View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0608_low_3 (Length: 675)

Name: NF0608_low_3
Description: NF0608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0608_low_3
NF0608_low_3
[»] chr1 (41 HSPs)
chr1 (205-578)||(8401597-8401971)
chr1 (205-537)||(180024-180357)
chr1 (228-498)||(22348410-22348681)
chr1 (1-140)||(179808-179947)
chr1 (1-140)||(8402035-8402174)
chr1 (429-537)||(30802828-30802936)
chr1 (429-537)||(45890152-45890260)
chr1 (429-537)||(23319459-23319567)
chr1 (1-140)||(22348239-22348376)
chr1 (429-537)||(18057344-18057452)
chr1 (487-578)||(11422200-11422291)
chr1 (502-578)||(4097285-4097361)
chr1 (504-578)||(34370315-34370389)
chr1 (502-578)||(23174866-23174942)
chr1 (502-578)||(180365-180441)
chr1 (487-537)||(34370255-34370305)
chr1 (535-578)||(23174592-23174635)
chr1 (24-66)||(13463828-13463870)
chr1 (485-537)||(4097369-4097421)
chr1 (535-578)||(23174723-23174766)
chr1 (502-537)||(23319416-23319451)
chr1 (504-537)||(18057552-18057585)
chr1 (488-537)||(23174950-23174999)
chr1 (504-537)||(31084158-31084191)
chr1 (505-537)||(14229244-14229276)
chr1 (505-537)||(46590630-46590662)
chr1 (24-67)||(18597088-18597131)
chr1 (24-67)||(18750197-18750240)
chr1 (535-576)||(180526-180567)
chr1 (504-537)||(10498009-10498042)
chr1 (504-537)||(23319283-23319316)
chr1 (508-537)||(35197468-35197497)
chr1 (508-537)||(42134016-42134045)
chr1 (504-537)||(45890360-45890393)
chr1 (505-537)||(6708457-6708489)
chr1 (505-537)||(14389984-14390016)
chr1 (505-537)||(17811223-17811255)
chr1 (505-537)||(18928897-18928929)
chr1 (505-537)||(32143640-32143672)
chr1 (505-537)||(45849180-45849212)
chr1 (505-537)||(47693738-47693770)
[»] chr3 (33 HSPs)
chr3 (205-578)||(50754410-50754784)
chr3 (205-578)||(52986945-52987310)
chr3 (205-578)||(31852514-31852893)
chr3 (1-140)||(52987376-52987515)
chr3 (4-140)||(50754207-50754343)
chr3 (5-140)||(31852310-31852445)
chr3 (429-537)||(51361914-51362022)
chr3 (429-537)||(7044770-7044878)
chr3 (429-537)||(8718662-8718770)
chr3 (429-537)||(9070549-9070657)
chr3 (429-531)||(16276953-16277055)
chr3 (429-537)||(19384797-19384905)
chr3 (510-578)||(7044687-7044755)
chr3 (502-578)||(51361831-51361906)
chr3 (502-578)||(19384713-19384789)
chr3 (535-578)||(51361703-51361746)
chr3 (24-109)||(13603391-13603476)
chr3 (501-537)||(47728923-47728959)
chr3 (24-66)||(1005756-1005799)
chr3 (21-108)||(2216567-2216653)
chr3 (24-67)||(4444346-4444389)
chr3 (508-537)||(8718874-8718903)
chr3 (508-537)||(9070761-9070790)
chr3 (24-108)||(11262296-11262380)
chr3 (505-546)||(12974075-12974116)
chr3 (504-537)||(23756030-23756063)
chr3 (504-537)||(34562654-34562687)
chr3 (504-537)||(41191664-41191697)
chr3 (535-576)||(52986816-52986857)
chr3 (505-537)||(8036872-8036904)
chr3 (24-108)||(16289504-16289587)
chr3 (505-537)||(21175208-21175240)
chr3 (505-537)||(36185798-36185830)
[»] chr5 (35 HSPs)
chr5 (205-578)||(2826345-2826719)
chr5 (205-332)||(34329520-34329648)
chr5 (430-537)||(25016638-25016745)
chr5 (429-537)||(42512544-42512652)
chr5 (1-140)||(2826792-2826931)
chr5 (1-140)||(34329315-34329454)
chr5 (429-531)||(13363330-13363432)
chr5 (429-537)||(23335109-23335216)
chr5 (430-537)||(28069647-28069754)
chr5 (356-446)||(34329690-34329780)
chr5 (502-578)||(28069563-28069639)
chr5 (502-578)||(34329826-34329902)
chr5 (535-578)||(2826214-2826257)
chr5 (535-578)||(34330002-34330045)
chr5 (24-66)||(23568465-23568507)
chr5 (504-537)||(25016505-25016538)
chr5 (505-537)||(703802-703834)
chr5 (505-537)||(4951165-4951197)
chr5 (505-537)||(11376453-11376485)
chr5 (505-537)||(20134271-20134303)
chr5 (24-64)||(29189248-29189288)
chr5 (506-537)||(18464628-18464659)
chr5 (24-67)||(31549542-31549585)
chr5 (507-537)||(13363540-13363570)
chr5 (501-531)||(16552457-16552487)
chr5 (24-62)||(31411810-31411848)
chr5 (24-62)||(31422718-31422756)
chr5 (504-537)||(23334978-23335011)
chr5 (505-537)||(3340719-3340751)
chr5 (505-537)||(5630211-5630243)
chr5 (505-537)||(7286894-7286926)
chr5 (505-537)||(11660865-11660897)
chr5 (501-537)||(34329782-34329818)
chr5 (505-537)||(36864208-36864240)
chr5 (505-537)||(39861651-39861683)
[»] chr8 (44 HSPs)
chr8 (220-578)||(39657888-39658245)
chr8 (205-578)||(4835985-4836359)
chr8 (205-578)||(4841430-4841804)
chr8 (205-537)||(7058510-7058843)
chr8 (205-537)||(2750427-2750760)
chr8 (205-363)||(8550903-8551062)
chr8 (1-140)||(4836427-4836566)
chr8 (1-140)||(4841872-4842011)
chr8 (24-140)||(2750248-2750364)
chr8 (1-140)||(39658269-39658408)
chr8 (205-350)||(1209110-1209259)
chr8 (429-537)||(7614500-7614608)
chr8 (429-537)||(39022525-39022633)
chr8 (356-449)||(1209352-1209445)
chr8 (1-140)||(8550704-8550837)
chr8 (1-140)||(1208899-1209039)
chr8 (45-140)||(7058348-7058442)
chr8 (500-575)||(1209443-1209518)
chr8 (504-578)||(8551103-8551177)
chr8 (429-530)||(15260266-15260367)
chr8 (502-578)||(7058851-7058927)
chr8 (502-578)||(2750768-2750844)
chr8 (24-68)||(4838725-4838769)
chr8 (429-473)||(32986924-32986968)
chr8 (24-66)||(36577978-36578020)
chr8 (535-578)||(2751065-2751108)
chr8 (24-62)||(26872669-26872707)
chr8 (24-62)||(26875127-26875165)
chr8 (535-575)||(1209609-1209649)
chr8 (505-537)||(23504565-23504597)
chr8 (535-578)||(2750889-2750932)
chr8 (535-578)||(2750977-2751020)
chr8 (24-67)||(23091553-23091596)
chr8 (504-537)||(23397199-23397232)
chr8 (535-575)||(4835857-4835897)
chr8 (535-575)||(4841302-4841342)
chr8 (505-537)||(15809780-15809812)
chr8 (505-537)||(23567583-23567615)
chr8 (505-537)||(24472953-24472985)
chr8 (505-537)||(27506778-27506810)
chr8 (505-537)||(34343391-34343423)
chr8 (505-537)||(35448550-35448582)
chr8 (504-532)||(39022733-39022761)
chr8 (505-537)||(45409478-45409510)
[»] chr7 (38 HSPs)
chr7 (205-537)||(15974265-15974598)
chr7 (205-351)||(48305629-48305776)
chr7 (205-329)||(48691388-48691513)
chr7 (5-140)||(15974663-15974797)
chr7 (1-140)||(48305428-48305565)
chr7 (429-537)||(30430266-30430374)
chr7 (356-449)||(48305867-48305960)
chr7 (1-140)||(48691184-48691323)
chr7 (429-537)||(33798359-33798467)
chr7 (429-537)||(46024586-46024693)
chr7 (429-530)||(46572980-46573080)
chr7 (359-449)||(48691561-48691651)
chr7 (502-578)||(15974181-15974257)
chr7 (502-576)||(46572891-46572965)
chr7 (508-578)||(48691700-48691770)
chr7 (502-578)||(48306003-48306079)
chr7 (1-73)||(28396914-28396986)
chr7 (535-578)||(46572764-46572807)
chr7 (535-578)||(15974050-15974093)
chr7 (24-67)||(559892-559935)
chr7 (24-67)||(569801-569844)
chr7 (24-67)||(4185175-4185218)
chr7 (24-66)||(5200608-5200651)
chr7 (24-66)||(5209737-5209780)
chr7 (24-67)||(17515799-17515842)
chr7 (24-67)||(17537372-17537415)
chr7 (24-66)||(27967395-27967438)
chr7 (24-66)||(27976848-27976891)
chr7 (502-537)||(33798475-33798510)
chr7 (535-578)||(48691861-48691904)
chr7 (24-58)||(38411786-38411820)
chr7 (504-537)||(24360521-24360554)
chr7 (504-537)||(32091287-32091320)
chr7 (504-537)||(46024793-46024826)
chr7 (500-537)||(48305958-48305995)
chr7 (506-538)||(5758055-5758087)
chr7 (505-537)||(6620738-6620770)
chr7 (505-537)||(44426739-44426771)
[»] chr6 (26 HSPs)
chr6 (205-578)||(877606-877975)
chr6 (205-578)||(33345651-33346031)
chr6 (356-578)||(24736891-24737112)
chr6 (205-363)||(24737192-24737351)
chr6 (2-138)||(877404-877540)
chr6 (1-140)||(24737416-24737558)
chr6 (1-140)||(33346098-33346236)
chr6 (24-108)||(3042352-3042435)
chr6 (535-578)||(878063-878106)
chr6 (25-61)||(5995689-5995725)
chr6 (505-537)||(14237850-14237882)
chr6 (24-108)||(20215976-20216059)
chr6 (24-108)||(22109997-22110080)
chr6 (24-108)||(24919128-24919211)
chr6 (539-578)||(878210-878249)
chr6 (24-67)||(24296438-24296481)
chr6 (24-67)||(24310469-24310512)
chr6 (535-578)||(24736760-24736803)
chr6 (24-67)||(27048684-27048727)
chr6 (24-67)||(27058928-27058971)
chr6 (24-66)||(30996958-30997001)
chr6 (504-537)||(18611920-18611953)
chr6 (504-537)||(30909346-30909379)
chr6 (25-57)||(5488176-5488208)
chr6 (505-537)||(25119178-25119210)
chr6 (501-537)||(27079774-27079810)
[»] chr4 (47 HSPs)
chr4 (356-578)||(638495-638717)
chr4 (205-363)||(638256-638415)
chr4 (205-350)||(26446927-26447073)
chr4 (1-140)||(26447138-26447277)
chr4 (429-578)||(45256465-45256614)
chr4 (1-140)||(638052-638190)
chr4 (429-537)||(18923812-18923920)
chr4 (485-578)||(26577579-26577672)
chr4 (429-537)||(4168911-4169019)
chr4 (429-537)||(51836592-51836700)
chr4 (429-537)||(22180649-22180755)
chr4 (436-537)||(27764805-27764906)
chr4 (429-531)||(36621232-36621334)
chr4 (429-537)||(21097668-21097776)
chr4 (502-569)||(10473159-10473226)
chr4 (502-577)||(26446800-26446875)
chr4 (515-578)||(51836510-51836573)
chr4 (502-575)||(38245558-38245631)
chr4 (24-68)||(52296728-52296772)
chr4 (535-578)||(10473459-10473502)
chr4 (24-62)||(12997531-12997569)
chr4 (504-537)||(27765022-27765055)
chr4 (24-67)||(4749054-4749098)
chr4 (505-537)||(8157182-8157214)
chr4 (24-64)||(32215923-32215963)
chr4 (505-537)||(52325243-52325275)
chr4 (502-537)||(4169027-4169062)
chr4 (535-578)||(10473328-10473371)
chr4 (539-578)||(38245738-38245777)
chr4 (504-538)||(1728875-1728909)
chr4 (487-537)||(10473101-10473151)
chr4 (535-577)||(45256699-45256741)
chr4 (504-537)||(18924020-18924053)
chr4 (504-537)||(20862305-20862338)
chr4 (504-537)||(38010649-38010682)
chr4 (505-537)||(2124416-2124448)
chr4 (505-537)||(9813017-9813049)
chr4 (505-537)||(10374184-10374216)
chr4 (505-537)||(16474894-16474926)
chr4 (24-108)||(17141823-17141906)
chr4 (503-531)||(38245516-38245544)
chr4 (505-537)||(38563877-38563909)
chr4 (505-533)||(41025138-41025166)
chr4 (505-537)||(47568025-47568057)
chr4 (505-537)||(51076969-51077001)
chr4 (505-537)||(53526392-53526424)
chr4 (505-537)||(54895523-54895555)
[»] chr2 (39 HSPs)
chr2 (205-363)||(25193297-25193456)
chr2 (205-332)||(4579360-4579488)
chr2 (1-140)||(4579552-4579691)
chr2 (475-578)||(14550755-14550858)
chr2 (429-537)||(20710318-20710426)
chr2 (429-537)||(18297580-18297688)
chr2 (359-446)||(4579228-4579315)
chr2 (1-140)||(25193092-25193230)
chr2 (485-578)||(2264153-2264246)
chr2 (502-578)||(25193495-25193571)
chr2 (501-578)||(4579149-4579226)
chr2 (502-578)||(18297496-18297572)
chr2 (17-66)||(22186082-22186131)
chr2 (535-578)||(2264465-2264508)
chr2 (28-107)||(17686391-17686470)
chr2 (536-578)||(4579009-4579051)
chr2 (24-62)||(20622454-20622492)
chr2 (27-108)||(28479887-28479967)
chr2 (24-67)||(33308194-33308238)
chr2 (535-578)||(14550612-14550655)
chr2 (535-578)||(18297365-18297408)
chr2 (24-67)||(21851547-21851590)
chr2 (24-67)||(21859982-21860025)
chr2 (24-66)||(25262584-25262627)
chr2 (24-67)||(27425297-27425340)
chr2 (24-67)||(27440343-27440386)
chr2 (24-67)||(39756289-39756332)
chr2 (536-578)||(4578749-4578791)
chr2 (536-578)||(4578879-4578921)
chr2 (504-537)||(4281088-4281121)
chr2 (24-57)||(34543055-34543088)
chr2 (504-537)||(41345342-41345375)
chr2 (505-537)||(1095251-1095283)
chr2 (505-537)||(12449126-12449158)
chr2 (24-56)||(21322012-21322044)
chr2 (505-537)||(22596376-22596408)
chr2 (505-537)||(25575395-25575427)
chr2 (505-537)||(30777419-30777451)
chr2 (505-537)||(42364633-42364665)
[»] scaffold0238 (3 HSPs)
scaffold0238 (429-530)||(24727-24828)
scaffold0238 (535-576)||(24518-24559)
scaffold0238 (534-578)||(24659-24703)
[»] scaffold0194 (1 HSPs)
scaffold0194 (429-537)||(28157-28265)
[»] scaffold0097 (1 HSPs)
scaffold0097 (429-537)||(14157-14265)
[»] scaffold0009 (1 HSPs)
scaffold0009 (441-537)||(203357-203453)
[»] scaffold0338 (3 HSPs)
scaffold0338 (502-578)||(6171-6247)
scaffold0338 (535-578)||(6335-6378)
scaffold0338 (500-537)||(6126-6163)
[»] scaffold1120 (1 HSPs)
scaffold1120 (24-103)||(351-430)
[»] scaffold0206 (1 HSPs)
scaffold0206 (24-108)||(19467-19550)
[»] scaffold0004 (1 HSPs)
scaffold0004 (505-537)||(96139-96171)
[»] scaffold1896 (1 HSPs)
scaffold1896 (24-62)||(437-475)
[»] scaffold0669 (1 HSPs)
scaffold0669 (24-64)||(6040-6080)
[»] scaffold0609 (1 HSPs)
scaffold0609 (24-108)||(2512-2595)
[»] scaffold0249 (1 HSPs)
scaffold0249 (505-537)||(23616-23648)
[»] scaffold0129 (1 HSPs)
scaffold0129 (505-537)||(19992-20024)
[»] scaffold0027 (1 HSPs)
scaffold0027 (24-108)||(64680-64763)


