View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0607_high_10 (Length: 250)

Name: NF0607_high_10
Description: NF0607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0607_high_10
NF0607_high_10
[»] chr8 (54 HSPs)
chr8 (13-213)||(24844556-24844756)
chr8 (109-250)||(30055649-30055789)
chr8 (115-209)||(3890412-3890506)
chr8 (114-212)||(37132477-37132575)
chr8 (114-250)||(20091598-20091733)
chr8 (101-250)||(17841634-17841782)
chr8 (112-189)||(30834850-30834927)
chr8 (112-250)||(6108028-6108165)
chr8 (110-213)||(10044518-10044620)
chr8 (114-213)||(34665551-34665649)
chr8 (110-250)||(25581032-25581171)
chr8 (111-250)||(3596835-3596973)
chr8 (112-213)||(32064916-32065016)
chr8 (112-250)||(26041908-26042045)
chr8 (110-250)||(42754835-42754974)
chr8 (112-250)||(40779924-40780061)
chr8 (113-250)||(14128992-14129128)
chr8 (112-250)||(37985851-37985987)
chr8 (112-189)||(31347571-31347647)
chr8 (143-191)||(15972863-15972911)
chr8 (116-191)||(1645951-1646026)
chr8 (116-191)||(14128868-14128943)
chr8 (114-213)||(24211169-24211267)
chr8 (116-191)||(24211539-24211614)
chr8 (116-191)||(27782103-27782178)
chr8 (116-191)||(32064749-32064824)
chr8 (116-191)||(32393862-32393937)
chr8 (116-191)||(34665386-34665461)
chr8 (116-191)||(35353045-35353120)
chr8 (116-191)||(37986041-37986116)
chr8 (116-190)||(26042103-26042177)
chr8 (143-213)||(41819593-41819663)
chr8 (112-189)||(1503638-1503714)
chr8 (112-213)||(1645759-1645859)
chr8 (112-189)||(7022173-7022249)
chr8 (112-213)||(15187730-15187830)
chr8 (116-191)||(8453838-8453913)
chr8 (116-191)||(17841836-17841911)
chr8 (116-191)||(20091787-20091862)
chr8 (116-191)||(31347768-31347843)
chr8 (114-212)||(38017103-38017201)
chr8 (116-191)||(40780115-40780190)
chr8 (124-191)||(41819764-41819831)
chr8 (124-191)||(42755028-42755095)
chr8 (112-189)||(7017653-7017729)
chr8 (143-191)||(3817916-3817964)
chr8 (115-191)||(24844845-24844920)
chr8 (116-184)||(37132651-37132719)
chr8 (152-191)||(6108219-6108258)
chr8 (124-191)||(7021990-7022057)
chr8 (116-191)||(15187564-15187639)
chr8 (143-191)||(3597027-3597075)
chr8 (124-188)||(38016983-38017047)
chr8 (155-191)||(39772787-39772823)
[»] chr6 (32 HSPs)
chr6 (104-213)||(29693615-29693724)
chr6 (112-250)||(28675281-28675418)
chr6 (108-250)||(2309214-2309355)
chr6 (112-213)||(17705264-17705363)
chr6 (112-213)||(33696867-33696967)
chr6 (112-250)||(17175816-17175953)
chr6 (116-191)||(17705451-17705526)
chr6 (112-250)||(32702338-32702475)
chr6 (116-191)||(6127279-6127354)
chr6 (116-191)||(23291070-23291145)
chr6 (110-213)||(33695119-33695221)
chr6 (114-189)||(11548386-11548460)
chr6 (116-191)||(17176007-17176082)
chr6 (116-191)||(33695313-33695388)
chr6 (116-191)||(33696700-33696775)
chr6 (108-189)||(582518-582600)
chr6 (111-213)||(18365368-18365469)
chr6 (111-213)||(18370632-18370733)
chr6 (113-179)||(34238883-34238948)
chr6 (112-213)||(23290876-23290976)
chr6 (152-191)||(2309409-2309448)
chr6 (116-191)||(6031727-6031802)
chr6 (116-179)||(8515723-8515786)
chr6 (116-191)||(28675152-28675227)
chr6 (118-191)||(11548574-11548647)
chr6 (114-210)||(6031537-6031632)
chr6 (116-191)||(18365559-18365634)
chr6 (116-191)||(18370823-18370898)
chr6 (147-213)||(8515556-8515622)
chr6 (109-166)||(2121001-2121058)
chr6 (116-193)||(18889681-18889757)
chr6 (143-191)||(9752231-9752279)
[»] chr4 (48 HSPs)
chr4 (112-213)||(37219801-37219902)
chr4 (112-210)||(11314046-11314144)
chr4 (99-250)||(44893559-44893709)
chr4 (114-213)||(17655600-17655699)
chr4 (112-213)||(21802115-21802215)
chr4 (102-250)||(24128372-24128519)
chr4 (106-250)||(46441977-46442120)
chr4 (109-186)||(25063366-25063443)
chr4 (143-250)||(30563342-30563449)
chr4 (112-250)||(44893008-44893145)
chr4 (110-205)||(36073254-36073349)
chr4 (112-211)||(42671840-42671939)
chr4 (106-250)||(9089003-9089146)
chr4 (110-250)||(36073483-36073621)
chr4 (118-191)||(42671675-42671748)
chr4 (107-250)||(53123164-53123306)
chr4 (102-213)||(4751617-4751727)
chr4 (116-191)||(7745098-7745173)
chr4 (116-191)||(33530674-33530749)
chr4 (112-189)||(10442582-10442658)
chr4 (112-213)||(22199429-22199529)
chr4 (112-213)||(33530479-33530579)
chr4 (112-213)||(37934736-37934837)
chr4 (112-250)||(31078614-31078751)
chr4 (112-250)||(47290199-47290336)
chr4 (116-191)||(10442775-10442850)
chr4 (122-213)||(23964269-23964359)
chr4 (116-191)||(31078805-31078880)
chr4 (116-191)||(49387874-49387949)
chr4 (112-213)||(36073121-36073221)
chr4 (116-191)||(2624841-2624916)
chr4 (116-191)||(21802308-21802383)
chr4 (116-191)||(22199265-22199340)
chr4 (124-191)||(23964451-23964518)
chr4 (116-191)||(24392671-24392746)
chr4 (114-189)||(24392868-24392942)
chr4 (116-191)||(36072951-36073026)
chr4 (116-191)||(47290070-47290145)
chr4 (116-191)||(50156564-50156639)
chr4 (125-191)||(36073729-36073795)
chr4 (116-191)||(4751450-4751525)
chr4 (116-191)||(24128243-24128318)
chr4 (116-191)||(36073354-36073429)
chr4 (116-191)||(44893430-44893505)
chr4 (155-191)||(9088913-9088949)
chr4 (155-191)||(17655473-17655509)
chr4 (155-191)||(44893199-44893235)
chr4 (155-191)||(53123074-53123110)
[»] chr2 (31 HSPs)
chr2 (112-213)||(22592880-22592983)
chr2 (109-213)||(9723576-9723680)
chr2 (110-213)||(9293368-9293470)
chr2 (107-250)||(23267852-23267994)
chr2 (109-250)||(33380340-33380480)
chr2 (110-250)||(7475301-7475440)
chr2 (110-213)||(10662058-10662160)
chr2 (116-250)||(3989209-3989342)
chr2 (115-250)||(31174633-31174766)
chr2 (116-191)||(9723409-9723484)
chr2 (116-191)||(10661891-10661966)
chr2 (116-191)||(14941352-14941427)
chr2 (116-191)||(35160761-35160836)
chr2 (111-213)||(35160929-35161030)
chr2 (116-191)||(9293562-9293637)
chr2 (102-213)||(13355018-13355128)
chr2 (155-213)||(14941201-14941259)
chr2 (143-213)||(16767287-16767357)
chr2 (112-189)||(43331106-43331182)
chr2 (135-191)||(27847655-27847711)
chr2 (133-189)||(37335838-37335894)
chr2 (116-191)||(7475494-7475569)
chr2 (114-189)||(21393483-21393556)
chr2 (116-191)||(21393674-21393749)
chr2 (116-191)||(21936085-21936160)
chr2 (116-191)||(23268048-23268123)
chr2 (116-191)||(33380211-33380286)
chr2 (116-191)||(43330916-43330991)
chr2 (143-191)||(3989107-3989155)
chr2 (124-191)||(31174820-31174887)
chr2 (107-152)||(27847791-27847836)
[»] chr3 (47 HSPs)
chr3 (112-210)||(40328004-40328102)
chr3 (109-213)||(33145882-33145985)
chr3 (108-213)||(26612916-26613021)
chr3 (112-213)||(36864827-36864928)
chr3 (110-213)||(47738281-47738384)
chr3 (110-212)||(24343720-24343822)
chr3 (106-250)||(3456197-3456340)
chr3 (110-250)||(19650693-19650831)
chr3 (112-213)||(33113964-33114064)
chr3 (124-213)||(33839705-33839794)
chr3 (111-250)||(37522186-37522324)
chr3 (112-250)||(3574321-3574458)
chr3 (113-213)||(8320378-8320477)
chr3 (107-250)||(30385534-30385675)
chr3 (114-213)||(42921295-42921394)
chr3 (111-213)||(3089589-3089690)
chr3 (112-189)||(8361834-8361910)
chr3 (112-250)||(3137209-3137346)
chr3 (112-250)||(37216848-37216985)
chr3 (110-213)||(2754889-2754991)
chr3 (116-191)||(3574513-3574588)
chr3 (116-191)||(6041888-6041963)
chr3 (112-250)||(22426140-22426276)
chr3 (112-189)||(9796824-9796900)
chr3 (112-213)||(34482683-34482783)
chr3 (116-191)||(42297357-42297433)
chr3 (116-191)||(2754721-2754796)
chr3 (116-191)||(3456068-3456143)
chr3 (116-191)||(11347272-11347347)
chr3 (116-191)||(37217039-37217114)
chr3 (112-195)||(41224422-41224504)
chr3 (116-191)||(48160909-48160984)
chr3 (112-189)||(6042071-6042147)
chr3 (113-189)||(46919088-46919164)
chr3 (124-191)||(37522065-37522132)
chr3 (112-189)||(48161100-48161176)
chr3 (143-191)||(8362031-8362079)
chr3 (135-191)||(19650886-19650942)
chr3 (135-191)||(22426330-22426386)
chr3 (135-191)||(33839554-33839610)
chr3 (152-191)||(3089457-3089496)
chr3 (116-191)||(3137400-3137475)
chr3 (124-191)||(9797015-9797082)
chr3 (116-191)||(33113797-33113872)
chr3 (152-191)||(33145752-33145791)
chr3 (155-213)||(42298032-42298090)
chr3 (143-191)||(41883209-41883257)
[»] chr5 (32 HSPs)
chr5 (103-250)||(2477769-2477915)
chr5 (112-213)||(12614532-12614633)
chr5 (109-250)||(33584121-33584261)
chr5 (132-250)||(27481955-27482074)
chr5 (112-250)||(4892335-4892472)
chr5 (109-213)||(6043304-6043407)
chr5 (112-250)||(3521802-3521938)
chr5 (112-250)||(14138801-14138937)
chr5 (111-213)||(8145543-8145644)
chr5 (112-189)||(22912852-22912928)
chr5 (113-213)||(3362949-3363048)
chr5 (112-250)||(25398371-25398508)
chr5 (112-250)||(37321588-37321725)
chr5 (116-191)||(2477640-2477715)
chr5 (116-191)||(11361117-11361192)
chr5 (116-191)||(12614719-12614794)
chr5 (110-250)||(38899518-38899658)
chr5 (112-189)||(17545477-17545553)
chr5 (116-191)||(4892206-4892281)
chr5 (116-191)||(22913040-22913115)
chr5 (116-191)||(25398242-25398317)
chr5 (116-191)||(6043497-6043572)
chr5 (124-191)||(8145387-8145454)
chr5 (116-191)||(33584315-33584390)
chr5 (115-213)||(12850972-12851069)
chr5 (143-250)||(31640766-31640872)
chr5 (143-191)||(31640926-31640974)
chr5 (135-191)||(37321779-37321835)
chr5 (116-191)||(3362782-3362857)
chr5 (150-205)||(13664737-13664792)
chr5 (116-191)||(38899712-38899787)
chr5 (143-191)||(17545671-17545719)
[»] chr7 (36 HSPs)
chr7 (112-250)||(42611944-42612081)
chr7 (121-213)||(29737314-29737406)
chr7 (114-250)||(4974532-4974667)
chr7 (112-189)||(18037171-18037247)
chr7 (110-250)||(24395105-24395243)
chr7 (112-213)||(42696253-42696354)
chr7 (114-210)||(20009895-20009991)
chr7 (113-189)||(37476876-37476951)
chr7 (116-191)||(3961983-3962058)
chr7 (116-191)||(15329277-15329352)
chr7 (116-191)||(48880913-48880988)
chr7 (112-189)||(15238578-15238654)
chr7 (112-213)||(35445567-35445667)
chr7 (112-213)||(45637881-45637981)
chr7 (112-250)||(48880722-48880859)
chr7 (112-250)||(3962112-3962248)
chr7 (116-191)||(4974721-4974796)
chr7 (116-191)||(34482839-34482914)
chr7 (110-213)||(35876414-35876516)
chr7 (110-177)||(36790269-36790336)
chr7 (116-191)||(42611815-42611890)
chr7 (116-191)||(45637716-45637791)
chr7 (112-210)||(15577642-15577739)
chr7 (112-189)||(25167651-25167727)
chr7 (116-191)||(15577836-15577911)
chr7 (124-191)||(18036990-18037057)
chr7 (110-213)||(30848739-30848841)
chr7 (116-191)||(36790452-36790527)
chr7 (116-191)||(37477066-37477141)
chr7 (112-213)||(15329444-15329544)
chr7 (116-191)||(20010084-20010158)
chr7 (116-191)||(25167836-25167911)
chr7 (116-191)||(29737143-29737218)
chr7 (116-191)||(35444562-35444637)
chr7 (143-191)||(15238413-15238461)
chr7 (143-191)||(30848600-30848648)
[»] chr1 (38 HSPs)
chr1 (114-210)||(44690818-44690914)
chr1 (113-185)||(52064373-52064445)
chr1 (112-213)||(27523050-27523151)
chr1 (111-250)||(37821628-37821766)
chr1 (112-250)||(25463809-25463946)
chr1 (109-189)||(32000058-32000137)
chr1 (112-250)||(51737638-51737775)
chr1 (108-250)||(25973542-25973681)
chr1 (113-250)||(40215121-40215257)
chr1 (112-213)||(18404618-18404718)
chr1 (112-189)||(33786426-33786502)
chr1 (112-250)||(6883620-6883757)
chr1 (112-250)||(19015537-19015674)
chr1 (112-250)||(36966503-36966640)
chr1 (112-250)||(41876237-41876374)
chr1 (112-250)||(44094831-44094967)
chr1 (112-189)||(20304925-20305001)
chr1 (115-191)||(33786621-33786696)
chr1 (116-191)||(16045784-16045859)
chr1 (116-191)||(25463680-25463755)
chr1 (136-191)||(27523241-27523296)
chr1 (116-191)||(32000253-32000328)
chr1 (116-191)||(40214992-40215067)
chr1 (116-191)||(40273706-40273781)
chr1 (114-189)||(40273902-40273976)
chr1 (112-213)||(3559787-3559887)
chr1 (116-191)||(3559621-3559696)
chr1 (116-191)||(18404446-18404521)
chr1 (116-191)||(44094702-44094777)
chr1 (150-213)||(52329445-52329508)
chr1 (116-191)||(9910279-9910354)
chr1 (116-191)||(19015408-19015483)
chr1 (150-213)||(22157370-22157433)
chr1 (116-191)||(36966694-36966769)
chr1 (116-191)||(37821820-37821895)
chr1 (116-191)||(41876428-41876503)
chr1 (155-191)||(6883530-6883566)
chr1 (143-191)||(10167431-10167479)
[»] scaffold0204 (2 HSPs)
scaffold0204 (101-250)||(4529-4677)
scaffold0204 (116-191)||(4400-4475)
[»] scaffold0471 (2 HSPs)
scaffold0471 (102-250)||(12975-13122)
scaffold0471 (116-191)||(12846-12921)
[»] scaffold0178 (2 HSPs)
scaffold0178 (111-250)||(11754-11892)
scaffold0178 (116-191)||(11625-11700)
[»] scaffold0228 (5 HSPs)
scaffold0228 (112-250)||(26069-26206)
scaffold0228 (112-250)||(16117-16254)
scaffold0228 (124-191)||(8414-8481)
scaffold0228 (124-191)||(15996-16063)
scaffold0228 (124-191)||(25948-26015)
[»] scaffold0085 (2 HSPs)
scaffold0085 (110-250)||(47983-48121)
scaffold0085 (116-191)||(47854-47929)
[»] scaffold0665 (1 HSPs)
scaffold0665 (116-191)||(3072-3147)
[»] scaffold0096 (2 HSPs)
scaffold0096 (102-250)||(41144-41290)
scaffold0096 (116-191)||(41015-41090)


Alignment Details
Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 24844556 - 24844756
Alignment:
Q  13 aatatctagtataccaaagccacctcagctaacaaagagtcaaagaagaagtcaatttatcataatagcatatgaagttatgaatgtcaatttatttatg 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24844556 aatatctagtataccaaagccacctaagctaacaaagagtcaaagaagaagtcaatttatcataatagcataggaagttatgaatgtcaatttatttatg 24844655  T
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttca 212  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  24844656 gaaaatgttagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttca 24844755  T
Q  213 t 213  Q
    |    
T  24844756 t 24844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 250
Target Start/End: Complemental strand, 30055789 - 30055649
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacct 208  Q
    ||||||||||||||||||| || ||||||||||  |||||||||| ||||||| ||||||| ||||||||||||||||||||| ||| | ||||||||||    
T  30055789 tatggaaaatgctagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacct 30055691  T
Q  209 ttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||||          ||||||||| |||||||||||||||||    
T  30055690 ttcataaaaaaaaaatacataacatccaccaccccatgattt 30055649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 3890412 - 3890506
Alignment:
Q  115 aaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||||  ||| ||||||||||||| |||||||||||||||| |||||||||||    
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaacctt 3890506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 37132477 - 37132575
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttca 212  Q
    ||||||||||||||||| |||||||||| ||||||||||| | ||||| ||||||| ||||||||||||||||||| | ||||| ||||||||||||||    
