View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0611_high_17 (Length: 460)

Name: NF0611_high_17
Description: NF0611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0611_high_17
NF0611_high_17
[»] chr4 (59 HSPs)
chr4 (205-382)||(11417686-11417862)
chr4 (217-382)||(29651217-29651381)
chr4 (217-381)||(10424123-10424286)
chr4 (205-377)||(38143610-38143781)
chr4 (205-381)||(38694824-38695002)
chr4 (217-382)||(31836344-31836509)
chr4 (217-382)||(21166260-21166424)
chr4 (217-376)||(26610350-26610509)
chr4 (217-381)||(45235845-45236008)
chr4 (221-382)||(26611172-26611332)
chr4 (220-381)||(36865605-36865765)
chr4 (217-381)||(21165447-21165610)
chr4 (217-381)||(45230365-45230528)
chr4 (217-382)||(10424944-10425108)
chr4 (269-381)||(11417873-11417985)
chr4 (220-380)||(29650416-29650575)
chr4 (217-382)||(39522374-39522538)
chr4 (217-381)||(31835148-31835311)
chr4 (205-383)||(9939123-9939297)
chr4 (217-380)||(36864818-36864978)
chr4 (269-382)||(9939307-9939420)
chr4 (269-381)||(38694702-38694814)
chr4 (269-363)||(38143506-38143600)
chr4 (283-381)||(39523221-39523319)
chr4 (283-367)||(25970120-25970203)
chr4 (332-382)||(47377597-47377647)
chr4 (270-367)||(36450742-36450839)
chr4 (283-343)||(11806129-11806189)
chr4 (301-381)||(47376852-47376932)
chr4 (270-383)||(25970740-25970853)
chr4 (333-382)||(47198604-47198653)
chr4 (333-376)||(3847891-3847934)
chr4 (333-376)||(3848578-3848621)
chr4 (332-381)||(30808621-30808670)
chr4 (332-381)||(37275088-37275137)
chr4 (333-382)||(42544487-42544536)
chr4 (333-381)||(25371545-25371593)
chr4 (332-383)||(23425206-23425257)
chr4 (332-383)||(28684231-28684282)
chr4 (308-367)||(36451402-36451461)
chr4 (347-381)||(10424385-10424419)
chr4 (332-374)||(11680283-11680325)
chr4 (332-374)||(11688562-11688604)
chr4 (347-381)||(21166137-21166171)
chr4 (334-376)||(25370511-25370553)
chr4 (347-381)||(29650655-29650689)
chr4 (333-383)||(30478307-30478357)
chr4 (347-381)||(31836221-31836255)
chr4 (347-381)||(45235733-45235767)
chr4 (333-383)||(47199395-47199445)
chr4 (329-367)||(52077116-52077154)
chr4 (333-375)||(55159186-55159228)
chr4 (333-382)||(48013316-48013365)
chr4 (333-382)||(52757812-52757861)
chr4 (333-382)||(55160067-55160115)
chr4 (332-388)||(1014005-1014061)
chr4 (332-364)||(23383327-23383359)
chr4 (337-381)||(23865321-23865365)
chr4 (334-382)||(46765169-46765217)
[»] chr8 (26 HSPs)
chr8 (205-382)||(34992137-34992313)
chr8 (217-381)||(32536708-32536871)
chr8 (217-382)||(41859309-41859473)
chr8 (217-374)||(37639718-37639874)
chr8 (217-381)||(38023624-38023787)
chr8 (217-382)||(41859981-41860145)
chr8 (269-381)||(34992015-34992127)
chr8 (269-382)||(5034897-5035010)
chr8 (217-384)||(32537373-32537536)
chr8 (283-381)||(5035226-5035324)
chr8 (217-305)||(38024416-38024502)
chr8 (217-260)||(37640482-37640525)
chr8 (333-383)||(61452-61502)
chr8 (333-382)||(25876520-25876569)
chr8 (333-381)||(1365829-1365877)
chr8 (309-373)||(37640538-37640601)
chr8 (344-382)||(44098432-44098470)
chr8 (332-381)||(27918046-27918095)
chr8 (333-381)||(39254787-39254835)
chr8 (289-381)||(43924490-43924582)
chr8 (333-383)||(39255752-39255802)
chr8 (333-386)||(62240-62293)
chr8 (332-381)||(41092172-41092221)
chr8 (289-374)||(43924974-43925059)
chr8 (333-382)||(44751607-44751656)
chr8 (333-381)||(42345166-42345214)
[»] chr7 (34 HSPs)
chr7 (205-381)||(17145622-17145798)
chr7 (217-382)||(38071897-38072061)
chr7 (217-381)||(668179-668342)
chr7 (217-382)||(37864192-37864356)
chr7 (223-382)||(4261487-4261645)
chr7 (217-381)||(668988-669151)
chr7 (269-383)||(38778852-38778966)
chr7 (224-377)||(7677421-7677573)
chr7 (269-381)||(38779500-38779611)
chr7 (269-381)||(17145808-17145920)
chr7 (269-381)||(38072227-38072339)
chr7 (304-381)||(37468976-37469053)
chr7 (269-377)||(4261209-4261317)
chr7 (283-379)||(7677759-7677855)
chr7 (285-383)||(41194511-41194608)
chr7 (324-382)||(37468909-37468967)
chr7 (283-381)||(24322301-24322399)
chr7 (332-387)||(29006341-29006396)
chr7 (333-374)||(20890206-20890247)
chr7 (334-383)||(45887981-45888030)
chr7 (334-382)||(44909360-44909408)
chr7 (334-382)||(47331954-47332002)
chr7 (332-382)||(29007198-29007248)
chr7 (332-382)||(41224842-41224892)
chr7 (347-380)||(668420-668453)
chr7 (334-383)||(4985395-4985444)
chr7 (334-383)||(4989493-4989542)
chr7 (283-320)||(24321487-24321524)
chr7 (332-381)||(27599211-27599260)
chr7 (332-381)||(27600094-27600143)
chr7 (302-367)||(42607095-42607160)
chr7 (298-342)||(33323871-33323915)
chr7 (335-367)||(40319620-40319652)
chr7 (334-374)||(45887286-45887326)
[»] chr6 (24 HSPs)
chr6 (217-379)||(33479698-33479860)
chr6 (205-379)||(3542816-3542989)
chr6 (207-381)||(33018167-33018340)
chr6 (217-381)||(15083203-15083366)
chr6 (217-381)||(33480513-33480676)
chr6 (217-381)||(22579935-22580098)
chr6 (217-377)||(22587195-22587354)
chr6 (269-381)||(3542999-3543111)
chr6 (217-376)||(15082402-15082560)
chr6 (269-374)||(33018352-33018457)
chr6 (205-382)||(7193337-7193504)
chr6 (286-377)||(22582432-22582523)
chr6 (269-383)||(7193514-7193628)
chr6 (301-381)||(24126686-24126766)
chr6 (332-381)||(24125972-24126021)
chr6 (333-381)||(7531829-7531877)
chr6 (333-383)||(7159341-7159391)
chr6 (347-381)||(15082638-15082672)
chr6 (347-381)||(22580597-22580631)
chr6 (347-381)||(22587083-22587117)
chr6 (347-381)||(33479938-33479972)
chr6 (333-382)||(7532440-7532489)
chr6 (333-382)||(14337557-14337606)
chr6 (333-381)||(9574571-9574619)
[»] chr3 (43 HSPs)
chr3 (217-385)||(36750323-36750489)
chr3 (207-382)||(32490070-32490244)
chr3 (205-381)||(19132685-19132860)
chr3 (30-212)||(47676400-47676606)
chr3 (217-381)||(38923550-38923713)
chr3 (217-381)||(45242872-45243035)
chr3 (217-380)||(38922744-38922906)
chr3 (217-380)||(45242067-45242229)
chr3 (217-383)||(41755497-41755662)
chr3 (217-383)||(3997926-3998091)
chr3 (217-379)||(3970994-3971155)
chr3 (221-383)||(3971791-3971952)
chr3 (217-383)||(44686253-44686417)
chr3 (217-382)||(41756317-41756481)
chr3 (217-381)||(52491891-52492049)
chr3 (217-379)||(3998726-3998887)
chr3 (269-381)||(19132563-19132675)
chr3 (275-381)||(32489946-32490052)
chr3 (227-382)||(44687058-44687212)
chr3 (269-376)||(36750050-36750157)
chr3 (269-382)||(52492215-52492328)
chr3 (382-457)||(47671868-47671943)
chr3 (334-381)||(31556217-31556264)
chr3 (47-173)||(47676617-47676744)
chr3 (332-383)||(49756273-49756324)
chr3 (332-382)||(14667296-14667345)
chr3 (335-381)||(17226968-17227014)
chr3 (332-382)||(37105076-37105126)
chr3 (269-347)||(45500507-45500584)
chr3 (124-173)||(47675224-47675273)
chr3 (30-111)||(47676372-47676453)
chr3 (332-381)||(49757181-49757230)
chr3 (332-380)||(42145277-42145325)
chr3 (334-381)||(31556188-31556235)
chr3 (333-384)||(43638078-43638129)
chr3 (347-381)||(38923438-38923472)
chr3 (339-381)||(42144369-42144411)
chr3 (347-381)||(45242307-45242341)
chr3 (340-381)||(17227955-17227996)
chr3 (333-382)||(25329382-25329431)
chr3 (289-374)||(38337433-38337518)
chr3 (30-99)||(47675145-47675213)
chr3 (333-381)||(39901846-39901894)
[»] chr2 (20 HSPs)
chr2 (205-382)||(38834386-38834562)
chr2 (217-381)||(21471839-21472002)
chr2 (217-383)||(21471015-21471180)
chr2 (217-382)||(37547997-37548163)
chr2 (269-382)||(38834572-38834685)
chr2 (269-381)||(13134318-13134430)
chr2 (269-381)||(14573261-14573372)
chr2 (270-383)||(14573936-14574049)
chr2 (283-381)||(4479652-4479750)
chr2 (333-381)||(33433160-33433208)
chr2 (345-382)||(1164788-1164825)
chr2 (333-382)||(5276464-5276513)
chr2 (333-383)||(4478849-4478899)
chr2 (332-382)||(30545434-30545484)
chr2 (332-381)||(16426553-16426602)
chr2 (333-382)||(19521917-19521966)
chr2 (332-381)||(40992222-40992271)
chr2 (329-381)||(30544727-30544779)
chr2 (334-382)||(41984726-41984774)
chr2 (335-383)||(45139690-45139738)
[»] scaffold0311 (1 HSPs)
scaffold0311 (217-382)||(44-209)
[»] chr1 (38 HSPs)
chr1 (217-381)||(16270207-16270371)
chr1 (205-381)||(43737729-43737904)
chr1 (217-383)||(51974435-51974600)
chr1 (217-381)||(51975112-51975275)
chr1 (207-381)||(23440617-23440789)
chr1 (217-383)||(48972330-48972495)
chr1 (220-381)||(16271036-16271196)
chr1 (220-381)||(9947995-9948155)
chr1 (269-381)||(23440801-23440913)
chr1 (217-386)||(38931131-38931300)
chr1 (269-382)||(43737914-43738027)
chr1 (269-381)||(9948823-9948935)
chr1 (217-381)||(48971705-48971868)
chr1 (217-381)||(38930312-38930475)
chr1 (269-381)||(50827027-50827138)
chr1 (217-367)||(6076753-6076901)
chr1 (283-381)||(193850-193948)
chr1 (287-351)||(27888701-27888765)
chr1 (283-367)||(6075988-6076072)
chr1 (218-357)||(31390713-31390847)
chr1 (332-382)||(1012546-1012596)
chr1 (269-363)||(47334217-47334310)
chr1 (283-381)||(47334850-47334948)
chr1 (333-382)||(51987826-51987875)
chr1 (332-383)||(1013471-1013522)
chr1 (333-382)||(35616775-35616824)
chr1 (333-381)||(8560839-8560887)
chr1 (302-346)||(40649536-40649580)
chr1 (333-381)||(51988464-51988512)
chr1 (347-381)||(16270901-16270935)
chr1 (347-381)||(38930574-38930608)
chr1 (333-382)||(45064685-45064734)
chr1 (335-380)||(49611562-49611607)
chr1 (333-381)||(194701-194749)
chr1 (334-374)||(14924681-14924721)
chr1 (334-374)||(14925343-14925383)
chr1 (333-381)||(37874064-37874112)
chr1 (333-381)||(49610706-49610754)
[»] chr5 (28 HSPs)
chr5 (217-381)||(15183902-15184065)
chr5 (217-381)||(15183088-15183252)
chr5 (221-382)||(33002705-33002865)
chr5 (217-381)||(686417-686579)
chr5 (233-384)||(8204117-8204267)
chr5 (205-382)||(8040194-8040370)
chr5 (217-380)||(687233-687395)
chr5 (269-382)||(12190094-12190207)
chr5 (269-382)||(8040380-8040493)
chr5 (269-383)||(36626566-36626680)
chr5 (283-382)||(33001931-33002030)
chr5 (334-381)||(39950404-39950451)
chr5 (283-382)||(33283973-33284072)
chr5 (205-260)||(36626501-36626556)
chr5 (332-381)||(4608589-4608638)
chr5 (333-382)||(13654932-13654981)
chr5 (345-381)||(39950444-39950480)
chr5 (334-381)||(2319266-2319313)
chr5 (332-375)||(4607470-4607513)
chr5 (347-381)||(686667-686701)
chr5 (289-375)||(17767547-17767633)
chr5 (334-383)||(2319968-2320017)
chr5 (335-376)||(39167442-39167483)
chr5 (331-383)||(13404701-13404753)
chr5 (333-381)||(16971033-16971081)
chr5 (334-382)||(26268343-26268391)
chr5 (333-381)||(26688166-26688214)
chr5 (333-381)||(26957897-26957945)
[»] scaffold0041 (3 HSPs)
scaffold0041 (283-381)||(27221-27319)
scaffold0041 (292-381)||(27534-27623)
scaffold0041 (217-257)||(27498-27538)
[»] scaffold0332 (1 HSPs)
scaffold0332 (269-381)||(9194-9306)
[»] scaffold0155 (1 HSPs)
scaffold0155 (332-381)||(17339-17388)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 205 - 382
Target Start/End: Complemental strand, 11417862 - 11417686
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||    
T  11417862 attatctttcacatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaata-taatctagtggttgagagagtatgataggaatatgt 11417764  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11417763 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 11417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 29651217 - 29651381
