View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0607_low_3 (Length: 480)
Name: NF0607_low_3
Description: NF0607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0607_low_3 |
 |  |
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[»] scaffold0021 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr4 (Bit Score: 338; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 52 - 452
Target Start/End: Original strand, 7171293 - 7171702
Alignment:
Q |
52 |
gtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaatccacctttatactcgaaaggggattactgaagctttacaaca |
151 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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|
T |
7171293 |
gtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaatccacctttatattcgaaaggggattactgaagctttacaaca |
7171392 |
T |
 |
Q |
152 |
aattacacaattgttattgtgattttgatctttgcaaagaattaattagatttcagagtgacctctctatgttccaaccgattacactaaagtgaatcta |
251 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
7171393 |
aattacacaattgttattgtgattttgatctttgcaaagaattaattagatttcagagtgacctctctatgttccaaccgatcacactaaagtgaatcta |
7171492 |
T |
 |
Q |
252 |
aacatttatttttctaagtttattatgatcacagacatgtgaatatgaacttttcaaatacactataaaatatgtcccaaagatataat---------ag |
342 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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|
T |
7171493 |
aacatttatttttctaagtttattatgatcacaaacatgtgaatatgaacttttcaaatacactataaaatatgtcccaaagatataatggaggcttgag |
7171592 |
T |
 |
Q |
343 |
tgtatttgtgtttgcaatccaatgttagagaatatatttggatatttttcaaaacaatttgatcttttctacttctgatattcttcgagatgcagaaatt |
442 |
Q |
|
|
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |
|
|
T |
7171593 |
cgtatttgtgtttgcaatctaatgttagtgaatatatttggatatttttcaaaacaatttgatcttttctacttctgatcttttttcagatgcagaaatt |
7171692 |
T |
 |
Q |
443 |
cttgacataa |
452 |
Q |
|
|
|||||||||| |
|
|
T |
7171693 |
cttgacataa |
7171702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 6 - 452
Target Start/End: Original strand, 7169848 - 7170290
Alignment:
Q |
6 |
tgtttgagatagcctctcggattttgcacactttctcttctttttggtctacttgaccatata----agttttgcacatcctcttcagactttaatcgac |
101 |
Q |
|
|
||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||||||||||||| |
|
|
T |
7169848 |
tgtttgagataccctctcgaattttgcaaactttctcttctttttggtctacttgaccatatatataagtattgggcatccccttcagactttaatcgac |
7169947 |
T |
 |
Q |
102 |
cacacaatccacctttatactcgaaaggggattactgaagctttacaacaaattacacaattgttattgtgattttgatctttgcaaagaattaattaga |
201 |
Q |
|
|
|||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
T |
7169948 |
cacacaatccacctttataccctaaataggattaccgaagctttacaacaaattacacaattgttattgtgattttgat---------------ataaga |
7170032 |
T |
 |
Q |
202 |
tttcagagtgacctctctatgttccaaccgattacactaaagtgaatctaaacatttatttttctaagtttattatgatcacagacatgtgaatatgaac |
301 |
Q |
|
|
| | | |||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||| |
|
|
T |
7170033 |
tcttatggtgacctctctaggttcaaactgatcgcactaaagtgaatctaaacatttatttttctaagtttcatatgatcacacacatgtaaatatgaac |
7170132 |
T |
 |
Q |
302 |
ttttcaaatacactataaaatatgtcccaaagatataat---------agtgtatttgtgtttgcaatccaatgttagagaatatatttggatatttttc |
392 |
Q |
|
|
||||||||||||||||| || |||| ||| ||||||||| |||||||||||| |||||||| |||||| |||||||||||||||| ||||| |
|
|
T |
7170133 |
ttttcaaatacactatagaagatgttccagagatataatggaggcttgagtgtatttgtgcttgcaatctaatgtttgagaatatatttggatcttttt- |
7170231 |
T |
 |
Q |
393 |
aaaacaatttgatcttttctacttctgatattcttcgagatgcagaaattcttgacataa |
452 |
Q |
|
|
||||||| ||||||||||||||| |||| || || ||||| || ||||||||||||||| |
|
|
