View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0606_low_21 (Length: 307)

Name: NF0606_low_21
Description: NF0606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0606_low_21
NF0606_low_21
[»] chr4 (46 HSPs)
chr4 (102-278)||(33753782-33753959)
chr4 (16-80)||(6957769-6957833)
chr4 (16-80)||(8286610-8286674)
chr4 (12-80)||(1793633-1793701)
chr4 (16-80)||(7947108-7947172)
chr4 (16-80)||(33227380-33227444)
chr4 (16-80)||(53707965-53708029)
chr4 (19-80)||(12494834-12494895)
chr4 (16-80)||(4441024-4441088)
chr4 (16-80)||(21237029-21237093)
chr4 (16-80)||(23906344-23906408)
chr4 (16-80)||(31959861-31959925)
chr4 (16-80)||(52569562-52569626)
chr4 (16-80)||(56375461-56375525)
chr4 (28-79)||(19154922-19154973)
chr4 (17-80)||(33190896-33190959)
chr4 (16-79)||(47265242-47265305)
chr4 (16-81)||(28236352-28236417)
chr4 (19-80)||(48622593-48622654)
chr4 (19-80)||(50679675-50679736)
chr4 (16-80)||(1777064-1777128)
chr4 (16-80)||(27450227-27450290)
chr4 (28-80)||(39708604-39708656)
chr4 (28-80)||(50287133-50287185)
chr4 (16-74)||(19969358-19969416)
chr4 (10-79)||(16003098-16003167)
chr4 (12-73)||(20601695-20601756)
chr4 (27-80)||(37773509-37773562)
chr4 (16-81)||(43434094-43434159)
chr4 (28-80)||(436400-436452)
chr4 (16-80)||(20192204-20192268)
chr4 (16-80)||(21528459-21528523)
chr4 (28-80)||(26037564-26037616)
chr4 (16-80)||(32479209-32479273)
chr4 (16-80)||(37798022-37798086)
chr4 (16-80)||(46582872-46582936)
chr4 (16-80)||(48174140-48174204)
chr4 (10-80)||(20591347-20591416)
chr4 (16-70)||(51811325-51811379)
chr4 (30-78)||(4548195-4548243)
chr4 (28-80)||(53518382-53518434)
chr4 (34-80)||(20821073-20821119)
chr4 (28-70)||(41729509-41729551)
chr4 (43-80)||(50862815-50862852)
chr4 (16-80)||(51421901-51421965)
chr4 (16-68)||(55388258-55388310)
[»] scaffold0024 (1 HSPs)
scaffold0024 (16-80)||(82889-82953)
[»] chr1 (31 HSPs)
chr1 (16-79)||(24020314-24020377)
chr1 (16-80)||(15086093-15086157)
chr1 (16-80)||(22090267-22090331)
chr1 (16-80)||(1210916-1210980)
chr1 (16-80)||(25979278-25979342)
chr1 (16-80)||(30202177-30202241)
chr1 (16-80)||(34792396-34792460)
chr1 (16-80)||(49347440-49347504)
chr1 (10-80)||(8672089-8672159)
chr1 (12-81)||(43240422-43240491)
chr1 (28-80)||(4707279-4707331)
chr1 (16-80)||(32231001-32231065)
chr1 (16-80)||(37311802-37311866)
chr1 (28-80)||(39318300-39318352)
chr1 (12-80)||(51440808-51440876)
chr1 (12-79)||(27520250-27520317)
chr1 (16-81)||(9592904-9592969)
chr1 (31-80)||(32079237-32079286)
chr1 (16-80)||(4001502-4001566)
chr1 (16-80)||(8391943-8392007)
chr1 (28-80)||(38807730-38807782)
chr1 (16-80)||(51602227-51602291)
chr1 (16-80)||(52921251-52921315)
chr1 (29-80)||(696440-696491)
chr1 (28-80)||(4029293-4029345)
chr1 (12-54)||(5113940-5113982)
chr1 (30-80)||(32082818-32082868)
chr1 (28-81)||(44905415-44905468)
chr1 (28-80)||(4415520-4415572)
chr1 (16-80)||(10200353-10200417)
chr1 (16-80)||(48865754-48865818)
[»] chr8 (23 HSPs)
chr8 (16-80)||(36545320-36545384)
chr8 (16-80)||(11523770-11523834)
chr8 (16-80)||(12491185-12491249)
chr8 (28-80)||(44529396-44529448)
chr8 (29-80)||(36395009-36395060)
chr8 (16-78)||(44047579-44047641)
chr8 (16-81)||(2027700-2027765)
chr8 (16-80)||(25473450-25473514)
chr8 (28-80)||(36565300-36565352)
chr8 (16-80)||(42469774-42469838)
chr8 (17-80)||(39947028-39947091)
chr8 (27-80)||(25300270-25300323)
chr8 (16-80)||(40813495-40813559)
chr8 (16-80)||(42854051-42854115)
chr8 (27-80)||(12025948-12026001)
chr8 (27-80)||(25288935-25288988)
chr8 (16-80)||(15215459-15215523)
chr8 (28-80)||(18125343-18125395)
chr8 (28-80)||(21121317-21121369)
chr8 (16-68)||(45419418-45419470)
chr8 (16-80)||(14742129-14742190)
chr8 (28-80)||(29520820-29520872)
chr8 (16-80)||(30559864-30559928)
[»] chr7 (40 HSPs)
chr7 (16-80)||(36869291-36869355)
chr7 (16-80)||(11594131-11594195)
chr7 (16-80)||(12841322-12841386)
chr7 (16-80)||(34869591-34869655)
chr7 (16-80)||(37618116-37618180)
chr7 (19-79)||(43491480-43491540)
chr7 (16-80)||(45836529-45836593)
chr7 (16-80)||(49029447-49029511)
chr7 (31-80)||(27648951-27649000)
chr7 (12-81)||(31859045-31859114)
chr7 (28-80)||(13859067-13859119)
chr7 (28-80)||(15682345-15682397)
chr7 (16-80)||(21078088-21078152)
chr7 (16-80)||(31682649-31682713)
chr7 (16-80)||(35906248-35906312)
chr7 (16-80)||(38900128-38900192)
chr7 (16-80)||(39906419-39906483)
chr7 (28-80)||(40979987-40980039)
chr7 (16-80)||(43281845-43281909)
chr7 (16-81)||(2885769-2885834)
chr7 (16-81)||(48919282-48919347)
chr7 (16-80)||(29650555-29650619)
chr7 (16-80)||(32631735-32631799)
chr7 (16-80)||(36652163-36652227)
chr7 (28-80)||(38607163-38607215)
chr7 (16-79)||(6375040-6375103)
chr7 (16-79)||(34035201-34035264)
chr7 (38-80)||(44855241-44855283)
chr7 (16-81)||(33349853-33349918)
chr7 (16-80)||(22349791-22349855)
chr7 (16-68)||(45601659-45601711)
chr7 (28-80)||(46355915-46355967)
chr7 (16-75)||(33073105-33073164)
chr7 (33-80)||(35559057-35559104)
chr7 (10-80)||(35922424-35922494)
chr7 (35-80)||(24598253-24598298)
chr7 (12-44)||(24777168-24777200)
chr7 (16-64)||(28208375-28208423)
chr7 (16-72)||(31681067-31681123)
chr7 (28-80)||(37976406-37976458)
[»] chr6 (19 HSPs)
chr6 (16-80)||(28085547-28085611)
chr6 (16-80)||(32756092-32756156)
chr6 (16-80)||(34143812-34143876)
chr6 (16-80)||(34156428-34156492)
chr6 (16-79)||(5081012-5081075)
chr6 (10-80)||(14030966-14031036)
chr6 (16-78)||(31819004-31819066)
chr6 (16-80)||(5631993-5632057)
chr6 (28-80)||(12890746-12890798)
chr6 (28-80)||(34934889-34934941)
chr6 (16-80)||(35043488-35043552)
chr6 (27-80)||(21351895-21351948)
chr6 (16-80)||(3206506-3206570)
chr6 (29-80)||(33497130-33497181)
chr6 (16-80)||(5258195-5258259)
chr6 (28-80)||(9706941-9706993)
chr6 (27-79)||(24665983-24666035)
chr6 (28-80)||(30031427-30031479)
chr6 (16-80)||(30679567-30679631)
[»] chr5 (28 HSPs)
chr5 (12-80)||(28976902-28976970)
chr5 (12-80)||(2075516-2075584)
chr5 (16-80)||(10639473-10639537)
chr5 (16-80)||(12492431-12492495)
chr5 (16-80)||(29816553-29816617)
chr5 (20-80)||(34273184-34273244)
chr5 (16-80)||(2915543-2915606)
chr5 (28-80)||(4496555-4496607)
chr5 (16-80)||(38685138-38685202)
chr5 (28-80)||(1287638-1287690)
chr5 (16-80)||(3302015-3302079)
chr5 (16-80)||(13561433-13561497)
chr5 (16-80)||(14911343-14911407)
chr5 (16-80)||(16913930-16913994)
chr5 (12-80)||(36215659-36215727)
chr5 (16-80)||(42504294-42504358)
chr5 (16-71)||(30213755-30213810)
chr5 (28-78)||(5558314-5558364)
chr5 (29-79)||(38501478-38501528)
chr5 (31-80)||(2552953-2553002)
chr5 (28-80)||(28053-28105)
chr5 (16-80)||(20456944-20457008)
chr5 (28-80)||(24178681-24178733)
chr5 (12-54)||(38657040-38657082)
chr5 (34-79)||(14665886-14665931)
chr5 (31-80)||(16347440-16347489)
chr5 (28-80)||(418093-418145)
chr5 (16-80)||(1275435-1275499)
[»] chr3 (32 HSPs)
chr3 (12-80)||(51447760-51447828)
chr3 (16-81)||(28245607-28245672)
chr3 (16-80)||(12096752-12096816)
chr3 (16-80)||(52138971-52139035)
chr3 (16-80)||(54279191-54279255)
chr3 (12-77)||(47233639-47233704)
chr3 (16-80)||(22243-22307)
chr3 (28-80)||(52156143-52156195)
chr3 (16-80)||(53262312-53262376)
chr3 (16-80)||(53519751-53519815)
chr3 (27-73)||(48953477-48953523)
chr3 (16-73)||(47555379-47555436)
chr3 (16-80)||(5169003-5169067)
chr3 (16-80)||(25191548-25191612)
chr3 (28-80)||(35033317-35033369)
chr3 (28-80)||(48508406-48508458)
chr3 (12-77)||(17022715-17022780)
chr3 (27-80)||(54422901-54422954)
chr3 (16-80)||(311356-311420)
chr3 (16-80)||(39600728-39600792)
chr3 (28-80)||(54128550-54128602)
chr3 (16-58)||(33271957-33271999)
chr3 (32-78)||(38060887-38060933)
chr3 (33-78)||(38431021-38431066)
chr3 (28-80)||(49042107-49042160)
chr3 (27-80)||(54425023-54425076)
chr3 (28-76)||(2133671-2133719)
chr3 (10-46)||(2195278-2195314)
chr3 (16-80)||(15296078-15296142)
chr3 (16-80)||(29601063-29601127)
chr3 (28-80)||(30294180-30294232)
chr3 (16-76)||(38850296-38850356)
[»] chr2 (30 HSPs)
chr2 (16-80)||(28508849-28508913)
chr2 (16-81)||(7326207-7326272)
chr2 (16-80)||(227360-227424)
chr2 (16-80)||(3866243-3866307)
chr2 (16-80)||(8180951-8181015)
chr2 (16-80)||(12734871-12734935)
chr2 (16-80)||(30306203-30306267)
chr2 (16-80)||(36183622-36183686)
chr2 (16-80)||(45367672-45367736)
chr2 (27-80)||(35643119-35643172)
chr2 (28-80)||(2610759-2610811)
chr2 (16-80)||(3243700-3243764)
chr2 (28-80)||(11992167-11992219)
chr2 (16-80)||(25834849-25834913)
chr2 (28-80)||(31959692-31959744)
chr2 (16-80)||(38430055-38430119)
chr2 (20-80)||(38452737-38452797)
chr2 (16-80)||(451695-451759)
chr2 (16-80)||(18424424-18424488)
chr2 (12-80)||(23997773-23997841)
chr2 (16-80)||(39029752-39029816)
chr2 (16-79)||(4807767-4807830)
chr2 (28-81)||(30743699-30743752)
chr2 (28-80)||(9496037-9496089)
chr2 (16-71)||(3635370-3635425)
chr2 (28-81)||(6237812-6237865)
chr2 (28-80)||(9996685-9996737)
chr2 (16-68)||(36616871-36616923)
chr2 (16-80)||(41197274-41197338)
chr2 (28-80)||(45543132-45543183)
[»] scaffold0157 (1 HSPs)
scaffold0157 (19-80)||(25582-25643)
[»] scaffold0570 (1 HSPs)
scaffold0570 (16-80)||(995-1059)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-80)||(31639-31703)
[»] scaffold0041 (1 HSPs)
scaffold0041 (16-80)||(16749-16813)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-80)||(4328-4392)
[»] scaffold1318 (1 HSPs)
scaffold1318 (16-80)||(502-566)
[»] scaffold0692 (1 HSPs)
scaffold0692 (28-80)||(4807-4859)
[»] scaffold0199 (1 HSPs)
