View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0610_low_8 (Length: 504)
Name: NF0610_low_8
Description: NF0610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0610_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 84 - 344
Target Start/End: Complemental strand, 31173953 - 31173693
Alignment:
| Q |
84 |
agacgtcgaaatggaataatttgttgcacatttctttgaggtccacatttgtacatttattaagggcttaaagcatgcttggttcctttgataatttaag |
183 |
Q |
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| T |
31173953 |
agacgtcgaaatggaataatttgttgcacatttcattgaggtccacacttgtacatttattaagggcttaaagcatgcttggttcctttgataatttaag |
31173854 |
T |
|
| Q |
184 |
catgatggaagaactaaaccaaaagtcaatagaggtttatgatcaccggtatatcctccttatctcgagttgttgaaaaagcaatattatagaaacctat |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31173853 |
catgatggaagaactaaaccaaaagtcaatagaggtttatgatcaccggtatatcctccttatctcgagttgttgaaaaagcaatattatagaaacctat |
31173754 |
T |
|
| Q |
284 |
aaattagatacagtggtttaatcggttgaatcgtggttgaactttaaactagatgttaacg |
344 |
Q |
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|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31173753 |
aaattagataaagtggtttaatcggttgaatcatggttgaactttaaactagatgttaacg |
31173693 |
T |
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