Alignment Details
Target: chr1 (Bit Score: 319; Significance: 1e-180; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 205 - 578
Target Start/End: Complemental strand, 8401971 - 8401597
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8401971 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttcttcgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 8401872  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  8401871 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagacgatgtttatgtga 8401772  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  8401771 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttatgatgttaaagggatttatggctgggaaa 8401672  T
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  8401671 ctgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 8401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 205 - 537
Target Start/End: Original strand, 180024 - 180357
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||    
T  180024 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggaatttttgttatgttgaagtgttgttccgatccggttcg 180123  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  180124 aatcttgttgtggtaggctgtacaaactctccctctacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 180223  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  180224 ttttctgtggtttagtgttcatgaggttcacagtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaa 180323  T
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||| ||||||||||||||||||||||| ||||    
T  180324 ctgctagaaaccattaagtacatctaatggtttt 180357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 228 - 498
Target Start/End: Original strand, 22348410 - 22348681
Alignment:
Q  228 cgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcgaattttgttgtggtaggctgtac 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||     
T  22348410 cgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttatgttgaagtgttgttccgatccggttcgaatcttgttgtagtaggctgtat 22348509  T
Q  327 gaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatg 426  Q
     ||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22348510 aaactctccctctacctcttctaaatcgattctggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttaatgttcatg 22348609  T
Q  427 aggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctg 498  Q
    || ||||||||||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||    
T  22348610 agtttcacggtttcagatctgaagttcttactggattcgaaatctttgtgatattagagggatttatggctg 22348681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 179808 - 179947
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||  || ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  179808 cggccacacatgatgatttcggcgcgatggccggtggtggcaccaccgcgccggagttcaaaactccatccaaatcaaaaagttttcacggttttagaca 179907  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||| ||||||| | |||||||||||    
T  179908 tccttttttgtgttgatttcaaatatcgtcttagatttct 179947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 8402174 - 8402035
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    |||||| |||||||||||| || |||||||||||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||||||||||||| ||    
T  8402174 cggccaaacatgatgattccggcgcggtggccggtggtggcaccaccacaccggagttcaaaacttcatccaaatcaaaaagttttcacggttttaggca 8402075  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8402074 tccttttttgtgttgattccaaatattgccttagatttct 8402035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 30802828 - 30802936
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30802828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaaagggatttatggctgggaaactgctggaaaccattaagtacatct 30802927  T
Q  529 aatgatttt 537  Q
    |||||||||    
T  30802928 aatgatttt 30802936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 45890152 - 45890260
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45890152 gttcacgatttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatcgctgggaaactgctggaaaccattaagtacatct 45890251  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  45890252 aatggtttt 45890260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 23319567 - 23319459
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  23319567 gttcatggtttcagatctgaagttgttactggattcgaaatctttgtgatgttttagggatttatggctgggaaactgctggaaaccattaagtacatct 23319468  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  23319467 aatggtttt 23319459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22348239 - 22348376
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    |||||||||||||||||||    |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22348239 cggccacacatgatgattccaccgcggtggccggtggtggcaccactgcgtcggagttcaaaactccgtccaaatcaaaatgttttcacggttttagaca 22348338  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||   ||||||||  ||||||||||| |||||||||||||    
T  22348339 tc--attttgtgtcaattccaaatatcgccttagatttct 22348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 18057344 - 18057452
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  18057344 gttcacggtttcagatctgaagttgttactggattcgaaatctctgcgatgttagagggatttatggctagaaaactgttggaaaccattaagtacatct 18057443  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  18057444 aatggtttt 18057452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 487 - 578
Target Start/End: Original strand, 11422200 - 11422291
Alignment:
Q  487 gatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||| |||||||||    
T  11422200 gatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccgatacagtgatgatg 11422291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 4097361 - 4097285
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4097361 aactgctggaaaccattaagtacatctaatgattttccacaacaaaattgttttggcattccggtacggtgatgatg 4097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 504 - 578
Target Start/End: Original strand, 34370315 - 34370389
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  34370315 ctgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 34370389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 23174942 - 23174866
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  23174942 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcatttcggtacggtgatgatg 23174866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 180365 - 180441
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||    
T  180365 aactgctgaaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacagtgatgatg 180441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 537
Target Start/End: Original strand, 34370255 - 34370305
Alignment:
Q  487 gatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  34370255 gatttatggctgggaaactgctggaaactattaagtacatctaatggtttt 34370305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 23174635 - 23174592
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  23174635 tttccacaacaaaatggttttggcattccggtacggtgatgatg 23174592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 13463870 - 13463828
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  13463870 gcggtggccggtggtggcaccaccgcgccggagttcaaaactc 13463828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 537
Target Start/End: Complemental strand, 4097421 - 4097369
Alignment:
Q  485 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||| ||||    
T  4097421 gggatttatggctgggaaattgatggaaactattaagtacatctaatggtttt 4097369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 23174766 - 23174723
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  23174766 tttccacaacaaaatggttttggcattccgatacggtgatgatg 23174723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 537
Target Start/End: Complemental strand, 23319451 - 23319416
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||||||    
T  23319451 aactgctggaaaccattaagtacatctaatgatttt 23319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 18057552 - 18057585
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||||    
T  18057552 ctgctggaaaccattaagtacatctaatgatttt 18057585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 537
Target Start/End: Complemental strand, 23174999 - 23174950
Alignment:
Q  488 atttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||| ||||    
T  23174999 atttatggctgcgaaattgctggaaaccattaagtatatctaatggtttt 23174950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 31084158 - 31084191
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||||    
T  31084158 ctgctggaaaccattaagtacatctaatgatttt 31084191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 14229276 - 14229244
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  14229276 tgctggaaaccattaagtacatctaatgatttt 14229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 46590662 - 46590630
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  46590662 tgctggaaaccattaagtacatctaatgatttt 46590630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 18597131 - 18597088
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  18597131 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 18597088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 18750240 - 18750197
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  18750240 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 18750197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 576
Target Start/End: Original strand, 180526 - 180567
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatga 576  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  180526 tttccacagaaaaatggttttggcattccggtacggtgatga 180567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 10498009 - 10498042
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||| ||||||||||||||||||||||||||||    
T  10498009 ctgctagaaaccattaagtacatctaatgatttt 10498042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 23319316 - 23319283
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  23319316 ctgctggaaaccattaagtacatctaatggtttt 23319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 537
Target Start/End: Complemental strand, 35197497 - 35197468
Alignment:
Q  508 tggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||    
T  35197497 tggaaaccattaagtacatctaatgatttt 35197468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 537
Target Start/End: Complemental strand, 42134045 - 42134016
Alignment:
Q  508 tggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||    
T  42134045 tggaaaccattaagtacatctaatgatttt 42134016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 45890360 - 45890393
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    |||| |||||||||||||||||||||||||||||    
T  45890360 ctgccggaaaccattaagtacatctaatgatttt 45890393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 6708457 - 6708489
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||| |||||    
T  6708457 tgctggaaaccattaagtacatctaattatttt 6708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 14389984 - 14390016
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  14389984 tgctggaaaccattaagtacatctaatggtttt 14390016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 17811223 - 17811255
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  17811223 tgctggaaaccattaagtacatctaatggtttt 17811255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 18928897 - 18928929
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  18928897 tgctggaaaccattaagtacatctaatggtttt 18928929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 32143672 - 32143640
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||| ||||||||||||||||||||||||||||    
T  32143672 tgctagaaaccattaagtacatctaatgatttt 32143640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 45849212 - 45849180
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  45849212 tgctggaaaccattaagtacatctaatggtttt 45849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 47693770 - 47693738
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  47693770 tgctggaaaccattaagtacatctaatggtttt 47693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 205 - 578
Target Start/End: Original strand, 50754410 - 50754784
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  50754410 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttca 50754509  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| | |||||||||||||||| ||||||| |||| |||||||||||||    
T  50754510 aatcttgttgtggtaggctgtacaaactctccctctacctcttctaaaccgattctagatttattgatgaattcgagagtgatagaggatgtttatgtga 50754609  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  50754610 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttatagggatttatggctgggaaa 50754709  T
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  50754710 ctgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 50754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 205 - 578
Target Start/End: Complemental strand, 52987310 - 52986945
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  52987310 ctacctcttgttcttcacggatctgtttcgcgttttggtcttcttctcggatccggttcggatttgttgttgtgttcaagtgttgttccgatccggttcg 52987211  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||||||  | ||||||||||||||||||||||||||||||||    
T  52987210 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggatttataaacgaatttgagagtggtagatgatgtttatgtga 52987111  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    |||||||||||||||||         ||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  52987110 ttttctgtggtttagtg---------ttcacggtttcagatctgaagttgttattggattcgaaatctttgcgatgttagagggatttatggctgggaaa 52987020  T
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    || |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  52987019 ctactggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 52986945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 205 - 578
Target Start/End: Original strand, 31852514 - 31852893
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||     
T  31852514 ctacctcttgttcttcacagatccgtttcgcgttttggtcttcttctccgatccggttcagatttgt-gttgtgttgaagtgttgtttcgatccggttca 31852612  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggattt------------attgatgaatttgagagtggtagatg 391  Q
    ||| ||||||| ||     ||  ||||||||||||||||||||||||  ||||| ||||| |            ||||||||||| ||||| ||||||||    
T  31852613 aatcttgttgttgt-----gtt-gaactctccctctacctcttctaaaccgattctggatattcttctggatctattgatgaattcgagaggggtagatg 31852706  T
Q  392 atgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggattt 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  31852707 atgtttatgtgattttctgtggtttagtgttcatgaggttcacggttttagatctgaagttgttattggaatcaaaatctttgtgatgttagagggattt 31852806  T
Q  492 atggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  31852807 atggctgggaaactgttggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 31852893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 52987515 - 52987376
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  52987515 cggccacacatgatgattccggcgcggtggtcggtggtggcaccaccgcgccggagttcaaaactgcatccaaatcaaaaagtttttacggttttagaca 52987416  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  52987415 tccttttttgtgttgattccaaatattgccttagatttct 52987376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 50754207 - 50754343
Alignment:
Q  4 ccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcc 103  Q
    |||||||||||||||| || || ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50754207 ccacacatgatgattccggcgcagtggccggtggtgacaccaccgcaccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcc 50754306  T
Q  104 ttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||||||||||||||||||||||| |||||||||||||    