T  37132477 aaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca 37132575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 20091598 - 20091733
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||||||||||||| ||||||||||  |||||||||| ||||||| |||| || ||||||||||||||||||| | ||| | |||||||||||||||    
T  20091598 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 20091696  T
Q  214 nnnnnnnnnntacataacacccaccaccccatgattt 250  Q
              |||||||||||||||||||||||||||    
T  20091697 aaaaaaaaaatacataacacccaccaccccatgattt 20091733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 250
Target Start/End: Original strand, 17841634 - 17841782
Alignment:
Q  101 aatttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaatt 200  Q
    ||||| |||||||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||    
T  17841634 aatttttttatggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcattt 17841732  T
Q  201 attaacctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||| |||||||          |||||||||||||||||||||||||||    
T  17841733 attaatctttcataaaaaaaagatacataacacccaccaccccatgattt 17841782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 30834850 - 30834927
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    |||||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  30834850 ggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagattt 30834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 6108028 - 6108165
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| ||||||| |||||||||| |||||||| | ||| | ||||||| |||||    
T  6108028 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 6108126  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  6108127 ataaaaagaagatacataacacccaccaccccatgattt 6108165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 10044620 - 10044518
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| ||||| | ||||||| |||    
T  10044620 atggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctt 10044522  T
Q  210 tcat 213  Q
    ||||    
T  10044521 tcat 10044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 34665649 - 34665551
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||||||||||||| ||||||||||  |||||||||| ||||||| |||| || ||||||||||||||||||| | ||| | |||||||||||||||    
T  34665649 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 34665551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 25581032 - 25581171
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||| ||| ||||||| ||| ||| |||||||||| |||||||| | ||| | ||||||| |||    
T  25581032 atggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctt 25581130  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          |||||||||||||||||||||||||||    
T  25581131 tcataaaaaaaagatacataacacccaccaccccatgattt 25581171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 3596835 - 3596973
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||| | |||||| |||||||||||  ||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  3596835 tggaaaatgctagatatcaagaatgatttt-ataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatcttt 3596933  T
Q  211 catnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||          |||||||||||||||||||||||||||    
T  3596934 cataaaaaaaagatacataacacccaccaccccatgattt 3596973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 32065016 - 32064916
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||||  |||||| ||||||||||| ||||||| |||||||||| |||||||| | ||| | ||||||| |||||    
T  32065016 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 32064918  T
Q  212 at 213  Q
    ||    
T  32064917 at 32064916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 26041908 - 26042045
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  26041908 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 26042006  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  26042007 ataaaaaaaagatacataacacccaccaccccatgattt 26042045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 42754835 - 42754974
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||| ||||||||||| ||||  | |||||||||| |||||||| | ||| | ||||||| |||    
T  42754835 atggaaaatgctagatatcaagaatgatttt-ataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctt 42754933  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          |||||||||||||||| ||||||||||    
T  42754934 tcataaaaaaaaaatacataacacccaccatcccatgattt 42754974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 40779924 - 40780061
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  40779924 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 40780022  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          ||||||||| |||||||||||||||||    
T  40780023 ataaaaaaaagatacataacatccaccaccccatgattt 40780061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 14129128 - 14128992
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttca 212  Q
    |||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||||    
T  14129128 gaaaatgctagatatcaagaatgatttt-ataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 14129030  T
Q  213 tnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |          ||||||||||||||||||| |||||||    
T  14129029 taaaaaaaaaatacataacacccaccaccctatgattt 14128992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 37985851 - 37985987
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| | ||  | ||||||| |||||    
T  37985851 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttc 37985949  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  37985950 at-aaaaaaaaatacataacacccaccaccccatgattt 37985987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 31347571 - 31347647
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||| || |||||||||| ||||||||    
T  31347571 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacctttagattt 31347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 15972911 - 15972863
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  15972911 caagaaagattgaagaatgacatgacagaataatcacccttagatttta 15972863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 1646026 - 1645951
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||| | |||| ||||||||||||||||||||||||    
T  1646026 aatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatcacccttagatttta 1645951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 14128868 - 14128943
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  |||||||||| |||| ||||||||||||||||||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagatttta 14128943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 24211169 - 24211267
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||||||||||||| ||||||||| | |||||||||  ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||||    
T  24211169 aaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 24211614 - 24211539
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || |||||||||||| ||||||||||||||||| ||||||    
T  24211614 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatcacccttaaatttta 24211539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 27782178 - 27782103
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| ||  |||||| ||||||||||| || |||| |||| ||||||||||||||||||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagatttta 27782103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 32064749 - 32064824
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  32064749 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 32064824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 32393862 - 32393937
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||| ||||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaatttta 32393937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 34665386 - 34665461
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 34665461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 35353045 - 35353120
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 35353120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 37986116 - 37986041
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  |||||||||| |||| ||||||||||||||||||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagatttta 37986041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 26042177 - 26042103
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttt 190  Q
    ||||||| |||| || || ||||||| |||||||  || ||||||| ||||||||||||||||||||||||||||    
T  26042177 aatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttt 26042103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 41819593 - 41819663
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||| | ||| | |||||||||| ||||    
T  41819593 caagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcat 41819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 1503638 - 1503714
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| ||||||||    
T  1503638 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagattt 1503714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 1645759 - 1645859
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | ||||||||   ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  1645759 ggaaaatgctagatatcaagaatgatttt-ataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 1645857  T
Q  212 at 213  Q
    ||    
T  1645858 at 1645859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 7022249 - 7022173
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||| || | || ||||||| |||||||||||    
T  7022249 ggaaaatgctagatatcaacaatgattt-atcaagaaagattcaagaatgacaagtcacaataatcgcccttagattt 7022173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 15187830 - 15187730
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||  || |||||||||| |||||||| | ||| | ||||||| |||||    
T  15187830 ggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 15187732  T
Q  212 at 213  Q
    ||    
T  15187731 at 15187730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 8453838 - 8453913
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| ||||||| |||||||||||||||||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagatttta 8453913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 17841911 - 17841836
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  17841911 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 17841836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 20091862 - 20091787
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| ||  |||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 20091787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 31347843 - 31347768
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| ||  |||||  ||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  31347843 aatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagatttta 31347768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 38017201 - 38017103
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataa-tcacccttagattttaatcttaattattaacctttca 212  Q
    ||||||||||||||||| ||||||||| | |||||||||| ||||||| ||||||| ||||| | ||| |||||||| | ||| | ||||||| ||||||    
T  38017201 aaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttca 38017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 40780190 - 40780115
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  40780190 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 40780115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 41819831 - 41819764
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||| |||||| | ||||||||||  ||| ||||||||||||||||||||||||    
T  41819831 atatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatcacccttagatttta 41819764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 42755095 - 42755028
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 42755028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 7017653 - 7017729
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| ||||| |||| ||||||| ||||||||||| |||   | |||||||| ||||||||||    
T  7017653 ggaaaatgctagatatcaagaatga-tttatcaagaaatatttaagaatgacattttataataatcatccttagattt 7017729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 3817964 - 3817916
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||| ||||||  |||||||||||||||||||||||||||||    
T  3817964 caagaaaaattcaagaattacatgacagaataatcacccttagatttta 3817916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 24844920 - 24844845
Alignment:
Q  115 aaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||| ||||||| ||  ||||||  |||||| ||| ||||||| ||||||| |||||||||||||||||||||    
T  24844920 aaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagatttta 24844845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 37132719 - 37132651
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcaccctta 184  Q
    ||||||| ||||||| ||  |||||| ||||||| ||||||||||| |||| ||||||||||| |||||    
T  37132719 aatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatcatcctta 37132651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 6108258 - 6108219
Alignment:
Q  152 tttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  6108258 tttaagaatgacatggcagaataatcacccttagatttta 6108219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 7021990 - 7022057
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||  ||||||| ||| |||||||  ||| ||||||||||||||||||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagatttta 7022057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 15187564 - 15187639
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || |||||||  ||| ||||||||| ||||||||||||||    
T  15187564 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagatttta 15187639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 3597075 - 3597027
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||| || ||||||| |||| ||||||||| ||||||||||||||    
T  3597075 caagaaagtttcaagaatgacatggcagaataattacccttagatttta 3597027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 38016983 - 38017047
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatt 188  Q
    ||||||| || ||||||| |||||||  || ||||||| |||| |||||||||||||||| ||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttggatt 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 39772823 - 39772787