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  29651217 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 29651315  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29651316 ctaatagatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 29651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 10424286 - 10424123
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10424286 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatagaaatatgttcctcatttaat 10424188  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10424187 ctaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 205 - 377
Target Start/End: Original strand, 38143610 - 38143781
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||    
T  38143610 attatctttcacatgggtgtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgt 38143708  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatgg 377  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  38143709 tcctcatttaatctaatggacatgaccaactttcccatggtgggaaagaactctcatttcccaaattaaatgg 38143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 205 - 381
Target Start/End: Original strand, 38694824 - 38695002
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnn--taatctagtggttaagagagtatgatagaaatat 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||           ||||||||||||| |||||||||||||  |||||    
T  38694824 attatctttcacatgggtgtgtggggacatgaaagagagagtgtgaaagatagtagtataaaaaaataatctagtggttgagagagtatgatatgaatat 38694923  T
Q  303 gttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  38694924 tttcctcatttaatctaatagacatgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 31836344 - 31836509
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    |||||||||||||| ||| |||||||| |||||||||||| |||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31836344 atgggtgtgtgggggcataaaagagagagtgtgaaagataatataaaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaat 31836443  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  31836444 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttctcaaattaaatggcacct 31836509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 21166260 - 21166424
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  21166260 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 21166358  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  21166359 ctaatggacatgatcaactttcccatgatgggaaagaactctcctttctcaaattaaatggcacct 21166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 217 - 376
Target Start/End: Complemental strand, 26610509 - 26610350
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  26610509 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaat 26610410  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatg 376  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  26610409 ctaatggacatgatcaattttcccatggtgggaaagaactctcatttcccaaattaaatg 26610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 45235845 - 45236008
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  45235845 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagaatatgatagaaatatgttcctcatttaat 45235943  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  45235944 ctaatggacatgattaactttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 221 - 382
Target Start/End: Original strand, 26611172 - 26611332
Alignment:
Q  221 gtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaa 320  Q
    ||||||||||||||||||||||| |||| |||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  26611172 gtgtgtggggacatgaaagagagagtgtaaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaatctaa 26611270  T
Q  321 tagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  26611271 tggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 220 - 381
Target Start/End: Original strand, 36865605 - 36865765
Alignment:
Q  220 ggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatcta 319  Q
    |||||||||||||||||||||||| |||| |||||||||||        ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  36865605 ggtgtgtggggacatgaaagagagagtgtaaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaatcta 36865703  T
Q  320 atagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    || || |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  36865704 atggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 21165610 - 21165447
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    |||||||||||||||||||||||||||  |||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21165610 atgggtgtgtggggacatgaaagagagactgtgaaagatagtataaaaaat-taatctagtggttgagagagtatgatagaaatatgttcctcatttaat 21165512  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    | ||| |||||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||    
T  21165511 caaatggacatgatcaactttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 45230528 - 45230365
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  45230528 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 45230430  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||  | |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  45230429 ctaatgaatatgatcaactttcccatggtgggaaagaactctcttttcccgaattaaatggcacc 45230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 10424944 - 10425108
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||        ||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  10424944 atgggtgtgaggggacatgaaagagagagtgtgaaagataatataaaaaaa-taatctagtggttgagagagtatgataggaatatattcctcatttaat 10425042  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  10425043 ctaatggatatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 10425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 11417873 - 11417985
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11417873 taatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaa 11417972  T
Q  369 attaaatggcacc 381  Q
    |||||||| ||||    
T  11417973 attaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 220 - 380
Target Start/End: Complemental strand, 29650575 - 29650416
Alignment:
Q  220 ggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatcta 319  Q
    ||||||||||||||||||| |||| ||||||||||||||||        ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  29650575 ggtgtgtggggacatgaaaaagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaatcta 29650477  T
Q  320 atagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcac 380  Q
    || ||||||||||||||||||| | ||| ||| ||||||| ||||||||||||||||||||    
T  29650476 atggacatgatcaactttcccaagatggaaaagaactctcatttcccaaattaaatggcac 29650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 217 - 382
Target Start/End: Complemental strand, 39522538 - 39522374
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  39522538 atgggtgtgtggggacatgaaagagggagtgcgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 39522440  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| || |||||||||||||||||||||  ||| |||| ||||||||||||||||||| |||||    
T  39522439 ctaatggatatgatcaactttcccatggtgaaaaagaactatcctttcccaaattaaatgacacct 39522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 31835311 - 31835148
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  31835311 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaga-taatctagtggttgagagagtatgataggaatatgttcctcgtttaat 31835213  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||| ||||||||||| ||||||||||| |||| | ||||  ||||||||||||||||    
T  31835212 ctaatggacataatcaactttcctatggtgggaaagaactatactttttcaaattaaatggcacc 31835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 383
Target Start/End: Complemental strand, 9939297 - 9939123
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||        ||||||||||||| |||||||||||||  |||||||    
T  9939297 attatctttcacatgggtgtgtggggatatgaaagagagaatgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataagaatatgt 9939199  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    | ||||||||||||||| |||||||||||||||||||| |    ||| |||||| ||||||||||||||||| ||||||    
T  9939198 ttctcatttaatctaatggacatgatcaactttcccataga---aaagaactctactttcccaaattaaatgacaccta 9939123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 217 - 380
Target Start/End: Complemental strand, 36864978 - 36864818
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||| |||||||||||||||||||||  | |||||||||||||        ||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  36864978 atgggagtgtggggacatgaaagagag--tatgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgtttctcatttaat 36864882  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcac 380  Q
    ||||| |||||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  36864881 ctaatggacatgatcaactttctcatggtgagaaagaactctcctttcccaaattaaatagcac 36864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 9939307 - 9939420
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    |||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||| |||    
T  9939307 taatatagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactcccctttctcaa 9939406  T
Q  369 attaaatggcacct 382  Q
    ||||||||||||||    
T  9939407 attaaatggcacct 9939420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 38694814 - 38694702
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||| ||||||| ||||||||||| ||||    
T  38694814 taatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatgctgggaaagaactctccttttccaa 38694715  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  38694714 attaaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 38143600 - 38143506
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctccttt 363  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||    
T  38143600 taatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctccttt 38143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 39523221 - 39523319
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||| || | || | |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39523221 agagagtatggtaaagatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 25970203 - 25970120
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttccca 367  Q
    ||||||||||||| | || |||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||    
T  25970203 agagagtatgataaagatttgtttctcatttaatctaatggacat-atcaactttcccatggtgggaaacaactcccctttccca 25970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 47377597 - 47377647
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  47377597 aactttcccatggtgggaaacaactcccctttcccaaattaaatggcacct 47377647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 367
Target Start/End: Complemental strand, 36450839 - 36450742
Alignment:
Q  270 aatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttccca 367  Q
    |||||||||  | |||||||| |||| | || |||| ||||||||||| ||| ||||| ||||||||||||||||||| ||| ||||| |||||||||    