T  50754307 ttttttgtgttgattccaaatatcgccttagatttct 50754343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 31852310 - 31852445
Alignment:
Q  5 cacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 104  Q
    ||||||||| ||||  || |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31852310 cacacatgacgatttcggcgcggtggccggtggtggcaccactgcgctggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 31852409  T
Q  105 tttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||||||| | |||||||||||    
T  31852410 tttttgtgttgattccaaatatcgtcttagatttct 31852445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 51362022 - 51361914
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51362022 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctggaaaactgctggaaaccattaagtacatct 51361923  T
Q  529 aatgatttt 537  Q
    |||||||||    
T  51361922 aatgatttt 51361914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 7044878 - 7044770
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7044878 gttcacggtttcagatctgaagttgttactggattcgaaatctttgttatgttagagggatttatggcagggaaactgctggaaaccattaagtacatct 7044779  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  7044778 aatggtttt 7044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 8718662 - 8718770
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8718662 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 8718761  T
Q  529 aatgatttt 537  Q
    ||| |||||    
T  8718762 aataatttt 8718770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 9070549 - 9070657
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9070549 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 9070648  T
Q  529 aatgatttt 537  Q
    ||| |||||    
T  9070649 aataatttt 9070657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 429 - 531
Target Start/End: Complemental strand, 16277055 - 16276953
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16277055 gttcacggttttagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggccgggaaactgctggaaaccattaagtacatct 16276956  T
Q  529 aat 531  Q
    |||    
T  16276955 aat 16276953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 19384905 - 19384797
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  19384905 gttcacagtttaagatctgaagttgttactagattcaaaatctttgtgatgttagaggaatttatggttgggaaactgctggaaaccattaagtatatct 19384806  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  19384805 aatggtttt 19384797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 510 - 578
Target Start/End: Complemental strand, 7044755 - 7044687
Alignment:
Q  510 gaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||    
T  7044755 gaaaccattaagtacatctaatggttttccatagcaaaatggttttggcattccggtacggtgatgatg 7044687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 51361906 - 51361831
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||    
T  51361906 aactgttggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtac-gtgatgatg 51361831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 19384789 - 19384713
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||| || ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  19384789 aactgttgaaaatcattaagtacatctaatggttttacacaataaaatggttttggcattccggtacggtgatgatg 19384713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 51361746 - 51361703
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  51361746 tttccacaacaaaatggttttggcattccggtacggtgatgatg 51361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 13603391 - 13603476
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 109  Q
    |||||||||| ||||||||| |||||||||||| ||  |||||||| |||||||||||| | || ||| ||||| ||||||||||||    
T  13603391 gcggtggccgatggtggcaccaccgcgccggagttttcaaactccg-ccaaatcaaaaattatttacgtttttaaacatcctttttt 13603476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 537
Target Start/End: Original strand, 47728923 - 47728959
Alignment:
Q  501 aaactgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47728923 aaactgctggaaaccattaagtacatctaatggtttt 47728959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 1005756 - 1005799
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 66  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  1005756 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 1005799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 2216567 - 2216653
Alignment:
Q  21 ggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||||||||||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| |   ||||| |||||||||||    
T  2216567 ggtgcggtggccggtggtggcgccaccgcgccggagtttcaaactcc-tccgattcaaaaactttttatatttttaaacatccttttt 2216653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 4444389 - 4444346
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  4444389 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 4444346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 537
Target Start/End: Original strand, 8718874 - 8718903
Alignment:
Q  508 tggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||    
T  8718874 tggaaaccattaagtacatctaatgatttt 8718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 537
Target Start/End: Original strand, 9070761 - 9070790
Alignment:
Q  508 tggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||    
T  9070761 tggaaaccattaagtacatctaatgatttt 9070790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 11262296 - 11262380
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgcc-ggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    |||||||||||||||||| | |||||||| ||||||  ||||||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  11262296 gcggtggccggtggtggcgccaccgcgccgggagttttaaactcc-tccgattcaaaaactttttacgtttttaaacatccttttt 11262380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 546
Target Start/End: Complemental strand, 12974116 - 12974075
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgattttccacaacaa 546  Q
    ||||||||||||||||||||||| ||||||||| || |||||    
T  12974116 tgctggaaaccattaagtacatcgaatgattttgcagaacaa 12974075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 23756030 - 23756063
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  23756030 ctgctggaaaccattaagtacatctaatggtttt 23756063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 34562687 - 34562654
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  34562687 ctgctggaaaccattaagtacatctaatggtttt 34562654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 41191697 - 41191664
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||| |||||||||||||||||    
T  41191697 ctgctggaaaccattatgtacatctaatgatttt 41191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 576
Target Start/End: Complemental strand, 52986857 - 52986816
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatga 576  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  52986857 tttccacagtaaaatggttttggcattccggtacggtgatga 52986816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 8036904 - 8036872
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  8036904 tgctggaaaccattaagtacatctaatggtttt 8036872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 16289587 - 16289504
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    |||||||||||||||||| | ||||||||||||||  ||| ||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  16289587 gcggtggccggtggtggcgccaccgcgccggagttttaaagtcc-tccgattcaaaaactttttacatttttaaacatccttttt 16289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 21175208 - 21175240
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  21175208 tgctggaaaccattaagtacatctaatggtttt 21175240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 36185830 - 36185798
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  36185830 tgctggaaaccattaagtacatctaatggtttt 36185798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 205 - 578
Target Start/End: Complemental strand, 2826719 - 2826345
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2826719 ctacctcttgttcttcacggacccatttcacgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 2826620  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| |||| |||||||| |||||||||||||||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2826619 aatcttgtcgtggtaggttgtacgaactctccctctacctcttctaaactgattatggatttattgacgaattcgagagtggtagatgatgtttatgtga 2826520  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2826519 ttttctatggtttagtgttcatgaggttcacggttttagatctgaagttgttactggattcaaaatctttgtgatgttagagggatttatggctgggaaa 2826420  T
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||| ||||||||||||||||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||||    
T  2826419 ctgttggaaaccattaagtacatctaatcgttttccacagcaaaatggttttggcattccggtacggtgatgatg 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 34329520 - 34329648
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34329520 ctacatcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttcg 34329619  T
Q  304 aattttgttgtggtaggctgtacgaactc 332  Q
    ||| ||||||||||||| |||||||||||    
T  34329620 aatcttgttgtggtaggttgtacgaactc 34329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 430 - 537
Target Start/End: Complemental strand, 25016745 - 25016638
Alignment:
Q  430 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatcta 529  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25016745 ttcacagtttcagatctgaagttgttactggattcgaaatctttgtgatgttagaggaatttatggctgggaaactgctggaaaccattaagtacatcta 25016646  T
Q  530 atgatttt 537  Q
    ||||||||    
T  25016645 atgatttt 25016638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 42512544 - 42512652
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42512544 gttcacggtttcatatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctcgaaaccattaagtacatct 42512643  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  42512644 aatggtttt 42512652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 2826931 - 2826792
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    |||||| |||||||||||| |  || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    | |||||||||||||    
T  2826931 cggccatacatgatgattccgacgcagtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaaaaaattacggttttagaca 2826832  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  2826831 tccttttttgtgttgatttcaaatatcgccttagatttct 2826792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34329315 - 34329454
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||  ||  ||| |||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  34329315 cggccacacatgatgatttcggcacggcggccgccggtggtaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggtttcaaaca 34329414  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  34329415 tccttttttgtgttgattccaaatatcgtcttagatttct 34329454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 429 - 531
Target Start/End: Original strand, 13363330 - 13363432
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13363330 gttcacggtttcagatctgaagttgttattggattcgaaatctttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 13363429  T
Q  529 aat 531  Q
    |||    
T  13363430 aat 13363432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 23335216 - 23335109
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23335216 gttcacggtttcagatctgaagttgaaactggattcaaaatctttgtgatgttagagggatttatggctgggaaac-gctggaaaccattaagtacatct 23335118  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  23335117 aatggtttt 23335109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 430 - 537
Target Start/End: Complemental strand, 28069754 - 28069647
Alignment:
Q  430 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatcta 529  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  28069754 ttcacggtttcagatctgaagttgttactggattcgaaatcttttttatgttagagggatttatggatgggaaactgctggaaactattaagtacatcta 28069655  T
Q  530 atgatttt 537  Q
    ||| ||||    
T  28069654 atggtttt 28069647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 356 - 446
Target Start/End: Original strand, 34329690 - 34329780
Alignment:
Q  356 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  34329690 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcattcggttcacggtttcagatct 34329780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 28069639 - 28069563
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||    
T  28069639 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccagtacggtgatgatg 28069563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 34329826 - 34329902
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||| |||||||||||||||    
T  34329826 aactgctggaaaccattaagtacatctaatggttttccaaagcaaaatggttttggcattctggtacggtgatgatg 34329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 2826257 - 2826214
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  2826257 tttccacagcaaaatggttttggcattccggtacggtgatgatg 2826214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 34330002 - 34330045
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  34330002 tttccacagcaaaatggttttggcattccggtacggtgatgatg 34330045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 23568507 - 23568465
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 66  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  23568507 gcggtggccggtggtggcatcaccgcgccggagttcaaaactc 23568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 25016538 - 25016505
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||||    
T  25016538 ctgctggaaaccattaagtacatctaatgatttt 25016505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 703834 - 703802
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  703834 tgctggaaaccattaagtacatctaatgatttt 703802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 4951165 - 4951197
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  4951165 tgctggaaaccattaagtacatctaatgatttt 4951197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 11376485 - 11376453
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  11376485 tgctggaaaccattaagtacatctaatgatttt 11376453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 20134303 - 20134271
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  20134303 tgctggaaaccattaagtacatctaatgatttt 20134271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 29189288 - 29189248
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 64  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  29189288 gcggtggccggtggtggcaccaccgcgcctgagttcaaaac 29189248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 537
Target Start/End: Complemental strand, 18464659 - 18464628
Alignment:
Q  506 gctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||    
T  18464659 gctggaaaccattaagtacatctaatgatttt 18464628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 31549542 - 31549585
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  31549542 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 31549585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 507 - 537
Target Start/End: Original strand, 13363540 - 13363570
Alignment:
Q  507 ctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||    
T  13363540 ctggaaaccattaagtacatctaatgatttt 13363570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 531
Target Start/End: Complemental strand, 16552487 - 16552457
Alignment:
Q  501 aaactgctggaaaccattaagtacatctaat 531  Q
    |||||||||||||||||||||||||||||||    
T  16552487 aaactgctggaaaccattaagtacatctaat 16552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 31411848 - 31411810
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaa 62  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  31411848 gcggtggccggtggtggcaccaccgcaccggagttcaaa 31411810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 31422756 - 31422718
