View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0608_low_28 (Length: 293)
Name: NF0608_low_28
Description: NF0608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0608_low_28 |
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Alignment Details
Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 20626038 - 20625936
Alignment:
| Q |
21 |
ttcaaactactaccatactgctcatttagcacgnnnnnnnat-taagtttcttcttaggatcgaaataaaaaatatatataaacattcgcatttttagaa |
119 |
Q |
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||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
20626038 |
ttcaaactactaccatactgctcatttagcacgtttttttaaataagtttcttcttaggatcgaaataaaaaatatatataaacattcgcattttcagaa |
20625939 |
T |
|
| Q |
120 |
ttg |
122 |
Q |
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||| |
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|
| T |
20625938 |
ttg |
20625936 |
T |
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