
|
| T |
37593623 |
atcaaaaattctcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgt |
37593722 |
T |
|
| Q |
243 |
agagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatggtc |
342 |
Q |
| |
|
|||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
37593723 |
agagtttctagccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaagaaatgaacagtgagacaaagactgtggtaatggtc |
37593822 |
T |
|
| Q |
343 |
cttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatccaa |
442 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37593823 |
cttccaattggtttccattcaactttatagtctgaaatgcattttctttggaaaaggttctaggaatgtttccatagaggttgttcatttgcatatccaa |
37593922 |
T |
|
| Q |
443 |
tacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaat |
542 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||| ||| |||||||||||||||| |
|
|
| T |
37593923 |
tacattaagagaagttaatgttcccaggcattgtggaatcatacctgttaaattgttgtgagccaaattgagaacattcaggtaacttgcattgcagaat |
37594022 |
T |
|
| Q |
543 |
gttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
37594023 |
gttgaagatatatctcctgtgaaattgttgtttgagagt |
37594061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 43 - 581
Target Start/End: Original strand, 37695914 - 37696452
Alignment:
| Q |
43 |
tgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagac |
142 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| || |
|
|
| T |
37695914 |
tgtattgcaaaccaatttggctgtcattcacattcatcattccttgaaagttcttgatgcatgatgttggcaagggcccactaaaattgttgatagaaac |
37696013 |
T |
|
| Q |
143 |
atcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgt |
242 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| |||||||| || || |||||||||||| |
|
|
| T |
37696014 |
atcaaaaattctcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgt |
37696113 |
T |
|
| Q |
243 |
agagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatggtc |
342 |
Q |
| |
|
|||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
37696114 |
agagtttctagccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaagaaatgaacagtgagacaaagactgtggtaatggtc |
37696213 |
T |
|
| Q |
343 |
cttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatccaa |
442 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37696214 |
cttccaattggtttccattcaactttatagtctgaaatgcattttctttggaaaaggttctaggaatgtttccatagaggttgttcatttgcatatccaa |
37696313 |
T |
|
| Q |
443 |
tacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaat |
542 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||| ||| |||||||||||||||| |
|
|
| T |
37696314 |
tacattaagagaagttaatgttcccaggcattgtggaatcatacctgttaaattgttgtgagccaaattgagaacattcaggtaacttgcattgcagaat |
37696413 |
T |
|
| Q |
543 |
gttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
37696414 |
gttgaagatatatctcctgtgaaattgttgtttgagagt |
37696452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 39 - 581
Target Start/End: Complemental strand, 37401843 - 37401301
Alignment:
| Q |
39 |
cccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttag |
138 |
Q |
| |
|
|||||||||||||||||| | | | |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37401843 |
cccatgtattgcaaaccagtgttattgtcattcacattcatcattccttgaaagttcttgatgcatgatgttggcaagggcccactaaaattgttgttag |
37401744 |
T |
|
| Q |
139 |
agacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactc |
238 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| | |||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
37401743 |
agacatcaaaaattctcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactc |
37401644 |
T |
|
| Q |
239 |
ttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaat |
338 |
Q |
| |
|
| |||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |
|
|
| T |
37401643 |
tggtagagtttctagccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaat |
37401544 |
T |
|
| Q |
339 |
ggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatat |
438 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37401543 |
ggtccttccaattggttgccattcaactttatagtctcaaatgcatttcctttggtaaaggttctaggaatgcttccatagaggttgttcatttgcatat |