scaffold0199 (28-80)||(14754-14806)
[»] scaffold0045 (1 HSPs)
scaffold0045 (16-80)||(86656-86720)


Alignment Details
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 33753782 - 33753959
Alignment:
Q  102 ataacagttttaataacaattaggggtcccataaagc--acttacggaattacatttactccataaaactgaaagtgaaagtgtcagatttgcaattttg 199  Q
    ||||||||||||| ||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33753782 ataacagttttaacaacaattaggggtcccaaaaagcgcacttacgaaattacatttactccataaaactgaaagtgaaagtgtcagatttgcaattttg 33753881  T
Q  200 cataaagccatattaacaataacagtactacagaaattgcaagtatggatttttattttcaaaagaactcatggcaatc 278  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  33753882 cataaagccatattaacaataacagtactacagaaattgaaagtatgg-tttttattttcaaaagagctcatggcaatc 33753959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 6957833 - 6957769
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  6957833 atcaaatgacgtcatagtgttctatcatacatcaaatttggatccaactcattgacctctaaatc 6957769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 8286674 - 8286610
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8286674 atcaaatgacgtcatagtgttctatcataaaccaaatttggatccaactcattgacctctaaatc 8286610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 1793701 - 1793633
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||| || |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  1793701 atgaatcaaattacgtcatagtgctctatcataaatcatatttggatccaactcattgacctctaaatc 1793633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 7947172 - 7947108
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  7947172 atcaaattacatgatagtgttctatcataaatcaaatttggatccaactgattgacctctaaatc 7947108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 33227444 - 33227380
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  33227444 atcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 33227380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 53708029 - 53707965
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  53708029 atcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 53707965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 12494895 - 12494834
Alignment:
Q  19 aaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  12494895 aaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 12494834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 4441088 - 4441024
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  4441088 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 4441024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 21237093 - 21237029
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  21237093 atcaaatgacgccatagtgttctatcatataccaaatttggatccaactcattgacctctaaatc 21237029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 23906344 - 23906408
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  23906344 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 23906408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 31959861 - 31959925
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  31959861 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 31959925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 52569562 - 52569626
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  52569562 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 52569626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 56375525 - 56375461
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||| | |||||||||||| |||||||| |||||||||||    
T  56375525 atcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattcacctctaaatc 56375461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 19154922 - 19154973
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  19154922 catagtgttctatcataaaccaaatttggatccaactcattgacctctaaat 19154973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 33190896 - 33190959
Alignment:
Q  17 tcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||| |||||||||||||||||| | |||||||||||  ||||||||||||||||||||    
T  33190896 tcaaatgacgtcatagtgttctatcatacaccaaatttggattcaactcattgacctctaaatc 33190959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 47265242 - 47265305
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||| |||  |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  47265242 atcaaattacactatagtgttctatcatagatcaaatttggatccaactcattgacctctaaat 47265305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 28236417 - 28236352
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||| ||| |||| | |||||||||||| |||||||||||| |||||||||||||||||||||    
T  28236417 atcaaattacaccataatattctatcataaaccaaatttggatccaactcattgacctctaaatca 28236352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 48622593 - 48622654
Alignment:
Q  19 aaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  48622593 aaatgacgccatagtgttctatcatacaccaaatttggatcaaactcattgacctctaaatc 48622654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 50679736 - 50679675
Alignment:
Q  19 aaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||||||| || ||||||||| |||||||||||| ||||||||||||||||||||    
T  50679736 aaatgacgtcatagtattttatcataaaccaaatttggatccaactcattgacctctaaatc 50679675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 1777064 - 1777128
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||| |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  1777064 atcaaatgacgccatactgttctatcatacaccaaatttggatccaactcattgacctctaaatc 1777128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 27450227 - 27450290
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  27450227 atcaaatgacgccatagtgttctatca-aaatcatatttggatccaactcattgacctctaaatc 27450290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 39708656 - 39708604
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  39708656 catagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 39708604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 50287185 - 50287133
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  50287185 catagtgttctatcatacatcaaatttagatccaactcattgacctctaaatc 50287133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19969416 - 19969358
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctc 74  Q
    ||||||||||  ||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  19969416 atcaaatgacgccatagcgttctatcataaaccaaatttggatccaactcattgacctc 19969358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 16003167 - 16003098
Alignment:
Q  10 atatgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||| || |||| || |||||||||| |||||||||||| |||| |||| |||||||||||||||||||    
T  16003167 atatggattaaattacgtcatagtgttttatcataaatcatatttagatccaactcattgacctctaaat 16003098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 20601695 - 20601756
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacct 73  Q
    ||||||||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||||    
T  20601695 atgaatcaaattacgtcataatgttctatcataaatcatatttgaatccaactcattgacct 20601756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 37773509 - 37773562
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||| |||||    
T  37773509 tcatagtgttctatcataaaccaaatctggatccaactcattgacctccaaatc 37773562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 43434159 - 43434094
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||  | |||||||||||| || ||||||||||||||  ||||||||||||||||||||    
T  43434159 atcaaatgacgccgtagtgttctatcctacatcaaatttggatccgactcattgacctctaaatca 43434094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 436452 - 436400
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| | |||||||||||  ||||||||||||||||||||    
T  436452 catagtgttctatcatacaccaaatttggattcaactcattgacctctaaatc 436400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 20192268 - 20192204
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| || ||||| |||||||||||| |||||||||||||| ||| || |||||||||||||    
T  20192268 atcaaataacgtcataatgttctatcatacatcaaatttggatccaacccactgacctctaaatc 20192204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 21528523 - 21528459
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||| || ||||||||||||||| ||| || ||||| ||| ||||||||||||||||||||    
T  21528523 atcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcattgacctctaaatc 21528459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 26037564 - 26037616
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||| |||||||| |||||||||||    
T  26037564 catagtgttctatcataaaccatatttggatccaactcattcacctctaaatc 26037616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 32479273 - 32479209
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || |||| |||| ||||||||||||||||||||    
T  32479273 atcaaatgacgccatagtgttctatcaaaaaccatattttgatccaactcattgacctctaaatc 32479209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 37798086 - 37798022
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| ||||| |||||||||||||| || ||||||||  ||||||||||| ||||||||    
T  37798086 atcaaatgacgtcatattgttctatcataaaccatatttggattcaactcattgacttctaaatc 37798022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 46582872 - 46582936
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||| ||||||||||| | |||||||||||| ||||||||||||| ||||||    
T  46582872 atcaaatgacgccatagggttctatcatacaccaaatttggatccaactcattgacctttaaatc 46582936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 48174140 - 48174204