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  39772823 aagaatgacatggcagaataatcacccttagatttta 39772787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 29693724 - 29693615
Alignment:
Q  104 ttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattatt 203  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||| |||||||||||| | ||||| |||||    
T  29693724 ttatttaaggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttatt 29693625  T
Q  204 aacctttcat 213  Q
    | ||||||||    
T  29693624 atcctttcat 29693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 28675418 - 28675281
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||| ||||||||||||||||||| | ||| | |||||||||||||    
T  28675418 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttc 28675320  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||| ||||||||||||||||||    
T  28675319 ataaataaaaaatacataacccccaccaccccatgattt 28675281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 2309214 - 2309355
Alignment:
Q  108 ttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacc 207  Q
    |||||||||||||||||||||||  |||||||||  |||||||||| ||||||| |||| || ||||||||||||||||||| | ||| | |||||||||    
T  2309214 ttatggaaaatgctagatatcaacgatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 2309312  T
Q  208 tttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||||          |||||||||||||| ||||||||||||    
T  2309313 tttcataaaaaaaaaatacataacacccacaaccccatgattt 2309355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 17705264 - 17705363
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| ||||||| |||||||| |||||||||| | ||| | |||||||||||||    
T  17705264 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatgacacaataatca-ccttagatttcagtctcatttattaacctttc 17705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 33696967 - 33696867
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  33696967 ggaaaatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 33696869  T
Q  212 at 213  Q
    ||    
T  33696868 at 33696867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 17175816 - 17175953
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| ||||  | |||||||||| |||||||| | ||| | ||||||| |||||    
T  17175816 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttc 17175914  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  17175915 ataaaaaaaaaatacataacacccaccaccccatgattt 17175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 17705526 - 17705451
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagatttta 17705451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 32702475 - 32702338
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| ||||||| |||||| ||| |||||||| | ||| | ||||||| |||||    
T  32702475 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttc 32702377  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          ||||||| |||||||||||||||||||    
T  32702376 ataaaaaaaagatacataagacccaccaccccatgattt 32702338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 6127279 - 6127354
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  6127279 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 6127354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 23291145 - 23291070
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  23291145 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 23291070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 33695119 - 33695221
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||| |||||||||||  ||| || |||||||||| |||||||| | ||| | ||||||| |||    
T  33695119 atggaaaatgctagatatcaagaatgatttt-ataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatctt 33695217  T
Q  210 tcat 213  Q
    ||||    
T  33695218 tcat 33695221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 11548386 - 11548460
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||| |||||||| | |||||| |||| ||||||| |||| || |||||||||||||||||||    
T  11548386 aaaatgctagatatcaagaatgattt-atcaagaacgattcaagaatgacatggcacaataatcacccttagattt 11548460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 17176082 - 17176007
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  || ||||||| |||||||||||||||||||||||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagatttta 17176007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 33695388 - 33695313
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  33695388 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 33695313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 33696700 - 33696775
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  33696700 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 33696775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 582518 - 582600
Alignment:
Q  108 ttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcat-gacagaataatcacccttagattt 189  Q
    |||||||||||| |||||||||| ||||||||||  |||||| |||||||||||  || | ||||||||||||| ||||||||    
T  582518 ttatggaaaatgttagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagattt 582600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 18365368 - 18365469
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||  || |||||||||| |||||||| | ||| | ||||||| ||||    
T  18365368 tggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatcttt 18365466  T
Q  211 cat 213  Q
    |||    
T  18365467 cat 18365469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 18370632 - 18370733
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||  || |||||||||| |||||||| | ||| | ||||||| ||||    
T  18370632 tggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatcttt 18370730  T
Q  211 cat 213  Q
    |||    
T  18370731 cat 18370733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 34238883 - 34238948
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcac 179  Q
    |||||||||||||||||| |||||||||| |||| |||||| ||||||| ||||||| |||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaag-aagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 23290876 - 23290976
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||| |||||||  ||| || |||||| ||| |||||||| | ||| | ||||||| |||||    
T  23290876 ggaaaatgctagatatcaaaaatgatttt-ataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttc 23290974  T
Q  212 at 213  Q
    ||    
T  23290975 at 23290976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 2309448 - 2309409
Alignment:
Q  152 tttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  2309448 tttaagaatggcatggcagaataatcacccttagatttta 2309409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 6031802 - 6031727
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||| | ||| |||  |||||||||| |||||||||||||||||||||| ||||||    
T  6031802 aatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatcacccttaaatttta 6031727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 8515786 - 8515723
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcac 179  Q
    ||||||| ||||||| || ||||||| ||||| ||||||||||||| |||| ||||||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 28675152 - 28675227
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| | ||||||||||||||||||||||    
T  28675152 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagatttta 28675227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 11548647 - 11548574
Alignment:
Q  118 tgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||| ||||||| ||  |||||  ||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagatttta 11548574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 6031537 - 6031632
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    ||||| || |||||||| ||||||||||  || ||||||||||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  6031537 aaaatactggatatcaagaatgattttataaa-aaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 6031632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 18365634 - 18365559
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  || ||||||| |||| ||||||||||||||||| ||||||    
T  18365634 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaatttta 18365559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 18370898 - 18370823
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  || ||||||| |||| ||||||||||||||||| ||||||    
T  18370898 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaatttta 18370823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 8515556 - 8515622
Alignment:
Q  147 aaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    |||||||||| |||| ||||  ||||||||||| ||||||||| | ||||| |||||||| ||||||    
T  8515556 aaagatttaaaaatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcat 8515622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 2121001 - 2121058
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatg 166  Q
    ||||||||||| |||||||||| ||||||||||  || ||||||| ||||||| ||||    
T  2121001 tatggaaaatgttagatatcaaaaatgattttataaaaaaagattcaagaatgacatg 2121058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 18889757 - 18889681
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaat 193  Q
    ||||||| ||||||| || ||||| | |||||||  || ||||||| |||| ||||||||| ||||||||||||||||    
T  18889757 aatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataataacccttagattttaat 18889681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 9752279 - 9752231
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||| |||||||  ||| ||||||||||||||||||||||||    
T  9752279 caagaaaaattcaagaatgatatggcagaataatcacccttagatttta 9752231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 37219902 - 37219801
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||| |||||||||||||    
T  37219902 ggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttc 37219803  T
Q  212 at 213  Q
    ||    
T  37219802 at 37219801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 11314046 - 11314144
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    ||||||||||||||||||| |||||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| || ||||| ||||||||||||    
T  11314046 ggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 250
Target Start/End: Complemental strand, 44893709 - 44893559
Alignment:
Q  99 tcaatttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaa 198  Q
    |||||| ||||||||||||||||||||||||| ||||||||| | |||||| ||||||||||| |||| || |||||||||| |||||||| | ||| |     
T  44893709 tcaattaatttatggaaaatgctagatatcaagaatgatttt-ataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcat 44893611  T
Q  199 ttattaacctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||||| |||||||          |||||||||||||||| ||||||||||    
T  44893610 ttattaatctttcataaaaaaaagatacataacacccaccatcccatgattt 44893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 17655699 - 17655600
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||| ||||||| |||||| ||| |||||||| | ||| | |||||||||||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 21802115 - 21802215
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||| ||||||||||||||||||| | ||| | ||||||| |||||    
T  21802115 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttc 21802213  T
Q  212 at 213  Q
    ||    
T  21802214 at 21802215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 24128519 - 24128372
Alignment:
Q  102 atttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaatta 201  Q
    ||||||||| | ||||||||||||||||| ||||||||||  |||||| ||||||||||| ||||||| |||||| ||| |||||||| | ||| | |||    
T  24128519 atttatttaagaaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcattta 24128421  T
Q  202 ttaacctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||| |||||||          ||||||||| |||||||||||||||||    
T  24128420 ttaatctttcataaaaaaaagatacataacatccaccaccccatgattt 24128372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 250
Target Start/End: Complemental strand, 46442120 - 46441977
Alignment:
Q  106 atttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaa 205  Q
    ||||| ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | |||||||    
T  46442120 atttaaggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 46442022  T
Q  206 cctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
     |||||||          |||||||||||||||||||||||||||    
T  46442021 tctttcataaaaaaaagatacataacacccaccaccccatgattt 46441977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 25063366 - 25063443
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttaga 186  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||  ||||||||||| ||||||    
T  25063366 tatggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcactcttaga 25063443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 30563449 - 30563342
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcatnnnnnnnnnntacataacacccaccaccc 242  Q
    ||||||||||| ||||||| ||||||| ||||||||| ||||||||| | ||||| |||||||||||||||          |||||||||||||||||||    
T  30563449 caagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataacacccaccaccc 30563350  T
Q  243 catgattt 250  Q
    ||||||||    
T  30563349 catgattt 30563342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 44893008 - 44893145
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||||  |||||| ||||||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  44893008 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 44893106  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||| ||||||||||    
T  44893107 ataaaaaaaagatacataacacccaccatcccatgattt 44893145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 36073254 - 36073349
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaa 205  Q
    |||||||||||||||||  || |||||||||| |||||||||||||||||||  ||| ||||||||| || ||||||||| | ||||| |||||||    
T  36073254 atggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 42671939 - 42671840
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||| ||||||||  ||||||||| | ||| | || ||||||||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 250
Target Start/End: Complemental strand, 9089146 - 9089003
Alignment:
Q  106 atttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaa 205  Q
    ||||||| ||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||| | |||||||| | ||| | |||||||    