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaa 62  Q
    |||||||||||||||||||| || |||||||||||||||    
T  31422756 gcggtggccggtggtggcaccactgcgccggagttcaaa 31422718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 23335011 - 23334978
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  23335011 ctgctggaaaccattaagtacatctaatggtttt 23334978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 3340719 - 3340751
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  3340719 tgctggaaaccattaagtacatctaatggtttt 3340751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 5630211 - 5630243
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  5630211 tgctggaaaccattaagtacatctaatggtttt 5630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 7286894 - 7286926
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  7286894 tgctggaaaccattaagtacatctaatggtttt 7286926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 11660897 - 11660865
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  11660897 tgctggaaaccattaagtacatctaatggtttt 11660865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 537
Target Start/End: Original strand, 34329782 - 34329818
Alignment:
Q  501 aaactgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  34329782 aaactgttggaaaccattaagtacatctaatggtttt 34329818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 36864208 - 36864240
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||| |||||||||||||    
T  36864208 tgctggaaaccattaagtatatctaatgatttt 36864240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 39861683 - 39861651
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  39861683 tgctggaaaccattaagtacatctaatggtttt 39861651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 220 - 578
Target Start/End: Complemental strand, 39658245 - 39657888
Alignment:
Q  220 cacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcgaattttgttgtggta 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  39658245 cacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcgaatcttgttgtggta 39658146  T
Q  319 ggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttag 418  Q
    |||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39658145 ggctgtacaaactctccctctacctcttctaaa-cgattatgaatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttag 39658047  T
Q  419 tgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccatt 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  39658046 tgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgcttgaaaccatt 39657947  T
Q  519 aagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||||||||| ||||||||| ||||||  |||| ||||||||||||||||||||||    
T  39657946 aagtacatctaatggttttccacagcaaaat-tttttggcattccggtacggtgatgatg 39657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 205 - 578
Target Start/End: Complemental strand, 4836359 - 4835985
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4836359 ctacctcttgttcttcacggattcgtttcgtgttttggtcttcttctccgatctggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 4836260  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||||||||||||||||||||   ||||||||||||  ||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  4836259 aatcttgttgtggtaggctgtacgaactctccgcgtacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 4836160  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  4836159 ttttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatctttgtgatattagagggatttatggctgggaaa 4836060  T
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  4836059 ctgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 4835985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 205 - 578
Target Start/End: Complemental strand, 4841804 - 4841430
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4841804 ctacctcttgttcttcacggattcgtttcgtgttttggtcttcttctccgatctggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 4841705  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||||||||||||||||||||   ||||||||||||  ||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  4841704 aatcttgttgtggtaggctgtacgaactctccgcgtacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 4841605  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  4841604 ttttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatctttgtgatattagagggatttatggctgggaaa 4841505  T
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  4841504 ctgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 4841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 205 - 537
Target Start/End: Original strand, 7058510 - 7058843
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatcgg-ttcg 303  Q
    ||||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || |    
T  7058510 ctacctcttgttcttcacgaattcgtttcgtgttttggttttcttctccgatccggttcggatttgttgttgtgttgaaatgttgttccgatccgatttg 7058609  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  7058610 aatcttgttgtggtatgctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagatgatgtttatgtga 7058709  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||    
T  7058710 ttttatgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggttgggaaa 7058809  T
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  7058810 ctgctggaaaccattaagtacatctaatggtttt 7058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 205 - 537
Target Start/End: Original strand, 2750427 - 2750760
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2750427 ctacctcctgttcttcacagatccgtttcacattttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 2750526  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||||| |||| ||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  2750527 aatcttgttgtggtaggttgtatgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtgatagatgatgtttatgtga 2750626  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||| |||    
T  2750627 ttttatgtggtttagtgtttatgatgttcacggtttcagatctgaagtttttacttgattcgaaatctttgtgatgttagagggatttatggctggaaaa 2750726  T
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  2750727 ctgctggaaaccattaagtacatctaatggtttt 2750760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 205 - 363
Target Start/End: Original strand, 8550903 - 8551062
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 303  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8550903 ctacctcttgttcttcacggatctgtttcgcgttttggtcttcttctccgatccggttcagatttgttgttgtgttgaagtgttgttccgatccggttcg 8551002  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 363  Q
    ||| ||||||||||||| ||||||||||||||||||||||||| |||  ||||| |||||    
T  8551003 aatcttgttgtggtaggttgtacgaactctccctctacctcttataaaccgattctggat 8551062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4836566 - 4836427
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4836566 cggccacacatgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 4836467  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4836466 tccttttttgcgttgattccaaatattgccttaaatttct 4836427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4842011 - 4841872
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4842011 cggccacacatgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 4841912  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4841911 tccttttttgcgttgattccaaatattgccttaaatttct 4841872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 2750248 - 2750364
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaa 123  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2750248 gcggtggccggtggtggaaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcatggttttagacatccttttttgtgttgattccaaa 2750347  T
Q  124 tattgccttagatttct 140  Q
    ||| |||||||||||||    
T  2750348 tatcgccttagatttct 2750364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 39658408 - 39658269
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| ||  ||| |||||  |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39658408 cggccacacatgatgattccggcacggcggccgccggtgtcaccaccgcgccggagttcaaaactccgtccgaatcaaaaagttttcacggttttagaca 39658309  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  39658308 tccttttttgtgttgattccaaatatcgccttagatttct 39658269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 205 - 350
Target Start/End: Original strand, 1209110 - 1209259
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggat---ttgttgttgtgttgaagtgttgttccgat-cggt 300  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||   |||||||||||||||| |||||||||||| ||||    
T  1209110 ctacctcttgttcttcatggatccgtttcgcgttttggtcttcttctctgatccagttcggatttgttgttgttgtgttgaaatgttgttccgatccggt 1209209  T
Q  301 tcgaattttgttgtggtaggctgtacgaactctccctctacctcttctaa 350  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||||||||    
T  1209210 tcgaatcttgttgtggtagtctgtacgaactctccttgtacctcttctaa 1209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 7614500 - 7614608
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7614500 gttcacggtttcagatctgaagttgttattggattcgaaatttttgtaatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 7614599  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  7614600 aatggtttt 7614608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 39022525 - 39022633
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||    
T  39022525 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttagatggatttatggctggaaaactactgaaaaccattaagtacatct 39022624  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  39022625 aatggtttt 39022633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 356 - 449
Target Start/End: Original strand, 1209352 - 1209445
Alignment:
Q  356 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 449  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  1209352 ttatggattttttgatgaattcgagagtggtagatgatgtttatgtgattttctatggtttagtgttcatgaggttcacagttttagatctgaa 1209445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8550704 - 8550837
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagtt-ttcacggttttagac 99  Q
    |||||||||||||||||||||| |||||||       ||| || ||||||||||||||||||||||||||||||| |||||    |||||||||||||||    
T  8550704 cggccacacatgatgattctggcgcggtgg-------tggtaccaccgcgccggagttcaaaactccgtccaaataaaaaaaaaattcacggttttagac 8550796  T
Q  100 atccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||| |||||||||||||||||||||||  ||||||||||||    
T  8550797 atctttttttgtgttgattccaaatatcaccttagatttct 8550837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1208899 - 1209039
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagtt-ttcacggttttagac 99  Q
    |||||||||||||||||||  |  ||| |||||  |||||||| || || | ||||||||||||||||||||||| |||||    |||| ||||||||||    
T  1208899 cggccacacatgatgattccagcacggcggccgccggtggcaccactgctctggagttcaaaactccgtccaaataaaaaaaaaattcatggttttagac 1208998  T
Q  100 atccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  1208999 atccttttttgtgttgattccaaatatcgccttagatttct 1209039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 7058348 - 7058442
Alignment:
Q  45 accgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||||||||||||||||||||||||||||||| |||||   | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7058348 accgcgccggagttcaaaactccgtccaaataaaaaaaaat-cacgattttagacatccttttttgtgttgattccaaatatcgccttagatttct 7058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 500 - 575
Target Start/End: Original strand, 1209443 - 1209518
Alignment:
Q  500 gaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatg 575  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  1209443 gaaactgctgaaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatg 1209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 504 - 578
Target Start/End: Original strand, 8551103 - 8551177
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  8551103 ctgctgaaaatcattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 8551177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 429 - 530
Target Start/End: Complemental strand, 15260367 - 15260266
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||||||||| ||||||||||||||||  |||| |||||||| ||||||| ||||| ||||| |||| |||||| |||||||||| |||||||||||    
T  15260367 gttcacggtttcatatctgaagttgttactatattcgaaatctttgtgatgttggaggggtttatagctgagaaactactggaaaccactaagtacatct 15260268  T
Q  529 aa 530  Q
    ||    
T  15260267 aa 15260266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 7058851 - 7058927
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||| ||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||    
T  7058851 aactgttggaaaccattaagtacatctaatggttttccacaggaaaatggttttggcattccggtacggtgatgatg 7058927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 2750768 - 2750844
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||| |||||||||    
T  2750768 aactgctgcaaaccattaagtacatctaatggttttccacatcaaaatggttttgacattccggtactgtgatgatg 2750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 4838725 - 4838769
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccg 68  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  4838725 gcggtggccggtggtggcaccaccgcgccggagttcaaaactccg 4838769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 429 - 473
Target Start/End: Complemental strand, 32986968 - 32986924
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatcttt 473  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  32986968 gttcacggtttcagatctgaagttgttactggattcgaaatcttt 32986924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 36577978 - 36578020
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  36577978 gcggtggccggtggtggcaccaccgcgccggagttcaaaactc 36578020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 2751065 - 2751108
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  2751065 tttccacagcaaaatggttttagcattccggtacggtgatgatg 2751108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 26872669 - 26872707
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26872669 gcggtggccggtggtggcaccaccgcgccggagttcaaa 26872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 26875127 - 26875165
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26875127 gcggtggccggtggtggcaccaccgcgccggagttcaaa 26875165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 575
Target Start/End: Original strand, 1209609 - 1209649
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatg 575  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  1209609 tttccacagcaaaatggttttggcattccggtacggtgatg 1209649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 23504597 - 23504565
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  23504597 tgctggaaaccattaagtacatctaatgatttt 23504565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 2750889 - 2750932
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||    
T  2750889 tttccacagcaaaatggttttttcattccggtactgtgatgatg 2750932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 2750977 - 2751020
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||    
T  2750977 tttccacagcaaaatggttttttcattccggtactgtgatgatg 2751020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 23091596 - 23091553
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  23091596 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 23091553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 23397199 - 23397232
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  23397199 ctgctggaaaccattaagtacatctaatggtttt 23397232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 575
Target Start/End: Complemental strand, 4835897 - 4835857
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatg 575  Q
    ||||||||  ||||||||||| |||||||||||||||||||    
