View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0610_low_35 (Length: 258)
Name: NF0610_low_35
Description: NF0610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0610_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 5488461 - 5488229
Alignment:
| Q |
1 |
tattgttactaacattaaagagaattttagctttgttttgggtcttaaaactgatgtgtttaaatcttgatctctacttatgacactatagttgatcaac |
100 |
Q |
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| T |
5488461 |
tattgttactatcattaaagagaattttagctttgttttgagtcttaaaactgatgtgtttaaatcttgatccctacttatgacactacagttgatcaac |
5488362 |
T |
|
| Q |
101 |
tat--aatttatgatgggtcaccaaattggtttttaagagttagttactccaagtacacttcaagtcgttacgttgtactcgttca--atcttttaccaa |
196 |
Q |
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| T |
5488361 |
tatagagtttatgatggatcaccaaattaatttttaagagttagttatttcaaatacactttagatcgttacattgtacgcgttcattatcttttaccaa |
5488262 |
T |
|
| Q |
197 |
tctaattcattctttatgaatatttacgagtat |
229 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
5488261 |
tctaattcattctttatgaatatttacgagtat |
5488229 |
T |
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