T  36450839 aatctagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataatcaactttcccatggtggaaaacaactcccctttccca 36450742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 11806189 - 11806129
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatg 343  Q
    |||||||| |||| |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  11806189 agagagtaggataaaaatgtgttcctcatttaatctaatggacatgattaactttcccatg 11806129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 381
Target Start/End: Complemental strand, 47376932 - 47376852
Alignment:
Q  301 atgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||| |||||||||| || ||  | |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  47376932 atgttcttcatttaatccaaaagttaagatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 25970740 - 25970853
Alignment:
Q  270 aatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaa 369  Q
    |||||||||  | |||||||| |||| | || |||| ||||||||||  ||| ||||| |||||||||| |||||||||||| ||||| | ||||||| |    
T  25970740 aatctagtgtatgagagagtaggataaagatttgttactcatttaattcaatggacataatcaactttctcatggtgggaaacaactcccttttcccata 25970839  T
Q  370 ttaaatggcaccta 383  Q
     |||||| ||||||    
T  25970840 ctaaatgccaccta 25970853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 47198653 - 47198604
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  47198653 actttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacct 47198604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 376
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatg 376  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 376
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatg 376  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 30808670 - 30808621
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  30808670 aactttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 37275137 - 37275088
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  37275137 aactttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 42544536 - 42544487
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| ||||||||||||| || ||| |||||||||||||||||||||||    
T  42544536 acttttccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 42544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||| |||||||||||| || ||||||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 383
Target Start/End: Original strand, 23425206 - 23425257
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||||||||||||||||| |||||||| |||||| | |||||| ||||||    
T  23425206 aactttcccatggtgggaaacaactctccattcccatactaaatgccaccta 23425257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 383
Target Start/End: Original strand, 28684231 - 28684282
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||||| ||||| ||||| || ||||||||||||||||||||| ||||||    
T  28684231 aactttcctatggtaggaaaaaagtctcctttcccaaattaaatgtcaccta 28684282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 367
Target Start/End: Original strand, 36451402 - 36451461
Alignment:
Q  308 tcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttccca 367  Q
    |||||||||||||| ||||| ||||||||| |||||||| |||| |||||  ||||||||    
T  36451402 tcatttaatctaatggacataatcaacttttccatggtgagaaacaactcctctttccca 36451461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 10424385 - 10424419
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  10424385 ggaaagaactctcctttcccaaattaaatggcacc 10424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 374
Target Start/End: Complemental strand, 11680325 - 11680283
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    |||||||||||||||||||| ||||  ||||||||||||||||    
T  11680325 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11680283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 374
Target Start/End: Complemental strand, 11688604 - 11688562
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    |||||||||||||||||||| ||||  ||||||||||||||||    
T  11688604 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 21166171 - 21166137
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  21166171 ggaaagaactctcctttcccaaattaaatggcacc 21166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 25370553 - 25370511
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatg 376  Q
    |||||||||||||||||| ||||  ||||||||||||||||||    
T  25370553 ctttcccatggtgggaaaaaactagcctttcccaaattaaatg 25370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 29650655 - 29650689
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  29650655 ggaaagaactctcctttcccaaattaaatggcacc 29650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 30478357 - 30478307
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcaccta 30478307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 31836255 - 31836221
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  31836255 ggaaagaactctcctttcccaaattaaatggcacc 31836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 45235767 - 45235733
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  45235767 ggaaagaactctcctttcccaaattaaatggcacc 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 47199395 - 47199445
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||| ||||||||||| || |||| |||||||||||||||| ||||||    
T  47199395 actttcctatggtgggaaagaagtctcttttcccaaattaaatgccaccta 47199445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 367
Target Start/End: Complemental strand, 52077154 - 52077116
Alignment:
Q  329 atcaactttcccatggtgggaaataactctcctttccca 367  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  52077154 atcaactttcccatcatgggaaataactctcctttccca 52077116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 55159228 - 55159186
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaat 375  Q
    ||||||||||||| ||||| || ||||||||||||||||||||    
T  55159228 actttcccatggtaggaaagaagtctcctttcccaaattaaat 55159186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 48013365 - 48013316
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 48013316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 52757861 - 52757812
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||| |||| |||||| || ||| |||||||||||||||||||||||    
T  52757861 actttcctatggagggaaaaaagtcttctttcccaaattaaatggcacct 52757812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 55160067 - 55160115
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||| |||| || ||||||||||||||||||||| |||||    
T  55160067 actttcccatggtgagaaa-aagtctcctttcccaaattaaatgccacct 55160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 1014005 - 1014061
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacctagtttc 388  Q
    |||||||||||||||||||| ||||   ||| ||||||||||||| |||||| ||||    
T  1014005 aactttcccatggtgggaaacaacttcacttacccaaattaaatgtcacctattttc 1014061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 23383359 - 23383327
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttc 364  Q
    |||||||||||||||||||| ||||||||||||    
T  23383359 aactttcccatggtgggaaacaactctcctttc 23383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 381
Target Start/End: Original strand, 23865321 - 23865365
Alignment:
Q  337 tcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||    
T  23865321 tcccatggtgggaaacaagtctcctttcacaaattaaacggcacc 23865365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 46765169 - 46765217
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||| ||||   ||||||||||||||||| |||||    
T  46765169 ctttcccatggtgggaaaaaactagtctttcccaaattaaatgccacct 46765217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 205 - 382
Target Start/End: Original strand, 34992137 - 34992313
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        |||| |||||||| |||||||||||||| |||||||    
T  34992137 attatctttcacatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatttagtggttgagagagtatgataggaatatgt 34992235  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34992236 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 34992313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 32536871 - 32536708
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  32536871 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttccccatttaat 32536773  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  32536772 ctaatggacatgatcaactttcccatggtgggaaagaactctcatttcctaaattaaatggcacc 32536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 217 - 382
Target Start/End: Complemental strand, 41859473 - 41859309
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||  ||||||||| |||||||||    
T  41859473 atgggtgtgtggggatatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatatgaatatgttcttcatttaat 41859375  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41859374 ctaacggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 217 - 374
Target Start/End: Complemental strand, 37639874 - 37639718
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  37639874 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatcataggaatatgttcctcatttaat 37639776  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    |||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37639775 ctaatgaatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 38023787 - 38023624
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38023787 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatagaaatatgttcctcatttaat 38023689  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||  |||||||||||||| ||||| ||| ||| || ||||||||||||||||||||| ||||    
T  38023688 ctaatgaacatgatcaacttttccatgatggaaaagaattctcctttcccaaattaaatgacacc 38023624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 41859981 - 41860145
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        |||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  41859981 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatatagtggttgagaaagtatgatagaaatatgttcctcatttaat 41860079  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| ||||||||||||||| |||| ||   |||||||||| |||||||||||||||||||||||    
T  41860080 ctaatggacatgatcaacttttccatagtaaaaaataactcttctttcccaaattaaatggcacct 41860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 34992127 - 34992015
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  34992127 taatttagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatggtggaaaataactctcgtttcccaa 34992028  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  34992027 attaaatggcacc 34992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 269 - 382
Target Start/End: Complemental strand, 5035010 - 5034897
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  5035010 taatctagtggttgagagagtatgatatgaatatgttcctcattcaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaa 5034911  T
Q  369 attaaatggcacct 382  Q
    ||||||||||||||    
T  5034910 attaaatggcacct 5034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 217 - 384
Target Start/End: Original strand, 32537373 - 32537536