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||| |||| ||||||| | |||||||||||| ||||||||||||||||||||    
T  48174140 atcaaatgacgccataatgttttatcatacaccaaatttggatccaactcattgacctctaaatc 48174204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 20591347 - 20591416
Alignment:
Q  10 atatgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||| || |||| |||||||||||| || || ||||| ||| ||||||||||||||||||||    
T  20591347 atatgaatcaaattacgtcattgtgttctatcat-aaccatatttgaatccaactcattgacctctaaatc 20591416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 51811325 - 51811379
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattga 70  Q
    |||||||||| |||||||||||||||| ||| || ||||||||| ||||||||||    
T  51811325 atcaaatgacgtcatagtgttctatcaaaaaccatatttggatcaaactcattga 51811379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 4548243 - 4548195
Alignment:
Q  30 tagtgttctatcataaatcaaatttggatctaactcattgacctctaaa 78  Q
    ||||||||||||||||| ||||||| |||| |||| |||||||||||||    
T  4548243 tagtgttctatcataaaccaaatttagatccaacttattgacctctaaa 4548195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 53518382 - 53518434
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || |||| |||| |||||||| |||||||||||    
T  53518382 catagtgttctatcataaaccatatttagatccaactcattaacctctaaatc 53518434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 20821073 - 20821119
Alignment:
Q  34 gttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||| ||||| ||| ||||||||||||| ||||||    
T  20821073 gttctatcataaatcatatttgaatccaactcattgacctttaaatc 20821119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 41729509 - 41729551
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattga 70  Q
    ||||||||||||||||||| || ||||||||| ||||||||||    
T  41729509 catagtgttctatcataaaccatatttggatccaactcattga 41729551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 50862852 - 50862815
Alignment:
Q  43 taaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  50862852 taaaccaaatttggatccaactcattgacctctaaatc 50862815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 51421965 - 51421901
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| || ||||| |||||||||||||| ||  |||||||| || ||||| |||||||||||    
T  51421965 atcaaattacgtcataatgttctatcataaaccatttttggatccaattcattaacctctaaatc 51421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 55388258 - 55388310
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcatt 68  Q
    ||||||| ||| || | ||||||||||||||||| |||| |||||||||||||    
T  55388258 atcaaattacaccacaatgttctatcataaatcatatttcgatctaactcatt 55388310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 82953 - 82889
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  82953 atcaaatgacgtcatagtgttctatcataaatcatatttggatccaactcattgacctctaaatc 82889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 24020314 - 24020377
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24020314 atcaaatgacgccatagtgttctatcataaatcaaatttggatccaactcattgacctctaaat 24020377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 15086157 - 15086093
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  15086157 atcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcattgacctctaaatc 15086093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 22090331 - 22090267
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  22090331 atcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 22090267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 1210980 - 1210916
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  1210980 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 1210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 25979278 - 25979342
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  25979278 atcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 25979342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 30202177 - 30202241
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  30202177 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 30202241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 34792396 - 34792460
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  34792396 atcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattgacctttaaatc 34792460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 49347440 - 49347504
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  49347440 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 49347504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 8672159 - 8672089
Alignment:
Q  10 atatgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||| ||||||||||   |||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  8672159 atatggatcaaatgacgctatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 8672089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 43240422 - 43240491
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||| | |||||||    
T  43240422 atgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacatataaatca 43240491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 4707279 - 4707331
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  4707279 catagtgttctatcataaaccaaatttggatccaactcattaacctctaaatc 4707331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 32231001 - 32231065
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||| ||||||||||||||||| | ||| |||||||| ||||||||||||||||||||    
T  32231001 atcaaattacaccatagtgttctatcatagaccaactttggatccaactcattgacctctaaatc 32231065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 37311802 - 37311866
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  37311802 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 37311866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 39318352 - 39318300
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  39318352 catagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 39318300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 51440808 - 51440876
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||  | ||||||||||||||| | |||||||||||| ||||||||||||| ||||||    
T  51440808 atgaatcaaatgacgccgtagtgttctatcatacaccaaatttggatccaactcattgacctataaatc 51440876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 27520250 - 27520317
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||| | |||||| | ||||||||    
T  27520250 atgaatcaaattacatcataatgttctatcataaatcatatttggatccagctcattaatctctaaat 27520317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 9592969 - 9592904
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||   |||||||||||||||| | |||||||  |||||||||||||||||||||||||    
T  9592969 atcaaatgacgctatagtgttctatcatacaccaaatttaaatctaactcattgacctctaaatca 9592904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 32079237 - 32079286
Alignment:
Q  31 agtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  32079237 agtgttctatcataaaccagatttggatccaactcattgacctctaaatc 32079286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 4001502 - 4001566
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||  |||||| ||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  4001502 atcaaatgatgtcatagggttctatcaaaaaccatatttggatccaactcattgacctctaaatc 4001566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 8392007 - 8391943
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||||| |||||||| |||||| ||||||||| |||| |||||||||||||||    
T  8392007 atcaaatgacgccatagtattctatcaaaaatcatatttggatccaacttattgacctctaaatc 8391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 38807730 - 38807782
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||| ||||| ||||||||||||||    
T  38807730 catagtgttctatcataaaccatatttggatccaactcgttgacctctaaatc 38807782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 51602291 - 51602227
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||  |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  51602291 atcaaatgacgccatgatgttctatcatacaccaaatttggatccaactcattgacctctaaatc 51602227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 52921315 - 52921251
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||   |||||||||||||||||| || ||||||||| || |||||||||||||||||    
T  52921315 atcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcattgacctctaaatc 52921251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 696491 - 696440
Alignment:
Q  29 atagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  696491 atagtgttctatcaaaaaccatatttggatcaaactcattgacctctaaatc 696440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4029345 - 4029293
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||| ||||||| | |||||||||||| ||||||||||||| ||||||    
T  4029345 catagtgttatatcatacaccaaatttggatccaactcattgacctttaaatc 4029293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 5113982 - 5113940
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaattt 54  Q
    |||||||||||||| |||||||||||||||||| | |||||||    
T  5113982 atgaatcaaatgacgtcatagtgttctatcatacaccaaattt 5113940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 32082818 - 32082868
Alignment:
Q  30 tagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||| ||| || ||||| ||| ||||||||||||||||||||    
T  32082818 tagtgttctatcaaaaaccatatttgaatccaactcattgacctctaaatc 32082868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 44905415 - 44905468