T  4835897 tttccacagaaaaatggttttggcattccggtacggtgatg 4835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 575
Target Start/End: Complemental strand, 4841342 - 4841302
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatg 575  Q
    ||||||||  ||||||||||| |||||||||||||||||||    
T  4841342 tttccacagaaaaatggttttggcattccggtacggtgatg 4841302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 15809780 - 15809812
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  15809780 tgctggaaaccattaagtacatctaatggtttt 15809812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 23567583 - 23567615
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||| |||||||||||||||||||||||||||    
T  23567583 tgctgaaaaccattaagtacatctaatgatttt 23567615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 24472985 - 24472953
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  24472985 tgctggaaaccattaagtacatctaatggtttt 24472953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 27506810 - 27506778
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  27506810 tgctggaaaccattaagtacatctaatggtttt 27506778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 34343391 - 34343423
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  34343391 tgctggaaaccattaagtacatctaatggtttt 34343423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 35448550 - 35448582
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||| |||||    
T  35448550 tgctggaaaccattaagtacatctaataatttt 35448582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 532
Target Start/End: Original strand, 39022733 - 39022761
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatg 532  Q
    |||||||||||||||||||||||||||||    
T  39022733 ctgctggaaaccattaagtacatctaatg 39022761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 45409510 - 45409478
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  45409510 tgctggaaaccattaagtacatctaatggtttt 45409478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 205 - 537
Target Start/End: Complemental strand, 15974598 - 15974265
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15974598 ctacctcttgttcttcacggatccatttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttcg 15974499  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15974498 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagatgatgtttatgtga 15974399  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||||||||    
T  15974398 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggatttgaaatctttgtgatgttagatggatttatggctgggaaa 15974299  T
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||||    
T  15974298 ctgctggaaaccattaagtacatctaatgatttt 15974265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 205 - 351
Target Start/End: Original strand, 48305629 - 48305776
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48305629 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctctgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 48305728  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaac 351  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48305729 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaac 48305776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 205 - 329
Target Start/End: Original strand, 48691388 - 48691513
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48691388 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgattcggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 48691487  T
Q  304 aattttgttgtggtaggctgtacgaa 329  Q
    ||| ||||||| ||||||||||||||    
T  48691488 aatcttgttgttgtaggctgtacgaa 48691513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 15974797 - 15974663
Alignment:
Q  5 cacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 104  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||   || |||||||||||||||||    
T  15974797 cacacatgatgattccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaataaaaaaaaatt-acggttttagacatcct 15974699  T
Q  105 tttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||||||| |||||||||||||    
T  15974698 tttttgtgttgattccaaatatcgccttagatttct 15974663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 48305428 - 48305565
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| ||  ||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48305428 cggccacacatgatgattccggcacggcggccgtcggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 48305527  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||  ||||||||||||||||||||| | |||||||||||    
T  48305528 tcc--ttttgtgttgattccaaatatcgtcttagatttct 48305565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 30430266 - 30430374
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30430266 gttcacggtttcagagctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggttgggaaactgttggaaaccattaagtacatct 30430365  T
Q  529 aatgatttt 537  Q
    |||||||||    
T  30430366 aatgatttt 30430374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 356 - 449
Target Start/End: Original strand, 48305867 - 48305960
Alignment:
Q  356 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 449  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48305867 ttatggattttttgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 48305960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 48691184 - 48691323
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| ||  ||| |||||  |||||||| ||||| |  || ||||||||||||| ||||||||||||||||||||||||||||||    
T  48691184 cggccacacatgatgattccggcacggcggccgccggtggcaccaccgcactagatttcaaaactccgttcaaatcaaaaagttttcacggttttagaca 48691283  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  48691284 tccttttttgtgttgatttcaaatatcgccttagatttct 48691323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 33798359 - 33798467
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  33798359 gttcacggtttcagatctgaagttgttactggattcgaaatttttgtgatgttagagagatttatggctggaaaactgctggaaaccattaagtatatct 33798458  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  33798459 aatggtttt 33798467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 46024586 - 46024693
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  46024586 gttcacggttttagatctgaagttgttactggattcaaaatctttgtgatgttagagggatttatggct-ggaaactcccggaaaccattaagtacatct 46024684  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  46024685 aatggtttt 46024693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 429 - 530
Target Start/End: Complemental strand, 46573080 - 46572980
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  46573080 gttcacggtttcagatctgaagttgttactg-attcaaaatctttgtgatgttagagggatttatggctaggaaactgctggagatcattaagtacatct 46572982  T
Q  529 aa 530  Q
    ||    
T  46572981 aa 46572980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 48691561 - 48691651
Alignment:
Q  359 tggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 449  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  48691561 tggatttattgatgaattcgagagtggtagataatgtttatgtgattttctgtggtttagtgttcatgaggctcacgatttcagatctgaa 48691651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 15974257 - 15974181
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||    
T  15974257 aactgctggaaaccattaagtacatctaatggttttccacggcaaaatggttttggcattccggtacggtgatgatg 15974181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 46572965 - 46572891
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 576  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||    
T  46572965 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccagtacggtgatga 46572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 508 - 578
Target Start/End: Original strand, 48691700 - 48691770
Alignment:
Q  508 tggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  48691700 tggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 48691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 48306003 - 48306079
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||||||||||||    
T  48306003 aactgttggaaaccattaagtacatctaacggttttccacagcaaaatggttttggcattctggtacggtgatgatg 48306079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28396914 - 28396986
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaa 73  Q
    ||||||||||||||||||| ||  ||| |||||  |||||||| |||||||||||||||||||| ||||||||    
T  28396914 cggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggagttcaaaaccccgtccaa 28396986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 46572807 - 46572764
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  46572807 tttccacaacaaaatggttttggcattccggtacggtgatgatg 46572764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 15974093 - 15974050
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  15974093 tttccacagcaaaatggttttggcattccggtacggtgatgatg 15974050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 559892 - 559935
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  559892 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 559935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 569801 - 569844
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  569801 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 569844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 4185218 - 4185175
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  4185218 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 4185175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 5200608 - 5200651
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 66  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  5200608 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 5200651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 5209737 - 5209780
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 66  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  5209737 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 5209780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 17515799 - 17515842
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  17515799 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 17515842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 17537415 - 17537372
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  17537415 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 17537372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 27967395 - 27967438
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 66  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  27967395 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 27967438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 27976848 - 27976891
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 66  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  27976848 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 27976891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 537
Target Start/End: Original strand, 33798475 - 33798510
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33798475 aactgctggaaaccattaagtacatctaatggtttt 33798510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 48691861 - 48691904
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| ||||||||||||  |||||||||||||||||||||    
T  48691861 tttccacagcaaaatggttttgacattccggtacggtgatgatg 48691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 38411820 - 38411786
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagtt 58  Q
    |||||||||||||||||||| ||||||||||||||    
T  38411820 gcggtggccggtggtggcaccaccgcgccggagtt 38411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 24360521 - 24360554
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  24360521 ctgctggaaaccattaagtacatctaatggtttt 24360554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 32091287 - 32091320
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  32091287 ctgctggaaaccattaagtacatctaatggtttt 32091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 46024793 - 46024826
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  46024793 ctgctggaaaccattaagtacatctaatggtttt 46024826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 537
Target Start/End: Original strand, 48305958 - 48305995
Alignment:
Q  500 gaaactgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  48305958 gaaactgctggaaaccattaagtatatctaatggtttt 48305995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 5758055 - 5758087
Alignment:
Q  506 gctggaaaccattaagtacatctaatgattttc 538  Q
    ||||||||||||||||||||||||||| |||||    
T  5758055 gctggaaaccattaagtacatctaatggttttc 5758087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 6620738 - 6620770
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  6620738 tgctggaaaccattaagtacatctaatggtttt 6620770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 44426739 - 44426771
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  44426739 tgctggaaaccattaagtacatctaatggtttt 44426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 230; Significance: 1e-126; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 205 - 578
Target Start/End: Original strand, 877606 - 877975
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||| |||||||| |||| |||||     
T  877606 ctacctcttgttcttcacggatccgtttcgcgtttcggtcttct---ccgatccggttcggatttgttgttgtgttgaattgttgttctgatccggttca 877702  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 403  Q
    ||| ||||||||||||| |||||| ||||||||||||||||||||||  |||||  || ||||||   ||||| ||||||||||||||||||||||||||    
T  877703 aatcttgttgtggtaggttgtacgcactctccctctacctcttctaaaccgatttcgggtttattc--gaattcgagagtggtagatgatgtttatgtga 877800  T
Q  404 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaa 503  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  877801 ttttctatggtttagtgttcatgaggttcacagtttcagatttgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaa 877900  T
Q  504 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||| ||||||| ||||| |||||||||  | ||||||||| |||||| | |||||||||||||    
T  877901 ctgctggaaaccatttagtacatgtaatggttttccacagtataatggttttggcattctgatacggtgatgatg 877975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 205 - 578
Target Start/End: Complemental strand, 33346031 - 33345651
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33346031 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 33345932  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggattt------------attgatgaatttgagagtggtagatg 391  Q
    ||| ||||||| ||     ||  |||||||||||||| |||||||||  ||||| ||||| |            |||||||| ||||||||||||| |||    
T  33345931 aatcttgttgttgt-----gtt-gaactctccctctatctcttctaaaccgattctggatgttcttctggattcattgatgactttgagagtggtaaatg 33345838  T
Q  392 atgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggattt 491  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||| |||||||| |||||||| ||||||||    
T  33345837 atgtttatgtgattttctgtggtttagtgttcatgaggtttacggtttcagatctgaatttgttactaaattcgaaatctttgtgatgttaaagggattt 33345738  T
Q  492 atggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||| |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  33345737 atgactggcaaactgccggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 33345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 356 - 578
Target Start/End: Complemental strand, 24737112 - 24736891
Alignment:
Q  356 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 455  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  24737112 ttatggatttattgatgaattcgagagtggtagatgatgtttatgtgattttatgcggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 24737013  T
Q  456 actggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttt 555  Q
