View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0610_low_41 (Length: 233)
Name: NF0610_low_41
Description: NF0610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0610_low_41 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 37990410 - 37990229
Alignment:
| Q |
1 |
acaactcgcatcaaaccttgtgttcattggaatctgaccacacaaattattatcgctcacgttcaacttatgcagatacctgagctccgagagtctctct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37990410 |
acaactcgcatcaaaccttgtgttcattggaatctgaccacacaaattattatcgctcacgttcaacttatgcagatacctgagctccgagagtctctct |
37990311 |
T |
|
| Q |
101 |
ggtagcttaccatagattttattgtgccttatatccaacttattcaaatccttcgataacccaactttggaaatatcaaaag |
182 |
Q |
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|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
37990310 |
ggtagcttaccatatattttattgtgccttatatccaacttattcaaatccttcgataacccaactttcgaaatatcaaaag |
37990229 |
T |
|
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