T |
7170232 |
taaacaatctgatcttttctacttttgatctt-tttgagatacataaattcttgacataa |
7170290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 8321513 - 8321616
Alignment:
Q |
18 |
cctctcggattttgcacactttctcttc-tttttggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaatccacctt |
116 |
Q |
|
|
|||||| ||| ||||||||||||||||| ||| |||||| ||||||| || |||||||| ||| |||||| ||||||| | | | || |||||||||||| |
|
|
T |
8321513 |
cctctcagatgttgcacactttctcttcatttctggtctccttgaccttacaagttttggacaacctctttagacttt-agctatcatacaatccacctt |
8321611 |
T |
 |
Q |
117 |
tatac |
121 |
Q |
|
|
||||| |
|
|
T |
8321612 |
tatac |
8321616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 19993810 - 19993980
Alignment:
Q |
32 |
cacactttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaatccacctttatactcgaaaggg |
130 |
Q |
|
|
|||||||||||||||||| |||||||| | || ||| ||| ||| ||| |||||||||| |||| | ||||||||||||||||| |||| | |||| | |
|
|
T |
19993810 |
cacactttctcttcttttctggtctacctaacaatacaagatttagacaacctcttcagattttag-ctaccacacaatccaccttaataccctaaagag |
19993908 |
T |
 |
Q |
131 |
gattactgaagctttacaacaaattacacaattgttattgtgattttgatctttgcaaagaattaattagat |
202 |
Q |
|
|
||||| |||||||||||| | |||| ||||||||| ||||||| ||||||||| ||||||| |||||||| |
|
|
T |
19993909 |
gattagtgaagctttacatcttattatacaattgttcttgtgatcttgatctttaaaaagaatcaattagat |
19993980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 156630 - 156520
Alignment:
Q |
10 |
tgagatagcctctcggattttgcacactttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaa |
108 |
Q |
|
|
||||||| |||||| || | ||||| |||||||||||||| |||||||||| ||||||||||||||| ||| ||| |||||||||||| | |||| |||| |
|
|
T |
156630 |
tgagataccctctcagaatctgcac-ctttctcttcttttctggtctacttaaccatataagttttggacagcctattcagactttaagctaccatacaa |
156532 |
T |
 |
Q |
109 |
tccacctttata |
120 |
Q |
|
|
|| ||||||||| |
|
|
T |
156531 |
tcaacctttata |
156520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 25427571 - 25427736
Alignment:
Q |
37 |
tttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaatccacctttatactcgaaaggggatta |
135 |
Q |
|
|
||||||||||||| |||||||| |||||||| | |||| ||| |||||| |||||||| | |||||||||||| |||||||| | |||| ||| || |
|
|
T |
25427571 |
tttctcttcttttctggtctacctgaccatactatttttagacagtctcttcggactttaagctaccacacaatcctcctttataacc-aaagaggaata |
25427669 |
T |
 |
Q |
136 |
ctgaagctttacaacaaattacacaattgttattgtgattttgatctttgcaaagaattaattagat |
202 |
Q |
|
|
||||||||||||| |||||| || |||||||||||| ||||| ||| |||||||| |||||||| |
|
|
T |
25427670 |
atgaagctttacaattgattacataaatgttattgtgatcttgatttttacaaagaatcaattagat |
25427736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 183
Target Start/End: Complemental strand, 17622137 - 17621964
Alignment:
Q |
10 |
tgagatagcctctcggattttgcacactttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaa |
108 |
Q |
|
|
||||||| ||||| |||||| ||||||||||| || ||| | |||||||| |||||| |||||||| || ||| ||| ||||||| | ||||||||| |
|
|
T |
17622137 |
tgagataccctcttagattttacacactttctcgtcatttctagtctactttaccatacaagttttgagcagccttttcggactttagtt-accacacaa |
17622039 |
T |
 |
Q |
109 |
tccacctttatactcgaaaggggattactgaagctttacaacaaattacacaattgttattgtgattttgatctt |
183 |
Q |
|
|
|||||||||||| |||| ||||| ||||||||||||| ||||||||||||| ||||||||| |||||| |
|
|
T |
17622038 |
tccacctttatagcataaagaggattggtgaagctttacaaatgcttacacaattgttcttgtgatttcgatctt |
17621964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 26646072 - 26645949
Alignment:
Q |
25 |
gattttgcacactttctcttctttttggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaatccacctttat-actc |
123 |
Q |
|
|
