View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0608_low_17 (Length: 320)
Name: NF0608_low_17
Description: NF0608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0608_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 15 - 286
Target Start/End: Original strand, 30575941 - 30576212
Alignment:
| Q |
15 |
gagcaatcgagtgaaaaatatacctgaaattcatataaatgttgagcaaaaacaactaccaattccaagagcagaaagttcaaccacattgtacattttt |
114 |
Q |
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| T |
30575941 |
gagcaatcgagtgaaaaatatacctgaaattcataaaaatgttgagcaaaaacaactaccaattccaagagcagaaagttcaaccgcattgtacattttt |
30576040 |
T |
|
| Q |
115 |
gatagagtcatatgaaaggaaaaactttcccaaccacgacatacagatctggtccgaatctgtgcttgccgagaatgaatgactttgttgtcgtagtggt |
214 |
Q |
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||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30576041 |
gatagagccatatgaaaggaaaaactttcccaactgcgacatacagatctggtccgaatctgtgcttgccgagaatgaatgactttgttgtcgtagtggt |
30576140 |
T |
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| Q |
215 |
tggtttcttccataatatcgacgggagataatacagaggaaggagaacaattatattgaagaaagaaccatt |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30576141 |
tggtttcttccataatatcgacgggagataatacagaggaaggagaacaattatattgaagaaagaaccatt |
30576212 |
T |
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