T  9089146 atttatgaaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaa 9089048  T
Q  206 cctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
     |||||||          |||||||||||||||||||||||||||    
T  9089047 tctttcatacaaaaaagatacataacacccaccaccccatgattt 9089003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 36073621 - 36073483
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||    
T  36073621 atggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 36073523  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          |||||||||||||||||||||||||||    
T  36073522 tcat-aaaaaaagatacataacacccaccaccccatgattt 36073483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 42671675 - 42671748
Alignment:
Q  118 tgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||| |||||||||| ||||||| ||| ||| ||||||||||| |||| ||||||||||||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagatttta 42671748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 53123306 - 53123164
Alignment:
Q  107 tttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaac 206  Q
    |||| ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||| | |||||||| | ||| | |||||||     
T  53123306 tttaaggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaat 53123208  T
Q  207 ctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||||||          |||||||||||||||||||||||||||    
T  53123207 ctttcatacaaaaaagatacataacacccaccaccccatgattt 53123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 4751727 - 4751617
Alignment:
Q  102 atttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaatta 201  Q
    ||||||||| ||||||||||||||||||| ||| ||||| | |||||| ||||||||||| |||| || ||||| |||| |||||||| | ||| | |||    
T  4751727 atttatttaaggaaaatgctagatatcaagaataatttt-ataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcattta 4751629  T
Q  202 ttaacctttcat 213  Q
    |||| |||||||    
T  4751628 ttaatctttcat 4751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 7745173 - 7745098
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 7745098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 33530749 - 33530674
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  33530749 aatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagatttta 33530674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 10442582 - 10442658
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| ||||||||    
T  10442582 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagattt 10442658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 22199529 - 22199429
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  22199529 ggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 22199431  T
Q  212 at 213  Q
    ||    
T  22199430 at 22199429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 33530479 - 33530579
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | || ||||||  ||||||| |||| || |||||||||| |||||||| | ||||| ||||||| |||||    
T  33530479 ggaaaatgctagatatcaagaatgatttt-ataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttc 33530577  T
Q  212 at 213  Q
    ||    
T  33530578 at 33530579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 37934736 - 37934837
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||| ||||||| |  | ||||||||  |||||||||| || ||||  |||||| ||||||||||||||||||| ||||| | |||||||||||||    
T  37934736 ggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttc 37934835  T
Q  212 at 213  Q
    ||    
T  37934836 at 37934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 31078614 - 31078751
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | || ||| ||| ||||||| |||| || |||||||| | |||||||| ||||| | ||||||| |||||    
T  31078614 ggaaaatgctagatatcaagaatgatttt-ataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttc 31078712  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          ||||||||||||| |||||||||||||    
T  31078713 ataaaaaaaagatacataacacccatcaccccatgattt 31078751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 47290336 - 47290199
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| ||||  | |||||||||| |||||||| | ||| | ||||||  |||||    
T  47290336 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattctttc 47290238  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  47290237 ataaaaaaaagatacataacacccaccaccccatgattt 47290199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 10442850 - 10442775
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  10442850 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 10442775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 23964269 - 23964359
Alignment:
Q  122 agatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||||| ||||||||||  |||||||||||||||||| |||| || |||||||| | |||||||| ||||| | ||||||| |||||||    
T  23964269 agatatcaagaatgattttat-aagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcat 23964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 31078880 - 31078805
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  31078880 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 31078805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 49387949 - 49387874
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 49387874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 36073221 - 36073121
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || ||||| |||| |||||||| | ||| | ||||||| |||||    
T  36073221 ggaaaatgctagatatcaaaaatgatttt-ataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 36073123  T
Q  212 at 213  Q
    ||    
T  36073122 at 36073121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 2624841 - 2624916
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || |||||||  ||| ||||||||||||||||||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagatttta 2624916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 21802383 - 21802308
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| ||  |||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  21802383 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 21802308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 22199265 - 22199340
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||| ||||||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagatttta 22199340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 23964518 - 23964451
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||| ||| |||  |||||||||| |||| ||||||||||||||||||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagatttta 23964451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 24392671 - 24392746
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  ||||||| ||| ||||||| |||| ||||||||||||||||| ||||||    
T  24392671 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaatttta 24392746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 24392942 - 24392868
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||| |||||||| | ||||||| ||||||||||| |||  || |||||||| ||||||||||    
T  24392942 aaaatgctagatatcaagaatgattt-atcaagaaatatttaagaatgacatagcacaataatcatccttagattt 24392868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 36072951 - 36073026
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| |||||||| |||||||||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagatttta 36073026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 47290070 - 47290145
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  47290070 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 47290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 50156639 - 50156564
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| || || ||||||  |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  50156639 aatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 50156564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 36073795 - 36073729
Alignment:
Q  125 tatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||| || |||||||  |||||||||||||||||| ||||||| |||||||||  ||||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagatttta 36073729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 4751450 - 4751525
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |  ||||||| |||| |||||||| |||||||||||||||    
T  4751450 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagatttta 4751525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 24128243 - 24128318
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||| ||||||||||||    
T  24128243 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagatttta 24128318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 36073354 - 36073429
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||||||||| ||||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaatttta 36073429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 44893430 - 44893505
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  ||| |||  || ||||||| |||| ||||||||||||||||||||||||    
T  44893430 aatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagatttta 44893505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 9088913 - 9088949
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  9088913 aagaatgacatggcagaataatcacccttagatttta 9088949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 17655473 - 17655509
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  17655473 aagaatgacatggcagaataatcacccttagatttta 17655509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 44893235 - 44893199
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  44893235 aagaatgacatggcagaataatcacccttagatttta 44893199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 53123074 - 53123110
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  53123074 aagaatgacatggcagaataatcacccttagatttta 53123110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 22592983 - 22592880
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttt--aatcttaattattaacctt 209  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||  | ||||| |||||||||||    
T  22592983 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctt 22592884  T
Q  210 tcat 213  Q
    ||||    
T  22592883 tcat 22592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 9723680 - 9723576
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacct 208  Q
    ||||||||||| |||||||||| |||||||| | ||||||| ||||||||||| |||||||||||||||||| |||||||| | ||||| ||||| || |    
T  9723680 tatggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcactt 9723581  T
Q  209 ttcat 213  Q
    |||||    
T  9723580 ttcat 9723576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 9293368 - 9293470
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||| ||||||||||||||||||| | ||| | ||||||| |||    
T  9293368 atggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctt 9293466  T
Q  210 tcat 213  Q
    ||||    
T  9293467 tcat 9293470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 23267852 - 23267994
Alignment:
Q  107 tttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaac 206  Q
    |||| ||||||||||||||||||| ||||||||||  |||||| ||||||||||| |||| || |||||||||| |||||||| | ||| | |||||||     
T  23267852 tttagggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaat 23267950  T
Q  207 ctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||||||          |||||||||||||||||||||||||||    
T  23267951 ctttcataaaaaaaagatacataacacccaccaccccatgattt 23267994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 250
Target Start/End: Complemental strand, 33380480 - 33380340
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacct 208  Q
    |||||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||    
T  33380480 tatggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 33380382  T
Q  209 ttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||||          |||||||||||||||||||||||||||    
T  33380381 ttcattaaaaaaagatacataacacccaccaccccatgattt 33380340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 7475301 - 7475440
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||| ||| |||||||  |||||| |||||||||| |||||||| | ||| | ||||||| |||    
T  7475301 atggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctt 7475399  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          |||||||||||||||||||||||||||    
T  7475400 tcataaaaaaaagatacataacacccaccaccccatgattt 7475440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 10662160 - 10662058
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||| ||| ||||||| ||||||| |||||||||| |||||||| | ||| | ||||||| |||    
T  10662160 atggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctt 10662062  T
Q  210 tcat 213  Q
    ||||    
T  10662061 tcat 10662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 3989342 - 3989209
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcatnn 215  Q
    ||||||||||||||| ||||||||| | |||||||||  ||||||| ||||||| |||||| ||| |||||||| | ||| | ||||||| |||||||      
T  3989342 aatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataa 3989244  T
Q  216 nnnnnnnntacataacacccaccaccccatgattt 250  Q
            |||||||||||||||||||||||||||    
T  3989243 aaaaaaaatacataacacccaccaccccatgattt 3989209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 250
Target Start/End: Original strand, 31174633 - 31174766
Alignment:
Q  115 aaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcatn 214  Q
    |||||||||||||||| ||||||||| | |||||||||| ||||||| ||||||| ||||| | || |||||||| ||||| | ||||||| |||||||     
T  31174633 aaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcat- 31174730  T
Q  215 nnnnnnnnntacataacacccaccaccccatgattt 250  Q
             |||||||||||||||||||||||||||    
T  31174731 aaaaaaaaatacataacacccaccaccccatgattt 31174766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 9723409 - 9723484
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| || || |||||||  |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaatttta 9723484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 10661891 - 10661966
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 10661966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 14941427 - 14941352