37401444 |
T |
|
| Q |
439 |
ccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgca |
538 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||| |||||||| |
|
|
| T |
37401443 |
ccaatacattaagagaagttaatgttcccaggcattgtggaatcatacctgtcaaattgttgtgagccaaatcgagcacataaagggaactggcattgca |
37401344 |
T |
|
| Q |
539 |
gaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
37401343 |
gaatgttgaagaaatgtatcctgtgaagttgttatttgagagt |
37401301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 39 - 581
Target Start/End: Original strand, 37639061 - 37639603
Alignment:
| Q |
39 |
cccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttag |
138 |
Q |
| |
|
|||||||||||||||||| | | | |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37639061 |
cccatgtattgcaaaccagtgttattgtcattcacattcatcattccttgaaagttcttgatgcatgatgttggcaagggcccactaaaattgttgttag |
37639160 |
T |
|
| Q |
139 |
agacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactc |
238 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| | |||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
37639161 |
agacatcaaaaattctcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactc |
37639260 |
T |
|
| Q |
239 |
ttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaat |
338 |
Q |
| |
|
| |||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |
|
|
| T |
37639261 |
tggtagagtttctagccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaat |
37639360 |
T |
|
| Q |
339 |
ggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatat |
438 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37639361 |
ggtccttccaattggttgccattcaactttatagtctcaaatgcatttcctttggagaaggttctaggaatgcttccatagaggttgttcatttgcatat |
37639460 |
T |
|
| Q |
439 |
ccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgca |
538 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||| |||||||| |
|
|
| T |
37639461 |
ccaatacagtaagagaagttaatgttcccaggcattgtggaatcatacctgtcaaattgttgtgagccaaatcgagcatataaagggaactggcattgca |
37639560 |
T |
|
| Q |
539 |
gaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
37639561 |
gaatgttgaagaaatgtatcctgtgaagttgttatttgagagt |
37639603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 39 - 581
Target Start/End: Original strand, 37823219 - 37823761
Alignment:
| Q |
39 |
cccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttag |
138 |
Q |
| |
|
|||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37823219 |
cccatgtattgcaaaccaatttggtcgtcactcacattcatcattccttgaaagttcttgatgcatgatgttggcaagggcccactaaaattgttgttag |
37823318 |
T |
|
| Q |
139 |
agacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactc |
238 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| | |||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
37823319 |
agacatcaaaaattctcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactc |
37823418 |
T |
|
| Q |
239 |
ttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaat |
338 |
Q |
| |
|
| |||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |
|
|
| T |
37823419 |
tggtagagtttctagccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaat |
37823518 |
T |
|
| Q |
339 |
ggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatat |
438 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37823519 |
ggtccttccaattggttgccattcaactttatagtctcaaatgcatttcctttggtaaaggttctaggaatgcttccatagaggttgttcatttgcatat |
37823618 |
T |
|
| Q |
439 |
ccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgca |
538 |
Q |
| |
|
||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||| |||||||| |
|
|
| T |
37823619 |
ccaatacatgaagagaatttaatgttcccaggcattgtggaatcatacctgtcaaattgttgtgagccaaatcgagcatataaagggaactggcattgca |
37823718 |
T |
|
| Q |
539 |
gaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
37823719 |
gaatgttgaagaaatgtatcctgtgaagttgttatttgagagt |
37823761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 39 - 581
Target Start/End: Complemental strand, 37393722 - 37393180
Alignment:
| Q |
39 |
cccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttag |
138 |
Q |
| |
|
|||||||||||||||||||| ||||| | || ||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
37393722 |
cccatgtattgcaaaccaatttggctgttattcacatccatcattccttgaaagttcttgaagcatgatgttggcaaggggccactaaaattgttactag |
37393623 |
T |
|
| Q |
139 |
agacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactc |
238 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||||||| || ||||||||||| |
|
|
| T |
37393622 |
agacatcataaattctcaacttaggaaatggatgcttggtgctagaacatgtgattgacccatgaagatgatttgatcgtaaacttagcacctgtaactc |
37393523 |
T |
|
| Q |
239 |
ttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaat |
338 |
Q |
| |
|
|||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| | ||||||||| |
|
|
| T |
37393522 |
ttgtagagtttctagccaattgggaaaagtatcctctatgttgttgtcaccaaggtccaatacttcaagatatgaacagtaagccaaacattgtggtaat |
37393423 |
T |
|
| Q |
339 |
ggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatat |
438 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37393422 |
ggtccttccaattggtttccattcaattttatagtctcaaatatatttcctttggaaaaggttccaggaatgcttccacagaggttgttcatttgcatat |
37393323 |
T |
|
| Q |
439 |
ccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgca |
538 |
Q |
| |
|
|||| | | ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | || ||||| ||| |||||||| |
|
|
| T |
37393322 |
ccaaaatagagagataagaaaatgttcctagacattgtggaatcatacctgtcaaattgttgtgagccaaattgaggatataaagggaactagcattgca |
37393223 |
T |
|
| Q |
539 |
gaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37393222 |
gaatgttgaagaaatatctcctgtgaagttgttgtttgagagt |
37393180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 72 - 581
Target Start/End: Original strand, 37702031 - 37702540
Alignment:
| Q |
72 |
acattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggat |
171 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
37702031 |
acattaatcattccttgaaagttcttgatgcatgatgttggcaaggggccactaaaattgttgttagaggcatcaaaaattctcaacttaggaaatgaat |
37702130 |
T |
|
| Q |
172 |
gcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaatgtatc |
271 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||| ||| ||||||||| || |||||||||||| ||| |||||| |||||| ||||||||||||| |
|
|
| T |
37702131 |
gcttggtgctagaacaagtgattgcaccatgaagatgatttgatcgtaaactcagcacctgtaactctggtaaagtttctagccaattgggaaatgtatc |
37702230 |
T |
|
| Q |
272 |
ctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaactttata |
371 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37702231 |
ctctatgttgttgtcaccaaggtccaatacttcaagatttgaacattgagccaaagactgcggtaatggtccttccaattggttgccattcaactttata |
37702330 |
T |
|
| Q |
372 |
gtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttcctaggc |
471 |
Q |
| |
|
|||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | | ||| || |||||||| || | |
|
|
| T |
37702331 |
gtctcaaatgcatttcctttggagaaggttctaggaatgcttccatagaggttgttcatttgcatatccaaaatagagagatgaggaaatgttcccagac |
37702430 |
T |
|
| Q |
472 |
attgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgtt |
571 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || | | ||||| |||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
37702431 |
attgtggaatcatacctgtcaaattgttgtgagccaaattgagaatgtaaagggaacttgcattgcagaatgttgaagagatatttcctgtgaagttgtt |
37702530 |
T |
|
| Q |
572 |
atttgagagt |
581 |
Q |
| |
|
||||||||| |
|
|
| T |
37702531 |
gtttgagagt |
37702540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 66 - 581
Target Start/End: Original strand, 37710846 - 37711361
Alignment:
| Q |
66 |
tcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaa |
165 |
Q |
| |
|
|||| ||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37710846 |
tcattcaccttcatcattccttgaaagttcttgatgcatgatgctggcaagggcccactaaaattgttgttagagacatcaaaaattctcaacttgggaa |
37710945 |
T |
|
| Q |
166 |
atggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaa |
265 |
Q |
| |
|
||| |||||||||||||||||| |||||| | |||||||||||||| ||||||||| | |||||||||||| |||||||||| |||||| ||||| |