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||        ||||||||||||| |||||||||||||  ||||||||||| |||||||    
T  32537373 atgggtgtgtggggacatgaaagagagagtgcgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataagaatatgttccttatttaat 32537471  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacctag 384  Q
     |||| |||||||| ||||||| ||   ||| ||| ||||||| ||||||||||||||||| ||||||    
T  32537472 ataatggacatgattaactttctca---tggaaaagaactctcatttcccaaattaaatggtacctag 32537536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 5035226 - 5035324
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||  ||| | |||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  5035226 agagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctttcccaaattaaatggcacc 5035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 38024416 - 38024502
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgtt 305  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||||||||||||    
T  38024416 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtat--aaaaaataatctagtggttgagagagtatgatagaaatatgtt 38024502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 37640482 - 37640525
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtat 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  37640482 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtat 37640525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 61502 - 61452
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  61502 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccaccta 61452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 25876569 - 25876520
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  25876569 actttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 1365877 - 1365829
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  1365877 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 37640538 - 37640601
Alignment:
Q  309 catttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaa 373  Q
    |||||||||||||| ||||||||||| ||||||| |||  ||| |||||||||||||||||||||    
T  37640538 catttaatctaataaacatgatcaac-ttcccatagtgtaaaaaaactctcctttcccaaattaa 37640601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 44098432 - 44098470
Alignment:
Q  344 gtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  44098432 gtgggaaagaactctcctttcccaaattaaatggcacct 44098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 27918046 - 27918095
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||||| || |||| |||||||||||||| ||||||    
T  27918046 aactttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 39254835 - 39254787
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  39254835 actttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 43924582 - 43924490
Alignment:
Q  289 tatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||| ||||||||||   |||||||||||  | ||  || | |||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  43924582 tatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaacttccctttcccaaattaaatgccacc 43924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 39255752 - 39255802
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| ||||||    
T  39255752 actttcccatggtgggaaagaagtctcatttcccaagttaaatgccaccta 39255802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 62240 - 62293
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacctagtt 386  Q
    ||||||| ||||||||||| || ||||||||| ||||||||||| |||| ||||    
T  62240 actttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacccagtt 62293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 41092221 - 41092172
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||||    
T  41092221 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 41092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 43924974 - 43925059
Alignment:
Q  289 tatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    ||||||| ||||||||||   |||||||||||  | ||  || ||||||| |||||||||||| ||||  ||||||||||||||||    
T  43924974 tatgataaaaatatgttctctatttaatctaacggtcaaaattaactttctcatggtgggaaacaacttccctttcccaaattaaa 43925059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 44751656 - 44751607
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||| ||||||| || ||||||||||||| ||||||| |||||    
T  44751656 actttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 3e-64; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 205 - 381
Target Start/End: Complemental strand, 17145798 - 17145622
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||    
T  17145798 attatctttcacatgaatgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgt 17145699  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17145698 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 217 - 382
Target Start/End: Complemental strand, 38072061 - 38071897
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  38072061 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 38071963  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  38071962 ctaatggacatgatcaactttcccatgatgggaaagaactctcctttcctaaattaaatggcacct 38071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 668342 - 668179
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        |||||| |||||| |||||||||||||| ||||||||| |||||||||    
T  668342 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctggtggttgagagagtatgataggaatatgttcttcatttaat 668244  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  668243 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 37864192 - 37864356
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  37864192 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgtttctcatttaat 37864290  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  37864291 ctaatggacatgatcaactttcccatggtgggaaagaactcttatttcccaaattaaatggcacct 37864356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 223 - 382
Target Start/End: Original strand, 4261487 - 4261645
Alignment:
Q  223 gtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaata 322  Q
    ||||||||||||||||||||| ||||||||||||||||        ||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  4261487 gtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctaatggttgagagagtatgatagaaatatgttcctcatttaatctaatg 4261585  T
Q  323 gacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  4261586 gagatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 4261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 668988 - 669151
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||| ||    
T  668988 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttgat 669086  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| || |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  669087 ctaatggatatgatcaactttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 269 - 383
Target Start/End: Complemental strand, 38778966 - 38778852
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  38778966 taatctagtggttgagagagtatgataggaatatgctcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaa 38778867  T
Q  369 attaaatggcaccta 383  Q
    |||||||||||||||    
T  38778866 attaaatggcaccta 38778852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 224 - 377
Target Start/End: Complemental strand, 7677573 - 7677421
Alignment:
Q  224 tgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatag 323  Q
    |||||||||||||||||||| |||| |||||||||||        |||| |||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  7677573 tgtggggacatgaaagagagagtgtaaaagatagtataaaaaaa-taatttagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgg 7677475  T
Q  324 acatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatgg 377  Q
    ||||||||||||||  |||||||||||| || ||||||||||||||||||||||    
T  7677474 acatgatcaactttttcatggtgggaaagaattctcctttcccaaattaaatgg 7677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 38779500 - 38779611
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    |||||||||| || ||||||||| |||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  38779500 taatctagtg-ttgagagagtattataagaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaa 38779598  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  38779599 attaaatggcacc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 17145808 - 17145920
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||| ||   ||| ||||||||||||||||    
T  17145808 taatctagtggttgagagagtatgataggaatatgttattcatttaatctaatggacatgatcaactttcccatagtaaaaaagaactctcctttcccaa 17145907  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  17145908 attaaatggcacc 17145920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 38072227 - 38072339
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||  ||| | ||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  38072227 taatctagtggttgagagagtatgataagaatgtattcatcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcatttcccaa 38072326  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  38072327 attaaatggcacc 38072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 37468976 - 37469053
Alignment:
Q  304 ttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37468976 ttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 269 - 377
Target Start/End: Complemental strand, 4261317 - 4261209
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||  ||| | |||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||    
T  4261317 taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtagaaaagaactctcctttcctaa 4261218  T
Q  369 attaaatgg 377  Q
    |||||||||    
T  4261217 attaaatgg 4261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 379
Target Start/End: Original strand, 7677759 - 7677855
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 379  Q
    ||||| |||||||  ||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7677759 agagaatatgataagaatgtgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggca 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 383
Target Start/End: Complemental strand, 41194608 - 41194511
Alignment:
Q  285 agagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||||||||  ||||||||||||||| ||| |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41194608 agagtatgataagaatatgttcctcatt-aatttaatggacatgattaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccta 41194511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 37468967 - 37468909
Alignment:
Q  324 acatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37468967 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 24322301 - 24322399
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||| |||| |||||||||||| ||||||  | ||  |  | |||||||||||||||| | ||||  |||||||||||||||||||||||    
T  24322301 agagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaattaaatggcacc 24322399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 387
Target Start/End: Complemental strand, 29006396 - 29006341