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || |||||||  |||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  14941427 aatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagatttta 14941352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 35160761 - 35160836
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  35160761 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 35160836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 35161030 - 35160929
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  35161030 tggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 35160932  T
Q  211 cat 213  Q
    |||    
T  35160931 cat 35160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 9293637 - 9293562
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  9293637 aatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagatttta 9293562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 13355128 - 13355018
Alignment:
Q  102 atttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaatta 201  Q
    ||||||| | ||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||| || |||||||||  |||||||| | ||| | |||    
T  13355128 atttattaaaggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcattta 13355030  T
Q  202 ttaacctttcat 213  Q
    |||| |||||||    
T  13355029 ttaatctttcat 13355018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 14941201 - 14941259
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||| ||||||| |||||||| |||||||||| ||||||| |||||||||||||||    
T  14941201 aagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcat 14941259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 16767287 - 16767357
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||||||| ||||||| ||||||| ||||||||| ||||||||| | ||| | |||||||||||||||    
T  16767287 caagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcat 16767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 43331182 - 43331106
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||| ||||  | |||||||||| ||||||||    
T  43331182 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggtacaataatcacctttagattt 43331106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 27847655 - 27847711
Alignment:
Q  135 gattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||  |||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  27847655 gattttattaagaaagattcaagaatgacatgacagaataatcaccgttagatttta 27847711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 37335894 - 37335838
Alignment:
Q  133 atgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||| |||||||||||||| |||| ||||||| | |||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagattt 37335838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 7475569 - 7475494
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| ||||| |||||||||||||||||||||||    
T  7475569 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagatttta 7475494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 21393483 - 21393556
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||| |||||||| | ||||||| ||| ||||||| ||||||| |||||||||||||| ||||    
T  21393483 aaaatgctagatatcaagaatgattt-atcaagaaa-attcaagaatgacatgacacaataatcacccttaaattt 21393556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 21393749 - 21393674
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| ||  |||||  ||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagatttta 21393674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 21936085 - 21936160
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || |||||||  ||| ||||||||||||||||||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagatttta 21936160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 23268123 - 23268048
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  23268123 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 23268048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 33380211 - 33380286
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  |||||||||| |||| | ||||||||||||||||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagatttta 33380286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 43330916 - 43330991
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  ||| ||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  43330916 aatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagatttta 43330991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 3989107 - 3989155
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  3989107 caagaaaattttaagaatgacatggcagaataatcacccttagatttta 3989155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 31174887 - 31174820
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || |||||||  ||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  31174887 atatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 31174820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 27847836 - 27847791
Alignment:
Q  107 tttatggaaaatgctagatatcaataatgattttaacaagaaagat 152  Q
    |||| ||||||||||||||||||| ||| |||||| ||||||||||    
T  27847836 tttaaggaaaatgctagatatcaagaataattttatcaagaaagat 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 40328102 - 40328004
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||| | ||||| ||||| ||||||    
T  40328102 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttaccttt 40328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 33145985 - 33145882
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacct 208  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  33145985 tatgaaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacct 33145887  T
Q  209 ttcat 213  Q
    |||||    
T  33145886 ttcat 33145882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 26613021 - 26612916
Alignment:
Q  108 ttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacc 207  Q
    |||||||||||| |||||||||||||||||||||  |||||||||| ||||||  |||| || ||||||||||||||||||| | ||| | |||||||||    
T  26613021 ttatggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacc 26612922  T
Q  208 tttcat 213  Q
    ||||||    
T  26612921 tttcat 26612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 36864827 - 36864928
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| |||||||||| ||| ||||||| ||||||| ||||||| ||||||||||||||||||| | ||| | |||||||| ||||    
T  36864827 ggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttc 36864926  T
Q  212 at 213  Q
    ||    
T  36864927 at 36864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 47738384 - 47738281
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    |||||||||| |||||||||| |||||||||| ||||||||||| ||||||| |||| || |||||||| |||||||||| | ||| | |||||||||||    
T  47738384 atggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctt 47738285  T
Q  210 tcat 213  Q
    ||||    
T  47738284 tcat 47738281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 24343822 - 24343720
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    |||||||||| |||||||||| |||||||||| ||| ||||||| ||||||| ||||| |  |||||||||||||||||| | ||||| |||||||||||    
T  24343822 atggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctt 24343723  T
Q  210 tca 212  Q
    |||    
T  24343722 tca 24343720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 250
Target Start/End: Complemental strand, 3456340 - 3456197
Alignment:
Q  106 atttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaa 205  Q
    ||||| ||||||||||||||||||| ||||||||| | |||||||||| ||||||| ||||||| | |||||| | |||||||| | ||| | |||||||    
T  3456340 atttaaggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaa 3456242  T
Q  206 cctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
     |||||||          |||||||||||||||||||||||||||    
T  3456241 tctttcataaaaaaaaaatacataacacccaccaccccatgattt 3456197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 19650693 - 19650831
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||||||  ||||||| ||||||| |||||||||| |||||||| | ||| | ||||||| |||    
T  19650693 atggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctt 19650791  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          |||||||||||||||||||||||||||    
T  19650792 tcat-aaaaaaaaatacataacacccaccaccccatgattt 19650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 33114064 - 33113964
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| ||||| | ||||||| |||||    
T  33114064 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttc 33113966  T
Q  212 at 213  Q
    ||    
T  33113965 at 33113964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 33839794 - 33839705
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||| |||||||||| ||||||||||| ||||||| ||||||| |||||||||||||| |||| | ||| | |||||||||||||||    
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcat 33839705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 37522324 - 37522186
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||||  |||||| ||||||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  37522324 tggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatcttt 37522226  T
Q  211 catnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||          |||||||||||||||||||||| ||||    
T  37522225 cataaaaaaaagatacataacacccaccaccccataattt 37522186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 3574321 - 3574458
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||  ||||||| ||||||| ||||||||||  ||||||| | ||| | ||||||| |||||    
T  3574321 ggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttc 3574419  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  3574420 ataaaaaaaaaatacataacacccaccaccccatgattt 3574458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 8320378 - 8320477
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttca 212  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||||    
T  8320378 gaaaatgctagatatcaataatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 8320476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 30385675 - 30385534
Alignment:
Q  107 tttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaac 206  Q
    |||||||||||||||| ||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| | ||| | |||||||     
T  30385675 tttatggaaaatgctaaatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaat 30385577  T
Q  207 ctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||||||          |||||||||||||||||||||||||||    
T  30385576 ctttcat-aaaaataaatacataacacccaccaccccatgattt 30385534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 42921394 - 42921295
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    |||||||||||||| || |||||||||| ||||||| ||||||||||| |||| || || ||||||||||| |||| | ||| | |||||||||||||||    
T  42921394 aaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 3089690 - 3089589
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  3089690 tggaaaatgctagatatcaagaatgatttt-ataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 3089592  T
Q  211 cat 213  Q
    |||    
T  3089591 cat 3089589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 8361834 - 8361910
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||| ||| ||||||| ||||||| |||||||||||||||||||    
T  8361834 ggaaaatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatgacacaataatcacccttagattt 8361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 3137209 - 3137346
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  3137209 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3137307  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          ||||||||||||| |||||||||||||    
T  3137308 atacaaaaaagatacataacacccatcaccccatgattt 3137346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 37216848 - 37216985
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| ||||  | |||||||||| |||||||| | ||| | ||||||| |||||    
T  37216848 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttc 37216946  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          ||||||||||||||||||| |||||||    
T  37216947 ataaaaaaaaaatacataacacccaccaccctatgattt 37216985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 2754991 - 2754889
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||||||||||| |||| || |||||||||| ||| |||| | ||| | ||||||| |||    
T  2754991 atggaaaatgctagatatcaagaatcattttat-aagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctt 2754893  T
Q  210 tcat 213  Q
    ||||    
T  2754892 tcat 2754889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 3574588 - 3574513
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  3574588 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 3574513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 6041888 - 6041963
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttta 6041963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 22426140 - 22426276
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||  |||||||| | ||| | ||||||| |||||    
T  22426140 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttc 22426238  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  22426239 at-aaaaaaaaatacataacacccaccaccccatgattt 22426276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 9796824 - 9796900
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||| || ||||||||| |||||||||    
T  9796824 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatgtcacaataatcactcttagattt 9796900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 34482683 - 34482783
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  34482683 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 34482781  T
Q  212 at 213  Q
    ||    
T  34482782 at 34482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 42297357 - 42297433
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgac-agaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||||| |||||||||||||||||||||||    
T  42297357 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatcacccttagatttta 42297433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 2754721 - 2754796
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||| ||||||||||    
T  2754721 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagatttta 2754796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 3456068 - 3456143
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  ||||||||||  ||| ||||||||||||||||||||||||    