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||||| ||||| || ||||||||| |||||||| |||| |||||||    
T  44905415 catagtgttctatgataaaccatatttggatcaaactcattaacctataaatca 44905468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4415572 - 4415520
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||| | |||||| |||| |||| ||||||||||||||||||||    
T  4415572 cataatgttctataaaaaatcatatttagatccaactcattgacctctaaatc 4415520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 10200353 - 10200417
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||| |||  |||||||||||||| || ||||||||| ||||||| || |||||||||    
T  10200353 atcaaattacaccatgatgttctatcataaaccatatttggatccaactcatcgatctctaaatc 10200417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 48865754 - 48865818
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||| |||| | |||||||||||| || || ||||||||| ||||| |||||||||||    
T  48865754 atcaaattacaccataatattctatcataaaccatatctggatctaattcattaacctctaaatc 48865818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 36545384 - 36545320
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  36545384 atcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 36545320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 11523770 - 11523834
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  11523770 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 11523834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 12491185 - 12491249
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  12491185 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 12491249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 44529448 - 44529396
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  44529448 catagtgttctatcataaaccaaatttggatccaactcattgacctctaaatc 44529396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 36395009 - 36395060
Alignment:
Q  29 atagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  36395009 atagtgttctatcatacaccaaatttggatctaactcattgacctctaaatc 36395060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 44047579 - 44047641
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaa 78  Q
    ||||||||||  ||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  44047579 atcaaatgacgccatggtgttctatcataaaccaaatttggatccaactcattgacctctaaa 44047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 2027765 - 2027700
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    |||||||| | |||||||||||||||||||| || ||||| || ||||||||||||||||||||||    
T  2027765 atcaaatggcgtcatagtgttctatcataaaccatatttgaatataactcattgacctctaaatca 2027700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 25473450 - 25473514
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||   |||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  25473450 atcaaatgacgctatagtgttctatcatacaccaaatttggatcaaactcattgacctctaaatc 25473514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 36565300 - 36565352
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  36565300 catagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 36565352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 42469774 - 42469838
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  42469774 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 42469838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 39947091 - 39947028
Alignment:
Q  17 tcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||  ||||| ||||||||||||| |||||||||||  ||||||||||||||||||||    
T  39947091 tcaaatgacgccatagcgttctatcataaaccaaatttggattcaactcattgacctctaaatc 39947028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 25300323 - 25300270
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| ||||||||| || ||||||||| ||||||||||||||||||||    
T  25300323 tcatagtgttatatcataaaccatatttggatccaactcattgacctctaaatc 25300270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 40813559 - 40813495
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||  |||||||||||||||| | | |||||||||||| |||||| |||||||||||||    
T  40813559 atcaaatgatgtcatagtgttctatcacacaccaaatttggatccaactcactgacctctaaatc 40813495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 42854051 - 42854115
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||| ||||| ||| || ||||||||| ||||||||||||||||||||    
T  42854051 atcaaatgacgccatagtgttatatcaaaaaccatatttggatccaactcattgacctctaaatc 42854115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 12026001 - 12025948
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||| ||| || ||||||||| |||| |||||||||||||||    
T  12026001 tcatagtgttctatcaaaaaccatatttggatccaacttattgacctctaaatc 12025948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 25288988 - 25288935
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||| ||| ||||||||| || ||||||||| ||||||||||||||||||||    
T  25288988 tcatagagttatatcataaaccatatttggatccaactcattgacctctaaatc 25288935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 15215459 - 15215523
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| ||||| |||||||||||||| | ||| || ||||||||| |||||||||| |||||||||    
T  15215459 atcatatgacgtcatagtgttctattaaaaaccatatttggatcaaactcattgatctctaaatc 15215523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 18125395 - 18125343
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||| | ||||||    
T  18125395 catagtattctatcataaatcatatttggatccaactcattgacttttaaatc 18125343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 21121369 - 21121317
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||| ||||| ||||||||||| ||||||||    
T  21121369 catagtgttctatcataaaccatattaggatccaactcattgacttctaaatc 21121317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 45419470 - 45419418
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcatt 68  Q
    ||||||| ||| |||| |||||||||||||| |||||||||||| ||||||||    
T  45419470 atcaaattacaccataatgttctatcataaaccaaatttggatcaaactcatt 45419418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 14742129 - 14742190
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||||   ||||||||| ||||||||||| ||||||||    
T  14742129 atcaaatgacgccatagtgttctatcaaaaat---atttggatccaactcattgacttctaaatc 14742190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 29520872 - 29520820
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||||||| || ||||||||| |||||||| | |||||||||    
T  29520872 cataatgttctatcataaaccatatttggatccaactcattaatctctaaatc 29520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 30559928 - 30559864
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| || ||||| |||||||||||||| || || |||||| |||||||| | |||||||||    
T  30559928 atcaaattacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaaatc 30559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 36869291 - 36869355
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  36869291 atcaaatgacgccatagtgttctatcataaatcaaatttgaatctaactcattgacatctaaatc 36869355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 11594195 - 11594131
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  11594195 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 11594131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 12841322 - 12841386
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  12841322 atcaaatgacgccatagtgttctatcataaaccaaatttggatacaactcattgacctctaaatc 12841386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 34869655 - 34869591
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  34869655 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 34869591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 37618180 - 37618116
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||| ||||||||||||||||| | |||||||||||| |||| |||||||||||||||    
T  37618180 atcaaatgacaccatagtgttctatcatacaccaaatttggatccaacttattgacctctaaatc 37618116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 43491540 - 43491480
Alignment:
Q  19 aaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  43491540 aaattacatcatagtgttctatcataaatcatatttggatccaacttattgacctctaaat 43491480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 45836529 - 45836593
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  45836529 atcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 45836593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 49029511 - 49029447
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  49029511 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 49029447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 27649000 - 27648951
Alignment:
Q  31 agtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  27649000 agtgttctatcataaaccaaatttggatccaactcattgacctctaaatc 27648951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 31859114 - 31859045
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||| |  |||||||||||||| |||||| ||||||||||| ||||||||||| |||||||||    
T  31859114 atgaatcaaattatgtcatagtgttctattataaattaaatttggatccaactcattgacttctaaatca 31859045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 13859067 - 13859119
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  13859067 catagtgttctatcataaaccaaatttggatccaactcattggcctctaaatc 13859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 15682397 - 15682345