|||| ||||||| || ||||| || |||| |||||| ||||| ||||||| |||| ||||||||||||||| | |||||||||||||||||||| |||| |
|
|
T |
26646072 |
gattctgcacacattatcttcattctggtttacttggccatacaagttttagacatgctcttcagactttaa-ctaccacacaatccacctttataactc |
26645974 |
T |
 |
Q |
124 |
gaaaggggattactgaagctttacaa |
149 |
Q |
|
|
|||| ||||| ||||||||||||| |
|
|
T |
26645973 |
-aaagaagattagtgaagctttacaa |
26645949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 11993899 - 11993788
Alignment:
Q |
9 |
ttgagatagcctctcggattttgcacactttctcttctttttggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaa |
108 |
Q |
|
|
|||||||| |||||| |||| | |||||||||||||||||||||||| ||||| || |||||||| ||| ||||||| |||||| | ||||||||| |
|
|
T |
11993899 |
ttgagataccctctcagattccgaacactttctcttctttttggtctatctgaccttacaagttttggacaggctcttcaatctttaa-ctaccacacaa |
11993801 |
T |
 |
Q |
109 |
tccacctttatac |
121 |
Q |
|
|
|| |||||||||| |
|
|
T |
11993800 |
tctacctttatac |
11993788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 222 - 320
Target Start/End: Complemental strand, 13091144 - 13091047
Alignment:
Q |
222 |
gttccaaccgattacactaaagtgaatctaaacatttatttttctaagtttattatgatcacagacatgtgaatatgaacttttcaaatacactataaa |
320 |
Q |
|
|
|||| |||||||||||||| ||||||| |||| ||| ||| |||||||| | | |||||||| ||||||||||||||| ||||||||| |||||||| |
|
|
T |
13091144 |
gttcaaaccgattacactag-gtgaatccaaacttttgtttctctaagttcaatctgatcacacacatgtgaatatgaaattttcaaatgtactataaa |
13091047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 26645789 - 26645739
Alignment:
Q |
290 |
gtgaatatgaacttttcaaatacactataaaatatgtcccaaagatataat |
340 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||| |||||||| |||| |
|
|
T |
26645789 |
gtgaatatgaacttttcaaatacactataaaagatgttccaaagatgtaat |
26645739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 10916705 - 10916667
Alignment:
Q |
302 |
ttttcaaatacactataaaatatgtcccaaagatataat |
340 |
Q |
|
|
|||||||||||||||||||| |||| ||||||||||||| |
|
|
T |
10916705 |
ttttcaaatacactataaaagatgttccaaagatataat |
10916667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 35395198 - 35395244
Alignment:
Q |
18 |
cctctcggattttgcacactttctcttc-tttttggtctacttgacc |
63 |
Q |
|
|
|||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
35395198 |
cctctcggatggtgcacactttctcttcatttttggtctacttgacc |
35395244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 26330497 - 26330545
Alignment:
Q |
68 |
aagttttgcacatcctcttcagactttaatcgaccacacaatccaccttt |
117 |
Q |
|
|
|||||||| ||| |||||||||||||||| | |||||||||||||||||| |
|
|
T |
26330497 |
aagttttggacaacctcttcagactttaa-caaccacacaatccaccttt |
26330545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 15984102 - 15984146
Alignment:
Q |
50 |
tggtctacttgaccatataagttttgcacatcctcttcagacttt |
94 |
Q |
|
|
||||||||| |||| || |||||||||||||||||| |||||||| |
|
|
T |
15984102 |
tggtctactcgaccttacaagttttgcacatcctctccagacttt |
15984146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 336
Target Start/End: Complemental strand, 11434179 - 11434086
Alignment:
Q |
243 |
gtgaatctaaacatttatttttctaagtttattatgatcacagacatgtgaatatgaacttttcaaatacactataaaatatgtcccaaagata |
336 |
Q |
|
|
|||||||| ||| ||| ||| | |||||| | | |||||||| ||| |||||| |||||||||||||||||||||||||||| | ||||||||| |
|
|
T |
11434179 |
gtgaatctgaacttttgtttatataagttcaatctgatcacacacaagtgaatttgaacttttcaaatacactataaaatatattccaaagata |
11434086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 260735 - 260596
Alignment:
Q |
10 |
tgagatagcctctcggattttgcacactttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaa |
108 |
Q |
|
|