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacctagttt 387  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||||| ||||    
T  29006396 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacctggttt 29006341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 374
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 45887981 - 45888030
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||||||||||||||| ||||  |||||||||||||||||| ||||||    
T  45887981 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccaccta 45888030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 44909360 - 44909408
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||| ||||  |||||||||||||||| |||||||    
T  44909360 ctttcccatggtgggaaaaaacttacctttcccaaattaaacggcacct 44909408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 47331954 - 47332002
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacct 47332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 29007198 - 29007248
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||||| |||   |||||||||||||||||| |||||    
T  29007198 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatgacacct 29007248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 41224842 - 41224892
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||||| ||    ||||||||||||||||||||||||    
T  41224842 aactttcccatggtgggaaaaaataagcctttcccaaattaaatggcacct 41224892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 668420 - 668453
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcac 380  Q
    ||||| ||||||||||||||||||||||||||||    
T  668420 ggaaagaactctcctttcccaaattaaatggcac 668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 4985395 - 4985444
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||||||||||||||| ||||  | |||||||||||||||| ||||||    
T  4985395 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcaccta 4985444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 4989493 - 4989542
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||||||||||||||| ||||  | |||||||||||||||| ||||||    
T  4989493 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcaccta 4989542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 24321524 - 24321487
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaa 320  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  24321524 agagagtatgataaaaatatgttcctcatttgatctaa 24321487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 27599260 - 27599211
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27599260 aactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 27600094 - 27600143
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27600094 aactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 42607160 - 42607095
Alignment:
Q  302 tgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttccca 367  Q
    |||| ||||||| ||||||| ||||  | ||||||||||||||||||||| || || |||||||||    
T  42607160 tgtttctcatttgatctaatggacaaaaacaactttcccatggtgggaaacaattcccctttccca 42607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 33323871 - 33323915
Alignment:
Q  298 aatatgttcctcatttaatctaatagacatgatcaactttcccat 342  Q
    ||||||||||||||||||||||| |||||| ||||| ||| ||||    
T  33323871 aatatgttcctcatttaatctaacagacataatcaatttttccat 33323915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 40319652 - 40319620
Alignment:
Q  335 tttcccatggtgggaaataactctcctttccca 367  Q
    |||||||||||||||||||||||||| ||||||    
T  40319652 tttcccatggtgggaaataactctccattccca 40319620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 45887326 - 45887286
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  45887326 ctttcccatggtgggaaaaaactagcctttcccaaattaaa 45887286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 5e-63; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 217 - 379
Target Start/End: Complemental strand, 33479860 - 33479698
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    |||||||||||||||||||||| |||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33479860 atgggtgtgtggggacatgaaatagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaat 33479761  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 379  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33479760 ctaatggacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 33479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 205 - 379
Target Start/End: Complemental strand, 3542989 - 3542816
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        ||||||||||||| |||||||||||||| |||||||    
T  3542989 attatctttcacatgggtgtgtggggacatgaaagagagagtgtgaaagatagt-ttaaaaaaataatctagtggttgagagagtatgataggaatatgt 3542891  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 379  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3542890 tcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 3542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 381
Target Start/End: Complemental strand, 33018340 - 33018167
Alignment:
Q  207 tatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttc 306  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||| ||||| ||||||||||||| ||||||||||    
T  33018340 tatctttcacatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctaatggttgagagagtatgataaaaatatgttc 33018242  T
Q  307 ctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  33018241 ctcatttaatctaatggacatgatcaactttccaatgatgggaaagaactctcctttcccaaattaaatggcacc 33018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 15083203 - 15083366
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  15083203 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 15083301  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15083302 ctaatagatatgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 33480513 - 33480676
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  33480513 atgggtgtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 33480611  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33480612 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 22580098 - 22579935
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    |||||||||| |||||||||||||||| ||||||||||||||||        |||||||||| || |||||||||||||| |||||||||||||||||||    
T  22580098 atgggtgtgtagggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtgattgagagagtatgataggaatatgttcctcatttaat 22580000  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22579999 ctaatggatatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 217 - 377
Target Start/End: Original strand, 22587195 - 22587354
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||        |||||||||| || || |||||| ||||||||||||||||||||||||    
T  22587195 atgggtgtgtggggacaggaaagagagagtgtgaaagatagtataaaaaaa-taatctagtgattgagtgagtataatagaaatatgttcctcatttaat 22587293  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatgg 377  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22587294 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 3542999 - 3543111
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  3542999 taatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaa 3543098  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  3543099 attaaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 217 - 376
Target Start/End: Complemental strand, 15082560 - 15082402
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    |||||||||| |||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  15082560 atgggtgtgtagggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 15082462  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatg 376  Q
    ||||| ||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  15082461 ctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatg 15082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 269 - 374
Target Start/End: Original strand, 33018352 - 33018457
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33018352 taatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaa 33018451  T
Q  369 attaaa 374  Q
    ||||||    
T  33018452 attaaa 33018457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 382
Target Start/End: Complemental strand, 7193504 - 7193337
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    |||||||||||||||||||||||||||||||| ||      |||||||||||||||        ||||||   |||| |||||||||||||  |||||||    
T  7193504 attatctttcacatgggtgtgtggggacatgagag------tgtgaaagatagtataaaaaaa-taatct---ggttgagagagtatgataagaatatgt 7193415  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7193414 tcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 7193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 286 - 377
Target Start/End: Original strand, 22582432 - 22582523
Alignment:
Q  286 gagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatgg 377  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22582432 gagtataatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 269 - 383
Target Start/End: Original strand, 7193514 - 7193628
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| ||| ||| |||||| ||||| |||    
T  7193514 taatctagtggttgagagagtatgatagaaatatattcctcatttaatctaatggatatgatcaactttcccatgatggaaaagaactctactttctcaa 7193613  T
Q  369 attaaatggcaccta 383  Q
    |||||||||||||||    
T  7193614 attaaatggcaccta 7193628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 24126686 - 24126766
Alignment:
Q  301 atgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||| |||||||||| || ||  | |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  24126686 atgttcttcatttaatccaaaagttaagatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 24126766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 24126021 - 24125972
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  24126021 aactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||| ||||| || ||||||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 7159341 - 7159391
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  7159341 actttcccatgatgggaaaaaagtttgctttcccaaattaaatggcaccta 7159391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 15082638 - 15082672
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  15082638 ggaaagaactctcctttcccaaattaaatggcacc 15082672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 22580631 - 22580597
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  22580631 ggaaagaactctcctttcccaaattaaatggcacc 22580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 22587117 - 22587083
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  22587117 ggaaagaactctcctttcccaaattaaatggcacc 22587083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 33479938 - 33479972
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  33479938 ggaaagaactctcctttcccaaattaaatggcacc 33479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 7532440 - 7532489
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||  ||| || ||||||||||||||||||||| |||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacct 7532489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 14337557 - 14337606