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  15682397 catagtgttctatcataaatcatatttggatccaacttattgacctctaaatc 15682345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 21078152 - 21078088
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||| |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  21078152 atcaaatgacgccataatgttctatcatacaccaaatttggatccaactcattgacctctaaatc 21078088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 31682649 - 31682713
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||| ||||| |||||| || |||||||||||||||||    
T  31682649 atcaaatgacgccatagtgttctatcataaaccaaatatggatccaattcattgacctctaaatc 31682713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 35906248 - 35906312
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| |||||||||||||| |||||    
T  35906248 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctcgaaatc 35906312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 38900192 - 38900128
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||||||||| |||||| | |||||||||||| ||||||||||||||||||||    
T  38900192 atcaaatgacgccatagtgttcaatcatacaccaaatttggatccaactcattgacctctaaatc 38900128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 39906419 - 39906483
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| || |||||||||||||||||    
T  39906419 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcattgacctctaaatc 39906483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 40979987 - 40980039
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  40979987 catagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 40980039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 43281909 - 43281845
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  43281909 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 43281845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 2885769 - 2885834
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||| ||| ||||||||||||||||||| || |||||| || |||||||||||| ||||||||    
T  2885769 atcaaattacaccatagtgttctatcataaaccatatttgggtccaactcattgaccactaaatca 2885834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 48919347 - 48919282
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||  ||||||| | ||||||||| || ||||||||| |||||||||||||||||||||    
T  48919347 atcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcattgacctctaaatca 48919282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 29650619 - 29650555
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  | ||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  29650619 atcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaactcattgacctctaaatc 29650555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 32631799 - 32631735
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||| ||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  32631799 atcaaatgacgccatagcgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 32631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 36652227 - 36652163
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||  ||||||||||||||| ||||    
T  36652227 atcaaatgacgccatagtgttctatcatacaccaaatttggattcaactcattgacctctgaatc 36652163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 38607215 - 38607163
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  38607215 catagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 38607163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 6375103 - 6375040
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||||||  ||||||||||||||||| |  ||||||||||| |||||| ||||||||||||    
T  6375103 atcaaatgacgccatagtgttctatcatacactaaatttggatccaactcactgacctctaaat 6375040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 34035201 - 34035264
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||||||  |||||||||||||||| || || ||||||||| |||||||||| ||||||||    
T  34035201 atcaaatgacgccatagtgttctatcatgaaccatatttggatccaactcattgatctctaaat 34035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 44855241 - 44855283
Alignment:
Q  38 tatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  44855241 tatcataaaccaaatttggatccaactcattgacctctaaatc 44855283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 33349853 - 33349918
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||   |||||||||||  ||| | |||||||||||| |||||||||||||||||||||    
T  33349853 atcaaatgacgctatagtgttctactatacaccaaatttggatccaactcattgacctctaaatca 33349918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 22349855 - 22349791
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||||| |||||||||| | |||||||||||| |||| |||||||| ||||||    
T  22349855 atcaaatgacgccatagtattctatcatataccaaatttggatccaacttattgacctttaaatc 22349791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 45601711 - 45601659
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcatt 68  Q
    ||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||    
T  45601711 atcaaattacaccatagtgttctatcataaatcatattttgatccaactcatt 45601659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 46355915 - 46355967
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| | || ||||||||| ||||||||||||| ||||||    
T  46355915 catagtgttctatcatacaccagatttggatccaactcattgacctttaaatc 46355967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 33073164 - 33073105
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctct 75  Q
    |||||||||| ||||| |||| ||| ||| | |||||||||||| |||||||||||||||    
T  33073164 atcaaatgacgtcatattgttttattatacaccaaatttggatccaactcattgacctct 33073105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 35559057 - 35559104
Alignment:
Q  33 tgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||||||  ||||||||||| ||||||||||||||||||||    
T  35559057 tgttctaccataaactaaatttggatccaactcattgacctctaaatc 35559104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 35922494 - 35922424
Alignment:
Q  10 atatgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||| ||||||| |  ||||| ||||||||||||||||| |||| |||  |||||||| |||||||||||    
T  35922494 atatggatcaaattaggtcataatgttctatcataaatcatatttagattcaactcattaacctctaaatc 35922424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 24598253 - 24598298
Alignment:
Q  35 ttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||| |||||| ||||||||  ||||||||||||||||||||    
T  24598253 ttctatcaaaaatcatatttggattcaactcattgacctctaaatc 24598298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 24777200 - 24777168
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcata 44  Q
    |||||||||||||| ||||||||||||||||||    
T  24777200 atgaatcaaatgacgtcatagtgttctatcata 24777168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 28208375 - 28208423
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaact 64  Q
    ||||||||||  ||||||||||||||||||| || ||||||||| ||||    
T  28208375 atcaaatgacgccatagtgttctatcataaaccatatttggatccaact 28208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 31681067 - 31681123
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacc 72  Q
    ||||||| || ||||||| |||||||||||  || ||||||||| ||||||||||||    
T  31681067 atcaaattacgtcatagtattctatcataagccatatttggatccaactcattgacc 31681123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 37976458 - 37976406
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||||||| || ||||||||| |||||||| | |||||||||    
T  37976458 cataatgttctatcataaaccatatttggatccaactcattaatctctaaatc 37976406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 28085611 - 28085547
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  28085611 atcaaatgacaccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 28085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 32756156 - 32756092
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  32756156 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 32756092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 34143812 - 34143876
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  34143812 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 34143876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 34156428 - 34156492
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  34156428 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 34156492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 5081075 - 5081012
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  5081075 atcaaatgacgttatagtgttctatcataaatcatatttgtatccaactcattgacctctaaat 5081012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 14031036 - 14030966
Alignment:
Q  10 atatgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||| |||||||||| | ||||| |||||||| |||||| ||||||||||||| ||||||||||||||||    
T  14031036 atatggatcaaatgacgttatagtattctatcaaaaatcatatttggatctaacccattgacctctaaatc 14030966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 31819066 - 31819004
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaa 78  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  31819066 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa 31819004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 5632057 - 5631993
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||| ||||| ||| || ||||||||| ||||||||||||||||||||    
T  5632057 atcaaatgacgtcatagtgttatatcaaaaaccatatttggatccaactcattgacctctaaatc 5631993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 12890798 - 12890746