T  3456068 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagatttta 3456143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 11347272 - 11347347
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||| ||||||||||||||    
T  11347272 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagatttta 11347347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 37217114 - 37217039
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||| ||||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaatttta 37217039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 41224504 - 41224422
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatct 195  Q
    ||||||||||||||||||| |||||||| | ||||||| ||| ||||||| |||| || |||||||||||||| |||| |||||    
T  41224504 ggaaaatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatct 41224422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 48160909 - 48160984
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  ||||||||||  ||| ||||||||||||||||||||||||    
T  48160909 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagatttta 48160984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 6042147 - 6042071
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||| || |||||||||| ||||||||    
T  6042147 ggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatggcacaataatcacctttagattt 6042071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 46919164 - 46919088
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||| |||||||||| |||||||||| ||| ||||||| || |||| |||| |||||||||||||  |||||||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagattt 46919088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 37522065 - 37522132
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||  |||||||  |||||||||| |||||||||||||||||||| ||||||||    
T  37522065 atatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatcaccctaagatttta 37522132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 48161176 - 48161100
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| ||||||||| | |||||| ||  ||||| | ||||||| |||||||||| ||||||||    
T  48161176 ggaaaatgctagatatcaagaatgatttt-ataagaaatatccaagaacgacatgacacaataatcacctttagattt 48161100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 8362079 - 8362031
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  8362079 caagaaaaattcaagaatgacatggcagaataatcacccttagatttta 8362031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 19650942 - 19650886
Alignment:
Q  135 gattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||||||  |||||||||| |||| ||||||||||||| ||||||||||    
T  19650942 gattttatcaagaaaattttaagaatgacatggcagaataatcaccattagatttta 19650886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 22426386 - 22426330
Alignment:
Q  135 gattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||||||  ||||| |||| |||| ||||||||||||||||||||||||    
T  22426386 gattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagatttta 22426330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 33839554 - 33839610
Alignment:
Q  135 gattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||| ||| ||||||||||  |||||||||||||||||| ||||||||||    
T  33839554 gattttatcaaaaaaaatttaagaataacatgacagaataatcaccattagatttta 33839610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 3089457 - 3089496
Alignment:
Q  152 tttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  3089457 tttaagaatgacatggcagaataatcacccttagatttta 3089496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 3137475 - 3137400
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| || |||||||||||||||||||||    
T  3137475 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagatttta 3137400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 9797082 - 9797015
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||  ||||||| ||| ||||||| |||| ||||||||||||| ||||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagatttta 9797015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 33113797 - 33113872
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || |||||||  ||||||  || ||||||  |||| ||||||||||||||||||||||||    
T  33113797 aatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatcacccttagatttta 33113872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 33145752 - 33145791
Alignment:
Q  152 tttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  33145752 tttaagaatgacatggcagaataatcacccttagatttta 33145791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 42298090 - 42298032
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||| ||||||| ||||| ||||||||||||| | ||| | |||||||||||||||    
T  42298090 aagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttcat 42298032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 41883257 - 41883209
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||| ||||||    
T  41883257 caagaaaaattcaagaatgacatggcagaataatcacccttaaatttta 41883209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 2477915 - 2477769
Alignment:
Q  103 tttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattat 202  Q
    ||||||| |||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||| || ||| |||||| |||||||| | ||||| ||||    
T  2477915 tttatttttggaaaatgctagatatcaagaatgatttt-ataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttat 2477817  T
Q  203 taacctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||| |||||||          |||||||||||||||||||||||||||    
T  2477816 taatctttcataaaaaaaaaatacataacacccaccaccccatgattt 2477769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 12614532 - 12614633
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||| |||| || |||||||||| |||||||| | ||| | |||||||||||||    
T  12614532 ggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttc 12614631  T
Q  212 at 213  Q
    ||    
T  12614632 at 12614633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 33584121 - 33584261
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacct 208  Q
    |||||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||    
T  33584121 tatggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 33584219  T
Q  209 ttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||||          |||||||||||||||||||||||||||    
T  33584220 ttcataaaaaaaagatacataacacccaccaccccatgattt 33584261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 27482074 - 27481955
Alignment:
Q  132 aatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttaga-ttttaatcttaattattaacctttcatnnnnnnnnnntacataa 230  Q
    |||||||||| ||| ||||||| ||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||||| ||          |||||||    
T  27482074 aatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttttataaaaaaaaaatacataa 27481975  T
Q  231 cacccaccaccccatgattt 250  Q
    ||||||||||||||||||||    
T  27481974 cacccaccaccccatgattt 27481955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 4892472 - 4892335
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  4892472 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 4892374  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  4892373 attaaaagaagatacataacacccaccaccccatgattt 4892335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 6043304 - 6043407
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacct 208  Q
    |||||||||||||||||||||| ||||||||||  |||||| ||||||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||    
T  6043304 tatggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 6043402  T
Q  209 ttcat 213  Q
    |||||    
T  6043403 ttcat 6043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 3521802 - 3521938
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||||  |||||| ||||||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  3521802 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3521900  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  3521901 at-aaaaaaagatacataacacccaccaccccatgattt 3521938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 14138937 - 14138801
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||||||||||| || ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| ||||| | ||||||| |||||    
T  14138937 ggaaaatgctagatattaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttc 14138839  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  14138838 at-aaaaaaaaatacataacacccaccaccccatgattt 14138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 8145644 - 8145543
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  8145644 tggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 8145546  T
Q  211 cat 213  Q
    |||    
T  8145545 cat 8145543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 22912852 - 22912928
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||| || |||||||||||||||||||    
T  22912852 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagattt 22912928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 3363048 - 3362949
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttca 212  Q
    |||||||||||||||||| ||||||||||  |||||| ||||||||||| ||||||| ||||| |||| |||||||| | ||| | ||||||| ||||||    
T  3363048 gaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttca 3362950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 25398508 - 25398371
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| || |||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  25398508 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 25398410  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  25398409 ataaaaaaaagatacataacacccaccaccccatgattt 25398371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 37321588 - 37321725
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| |||||||  ||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  37321588 ggaaaatgctagatatcaagaatgatttt-ataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttc 37321686  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  37321687 ataaataaaaaatacataacacccaccaccccatgattt 37321725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 2477640 - 2477715
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  2477640 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 2477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 11361192 - 11361117
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 11361117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 12614794 - 12614719
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| ||  |||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagatttta 12614719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 38899518 - 38899658
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||||  || ||| ||| ||||||| |||| || ||||| |||| |||||||| | ||| | ||||||| |||    
T  38899518 atggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctt 38899617  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          || ||||||||||||||||||||||||    
T  38899618 tcataaaaaaaagatatataacacccaccaccccatgattt 38899658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 17545477 - 17545553
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||| ||| ||||||||||| ||||||| |||||||| ||||||||||    
T  17545477 ggaaaatgctagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatcatccttagattt 17545553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 4892206 - 4892281
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  4892206 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 4892281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 22913115 - 22913040
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  ||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagatttta 22913040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 25398242 - 25398317
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 25398317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 6043572 - 6043497
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| ||||  |||||||||||||||||||||||    
T  6043572 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagatttta 6043497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 8145387 - 8145454
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 8145454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 33584390 - 33584315
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  |||||||||| |||| ||||||||||||||||| ||||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaatttta 33584315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 12851069 - 12850972
Alignment:
Q  115 aaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    |||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || ||||| |||| |||||||| | ||| | ||||||| |||||||    
T  12851069 aaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 12850972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 31640766 - 31640872
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcatnnnnnnnnnntacataacacccaccaccc 242  Q
    ||||||||||| ||||||| |||| ||||||||||  | |||||||   |||||| |||||||||||||||          |||||||||||||||||||    
T  31640766 caagaaagattcaagaatgacatggcagaataatcgactttagattgatatcttatttattaacctttcat-aaaaaaaaatacataacacccaccaccc 31640864  T
Q  243 catgattt 250  Q
    ||||||||    
T  31640865 catgattt 31640872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 31640974 - 31640926
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||    
T  31640974 caagaaagattcaagaatgacatggcagaataaccacccttagatttta 31640926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 37321835 - 37321779
Alignment:
Q  135 gattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||||||  |||||||||| |||| ||||||||||||||||| ||||||    
T  37321835 gattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaatttta 37321779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 3362782 - 3362857
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |  ||||||| |||| |||||||| |||||||||||||||    
T  3362782 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagatttta 3362857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 13664792 - 13664737
Alignment:
Q  150 gatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaa 205  Q
    |||| ||||||| ||||| ||||||||||||||||||||| | ||||| |||||||    