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 14337606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 9574571 - 9574619
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||| ||||    
T  9574571 actttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 217 - 385
Target Start/End: Original strand, 36750323 - 36750489
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36750323 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaa--taatctagtggttgagagagtatgatagaaatatgttcctcatttaat 36750420  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacctagt 385  Q
    |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36750421 ctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacctagt 36750489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 207 - 382
Target Start/End: Original strand, 32490070 - 32490244
Alignment:
Q  207 tatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttc 306  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||    
T  32490070 tatctttcacatgggtgtgtggggacatgaaagagggagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttc 32490168  T
Q  307 ctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  32490169 ctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 32490244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 205 - 381
Target Start/End: Original strand, 19132685 - 19132860
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||        ||||| ||||||| |||||||||||||  |||||||    
T  19132685 attatctttcacatgggtgtgtggggacatgaaagagagaatgtgaaagataatataaaaaaa-taatccagtggttgagagagtatgataagaatatgt 19132783  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  19132784 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactttcctttcccaaattaaatggcacc 19132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 212
Target Start/End: Complemental strand, 47676606 - 47676400
Alignment:
Q  30 aaaatgcagtaaaatgcaacaatcttaagttgaaatgaaagtgtaaatcatcatcaaaacataaac--------------aatcatcacttaaaaagcac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||    
T  47676606 aaaatgcagtaaaatgcaacaatcttaagttgaaatgaaagtgtaaatcatcatcaaaacataaacaatctacactaagtaatcatcacttaaaaagcac 47676507  T
Q  116 taaactgaaacaatctagagttgaaataaaagtgttaatcatcgtcaacactt----------aaaatgcaacaatttaaagttaaaataattgtgtgaa 205  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||          ||||||||||||| |||||||||||||||||||| ||    
T  47676506 taaactgcaacaatctagagtggaaataaaagtgttaatcatcgtcaacatttaaaatgcagcaaaatgcaacaatctaaagttaaaataattgtgttaa 47676407  T
Q  206 ttatctt 212  Q
    |||||||    
T  47676406 ttatctt 47676400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 38923550 - 38923713
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38923550 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatagaaatatgttcctcatttaat 38923648  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||  |||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  38923649 ctaatgaacattatcaacttttccatggtgggaaagaactctcatttcccaaattaaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 45242872 - 45243035
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| |||||||||||| |||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  45242872 atgggtgtgtggggacatgaaagagagagtgtgaaagataatataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 45242970  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  45242971 ctaatagatatgatcaactttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 217 - 380
Target Start/End: Complemental strand, 38922906 - 38922744
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  38922906 atgggtgtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgtttctcatttaat 38922808  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcac 380  Q
    ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38922807 ctaatggatatgatcaactttcccatggtaggaaataactctcctttcccaaattaaatggcac 38922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 217 - 380
Target Start/End: Complemental strand, 45242229 - 45242067
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  45242229 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 45242131  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcac 380  Q
    ||||| ||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  45242130 ctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatggcac 45242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 217 - 383
Target Start/End: Complemental strand, 41755662 - 41755497
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  41755662 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatatagtggttgagagagtatgatagaaatatgttcctcatttaat 41755564  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||  |||||||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  41755563 ctaatgaacatgatcaattttctcatggtgggaaaaaactctcctttcccaaattaaatgacaccta 41755497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 217 - 383
Target Start/End: Complemental strand, 3998091 - 3997926
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3998091 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatagaaatatgttcctcatttaat 3997993  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||| || |||||||||||||||||  ||||||| |||| || ||||| |||||||||||||||||    
T  3997992 ctaatggatatgatcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcaccta 3997926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 217 - 379
Target Start/End: Complemental strand, 3971155 - 3970994
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  3971155 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatcaagtggttgagagagtatgataggaatatgttcctcatttaat 3971057  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 379  Q
    ||||| ||||||||||||||| ||||||||  ||| ||||||| |||||||||||||||||||    
T  3971056 ctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 221 - 383
Target Start/End: Original strand, 3971791 - 3971952
Alignment:
Q  221 gtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaa 320  Q
    ||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3971791 gtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaa 3971889  T
Q  321 tagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    | || |||||||||||||||||  ||||||| |||| || ||||| |||||||||||||||||    
T  3971890 tggatatgatcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcaccta 3971952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 217 - 383
Target Start/End: Complemental strand, 44686417 - 44686253
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  44686417 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgtttctcatttaat 44686319  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||| |||||||||||||||| |||||| | ||| ||||||||||| |||||||||||||||||||    
T  44686318 ctaatggacatgatcaactttctcatggt-gaaaaaaactctccttttccaaattaaatggcaccta 44686253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 41756317 - 41756481
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  41756317 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctaatggttgagagagtatgataggaatatgttcctcatttaat 41756415  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||  |||||||||||||||||||| ||||||| ||||||||||||| || ||||||| |||||    
T  41756416 ctaatgaacatgatcaactttcccatgatgggaaagaactctcctttcctaacttaaatgacacct 41756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 52492049 - 52491891
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  52492049 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatagaaatatgttccttatttaat 52491951  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||| |||     ||||| |||||||||||||||||||||||||||||    
T  52491950 ctaatggacatgatcaacttttcca-----ggaaagaactctcctttcccaaattaaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 217 - 379
Target Start/End: Original strand, 3998726 - 3998887
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| |||| |||||||||||        ||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  3998726 atgggtgtgtggggacatgaaagagagagtgtaaaagatagtataaaaaaa-taatcaagtggttgagagagtatgataggaatatgttcctcatttaat 3998824  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 379  Q
    ||||| ||||||||||||||| ||||||||  ||| ||||||| |||||||||||||||||||    
T  3998825 ctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3998887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 19132675 - 19132563
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||    
T  19132675 taatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatagtaggaaagaactctcctttcccaa 19132576  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  19132575 attaaatggcacc 19132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 275 - 381
Target Start/End: Complemental strand, 32490052 - 32489946
Alignment:
Q  275 agtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  32490052 agtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatcaactttcccatggtggaaaagaattctcctttcccaaattaaa 32489953  T
Q  375 tggcacc 381  Q
    |||||||    
T  32489952 tggcacc 32489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 227 - 382
Target Start/End: Original strand, 44687058 - 44687212
Alignment:
Q  227 ggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagaca 326  Q
    ||||||||||||||||| ||||||||||||||||        ||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||  | |    
T  44687058 ggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctaatggttgagagagtatgataggaatattttcctcatttaatctaatgaata 44687156  T
Q  327 tgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||    
T  44687157 tgatcaacttttccatggtggaaaagaattctcctttcccaaattaaatggcacct 44687212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 376
Target Start/End: Complemental strand, 36750157 - 36750050
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||  ||| | ||||||||||||||||||  |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  36750157 taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaacttttccatggtggaaaagaactctcctttcccaa 36750058  T
Q  369 attaaatg 376  Q
    ||||||||    
T  36750057 attaaatg 36750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 52492215 - 52492328
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||  ||| | |||||||||||||||||| ||||||| ||||||| ||||||||| ||| ||||||| ||||||||    
T  52492215 taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatggacatgaacaacttttccatggtggaaaagaactctcatttcccaa 52492314  T
Q  369 attaaatggcacct 382  Q
    |||||||| |||||    
T  52492315 attaaatgacacct 52492328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 382 - 457
Target Start/End: Complemental strand, 47671943 - 47671868
Alignment:
Q  382 tagtttccattccacaaatcataaaacattttcaaccaatcaagtattactcaataagtaaagaggttttaaactt 457  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  47671943 tagtttccatcccacaaatcataaaacattttcaaccaatcaagtagtacccaataagtaaagaggttttaaactt 47671868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 381