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  12890798 catagtgttctatcataaaccatatttggatctaactcattgacgtctaaatc 12890746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 34934889 - 34934941
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  34934889 catagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 34934941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 35043488 - 35043552
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||| ||| || ||||||||| ||| ||||||||||||||||    
T  35043488 atcaaatgacgtcatagtgttctatcaaaaaccatatttggatccaacacattgacctctaaatc 35043552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 21351895 - 21351948
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||| |||||| ||||||||| | ||||||||||||||||||    
T  21351895 tcatagtgttctatcaaaaatcatatttggatccagctcattgacctctaaatc 21351948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 3206506 - 3206570
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||| | ||| || ||||||||| ||||||||||||||||||||    
T  3206506 atcaaatgacgccatagtgttctattaaaaaccatatttggatccaactcattgacctctaaatc 3206570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 33497181 - 33497130
Alignment:
Q  29 atagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||| ||||||    
T  33497181 atagtgttatatcataaatcatatttggatccaactcattgacctttaaatc 33497130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 5258195 - 5258259
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||||||||  |||| ||| || ||||||||||| ||||||||||||||||||    
T  5258195 atcaaatgacgccatagtgtttaatcaaaaaccatatttggatctagctcattgacctctaaatc 5258259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 9706993 - 9706941
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||| ||| || ||||||||| |||||||| |||||||||||    
T  9706993 catagtgttctatcaaaaaccatatttggatccaactcattaacctctaaatc 9706941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 24666035 - 24665983
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||| |||||||||||||| || |||| |||| |||||||||||||||||||    
T  24666035 tcataatgttctatcataaaccatatttcgatccaactcattgacctctaaat 24665983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 30031479 - 30031427
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||  ||| ||||||||||||||||||||    
T  30031479 catagtgttctatcataaaccatatttaaatccaactcattgacctctaaatc 30031427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 30679631 - 30679567
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| | ||| |||||||||||| | | |||||||||| |||| |||||| ||||||||    
T  30679631 atcaaatgacgttataatgttctatcatagaccgaatttggatccaacttattgacttctaaatc 30679567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 28976902 - 28976970
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  28976902 atgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 28976970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 2075516 - 2075584
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||  |||||| |||||||||| | |||||||||||| ||||||||||||||||||||    
T  2075516 atgaatcaaatgacgccatagtattctatcatacaccaaatttggatccaactcattgacctctaaatc 2075584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 10639537 - 10639473
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  10639537 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 10639473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 12492431 - 12492495
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  12492431 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 12492495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 29816617 - 29816553
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  29816617 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 29816553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 34273244 - 34273184
Alignment:
Q  20 aatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  34273244 aatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 34273184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 2915543 - 2915606
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  2915543 atcaaatgacgccatagtgttctatcataac-caaatttggatccaactcattgacctctaaatc 2915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4496607 - 4496555
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  4496607 catagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 4496555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 38685202 - 38685138
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||| |||||||||||||| || ||||||||| ||||||||||||||||||||    
T  38685202 atcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctctaaatc 38685138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 1287638 - 1287690
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  1287638 catagtgtactatcatacaccaaatttggatccaactcattgacctctaaatc 1287690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 3302079 - 3302015
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  | ||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  3302079 atcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 3302015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 13561433 - 13561497
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || | ||||||| ||||||||||||||||||||    
T  13561433 atcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcattgacctctaaatc 13561497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 14911407 - 14911343
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||||| |||||||| |||||| ||||||||| |||||||| |||||||||||    
T  14911407 atcaaatgacgccatagtattctatcaaaaatcatatttggatccaactcattaacctctaaatc 14911343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 16913930 - 16913994
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||| |||||||||| |||| || ||||||||| ||||||||||||||||||||    
T  16913930 atcaaatgacgccatggtgttctatcgtaaaccatatttggatccaactcattgacctctaaatc 16913994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 36215727 - 36215659
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||| |||||||||||||||||||||| |||  |||||||  || | |||||||||||||||    
T  36215727 atgaatcaaatcacatcatagtgttctatcataagtcatgtttggattcaattaattgacctctaaatc 36215659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 42504294 - 42504358
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| || ||||| |||||||||||||| || |||||||| |||||||||||| ||||||||    
T  42504294 atcaaattacgtcataatgttctatcataaaccatatttggatataactcattgacatctaaatc 42504358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 30213810 - 30213755
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgac 71  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| |||||||||||    
T  30213810 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgac 30213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 5558364 - 5558314
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaa 78  Q
    ||||||||||||||||||| || |||||||||  |||||||||||||||||    
T  5558364 catagtgttctatcataaaccatatttggatcctactcattgacctctaaa 5558314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 38501478 - 38501528
Alignment:
Q  29 atagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||| ||||||||||||||| ||||||||| |||| ||||||||||||||    
T  38501478 atagttttctatcataaatcatatttggatccaacttattgacctctaaat 38501528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 2553002 - 2552953
Alignment:
Q  31 agtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||| | |||||||||||| ||||||||||| ||||||||    
T  2553002 agtgttctatcatacaccaaatttggatccaactcattgacatctaaatc 2552953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 28105 - 28053
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||| |||||| ||||||||| |||| ||| |||||||||||    
T  28105 catagtgttctatcagaaatcatatttggatccaacttattaacctctaaatc 28053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 20457008 - 20456944
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||| |||||||||||| ||||||||| |||  |||| |||||||||||||||    
T  20457008 atcaaatgacgccataatgttctatcatacatcaaatttagattcaacttattgacctctaaatc 20456944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 24178733 - 24178681
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| |  ||||||||||| |||||||||| |||||||||    
T  24178733 catagtgttctatcatacactaaatttggatccaactcattgaactctaaatc 24178681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 38657082 - 38657040
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaattt 54  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||    
T  38657082 atgaatcaaacgacatcataatgttctatcataaatcatattt 38657040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 14665931 - 14665886
Alignment:
Q  34 gttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||||||||| || ||||||||| ||||||||||| |||||||    
T  14665931 gttctatcataaaccatatttggatccaactcattgacttctaaat 14665886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 16347440 - 16347489
Alignment:
Q  31 agtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||| || ||||| ||| || |||||||||||||||||    
T  16347440 agtgttctatcataaaccatatttgtatccaaatcattgacctctaaatc 16347489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 418093 - 418145
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||||||| || ||||||||| |||||||| | |||||||||    
T  418093 cataatgttctatcataaaccacatttggatccaactcattaatctctaaatc 418145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 1275499 - 1275435