T  13664792 gattcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaa 13664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 38899787 - 38899712
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |  ||||||| |||| |||||||| |||||||||||||||    
T  38899787 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagatttta 38899712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 17545719 - 17545671
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||| ||||||| |||| ||||||||||||| ||||||||||    
T  17545719 caagaaaaattcaagaatgacatggcagaataatcaccattagatttta 17545671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 42612081 - 42611944
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||| || |||||||||| |||||||| | ||||| ||||||| |||||    
T  42612081 ggaaaatgctagatatcaagaatgatttt-ataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttc 42611983  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  42611982 ataaaaaaaaaatacataacacccaccaccccatgattt 42611944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 29737406 - 29737314
Alignment:
Q  121 tagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    |||||||||| |||||||||| ||||||||||||||||||  |||| || ||||||||||||||||||| | ||| | |||||||||||||||    
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcat 29737314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 4974532 - 4974667
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    ||||||||||||||||| ||||||||||  || ||||||| ||||||| |||| || ||||||||||||||||||| | ||| | |||||||||||||||    
T  4974532 aaaatgctagatatcaagaatgattttataaa-aaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 4974630  T
Q  214 nnnnnnnnnntacataacacccaccaccccatgattt 250  Q
              |||||||||||||||||| ||||||||    
T  4974631 aaaaaaaaaatacataacacccaccacctcatgattt 4974667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 18037247 - 18037171
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||  | |||||||||||||||||||    
T  18037247 ggaaaatgctagatatcaacaatgattt-atcaagaaagatttaagaatgacatggtacaataatcacccttagattt 18037171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 24395243 - 24395105
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | || ||||||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||    
T  24395243 atggaaaatgctagatatcaagaatgatttt-ataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 24395145  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          |||||||||||||||||||||||||||    
T  24395144 tcat-aaaaataaatacataacacccaccaccccatgattt 24395105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 42696354 - 42696253
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||| ||||||||||||||||||||| ||| ||| ||| ||||||| ||||  | ||||||||||||||||||| | ||| | |||||||| ||||    
T  42696354 ggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttc 42696255  T
Q  212 at 213  Q
    ||    
T  42696254 at 42696253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 20009895 - 20009991
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||| |||||||||  |||||||||| ||| ||||||| ||||||| ||||||| ||||||||  ||||||||||| ||| | ||||||||||||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaaccttt 20009991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 37476876 - 37476951
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||| |||| || |||||||||||||||||||    
T  37476876 gaaaatgctagatatcaagaatgattt-atcaagaaagatttaataatgacatggcacaataatcacccttagattt 37476951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 3961983 - 3962058
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| |||||||||||||||||||||| ||||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaatttta 3962058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 15329277 - 15329352
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||    
T  15329277 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttta 15329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 48880988 - 48880913
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttta 48880913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 15238654 - 15238578
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||| ||| ||||||||||| ||||||| |||||||| ||||||||||    
T  15238654 ggaaaatgctagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatcatccttagattt 15238578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 35445667 - 35445567
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| |||||||  |||||| |||||||||| |||||||| | ||| | ||||||| |||||    
T  35445667 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttc 35445569  T
Q  212 at 213  Q
    ||    
T  35445568 at 35445567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 45637981 - 45637881
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||||||||||| || ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  45637981 ggaaaatgctagatattaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 45637883  T
Q  212 at 213  Q
    ||    
T  45637882 at 45637881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 48880722 - 48880859
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||  |||||||| | | | | ||||||| |||||    
T  48880722 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttc 48880820  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  48880821 ataaaaaaaagatacataacacccaccaccccatgattt 48880859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 3962248 - 3962112
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||  ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  3962248 ggaaaatgctagatatcaagaatgatttt-ataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3962150  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  3962149 at-aaaaaaaaatacataacacccaccaccccatgattt 3962112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 4974796 - 4974721
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 4974721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 34482839 - 34482914
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || |||||||  ||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagatttta 34482914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 35876516 - 35876414
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||| || ||| |||| |||| || |||||||||| |||||||| | ||| | ||||||| |||    
T  35876516 atggaaaatgctagatatcaagaatgatttt-ataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 35876418  T
Q  210 tcat 213  Q
    ||||    
T  35876417 tcat 35876414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 36790269 - 36790336
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatc 177  Q
    ||||||||||||| |||||||||||| ||||| ||| ||||||| ||||||| ||||||| |||||||    
T  36790269 atggaaaatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc 36790336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 42611815 - 42611890
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 42611890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 45637716 - 45637791
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  45637716 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 45637791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 15577642 - 15577739
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    ||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  15577642 ggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatcttt 15577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 25167651 - 25167727
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| ||||||||    
T  25167651 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagattt 25167727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 15577911 - 15577836
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||| ||||    
T  15577911 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagacttta 15577836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 18036990 - 18037057
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||  ||||||| ||||||||||| |||| ||||||||||||||||| ||||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaatttta 18037057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 30848841 - 30848739
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| |||| |||| | |||||| ||| ||||||| |||| || |||||||||| ||| |||| | ||| | ||||||| |||    
T  30848841 atggaaaatgctagatatcaagaatgctttt-ataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctt 30848743  T
Q  210 tcat 213  Q
    ||||    
T  30848742 tcat 30848739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 36790527 - 36790452
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || | ||||| ||||||| ||||||||||| |||| ||||||||| ||||||| ||||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaatttta 36790452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 37477141 - 37477066
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  ||||||| ||||||||||| |||| ||||||||||| ||||| ||||||    
T  37477141 aatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatcatccttaaatttta 37477066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 15329544 - 15329444
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||||||||||| || ||||||||| | |||||| ||| ||||||| |||| || |||||||||  |||||||| | ||| | ||||||| |||||    
T  15329544 ggaaaatgctagatataaagaatgatttt-ataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttc 15329446  T
Q  212 at 213  Q
    ||    
T  15329445 at 15329444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 20010158 - 20010084
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  || ||||||| ||| |||||||||||||||||||||||||    
T  20010158 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat-acagaataatcacccttagatttta 20010084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 25167911 - 25167836
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||   ||||||  |||||||||| |||| ||||||||||| ||||||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagatttta 25167836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 29737143 - 29737218
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||   ||||||  |||||||||| ||||  |||||||||||||||||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagatttta 29737218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 35444562 - 35444637
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| || || ||||||  |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  35444562 aatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 35444637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 15238413 - 15238461
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||| ||||||| |||| ||||||||||||| ||||||||||    
T  15238413 caagaaaaattcaagaatgacatggcagaataatcaccattagatttta 15238461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 30848600 - 30848648
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||  |||||||||| |||| ||||||||||| ||||||||||||    
T  30848600 caagaaaattttaagaatgacatggcagaataatcatccttagatttta 30848648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 44690818 - 44690914
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||  | ||||| ||||||| ||||    
T  44690818 aaaatgttagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttt 44690914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 52064373 - 52064445
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttag 185  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||||||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 27523050 - 27523151
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    |||||||| || ||||||| |||||||||| ||||||||||| |||||| | ||| |||| ||||||||||| ||||||| ||||| |||||||| ||||    
T  27523050 ggaaaatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttc 27523149  T
Q  212 at 213  Q
    ||    
T  27523150 at 27523151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 37821628 - 37821766
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    |||||||||||||||||||| ||||||||| | |||||| ||| ||||||| ||||||| |||||||||| |||||||| | ||| | ||||||| ||||    
T  37821628 tggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatcttt 37821726  T
Q  211 catnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||          ||||||||||||| |||||||||||||    
T  37821727 cataaaaaaaagatacataacacccaacaccccatgattt 37821766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 25463946 - 25463809
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||  ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  25463946 ggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttc 25463848  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  25463847 ataaaaaaaaaatacataacacccaccaccccatgattt 25463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 32000058 - 32000137
Alignment:
Q  109 tatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||| || |||||||||||||||||||    
T  32000058 tatggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagattt 32000137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 51737775 - 51737638
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  51737775 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 51737677  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  51737676 ataaaaaaaagatacataacacccaccaccccatgattt 51737638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 25973681 - 25973542
Alignment:
Q  108 ttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacc 207  Q
    ||||||||||||||||||||||| ||||||||| | |||||| ||| ||||||| ||||||| |||||||||| ||| |||| | ||| | ||||||| |    
T  25973681 ttatggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatc 25973583  T
Q  208 tttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||||          |||||||||||||||||||||||||||    
T  25973582 tttcat--aaaaaaaatacataacacccaccaccccatgattt 25973542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 40215257 - 40215121
Alignment:
Q  113 gaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttca 212  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||| | ||| | |||||||  |||||    
T  40215257 gaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatatttca 40215159  T
Q  213 tnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |          |||||||||||||||||||||||||||    
T  40215158 taaaaaaaaaatacataacacccaccaccccatgattt 40215121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 18404718 - 18404618