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 47676744 - 47676617
Alignment:
Q  47 aacaatcttaagttgaaatgaaagtgtaaatcatcatcaaaacat-aaacaatcatcacttaaaaagcactaaactgaaacaatctagagttgaaataaa 145  Q
    |||||||| || |||||| |||||||| ||||||||| |||| || ||||||||| ||||||||| |||  ||| |  ||||  ||| | ||||||||||    
T  47676744 aacaatctaaaattgaaaagaaagtgtgaatcatcataaaaaaattaaacaatcaacacttaaaatgcataaaaattcaacagcctaaacttgaaataaa 47676645  T
Q  146 agtgttaatcatcgtcaacacttaaaat 173  Q
    ||||| |||||||||||| || ||||||    
T  47676644 agtgtgaatcatcgtcaaaacctaaaat 47676617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 383
Target Start/End: Complemental strand, 49756324 - 49756273
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  49756324 aactttcccatggtgggaaataacattccttttccaaattaaatggcaccta 49756273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 14667345 - 14667296
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  14667345 aactttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacct 14667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 381
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  335 tttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 37105076 - 37105126
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||||| || |||| |||||||||||||| |||||||    
T  37105076 aactttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacct 37105126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 45500584 - 45500507
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgg 347  Q
    |||||||||| || ||||||||  |||  ||| |||||||||||||||||||| ||||| |||||||||||||| ||||    
T  45500584 taatctagtg-ttgagagagtagaataagaatgtgttcctcatttaatctaatggacataatcaactttcccattgtgg 45500507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 47675273 - 47675224
Alignment:
Q  124 aacaatctagagttgaaataaaagtgttaatcatcgtcaacacttaaaat 173  Q
    ||||||||| ||||||||||||||||  |||||||||||| |||||||||    
T  47675273 aacaatctaaagttgaaataaaagtgcgaatcatcgtcaaaacttaaaat 47675224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 47676453 - 47676372
Alignment:
Q  30 aaaatgcagtaaaatgcaacaatcttaagttgaaatgaaagtgtaaatcatcatcaaaacataaacaatcatcacttaaaaa 111  Q
    ||||||||| ||||||||||||||| ||||| |||| |  |||| ||| ||| |||||| ||||||||||| ||||| ||||    
T  47676453 aaaatgcagcaaaatgcaacaatctaaagttaaaataattgtgttaattatcttcaaaatataaacaatcaacactttaaaa 47676372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 49757181 - 49757230
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||| ||||| || ||||||||||||||||||| ||||||    
T  49757181 aactttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 380
Target Start/End: Original strand, 42145277 - 42145325
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcac 380  Q
    |||||||| ||||||| ||| || |||||||||||||||||||||||||    
T  42145277 aactttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 31556235 - 31556188
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||||||    
T  31556235 ctttcccatcatgggaaagaactctccttttccaaattaaatggcacc 31556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 43638078 - 43638129
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacctag 384  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacctag 43638129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 38923472 - 38923438
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  38923472 ggaaagaactctcctttcccaaattaaatggcacc 38923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 42144411 - 42144369
Alignment:
Q  339 ccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  42144411 ccatggtggaaaataacattcctttcccaaattaaatggcacc 42144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 45242307 - 45242341
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  45242307 ggaaagaactctcctttcccaaattaaatggcacc 45242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 381
Target Start/End: Original strand, 17227955 - 17227996
Alignment:
Q  340 catggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  17227955 catggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 25329431 - 25329382
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||| |||||||||| | | |||||| ||||||||||||||||    
T  25329431 actttcccatgatgggaaataagtttgctttcctaaattaaatggcacct 25329382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 38337433 - 38337518
Alignment:
Q  289 tatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    ||||||| ||||||||||   |||||||||||  | ||  || | |||||||||||||||||| ||||  ||||||||||||||||    
T  38337433 tatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaacttccctttcccaaattaaa 38337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 47675213 - 47675145
Alignment:
Q  30 aaaatgcagtaaaatgcaacaatcttaagttgaaatgaaagtgtaaatcatcatcaaaacataaacaatc 99  Q
    ||||| |||||||| ||| |||||| |||||||| ||||||||| | | ||||||||||| |||||||||    
T  47675213 aaaatacagtaaaacgcatcaatctaaagttgaa-tgaaagtgtgatttatcatcaaaacctaaacaatc 47675145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 39901894 - 39901846
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||||| ||||||| |||||||  ||||| ||||||    
T  39901894 actttcccatggtgggaaagaactctcatttcccaggttaaacggcacc 39901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 205 - 382
Target Start/End: Complemental strand, 38834562 - 38834386
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||||||| ||||||||    
T  38834562 attatctttcacatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataaaaatatgt 38834464  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  38834463 tcctcatttaatctaatggacatgatcaactttcccgtggtgggaaagtaccctcctttcccaaattaaatggcacct 38834386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 21471839 - 21472002
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  21471839 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 21471937  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21471938 ctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 217 - 383
Target Start/End: Complemental strand, 21471180 - 21471015
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||| | |||||||||||||| ||||||||| |||||||||    
T  21471180 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggctgagagagtatgataggaatatgttcttcatttaat 21471082  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21471081 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccta 21471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 217 - 382
Target Start/End: Complemental strand, 37548163 - 37547997
Alignment:
Q  217 atgggtgtgtggggacatgaaagagaggg--tgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcattta 314  Q
    ||||||||||||||||||||||||||| |  |||||||||| ||||        ||||||||||||| |||||||||||||| |||||||||||||||||    
T  37548163 atgggtgtgtggggacatgaaagagagagagtgtgaaagatggtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcattta 37548065  T
Q  315 atctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37548064 atctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 37547997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 38834572 - 38834685
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  38834572 taatctagtggttgagagagtatgatagaaatatgttcttcatttaatctaatggacatgatcaactttcccacggtaggaaaaaactctcctttcccaa 38834671  T
Q  369 attaaatggcacct 382  Q
    ||||||||||||||    
T  38834672 attaaatggcacct 38834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 13134430 - 13134318
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  13134430 taatctagtggttgatagagtatgatagaaatatgttcctcatttaatttaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaa 13134331  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  13134330 attaaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 14573372 - 14573261
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    |||||||||| || ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  14573372 taatctagtg-ttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaa 14573274  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  14573273 attaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 14573936 - 14574049
Alignment:
Q  270 aatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaa 369  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||||||| || |||||||||||||  ||||||||||| |||||||||||||||||    
T  14573936 aatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcttatggtgggaaagaactctcctttcccaaa 14574035  T
Q  370 ttaaatggcaccta 383  Q
    ||||||||||||||    
T  14574036 ttaaatggcaccta 14574049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 4479652 - 4479750
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4479652 agagagtatgataagaatatgttcctcatttaatctaatggacatgattaactttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 33433160 - 33433208
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  33433160 actttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 1164788 - 1164825
Alignment:
Q  345 tgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1164788 tgggaaagaactctcctttcccaaattaaatggcacct 1164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 5276513 - 5276464
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  5276513 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 5276464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 4478899 - 4478849
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  4478899 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcaccta 4478849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 30545434 - 30545484
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||  ||||||| ||||  ||||||||||||||||||||||||    
T  30545434 aactttcccatcatgggaaacaacttccctttcccaaattaaatggcacct 30545484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 16426602 - 16426553
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||||    
T  16426602 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 16426553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 40992271 - 40992222
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||| ||||| |||   |||||||||||||||||||||||    
T  40992271 aactttcccatggtaggaaaaaacaaacctttcccaaattaaatggcacc 40992222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 30544779 - 30544727
Alignment:
Q  329 atcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||  ||||||| ||||  | |||||||||||||||||||||    
T  30544779 atcaactttcccatcatgggaaacaacttccatttcccaaattaaatggcacc 30544727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 41984774 - 41984726
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||| |||| ||||  |||||||||||||||||| |||||    
T  41984774 ctttcccatggtgagaaaaaactagcctttcccaaattaaatgccacct 41984726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 45139738 - 45139690
Alignment:
Q  335 tttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||| ||| ||| || ||||||||||||||||||||| ||||||    