||||||| |||||| |||| | |||| ||||||||||||| |||||||| | ||| || |||||| ||| | |||||| |||||| | |||||| || |
|
|
T |
260735 |
tgagataccctctcagattcttcacattttctcttcttttatggtctacctaaccttacaagtttaacactacatcttcatactttag-ctaccacataa |
260637 |
T |
 |
Q |
109 |
tccacctttatactcgaaaggggattactgaagctttacaa |
149 |
Q |
|
|
||||||||||||| |||| | |||| ||||||||||||| |
|
|
T |
260636 |
tccacctttataccataaagagaattagtgaagctttacaa |
260596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 655186 - 655325
Alignment:
Q |
10 |
tgagatagcctctcggattttgcacactttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaa |
108 |
Q |
|
|
||||||| |||||| |||| | |||| ||||||||||||| |||||||| | ||| || |||||| ||| | |||||| |||||| | |||||| || |
|
|
T |
655186 |
tgagataccctctcagattcttcacattttctcttcttttatggtctacctaaccttacaagtttaacactacatcttcatactttag-ctaccacataa |
655284 |
T |
 |
Q |
109 |
tccacctttatactcgaaaggggattactgaagctttacaa |
149 |
Q |
|
|
||||||||||||| |||| | |||| ||||||||||||| |
|
|
T |
655285 |
tccacctttataccataaagagaattagtgaagctttacaa |
655325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 840921 - 841060
Alignment:
Q |
10 |
tgagatagcctctcggattttgcacactttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaa |
108 |
Q |
|
|
||||||| |||||| |||| | |||| ||||||||||||| |||||||| | ||| || |||||| ||| | |||||| |||||| | |||||| || |
|
|
T |
840921 |
tgagataccctctcagattcttcacattttctcttcttttatggtctacctaaccttacaagtttaacactacatcttcatactttag-ctaccacataa |
841019 |
T |
 |
Q |
109 |
tccacctttatactcgaaaggggattactgaagctttacaa |
149 |
Q |
|
|
||||||||||||| |||| | |||| ||||||||||||| |
|
|
T |
841020 |
tccacctttataccataaagagaattagtgaagctttacaa |
841060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 15963195 - 15963293
Alignment:
Q |
52 |
gtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaatccacctttatactcgaaaggggattactgaagctttacaac |
150 |
Q |
|
|
|||||| ||||||||||||||||| ||| |||||||||| || | | ||||||||||||| |||||||| | ||| |||||| |||||| ||||||| |
|
|
T |
15963195 |
gtctacctgaccatataagttttggacagcctcttcagatttggagctaccacacaatccatctttataccctaaaaaggattagtgaagccttacaac |
15963293 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 11728478 - 11728544
Alignment:
Q |
100 |
accacacaatccacctttatactcgaaaggggattactgaagctttacaacaaattacacaattgtt |
166 |
Q |
|
|
||||||||||||||||||||| | |||| |||||| |||||||||||||| ||||||||||||| |
|
|
T |
11728478 |
accacacaatccacctttatatcctaaagaggattaatgaagctttacaactgtttacacaattgtt |
11728544 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 27223279 - 27223231
Alignment:
Q |
290 |
gtgaatatgaacttttcaaatacactataaaatatgtcccaaagatata |
338 |
Q |
|
|
|||||| ||||||||||||||||| | |||||||||| |||||||||| |
|
|
T |
27223279 |
gtgaatttgaacttttcaaatacattgtaaaatatgtgtcaaagatata |
27223231 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 33699789 - 33699962
Alignment:
Q |
10 |
tgagatagcctctcggattttgcacactttctcttctttt-tggtctacttgaccatataagttttgcacatcctcttcagactttaatcgaccacacaa |
108 |
Q |
|
|
||||||| |||||| |||| ||||||||||||||| |||| | ||||| ||| || || ||||| || ||||||||||||||| | | |||||| |
|
|
T |
33699789 |
tgagataccctctcagattctgcacactttctcttattttctagtctaaccaaccttacaaattttgggcagcctcttcagactttagctg-ctacacaa |
33699887 |
T |
 |
Q |
109 |
tccacctttatactcgaaaggggattactgaagctttacaacaaattacacaattgttattgtgattttgatctt |
183 |
Q |
|
|
||||||||||||| | |||| |||||| ||||||||||||| || || |||||||| ||||||| |||||||| |
|
|
T |
33699888 |
tccacctttataccctaaagaggattagtgaagctttacaattgatgactcaattgttcttgtgatcttgatctt |
33699962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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