View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0607_low_13 (Length: 309)
Name: NF0607_low_13
Description: NF0607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0607_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 24845234 - 24845458
Alignment:
| Q |
1 |
aattttcttgttccaacatatgcttaagtgtgcagataaaaaggcccaagttgtgcctcaggtgaaaaagaatatcaagaccaaattacaagtcgtttct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
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| T |
24845234 |
aattttcttgttccaacatatgcttaagtgtgcagataaaaaggcccaagttgtgccttaggtgaaaaagaatatcaagaccaaattacaagtcgttcct |
24845333 |
T |
|
| Q |
101 |
ctggtatcgagtctcccgtcaaagtcgaaaacaatgaatgttttcgagaaacgtgactctagctccgaagagatccatcatcttgccaccatcatcagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24845334 |
ctggtatcgagtctcccgtcaaagtcgaaaacaatgaatgttttcgagaaacgtgactctagctccgaagagatccatcatcttgccaccatcatcagtt |
24845433 |
T |
|
| Q |
201 |
ttagacaagcatgtcctctagtggcacaat |
230 |
Q |
| |
|
|||||| ||||||||||||||||||| |
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|
| T |
24845434 |
ttagac-----tgtcctctagtggcacaat |
24845458 |
T |
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