    | ||||||| |||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  24737012 a-tggattcgaaatctttgtgatgttagaggaatttatggcgggaaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggtttt 24736914  T
Q  556 tgcattccggtacggtgatgatg 578  Q
     ||||||  ||||||||||||||    
T  24736913 ggcattctagtacggtgatgatg 24736891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 205 - 363
Target Start/End: Complemental strand, 24737351 - 24737192
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 303  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24737351 ctacctcttgttcttcacggctccgtttcacgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 24737252  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 363  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  24737251 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggat 24737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 877404 - 877540
Alignment:
Q  2 ggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacat 101  Q
    |||||||||||||||||| || | |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  877404 ggccacacatgatgattccggcgtggtggccgatggtggcaccaccgcgtcggagttcaaaactccgtccaaatcaaaaagttttcacaattttagacat 877503  T
Q  102 ccttttttgtgttgattccaaatattgccttagattt 138  Q
    | ||||||||||||||||||||||| |||||| ||||    
T  877504 cattttttgtgttgattccaaatatcgccttaaattt 877540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24737558 - 24737416
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccg---gtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttag 97  Q
    ||||||||||||||||||| ||  |||||| ||   |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24737558 cggccacacatgatgattccggcacggtggtcgctggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaatagttttcacggttttag 24737459  T
Q  98 acatccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||||||| ||||||  ||||||||||||    
T  24737458 acatccttttttgtgttgattcaaaatatctccttagatttct 24737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33346236 - 33346098
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| || | |||||||| | ||||||| |||||||  ||||||||||||| |||||||| |||||   | ||||| ||||||||    
T  33346236 cggccacacatgatgattccggcgtggtggccgatagtggcaccaccgcgctagagttcaaaactctgtccaaataaaaaaaaat-cacgggtttagaca 33346138  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  33346137 tccttttttgtgtcgattccaaatatcgccttagatttct 33346098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 3042435 - 3042352
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    |||||||||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  3042435 gcggtggccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacgtttttaaacatccttttt 3042352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 878063 - 878106
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  878063 tttccacaacaaaatggttttggcattccggtacagtgatgatg 878106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 5995725 - 5995689
Alignment:
Q  25 cggtggccggtggtggcacaaccgcgccggagttcaa 61  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5995725 cggtggccggtggtggcaccaccgcgccggagttcaa 5995689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 14237882 - 14237850
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  14237882 tgctggaaaccattaagtacatctaatgatttt 14237850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 20216059 - 20215976
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||||||||| |||||||| |||||||||||| |||||||| | ||| | ||||||| |||| ||  ||||| |||||||||||    
T  20216059 gcggtggccggcggtggcaccaccgcgccggagctcaaaacttc-tccgattcaaaaactttttacatttttaaacatccttttt 20215976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 22110080 - 22109997
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||||||||| |||||||| |||||||||||| |||||||| | ||| | ||||||| |||| ||  ||||| |||||||||||    
T  22110080 gcggtggccggcggtggcaccaccgcgccggagctcaaaacttc-tccgattcaaaaactttttacatttttaaacatccttttt 22109997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 24919211 - 24919128
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    |||||||||||  ||||||| ||||||||||||||| ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  24919211 gcggtggccggcagtggcaccaccgcgccggagttcgaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 24919128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 578
Target Start/End: Original strand, 878210 - 878249
Alignment:
Q  539 cacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  878210 cacaacaaaatggttttgacattccggtacggtgatgatg 878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 24296438 - 24296481
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  24296438 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 24296481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 24310469 - 24310512
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  24310469 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 24310512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 24736803 - 24736760
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||    
T  24736803 tttccacaacaaaatggttttggcattccagtacggtgaagatg 24736760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 27048684 - 27048727
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  27048684 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 27048727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 27058928 - 27058971
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  27058928 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 27058971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 30996958 - 30997001
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 66  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  30996958 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 30997001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 18611920 - 18611953
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  18611920 ctgctggaaaccattaagtacatctaatggtttt 18611953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 30909346 - 30909379
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  30909346 ctgctggaaaccattaagtacatctaatggtttt 30909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 5488176 - 5488208
Alignment:
Q  25 cggtggccggtggtggcacaaccgcgccggagt 57  Q
    ||||||||||||||||||| |||||||||||||    
T  5488176 cggtggccggtggtggcaccaccgcgccggagt 5488208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 25119210 - 25119178
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  25119210 tgctggaaaccattaagtacatctaatggtttt 25119178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 537
Target Start/End: Complemental strand, 27079810 - 27079774
Alignment:
Q  501 aaactgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  27079810 aaactgctagaaaccattaagtacatctaatggtttt 27079774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 183; Significance: 1e-98; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 356 - 578
Target Start/End: Original strand, 638495 - 638717
Alignment:
Q  356 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 455  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  638495 ttatggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtcgtttcgtgttcatgaggttcacggtttcagatctaaagttgtt 638594  T
Q  456 actggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttt 555  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  638595 actggattcaaaatctttgtgatgttagagggatttatggctgggaaacagttggaaaccattaagtacatctaatggttttccacatcaaaatggtttt 638694  T
Q  556 tgcattccggtacggtgatgatg 578  Q
     ||||||||||||||||||||||    
T  638695 ggcattccggtacggtgatgatg 638717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 205 - 363
Target Start/End: Original strand, 638256 - 638415
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 303  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |    
T  638256 ctacctcttgttcttcatggatccgtttcgcgttttggtcttcttctccgatccggttcagatttgttgttgtgttgaagtgttattccgatccggtttg 638355  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 363  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  638356 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggat 638415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 205 - 350
Target Start/End: Complemental strand, 26447073 - 26446927
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 303  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||    
T  26447073 ctacctcttgttcttcacggattcgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtggttaagtgttgttctgatccggttcg 26446974  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaa 350  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26446973 aatcttgttgtggtaggctgtacgaactctccctccacctcttctaa 26446927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26447277 - 26447138
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    |||||||||||||||||||  | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26447277 cggccacacatgatgattccagcgcggtggccgatggtggcaccaccgtgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 26447178  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  26447177 tccttttttgtgttgattccaaatatcgccttagatttct 26447138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 429 - 578
Target Start/End: Original strand, 45256465 - 45256614
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45256465 gttcacggtttcagatatgaagttgtttctggatttgaaatctttgtgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 45256564  T
Q  529 aatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    || | |||| |||| |||||||||||| |||||||||| |||||||||||    
T  45256565 aaaggttttgcacagcaaaatggttttggcattccggtccggtgatgatg 45256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 638052 - 638190
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    |||||||||| |||||||| |   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  638052 cggccacacacgatgattccgacacggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 638151  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    ||| |||||||||||||||||||||| |||||||||||||    
T  638152 tcc-tttttgtgttgattccaaatatcgccttagatttct 638190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 18923812 - 18923920
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  18923812 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctagaaatcattaagtacatct 18923911  T
Q  529 aatgatttt 537  Q
    |||||||||    
T  18923912 aatgatttt 18923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 485 - 578
Target Start/End: Complemental strand, 26577672 - 26577579
Alignment:
Q  485 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26577672 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggttttggcattccggtacggtgatgatg 26577579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 4168911 - 4169019
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4168911 gttcacggtttcagatcttaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtacatct 4169010  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  4169011 aatggtttt 4169019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 51836700 - 51836592
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  51836700 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatattagagggatttatggctgggaaattgttggaaaccattaagtacatct 51836601  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  51836600 aatggtttt 51836592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 22180755 - 22180649
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  22180755 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgtt--agggatttatggctgggaaactactggaaaccattaagtacatct 22180658  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  22180657 aatggtttt 22180649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 436 - 537
Target Start/End: Original strand, 27764805 - 27764906
Alignment:
Q  436 gtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatt 535  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||    
T  27764805 gtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctggaaaactgttggaaaccattaagtacatctaatggtt 27764904  T
Q  536 tt 537  Q
    ||    
T  27764905 tt 27764906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 429 - 531
Target Start/End: Complemental strand, 36621334 - 36621232
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||| |||| |||||||||||||  |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  36621334 gttcacggtttcagatatgaatttgttactggatttgaaatctttgtgatgttagagggatttatggttgggaaactgatggaaaccattaagtacatct 36621235  T
Q  529 aat 531  Q
    |||    
T  36621234 aat 36621232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 21097668 - 21097776
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||| ||||||||||||||||||||||||||||  |||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  21097668 gttcacagtttcagatctgaagttgttactggatttgaaatttttgtgatgttagagagatttatggctgggaaactgctggaaatcattaagtatatct 21097767  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  21097768 aatggtttt 21097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 10473159 - 10473226
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacg 569  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  10473159 aactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacg 10473226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 502 - 577
Target Start/End: Complemental strand, 26446875 - 26446800
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgat 577  Q
    ||||| ||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||    
T  26446875 aactgttggaaaccattaagtacatctaatggttttccatatcaaaatggttttggcattccggtacggtgatgat 26446800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 578
Target Start/End: Complemental strand, 51836573 - 51836510
Alignment:
Q  515 cattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  51836573 cattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 51836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 38245558 - 38245631
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatg 575  Q
    |||||| ||||||||||||||| |||||||| ||||||||  |||||||||||| |||||||||||||||||||    
T  38245558 aactgccggaaaccattaagtagatctaatggttttccacggcaaaatggttttggcattccggtacggtgatg 38245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 52296772 - 52296728
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccg 68  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  52296772 gcggtggccggtggtggcaccactgcgccggagttcaaaactccg 52296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 10473459 - 10473502
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  10473459 tttccacaacaaaatagttttggcattccggtacggtgatgatg 10473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 12997569 - 12997531
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12997569 gcggtggccggtggtggcaccaccgcgccggagttcaaa 12997531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 27765022 - 27765055
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||||    
T  27765022 ctgctggaaaccattaagtacatctaatgatttt 27765055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 4749054 - 4749098
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagtt-caaaactcc 67  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  4749054 gcggtggccggtggtggcaccaccgcgccggagttccaaaactcc 4749098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 8157214 - 8157182
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  8157214 tgctggaaaccattaagtacatctaatgatttt 8157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 32215963 - 32215923