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||| |||| || |||||||||  |||||||| | ||| | ||||||| |||||    
T  18404718 ggaaaatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttc 18404620  T
Q  212 at 213  Q
    ||    
T  18404619 at 18404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 33786426 - 33786502
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||| || |||||||||||||||||||    
T  33786426 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagattt 33786502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 6883757 - 6883620
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||| ||||| |||||||| | ||| | ||||||| |||||    
T  6883757 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttc 6883659  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  6883658 ataaaaaaaagatacataacacccaccaccccatgattt 6883620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 19015674 - 19015537
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||| ||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  19015674 ggaaaatgctacatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 19015576  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  19015575 atacaaaaaagatacataacacccaccaccccatgattt 19015537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 36966503 - 36966640
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||  |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  36966503 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttc 36966601  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  36966602 ataaaaaaaagatacataacacccaccaccccatgattt 36966640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 41876237 - 41876374
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||  || |||||||||| |||||||| | ||| | ||||||| |||||    
T  41876237 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 41876335  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  41876336 ataaaaaaaagatacataacacccaccaccccatgattt 41876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 44094967 - 44094831
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||| ||||| | |||||||||  ||||||| ||||||| |||||||||| |||||||| | ||| | ||||||| |||||    
T  44094967 ggaaaatgctagatatcaagaattatttt-ataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 44094869  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||||||||||||||    
T  44094868 at-aaagaaaaatacataacacccaccaccccatgattt 44094831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 20304925 - 20305001
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||| || |||||||||| ||||||||    
T  20304925 ggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatggcacaataatcacctttagattt 20305001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 33786696 - 33786621
Alignment:
Q  115 aaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||||||||||| |||||||| | ||||||||||| ||||||| |||| || |||||||||||||| ||||||    
T  33786696 aaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttaaatttta 33786621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 16045859 - 16045784
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 16045784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 25463680 - 25463755
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || |||||||  ||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  25463680 aatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagatttta 25463755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 27523296 - 27523241
Alignment:
Q  136 attttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  27523296 attttatcaagaaaaatttaagaatgacatgacagaataatcacccttaaatttta 27523241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 32000328 - 32000253
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  ||||||| ||| ||||||| ||||||||||||| |||||||||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagatttta 32000253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 40214992 - 40215067
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 40215067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 40273706 - 40273781
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||||||||||| || ||||||  ||||||| ||| ||||||| |||| || |||||||||||||||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagatttta 40273781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 40273976 - 40273902
Alignment:
Q  114 aaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattt 189  Q
    ||||||||||||||||| |||||||| | ||||||| ||| ||||||| |||| || |||||||||||||||||||    
T  40273976 aaaatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttagattt 40273902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 3559887 - 3559787
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||||||  |||||||  |||||| |||||||||| ||| |||| | ||| | ||||||| |||||    
T  3559887 ggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttc 3559789  T
Q  212 at 213  Q
    ||    
T  3559788 at 3559787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 3559621 - 3559696
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  |||||||||| |||| ||||||||||||||||| ||||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaatttta 3559696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 18404446 - 18404521
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  |||||||||| ||||  |||||||||||| ||||||||||    
T  18404446 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagatttta 18404521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 44094702 - 44094777
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| ||  |||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 44094777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 52329508 - 52329445
Alignment:
Q  150 gatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    |||| ||||||| |||  |||||||||||||||||||||| | |||||||||||||| ||||||    
T  52329508 gattcaagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcat 52329445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 9910354 - 9910279
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||| ||||||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagatttta 9910279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 19015408 - 19015483
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || |||||||  ||| ||||||||||||||||||||||||    
T  19015408 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagatttta 19015483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 22157370 - 22157433
Alignment:
Q  150 gatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttcat 213  Q
    |||||||||||| ||||  ||||||||||| |||| |||| ||||||| |||||||| ||||||    
T  22157370 gatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaacatttcat 22157433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 36966769 - 36966694
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || |||||||  ||| ||||||||||||||||||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagatttta 36966694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 37821895 - 37821820
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || |||||||  ||| ||||||||||||||||||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagatttta 37821820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 41876503 - 41876428
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  ||| |||  |||||||||| |||| |||||||||||||||||| |||||    
T  41876503 aatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttaggtttta 41876428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 6883530 - 6883566
Alignment:
Q  155 aagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  6883530 aagaatgacatggcagaataatcacccttagatttta 6883566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 10167431 - 10167479
Alignment:
Q  143 caagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||||||||||||||| ||||| ||||||||||   ||||||||||    
T  10167431 caagaaagatttaagaatgacatgatagaataatcatttttagatttta 10167479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 250
Target Start/End: Complemental strand, 4677 - 4529
Alignment:
Q  101 aatttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaatt 200  Q
    |||||| | ||||||||||||||||||||| ||||||||| | |||||| |||||||||||  ||| || |||||||||| |||||||| | ||| | ||    
T  4677 aatttaataatggaaaatgctagatatcaagaatgatttt-ataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcattt 4579  T
Q  201 attaacctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||| |||||||          |||||||||||||||||||||||||||    
T  4578 attaatctttcataaaaaacagatacataacacccaccaccccatgattt 4529  T

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Target: scaffold0204; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 4400 - 4475
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  |||||||||| |||| ||||||||||||||||||||||||    
T  4400 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagatttta 4475  T

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Target: scaffold0471 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 13122 - 12975
Alignment:
Q  102 atttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaatta 201  Q
    ||||||||| | ||||||||||||||||| ||||||||||  |||||| ||||||||||| ||||||| |||||| ||| |||||||| | ||| | |||    
T  13122 atttatttaagaaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcattta 13024  T
Q  202 ttaacctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||| |||||||          ||||||||| |||||||||||||||||    
T  13023 ttaatctttcataaaaaaaagatacataacatccaccaccccatgattt 12975  T

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Target: scaffold0471; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 12846 - 12921
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||  |||||||  || ||||||| |||| ||||||||||| ||||||||||||    
T  12846 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagatttta 12921  T

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Target: scaffold0178 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 11892 - 11754
Alignment:
Q  111 tggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaaccttt 210  Q
    ||||||||| |||||||||| ||||||||||  |||||| ||||||||||| |||| || |||||||||| |||||||| | ||| | ||||||| ||||    
T  11892 tggaaaatgttagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 11794  T
Q  211 catnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||          |||||||||| ||||||||||||||||    
T  11793 cataaaaaaaaaatacataacactcaccaccccatgattt 11754  T

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Target: scaffold0178; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 11625 - 11700
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttta 11700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 45; Significance: 9e-17; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 26206 - 26069
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||||| |||||||| | ||| | ||||||| |||||    
T  26206 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 26108  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||| ||||||||||    
T  26107 ataaaaaaaagatacataacacccaccatcccatgattt 26069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 16254 - 16117
Alignment:
Q  112 ggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctttc 211  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| ||||||| |||| || |||||||| | |||||||| | ||| | ||||||| |||||    
T  16254 ggaaaatgctagatatcaagaatgatttt-ataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttc 16156  T
Q  212 atnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||          |||||||||||||||| ||||||||||    
T  16155 ataaaaaaaagatacataacacccaccatcccatgattt 16117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 8414 - 8481
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 8481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 15996 - 16063
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 16063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 25948 - 26015
Alignment:
Q  124 atatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 26015  T

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Target: scaffold0085 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 48121 - 47983
Alignment:
Q  110 atggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaattattaacctt 209  Q
    ||||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||  || |||||||| | |||||||| | ||| | ||||||| |||    
T  48121 atggaaaatgctagatatcaagaatgatttt-ataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctt 48023  T
Q  210 tcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    ||||          |||||||||||||||||||||||||||    
T  48022 tcat-aaaaataaatacataacacccaccaccccatgattt 47983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 47854 - 47929
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    |||||||  |||||| || ||||||| |||||||  || ||||||| |||| ||||||||||||||||||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 47929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 3072 - 3147
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  |||||||||| |||| ||||||||||||||||||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagatttta 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 41290 - 41144
Alignment:
Q  102 atttatttatggaaaatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagattttaatcttaatta 201  Q
    |||| ||| |||||||||||||||||||| ||||||||| | |||||||||  |||||||  |||  | |||||||||| |||||||| | ||| | |||    
T  41290 atttttttttggaaaatgctagatatcaagaatgatttt-ataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcattta 41192  T
Q  202 ttaacctttcatnnnnnnnnnntacataacacccaccaccccatgattt 250  Q
    |||| |||||||          |||||||||||||||||||||||||||    
T  41191 ttaatctttcat-aaaaaaaaatacataacacccaccaccccatgattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 41015 - 41090
Alignment:
Q  116 aatgctagatatcaataatgattttaacaagaaagatttaagaatggcatgacagaataatcacccttagatttta 191  Q
    ||||||| ||||||| || ||||||| ||| |||  || ||||||| |||| ||||||||||||||||||||||||    
T  41015 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagatttta 41090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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