|
|
| T |
37710946 |
atgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctagccaatcaggaaa |
37711045 |
T |
|
| Q |
266 |
tgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaac |
365 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
37711046 |
tgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagatatgaacagttagccaaagattgtggtaatgatccttccaattggttgccattcaac |
37711145 |
T |
|
| Q |
366 |
tttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttc |
465 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||| |
|
|
| T |
37711146 |
tttatagtctcaaatgcatttcctttggtaaaggttctaggaatgcttccatagaggttgttcatttgcatatccaaaacatagagattaggaaatgttc |
37711245 |
T |
|
| Q |
466 |
ctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaa |
565 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||| ||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
37711246 |
ctaggcattgtggaatcatacctttcaaattgttgtgagccaaatcgagcacataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaa |
37711345 |
T |
|
| Q |
566 |
gttgttatttgagagt |
581 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
37711346 |
gttgttatttgagagt |
37711361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 11 - 581
Target Start/End: Complemental strand, 37383199 - 37382629
Alignment:
| Q |
11 |
cacagaatcgttgtagtaattgtccgtgcccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgtt |
110 |
Q |
| |
|
||||||||| || ||||||||| | | |||||||||||||||||| | | | |||| ||||||||||||||||||||| |||| |||||| |||||| |
|
|
| T |
37383199 |
cacagaatcattatagtaattggacttacccatgtattgcaaaccagtgttattgtcattcacattcatcattccttgaaaattcttgatgcacgatgtt |
37383100 |
T |
|
| Q |
111 |
ggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattat |
210 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||| | |||||||| |||| |
|
|
| T |
37383099 |
ggcaagggcccaataaaattgttgttagagacatcaaaaattctcaacttgggaaatggatgtttggtgctagagcatgtgattgcgccatgaagtttat |
37383000 |
T |
|
| Q |
211 |
tagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagata |
310 |
Q |
| |
|
| |||| |||| ||| |||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||||||||||||| || | |
|
|
| T |
37382999 |
ttgatcttaaactgagcacctgtaattcttgtagagtttcaagccaattgggaaaagtatcctctacgttgttgtctccaaggtccaaaacttcgagttt |
37382900 |
T |
|
| Q |
311 |
tgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatg |
410 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||| |
|
|
| T |
37382899 |
tgtacagtgagccaaagactgtggtaatggtccttccaatcggtttccattcaactttattgtctcaaatgcatttcctttggagaaggttctaggaatg |
37382800 |
T |
|
| Q |
411 |
cttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaat |
510 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
37382799 |
tgtccatagaggttgttcatttgcatatccaataccgaaagagaaggaaatgttcccaagcattgtggaatcatgccagttaaattgttgtgagccaaat |
37382700 |
T |
|
| Q |
511 |
taagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
| |||| ||| |||| |||||| ||||| |||| || ||| | ||||||||||||||| || |||||| |
|
|
| T |
37382699 |
tgagcacattcagggaacttgcgttgcacaatgaaaaatcaatgtttcctgtgaagttgttgttcgagagt |
37382629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 11 - 580
Target Start/End: Original strand, 37434997 - 37435566
Alignment:
| Q |
11 |
cacagaatcgttgtagtaattgtccgtgcccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgtt |
110 |
Q |
| |
|
||||||||| || |||||||||| | | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
37434997 |
cacagaatcattatagtaattgttcttacccatgtattgcaaaccaatctggctatcattcacattcatcattccttgaaagttcttgatacatgatgtt |
37435096 |
T |
|
| Q |
111 |
ggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattat |
210 |
Q |
| |
|
||||||| |||||||||||||| ||| ||||||||||| ||||||| ||| ||||| |||||| ||||||| |||||| |||| ||| |||| |
|
|
| T |
37435097 |
ggcaaggatccactaaaattgttaccgaagatgtcaaaaattcttaacttagaaaaaggatggttggtgttagaacaggtgattgaaccattaagtttat |
37435196 |
T |
|
| Q |
211 |
tagatcgtaaaacgagtacctgtaactcttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagata |
310 |
Q |
| |
|
| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||| || || | |
|
|
| T |
37435197 |
ttgatcttaaactgagtacctgtaactcttgtagagtttctagccaattgggaaatgtatcctctatgttgttgtatccaaggtccaaaattttgagttc |
37435296 |
T |
|
| Q |
311 |
tgaacagtgagacaaagactgtggtaatggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatg |
410 |
Q |
| |
|
|| |||||||| |||||| || |||||||||||||| |||||||| ||||||||||||||||||| || ||||||||| ||||||| |||||||| ||| |
|
|
| T |
37435297 |
tgtacagtgagccaaagattgaggtaatggtccttctaattggttgccattcaactttatagtctcgaaggcatttcctctggaaaaagttttaggcatg |
37435396 |
T |
|
| Q |
411 |
cttccatagaggttgttcatttgcatatccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaat |
510 |
Q |
| |
|
||||||| ||||||||||||||||||||||| || |||| ||| |||||||| ||||||| |||||| || |||||||| |||||||| ||||||| |
|
|
| T |
37435397 |
cttccattaaggttgttcatttgcatatccaaaacggaaagaaaaggaaatgttcccaggcattttggaattatgcctgtcaatttgttgtgggccaaat |
37435496 |
T |
|
| Q |
511 |
taagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagag |
580 |
Q |
| |
|
| |||| || | || ||||| | ||| ||| |||||||||| ||||||| ||||||||| |||||||| |
|
|
| T |
37435497 |
tgagcacgttcatggagcttgcttggcacaattttgaagaaatgtctcctgcgaagttgttgtttgagag |
37435566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 141 - 502
Target Start/End: Complemental strand, 37413908 - 37413547
Alignment:
| Q |
141 |
acatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactctt |
240 |
Q |
| |
|
|||| ||| ||||||||||| ||||||| |||||| ||||||||||| |||||| | |||||||||||||| ||||||||| || ||||||||||||| |
|
|
| T |
37413908 |
acataaaatattctcaacttgggaaatgtatgctttgtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttagcacctgtaactctt |
37413809 |
T |
|
| Q |
241 |
gtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaatgg |
340 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| | || | || |||||||||||||||||| |
|
|
| T |
37413808 |
gtagagtttctagccaattgggaaatgtatcctctatattgttgtcaccaaggtccagaacttcaagatttatgcactaagccaaagactgtggtaatgg |
37413709 |
T |
|
| Q |
341 |
tccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatatcc |
440 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| ||| ||||| ||||||||||||||||||| |||||| ||||||||| | ||||||||||||||||||| |
|
|
| T |
37413708 |
tccttccaattgatttccgttcaactttatcatctcaaatgtatttcctttggaaaaggttctaggaaagcttccatacaagttgttcatttgcatatcc |
37413609 |
T |
|
| Q |
441 |
aatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtg |
502 |
Q |
| |
|
|||| | |||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
37413608 |
aatatagaaagagaaggaaatgttcctaggcattgtggaatcatgcctgttaaattgttgtg |
37413547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 37428339 - 37428562
Alignment:
| Q |
11 |
cacagaatcgttgtagtaattgtccgtgcccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgtt |
110 |
Q |
| |
|
||||||||| || ||||||||| || | |||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
37428339 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
37428438 |
T |
|
| Q |
111 |
ggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattat |
210 |
Q |
| |
|
||||||| ||||||||| | || ||| ||| || |||||||||||||| || |||||||| ||||| |||||||||||||| ||||| || |||| |
|
|
| T |
37428439 |
ggcaagggaccactaaaaattttattatagatgtcgaaaattctcaactt-gggaatggatgtttggtcatagaacaagtgattgtaccatgcagtttat |
37428537 |
T |
|
| Q |
211 |
tagatcgtaaaacgagtacctgtaa |
235 |
Q |
| |
|
| |||| ||||| ||| |||||||| |
|
|
| T |
37428538 |
ttgatcttaaaatgagaacctgtaa |
37428562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 495 - 581
Target Start/End: Original strand, 37594110 - 37594196
Alignment:
| Q |
495 |
ttgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37594110 |
ttgttgtgagccaaattgagggtataaagggaacttgcattgcagaatgttgaagaaatatttcctgtgaagttgttatttgagagt |
37594196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 492 - 581
Target Start/End: Original strand, 37696498 - 37696587
Alignment:
| Q |
492 |
aaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
|||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