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 64  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  32215963 gcggtggccggtggtggcaccaccgcgccggagttcgaaac 32215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 52325243 - 52325275
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  52325243 tgctggaaaccattaagtacatctaatgatttt 52325275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 537
Target Start/End: Original strand, 4169027 - 4169062
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||| |||||||||||||||||||||||    
T  4169027 aactgctggaaaacattaagtacatctaatgatttt 4169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 10473328 - 10473371
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||| |||||||||||| |||||||||    
T  10473328 tttccacagcaaaatggttttggcattccggtacagtgatgatg 10473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 578
Target Start/End: Original strand, 38245738 - 38245777
Alignment:
Q  539 cacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  38245738 cacagcaaaatggttttggcattccggtacggtgatgatg 38245777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 538
Target Start/End: Complemental strand, 1728909 - 1728875
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgattttc 538  Q
    ||||||||||||||||||||||||||||| |||||    
T  1728909 ctgctggaaaccattaagtacatctaatggttttc 1728875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 537
Target Start/End: Original strand, 10473101 - 10473151
Alignment:
Q  487 gatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||| |||||||| || |||||||||| ||||||||||| ||||    
T  10473101 gatttatggctaggaaactgttgaaaaccattaactacatctaatggtttt 10473151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 577
Target Start/End: Original strand, 45256699 - 45256741
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgat 577  Q
    |||| ||| |||||||||||| |||||||||||||||||||||    
T  45256699 tttctacagcaaaatggttttggcattccggtacggtgatgat 45256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 18924020 - 18924053
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  18924020 ctgctggaaaccattaagtacatctaatggtttt 18924053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 20862305 - 20862338
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||| ||||||||||||||||    
T  20862305 ctgctggaaaccattaaatacatctaatgatttt 20862338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 38010649 - 38010682
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  38010649 ctgctggaaaccattaagtacatctaatggtttt 38010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 2124448 - 2124416
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  2124448 tgctggaaaccattaagtacatctaatggtttt 2124416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 9813049 - 9813017
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||| |||||||||||||||||||||||    
T  9813049 tgctggaaatcattaagtacatctaatgatttt 9813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 10374184 - 10374216
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||| |||||||||||||||||||||||||||    
T  10374184 tgctgaaaaccattaagtacatctaatgatttt 10374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 16474926 - 16474894
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  16474926 tgctggaaaccattaagtacatctaatggtttt 16474894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 17141906 - 17141823
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||| |||||||||||| | ||||||||||||||  ||| ||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  17141906 gcggtagccggtggtggcgccaccgcgccggagttttaaaatcc-tccgattcaaaaactttttacgtttttaaacatccttttt 17141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 531
Target Start/End: Original strand, 38245516 - 38245544
Alignment:
Q  503 actgctggaaaccattaagtacatctaat 531  Q
    |||||||||||||||||||||||||||||    
T  38245516 actgctggaaaccattaagtacatctaat 38245544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 38563909 - 38563877
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  38563909 tgctggaaaccattaagtacatctaatggtttt 38563877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 533
Target Start/End: Complemental strand, 41025166 - 41025138
Alignment:
Q  505 tgctggaaaccattaagtacatctaatga 533  Q
    |||||||||||||||||||||||||||||    
T  41025166 tgctggaaaccattaagtacatctaatga 41025138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 47568025 - 47568057
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||| |||||||||||||||||||||||||||    
T  47568025 tgctgaaaaccattaagtacatctaatgatttt 47568057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 51077001 - 51076969
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||| ||||||||||||||||    
T  51077001 tgctggaaaccattaaatacatctaatgatttt 51076969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 53526392 - 53526424
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||| ||||||||||||||||    
T  53526392 tgctggaaaccattaaatacatctaatgatttt 53526424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 54895523 - 54895555
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  54895523 tgctggaaaccattaagtacatctaatggtttt 54895555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 8e-66; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 205 - 363
Target Start/End: Original strand, 25193297 - 25193456
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 303  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25193297 ctacctcttgttcttcacagatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 25193396  T
Q  304 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 363  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  25193397 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggat 25193456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 4579488 - 4579360
Alignment:
Q  205 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4579488 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccaatacggttcggatttgttgttgtgttgaagtgttgtttcgatctggttcg 4579389  T
Q  304 aattttgttgtggtaggctgtacgaactc 332  Q
    ||| ||||||| |||||||||||||||||    
T  4579388 aatcttgttgtcgtaggctgtacgaactc 4579360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4579691 - 4579552
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    ||||||||||||||||||| ||  ||  |||||  |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4579691 cggccacacatgatgattccggcacgacggccgccggtggcaccaccgcgctggagttcaatactccgtccaaatcaaaaagttttcacggttttagaca 4579592  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  4579591 tccttttttgtgttgattccaaatatcgccttagatttct 4579552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 475 - 578
Target Start/End: Complemental strand, 14550858 - 14550755
Alignment:
Q  475 tgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgat 574  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  14550858 tgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtatggtgat 14550759  T
Q  575 gatg 578  Q
    ||||    
T  14550758 gatg 14550755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 20710318 - 20710426
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  20710318 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtgcatct 20710417  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  20710418 aatggtttt 20710426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 18297688 - 18297580
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18297688 gttcacggtttcagatctgaagttgttacaggattcttaatctttgtgatgttagagggatttatagctgggaaactgctggaaaccattaagtacatct 18297589  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  18297588 aatggtttt 18297580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 359 - 446
Target Start/End: Complemental strand, 4579315 - 4579228
Alignment:
Q  359 tggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 446  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4579315 tggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 4579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 25193092 - 25193230
Alignment:
Q  1 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 100  Q
    |||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||    |||||||||||||||    
T  25193092 cggccacacatgatgattctagcgcagtggccggtggtggcaccaccgcgccggagttcaaaattccatccaaatcaaaaa-aaatcacggttttagaca 25193190  T
Q  101 tccttttttgtgttgattccaaatattgccttagatttct 140  Q
    |||||||||||||||||| || |||| |||||||||||||    
T  25193191 tccttttttgtgttgatttcatatatcgccttagatttct 25193230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 485 - 578
Target Start/End: Original strand, 2264153 - 2264246
Alignment:
Q  485 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  2264153 gggatttatgactgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 2264246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 25193495 - 25193571
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  25193495 aactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 25193571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 501 - 578
Target Start/End: Complemental strand, 4579226 - 4579149
Alignment:
Q  501 aaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  4579226 aaactgctggaaaccattaagtatatctaatggttttccacagcaaaatgattttggcattccggtacggtgatgatg 4579149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 18297572 - 18297496
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||| |||||||||||||||    
T  18297572 aactgctggaaaccattaagtacatctaatggttttccatagcaaaatggttttggcattcaggtacggtgatgatg 18297496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 22186131 - 22186082
Alignment:
Q  17 ttctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactc 66  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  22186131 ttctggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactc 22186082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 2264465 - 2264508
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  2264465 tttccacaacaaaatggttttggcattccggtacggtgatgatg 2264508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 17686391 - 17686470
Alignment:
Q  28 tggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatc-aaaaagttttcacggttttagacatcctttt 107  Q
    |||||||||||||||| ||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||| ||||||||||    
T  17686391 tggccggtggtggcaccaccgcgccggagtttcaaactcc-tctaaatcaaaaaagtttttacgtttttaaacatcctttt 17686470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 536 - 578
Target Start/End: Complemental strand, 4579051 - 4579009
Alignment:
Q  536 ttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  4579051 ttccacagcaaaatggttttggcattccggtacggtgatgatg 4579009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 20622492 - 20622454
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20622492 gcggtggccggtggtggcaccaccgcgccggagttcaaa 20622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 28479967 - 28479887
Alignment:
Q  27 gtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||||||||||||| | ||||||||||||||  ||||| ||||||| ||||||| |||| ||  ||||| |||||||||||    
T  28479967 gtggccggtggtggcgccaccgcgccggagttttaaact-cgtccaattcaaaaactttttacatttttaaacatccttttt 28479887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 33308194 - 33308238
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactcc 67  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  33308194 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactcc 33308238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 14550655 - 14550612
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||| |||||||| |||||||||||||    
T  14550655 tttccacagcaaaatggttttggcattccgatacggtgatgatg 14550612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 18297408 - 18297365
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| ||||||||||||  |||||||||||||||||||||    
T  18297408 tttccacagcaaaatggttttgacattccggtacggtgatgatg 18297365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 21851547 - 21851590
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  21851547 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 21851590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 21859982 - 21860025
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  21859982 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 21860025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 25262627 - 25262584
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 66  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  25262627 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 25262584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 27425297 - 27425340
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  27425297 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 27425340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 27440343 - 27440386
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  27440343 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 27440386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 39756332 - 39756289
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 67  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  39756332 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 39756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 578
Target Start/End: Complemental strand, 4578791 - 4578749
Alignment:
Q  536 ttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  4578791 ttccacagcaaaatggttttggcattcaggtacggtgatgatg 4578749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 578
Target Start/End: Complemental strand, 4578921 - 4578879
Alignment:
Q  536 ttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||| |||||||||||| |||||||||||| |||||||||    
T  4578921 ttccacagcaaaatggttttggcattccggtacagtgatgatg 4578879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 4281121 - 4281088
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  4281121 ctgctggaaaccattaagtacatctaatggtttt 4281088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 34543055 - 34543088
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagt 57  Q
    |||||||||||||||||||| |||||||||||||    
T  34543055 gcggtggccggtggtggcaccaccgcgccggagt 34543088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 41345375 - 41345342
Alignment:
Q  504 ctgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  41345375 ctgctggaaaccattaagtacatctaatggtttt 41345342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 1095283 - 1095251
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  1095283 tgctggaaaccattaagtacatctaatggtttt 1095251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 12449158 - 12449126
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  12449158 tgctggaaaccattaagtacatctaatggtttt 12449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 21322012 - 21322044
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggag 56  Q
    |||||||||||||||||||| ||||||||||||    
T  21322012 gcggtggccggtggtggcaccaccgcgccggag 21322044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 22596408 - 22596376
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  22596408 tgctggaaaccattaagtacatctaatggtttt 22596376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 25575427 - 25575395
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  25575427 tgctggaaaccattaagtacatctaatggtttt 25575395  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 30777451 - 30777419
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  30777451 tgctggaaaccattaagtacatctaatggtttt 30777419  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 42364633 - 42364665
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  42364633 tgctggaaaccattaagtacatctaatggtttt 42364665  T