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| ||||| |||||||||| | | |||||||||||  |||| ||| |||||||||||    
T  1275499 atcaaatgacgtcataatgttctatcaaacaccaaatttggattcaactgattaacctctaaatc 1275435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 51447760 - 51447828
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  51447760 atgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 51447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 28245672 - 28245607
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    |||||||||| |||||||||||||| ||| | |||||||||||| |||||||||||||||||||||    
T  28245672 atcaaatgacgtcatagtgttctattatacaccaaatttggatccaactcattgacctctaaatca 28245607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 12096752 - 12096816
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  12096752 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 12096816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 52139035 - 52138971
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| || |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  52139035 atcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 52138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 54279255 - 54279191
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  54279255 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 54279191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 47233639 - 47233704
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaa 77  Q
    ||||||||||||||  ||||||||||||||| ||| || |||||||||||| ||||||||||||||    
T  47233639 atgaatcaaatgacgccatagtgttctatcaaaaaccatatttggatctaattcattgacctctaa 47233704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 22307 - 22243
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  22307 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 22243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 52156143 - 52156195
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  52156143 catagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 52156195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 53262376 - 53262312
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  53262376 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 53262312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 53519815 - 53519751
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||| ||| |  ||||||||| ||||||||||||||||||||    
T  53519815 atcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcattgacctctaaatc 53519751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 48953477 - 48953523
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacct 73  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  48953477 tcatagtgttctatcataaatcatatttggatccaactcattgacct 48953523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 47555379 - 47555436
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacct 73  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| |||||||||||||    
T  47555379 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacct 47555436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 5169067 - 5169003
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||| ||||||    
T  5169067 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctataaatc 5169003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 25191612 - 25191548
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || |||| ||||||| |||||||||||||||||    
T  25191612 atcaaatgacgccatagtgttctatcaaaaaccatattttgatctaattcattgacctctaaatc 25191548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 35033369 - 35033317
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  35033369 catagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 35033317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 48508458 - 48508406
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||| ||| ||||||||||||||||||||    
T  48508458 catagtgttctatcataaaccatatttgaatccaactcattgacctctaaatc 48508406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 17022715 - 17022780
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaa 77  Q
    |||||| |||||||| |||| | ||||||||||||  ||| ||||||| |||||||||||||||||    
T  17022715 atgaattaaatgacaccataatattctatcataaactaaaattggatccaactcattgacctctaa 17022780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 54422901 - 54422954
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| |||||| ||||| || ||||||||| ||||||||||||||||||||    
T  54422901 tcatagttttctataataaaccatatttggatccaactcattgacctctaaatc 54422954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 311356 - 311420
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || || |||||| |||| |||||||||||||||    
T  311356 atcaaatgacgccatagtgttctatcaaaaaccatatctggatccaactaattgacctctaaatc 311420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 39600728 - 39600792
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||| |||| ||||||||| |||| || ||||||||| |||||||| |||||||||||    
T  39600728 atcaaattacaccataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatc 39600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 54128602 - 54128550
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||||||| || |||||| || ||||||||||||||||||||    
T  54128602 cataatgttctatcataaaccatatttgggtccaactcattgacctctaaatc 54128550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 33271957 - 33271999
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggat 58  Q
    |||||||||| |||||||||||||||||| | |||||||||||    
T  33271957 atcaaatgacgtcatagtgttctatcatacaccaaatttggat 33271999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 38060933 - 38060887
Alignment:
Q  32 gtgttctatcataaatcaaatttggatctaactcattgacctctaaa 78  Q
    ||||||||||||||| || ||||||||| ||||||||||| ||||||    
T  38060933 gtgttctatcataaaccatatttggatccaactcattgacttctaaa 38060887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 38431066 - 38431021
Alignment:
Q  33 tgttctatcataaatcaaatttggatctaactcattgacctctaaa 78  Q
    |||||||||||||| || ||||||||| |||||||| |||||||||    
T  38431066 tgttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 49042160 - 49042107
Alignment:
Q  28 catagtgttctatcataaatcaa-atttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| | | ||||||||| |||||||| |||||||||||    
T  49042160 catagtgttctatcataaaaccatatttggatccaactcattaacctctaaatc 49042107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 54425023 - 54425076
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| |||||| ||||| || ||||||||| ||| ||||||||||||||||    
T  54425023 tcatagttttctataataaaccatatttggatccaacccattgacctctaaatc 54425076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 2133671 - 2133719
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctcta 76  Q
    |||||||||||||||||||  | ||||||||  ||||||||||||||||    
T  2133671 catagtgttctatcataaactatatttggattcaactcattgacctcta 2133719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 2195314 - 2195278
Alignment:
Q  10 atatgaatcaaatgacatcatagtgttctatcataaa 46  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  2195314 atatgaatcaaattacatcataatgttctatcataaa 2195278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 15296142 - 15296078
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||| |||| |||||||||  |||||| ||||||||| || ||||| |||||||||||    
T  15296142 atcaaattacaccataatgttctatccgaaatcatatttggatccaattcattaacctctaaatc 15296078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 29601127 - 29601063
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| |||||||| ||||||||||||||  | ||||| ||| |||||||| | |||||||||    
T  29601127 atcaaattacatcataatgttctatcataaactatatttgaatccaactcattaatctctaaatc 29601063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 30294180 - 30294232
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||| |||||||||||| | || |||| ||||||||||||| ||||||    
T  30294180 catagtgttttatcataaatcatacttagatccaactcattgacctataaatc 30294232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 38850356 - 38850296
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctcta 76  Q
    ||||||| || |||||||||||||||||||| |||||||| ||  || |||||||| ||||    
T  38850356 atcaaattacgtcatagtgttctatcataaaccaaatttgaattcaattcattgacttcta 38850296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 28508913 - 28508849
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  28508913 atcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattgacctctaaatc 28508849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 7326207 - 7326272
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  7326207 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatca 7326272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 227424 - 227360
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  227424 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 227360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 3866307 - 3866243
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||  |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  3866307 atcaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 3866243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 8181015 - 8180951