37696498 |
aaattgttgtgagccaaattgagggtataaagggaacttgcattgcagaatgttgaagaaatatttcctgtgaagttgttgtttgagagt |
37696587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 495 - 581
Target Start/End: Complemental strand, 37401252 - 37401166
Alignment:
| Q |
495 |
ttgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||||| || | ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
37401252 |
ttgttgtgagccaaattgagggtacgaagggaacttgcattgcagaatgttgaagaaatgtatcctgtgaagttgttatttgagagt |
37401166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 495 - 581
Target Start/End: Original strand, 37639652 - 37639738
Alignment:
| Q |
495 |
ttgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||||| || || ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37639652 |
ttgttgtgagccaaattgagggtataaagggaacttgcgttgcggaatgttgaagaaatatttcctgtgaagttgttatttgagagt |
37639738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 495 - 581
Target Start/End: Original strand, 37711410 - 37711496
Alignment:
| Q |
495 |
ttgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttgagagt |
581 |
Q |
| |
|
||||||||||||||||| || || ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37711410 |
ttgttgtgagccaaattgagggtataaagggaacttgcgttgcggaatgttgaagaaatatttcctgtgaagttgttatttgagagt |
37711496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 26437679 - 26437767
Alignment:
| Q |
80 |
cattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatg |
168 |
Q |
| |
|
|||||||| |||||| | |||| | | ||| ||||| | |||||||||||| ||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
26437679 |
cattcctttaaagtttttgatgtacgttgtgggcaaagagccactaaaattattgttggagacatcaaaaaccctcaacttaggaaatg |
26437767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 26451048 - 26451136
Alignment:
| Q |
80 |
cattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatg |
168 |
Q |
| |
|
|||||||| |||||| | |||| | | ||| ||||| | |||||||||||| ||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
26451048 |
cattcctttaaagtttttgatgtacgttgtgggcaaagagccactaaaattattgttggagacatcaaaaaccctcaacttaggaaatg |
26451136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 39 - 541
Target Start/End: Original strand, 14552687 - 14553189
Alignment:
| Q |
39 |
cccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgttggcaaggtgccactaaaattgttgttag |
138 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552687 |
cccatgtattgcaaaccaatttggctgtcattcacgttcatcattccttgaaagttcttgatgcatgatgttggcaaggtgccactaaaattgttgttag |
14552786 |
T |
|
| Q |
139 |
agacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactc |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||| ||||||| ||| ||||||||| || || |||||||| |
|
|
| T |
14552787 |
agacatcaaaaattctcaacttaggaaatgaatgcttgatgctagaacaggtgattgctccgtgaagatgatttgatcgtaaacttagcacttgtaactc |
14552886 |
T |
|
| Q |
239 |
ttgtagagtttcaagccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagatatgaacagtgagacaaagactgtggtaat |
338 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||| ||| |||||||||| | |
|
|
| T |
14552887 |
ttgtagagtttctagccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttgaacagtgagccaatgactgtggtagt |
14552986 |
T |
|
| Q |
339 |
ggtccttccaattggtttccattcaactttatagtctgaaatgcatttcctttggaaaaggttttaggaatgcttccatagaggttgttcatttgcatat |
438 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14552987 |
ggtcctttcaattggtttccattcaactttatagtctcaaatgcatttccttttgaaaaggttctaggaatgattccatagaggttgttcatttgcatat |
14553086 |
T |
|
| Q |
439 |
ccaatacattaagagaagttaatgttcctaggcattgtggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgca |
538 |
Q |
| |
|
|||| | | ||| || ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||||| |
|
|
| T |
14553087 |
ccaaaatagagagaagaggaaatgtccccaggcattgtggaatcatacctgtcaaattgttgtgagccaaattgagcatataaagggaacttgcattgca |
14553186 |
T |
|
| Q |
539 |
gaa |
541 |
Q |
| |
|
||| |
|
|
| T |
14553187 |
gaa |
14553189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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