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Target: scaffold0238 (Bit Score: 90; Significance: 4e-43; HSPs: 3)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 429 - 530
Target Start/End: Complemental strand, 24828 - 24727
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctgaaaaccattaagtacatct 24729  T
Q  529 aa 530  Q
    ||    
T  24728 aa 24727  T

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Target: scaffold0238; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 535 - 576
Target Start/End: Complemental strand, 24559 - 24518
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatga 576  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  24559 tttccacagcaaaatggttttggcattccggtacggtgatga 24518  T

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Target: scaffold0238; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 578
Target Start/End: Complemental strand, 24703 - 24659
Alignment:
Q  534 ttttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||    
T  24703 ttttccacagcaaaatggttttggcattccggtacggtgaagatg 24659  T

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Target: scaffold0194 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 28157 - 28265
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  28157 gttcacggtttcagatctgaagttgttactagattcaaaatctttgtgatgttagagggatttatgactgggaaactggtggaaaccattaagtacatct 28256  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  28257 aatggtttt 28265  T

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Target: scaffold0097 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 14157 - 14265
Alignment:
Q  429 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 528  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  14157 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtgcatct 14256  T
Q  529 aatgatttt 537  Q
    |||| ||||    
T  14257 aatggtttt 14265  T

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Target: scaffold0009 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 441 - 537
Target Start/End: Complemental strand, 203453 - 203357
Alignment:
Q  441 agatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||| ||||    
T  203453 agatctgaagttgttactcgattcgaaatctttgtgatgttagagggatttatggctggaaaactcctgaaaatcattaagtacatctaatggtttt 203357  T

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Target: scaffold0338 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 6171 - 6247
Alignment:
Q  502 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  6171 aactgttggaaactattaagtacatataatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 6247  T

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Target: scaffold0338; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 6335 - 6378
Alignment:
Q  535 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 578  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  6335 tttccacagcaaaatggttttggcattccggtacggtgatgatg 6378  T

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Target: scaffold0338; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 500 - 537
Target Start/End: Original strand, 6126 - 6163
Alignment:
Q  500 gaaactgctggaaaccattaagtacatctaatgatttt 537  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6126 gaaactgctggaaaccattaagtacatctaatggtttt 6163  T

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Target: scaffold1120 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 430 - 351
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatc-aaaaagttttcacggttttagacatcc 103  Q
    |||||||||||||||||||| ||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||| ||||||    
T  430 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc-tctaaatcaaaaaagtttttacgtttttaaacatcc 351  T

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Target: scaffold0206 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 19550 - 19467
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  19550 gcggtggccggcggtggcaccaccgcgccggagttctaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 19467  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 96139 - 96171
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||||||||    
T  96139 tgctggaaaccattaagtacatctaatgatttt 96171  T

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Target: scaffold1896 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1896
Description:

Target: scaffold1896; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 475 - 437
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaa 62  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  475 gcggtggccggtagtggcaccaccgcgccggagttcaaa 437  T

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Target: scaffold0669 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 6040 - 6080
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 64  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  6040 gcggtggccggtggtggcaccaccgtgccggagttcgaaac 6080  T

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Target: scaffold0609 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 2512 - 2595
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||| |||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  2512 gcggtagccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 2595  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 23648 - 23616
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  23648 tgctggaaaccattaagtacatctaatggtttt 23616  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 20024 - 19992
Alignment:
Q  505 tgctggaaaccattaagtacatctaatgatttt 537  Q
    |||||||||||||||||||||||||||| ||||    
T  20024 tgctggaaaccattaagtacatctaatggtttt 19992  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 64680 - 64763
Alignment:
Q  24 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 108  Q
    ||||||| || ||||||||| ||||||||||||||  || |||| || |||||||||| | || ||| ||||| |||||||||||    
T  64680 gcggtggtcgttggtggcaccaccgcgccggagtttcaacctcc-tctaaatcaaaaattgtttacgtttttaaacatccttttt 64763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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