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||  |||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  8181015 atcaaatgacactatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 8180951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 12734935 - 12734871
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  12734935 atcaaattacaccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 12734871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 30306267 - 30306203
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  30306267 atcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcaatgacctctaaatc 30306203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 36183686 - 36183622
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||| || ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  36183686 atcaaatggcaccatagtgttctatcatacatcaaatttggatccaactcattgacttctaaatc 36183622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 45367672 - 45367736
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||| |||||| ||||||||| |||||||| |||||||||||    
T  45367672 atcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcatttacctctaaatc 45367736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 35643172 - 35643119
Alignment:
Q  27 tcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  35643172 tcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 35643119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 2610811 - 2610759
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  2610811 catagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 2610759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 3243700 - 3243764
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||| ||||||| ||||||||||||||||||||    
T  3243700 atcaaatgacgccatagtgttctatcatacaccaaacttggatccaactcattgacctctaaatc 3243764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 11992167 - 11992219
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  11992167 cataatgttctatcaaaaatcatatttggatctaactcattgacctctaaatc 11992219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 25834913 - 25834849
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  || |||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  25834913 atcaaatgacgccacagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 25834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 31959744 - 31959692
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  31959744 catagtgttctatcataaaccatatttggatccaactcattgacctctaaatc 31959692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 38430119 - 38430055
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  38430119 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 38430055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 38452737 - 38452797
Alignment:
Q  20 aatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| ||||||||| ||||||| | |||||||||||| ||||||||||||||||||||    
T  38452737 aatgacaccatagtgttttatcatacaccaaatttggatccaactcattgacctctaaatc 38452797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 451695 - 451759
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| |  ||||||||||| |||||| |||||||||||||    
T  451695 atcaaatgacgccatagtgttctatcatacactaaatttggatccaactcactgacctctaaatc 451759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 18424424 - 18424488
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||||||||||||||| || ||| ||||| |||| ||||| |||||||||    
T  18424424 atcaaatgacgtcatagtgttctatcataaaccatattcggatcaaacttattgatctctaaatc 18424488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 23997841 - 23997773
Alignment:
Q  12 atgaatcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||| ||  ||||||||| ||||| ||| || ||||||||| ||||||||||||||||||||    
T  23997841 atgaatcaaataacgccatagtgttttatcaaaaaccatatttggatccaactcattgacctctaaatc 23997773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 39029816 - 39029752
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||| |||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  39029816 atcaaatgacgccataatgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 39029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 4807830 - 4807767
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaat 79  Q
    ||||||||||  |||||||||||||| || | | |||||||||| |||||||||||||||||||    
T  4807830 atcaaatgacgccatagtgttctatcgtacaccgaatttggatccaactcattgacctctaaat 4807767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 30743752 - 30743699
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    |||| |||||||| |||||||| ||||||||  |||||||||||||||||||||    
T  30743752 catattgttctattataaatcatatttggattcaactcattgacctctaaatca 30743699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 9496089 - 9496037
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||||||| || ||||||||| |||||||| |||||||||||    
T  9496089 cataatgttctatcataaaccatatttggatccaactcattaacctctaaatc 9496037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 3635370 - 3635425
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgac 71  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| |||||||||||    
T  3635370 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgac 3635425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 6237812 - 6237865
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatca 81  Q
    |||||||||||||||||||  | ||||| ||| |||| ||||||||||||||||    
T  6237812 catagtgttctatcataaactatatttgaatccaactgattgacctctaaatca 6237865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 9996685 - 9996737
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||  |||||||| || ||||||||| ||||| ||||||||||||||    
T  9996685 catagtgtttaatcataaaccatatttggatccaactcgttgacctctaaatc 9996737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 36616923 - 36616871
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcatt 68  Q
    ||||||| |||| ||||||||||||||||||  | |||| |||||||||||||    
T  36616923 atcaaattacattatagtgttctatcataaactatattttgatctaactcatt 36616871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 41197274 - 41197338
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  |||| |||||||||| ||| || ||| ||||| ||||| ||||||||||||||    
T  41197274 atcaaatgacgccataatgttctatcaaaaaccatattgggatccaactcgttgacctctaaatc 41197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 45543132 - 45543183
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||| |||||||||||||| || ||||||||| |||||||| |||||||||||    
T  45543132 cataatgttctatcataaaccatatttggatcgaactcatt-acctctaaatc 45543183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 25582 - 25643
Alignment:
Q  19 aaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  25582 aaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 25643  T

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Target: scaffold0570 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 995 - 1059
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  995 atcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 1059  T

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Target: scaffold0018 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 31703 - 31639
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| ||| |||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  31703 atcaaatgacttcacagtgttctatcatacaccaaatttggatccaactcattgacctctaaatc 31639  T

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Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 16813 - 16749
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  16813 atcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatc 16749  T

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Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 4328 - 4392
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| || |||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||    
T  4328 atcaaataacgtcatagtgttctattataaaccaaatttagatccaactcattgacctctaaatc 4392  T

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Target: scaffold1318 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 566 - 502
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||  ||||||||||||||||| | ||||||||| |  ||||||||||||||||||||    
T  566 atcaaatgacgccatagtgttctatcatacaccaaatttgggtacaactcattgacctctaaatc 502  T

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Target: scaffold0692 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4859 - 4807
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||||||||||||||| || |||||||| |||||||||||| ||||||||    
T  4859 catagtgttctatcataaaccatatttggatttaactcattgacgtctaaatc 4807  T

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Target: scaffold0199 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 14806 - 14754
Alignment:
Q  28 catagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    |||||||||| |||||||| || ||||| ||| ||||||||||||| ||||||    
T  14806 catagtgttcaatcataaaccatatttgaatccaactcattgacctttaaatc 14754  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 86656 - 86720
Alignment:
Q  16 atcaaatgacatcatagtgttctatcataaatcaaatttggatctaactcattgacctctaaatc 80  Q
    ||||||| || |||||||||||||||||| |||| ||||||||| |||   | ||||||||||||    
T  86656 atcaaattacgtcatagtgttctatcatacatcatatttggatccaacctgtcgacctctaaatc 86720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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