T  45139738 tttcccatgatggaaaagaagtctcctttcccaaattaaatgccaccta 45139690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 217 - 382
Target Start/End: Original strand, 44 - 209
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  44 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaat 143  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  144 ctaatgaacataatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 16270371 - 16270207
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    |||||||||| |||||||||||||| | ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  16270371 atgggtgtgtagggacatgaaagagggagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaat 16270272  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16270271 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 205 - 381
Target Start/End: Complemental strand, 43737904 - 43737729
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |        ||||||||||||| ||||||||||||| |||||| |    
T  43737904 attatctttcacatgggtgtgtggggacatcaaagagagaatgtgaaagatagtgtaaaaaaa-taatctagtggttgagagagtatgataaaaatatat 43737806  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43737805 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 217 - 383
Target Start/End: Complemental strand, 51974600 - 51974435
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    |||||||||||||||||||||||||||  |||||||||||||||        ||||||||| ||| |||||||||||||| ||||||||| |||||||||    
T  51974600 atgggtgtgtggggacatgaaagagagaatgtgaaagatagtataaaaaaa-taatctagtagttgagagagtatgataggaatatgttcttcatttaat 51974502  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51974501 ctaatagacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccta 51974435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 51975112 - 51975275
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||| |||||||||||||||||||    
T  51975112 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttaagagagtatgataggaatatgttcctcatttaat 51975210  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||    
T  51975211 ctaattgacatgatcaactttcccatagtgaaaaagaactctcctttcccaaattaaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 207 - 381
Target Start/End: Complemental strand, 23440789 - 23440617
Alignment:
Q  207 tatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttc 306  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| ||||||||     
T  23440789 tatctttcacatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaa--taatctagtggttgagagagtatgataggaatatgttt 23440692  T
Q  307 ctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||| ||||| ||||||||| |||| || ||||| |||||||||||||||||||||||||||||    
T  23440691 ctcatttaatctaatggacataatcaacttttccatagttggaaagaactctcctttcccaaattaaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 217 - 383
Target Start/End: Original strand, 48972330 - 48972495
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  48972330 atgggtgtgtggggatatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgtttctcatttaat 48972428  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  48972429 ctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggcaccta 48972495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 220 - 381
Target Start/End: Original strand, 16271036 - 16271196
Alignment:
Q  220 ggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatcta 319  Q
    |||||||||||||||||||||||| |||||||| |||||||        ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  16271036 ggtgtgtggggacatgaaagagagagtgtgaaatatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaatcta 16271134  T
Q  320 atagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    || ||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||    
T  16271135 atggacatgatcaactttcccatgatgagaaagaactctcctttcctaaattaaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 220 - 381
Target Start/End: Complemental strand, 9948155 - 9947995
Alignment:
Q  220 ggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatcta 319  Q
    |||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  9948155 ggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaatcta 9948057  T
Q  320 atagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||  | |||||||||||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  9948056 atgaatatgatcaacttttccatggtgggaaagaacttttctttcccaaattaaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 23440801 - 23440913
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  23440801 taatctagtggttgagagagtatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaa 23440900  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  23440901 attaaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 217 - 386
Target Start/End: Original strand, 38931131 - 38931300
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| |||||||||||| |||        |||| |||||||| ||||||||||||||||||||||| || |||||||    
T  38931131 atgggtgtgtggggacatgaaagagagagtgtgaaagataatataaaaaaaataatatagtggttgagagagtatgatagaaatatgtttcttatttaat 38931230  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacctagtt 386  Q
     |||| || |||||||||||||||||||| | ||| |||||| |||||||||||||||||||| ||||||    
T  38931231 ttaatggatatgatcaactttcccatggtagaaaagaactcttctttcccaaattaaatggcatctagtt 38931300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 43737914 - 43738027
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  43737914 taatctagtggttgagagaatatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaa 43738013  T
Q  369 attaaatggcacct 382  Q
    ||||||||||||||    
T  43738014 attaaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 9948823 - 9948935
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||    
T  9948823 taatctagtggttgatagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcctaa 9948922  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  9948923 attaaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 48971868 - 48971705
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||        |||| |||||||| |||||||||||||| |||||||||||||||||||    
T  48971868 atgggtgtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaa-taatatagtggttgagagagtatgataggaatatgttcctcatttaat 48971770  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||  | ||||||||||||| ||| |||||||| |||||||||||||||||||||||| ||||    
T  48971769 ctaatttatatgatcaactttctcattgtgggaaagaactctcctttcccaaattaaatgacacc 48971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 38930475 - 38930312
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  38930475 atgggtgtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttccttatttaat 38930377  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
     |||| || |||||||||||||||||||||  ||| |||| ||||||||||||||||||| ||||    
T  38930376 ttaatggatatgatcaactttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 50827027 - 50827138
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    |||| |||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||    
T  50827027 taatttagtggttgagagagtatgataaaaatatgtttctcatttaatctaatggacatgatcaactttcccatggtgggaaa-aactctcctttctcaa 50827125  T
Q  369 attaaatggcacc 381  Q
    |||||||||||||    
T  50827126 attaaatggcacc 50827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 6076753 - 6076901
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||| ||||| |||||||||||||| |||||||| ||||||||||    
T  6076753 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaa--taatctattggttgagagagtatgataggaatatgttactcatttaat 6076850  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttccca 367  Q
     |||| ||||||||||||||| |||| |||||||| ||||||| |||||||    
T  6076851 ataatggacatgatcaacttttccatagtgggaaagaactctcatttccca 6076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 283 - 381
Target Start/End: Complemental strand, 193948 - 193850
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||  ||||||||||||||||||| |||| |||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  193948 agagagtatgataagaatatgttcctcatttaatttaatggacatgattaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 27888765 - 27888701
Alignment:
Q  287 agtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaa 351  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27888765 agtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaa 27888701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 6076072 - 6075988
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttccca 367  Q
    ||||| ||||||| |||| | |||||||||||||||||| |||||||||||||||| |||||| | ||| |||||||||||||||    
T  6076072 agagactatgataaaaatgtattcctcatttaatctaatggacatgatcaactttctcatggtagaaaagaactctcctttccca 6075988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 31390713 - 31390847
Alignment:
Q  218 tgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatc 317  Q
    |||||||||||||||||||||||||| |||  ||||||||| |        ||||||| || || |||||||| |||| |||| ||||||||||||| ||    
T  31390713 tgggtgtgtggggacatgaaagagagagtg--aaagatagtgtaaaaaa--taatctaatg-ttgagagagtaggataaaaatgtgttcctcatttattc 31390807  T
Q  318 taatagacatgatcaactttcccatggtgggaaataactc 357  Q
     ||| ||||| ||||||||||||||||||||||| |||||    
T  31390808 caatggacataatcaactttcccatggtgggaaagaactc 31390847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 1012596 - 1012546
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  1012596 aactttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacct 1012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 47334310 - 47334217
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctccttt 363  Q
    |||||||||| || |||||||| ||||   || |||| ||||||||||||||| ||||| |||||||||||||| |||||||| ||||| |||||    
T  47334310 taatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaactttcccattgtgggaaacaactccccttt 47334217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 47334850 - 47334948
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||| |||| | || |||| ||||||||||| ||| ||||| ||||||||||| ||||||||||| ||||| | ||||||| | |||||| ||||    
T  47334850 agagagtaggataaagatttgttactcatttaatccaatggacataatcaactttcctatggtgggaaacaactcccttttcccatactaaatgccacc 47334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 383
Target Start/End: Original strand, 1013471 - 1013522
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||||||||||||| |||||||  ||||||||||||||||||| ||||||    
T  1013471 aactttcccatggtggaaaataacattcctttcccaaattaaatgacaccta 1013522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 35616775 - 35616824
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  35616775 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 35616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 40649536 - 40649580
Alignment:
Q  302 tgttcctcatttaatctaatagacatgatcaactttcccatggtg 346  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||    
T  40649536 tgttccacatttaatctaatggacattatcaactttcccatggtg 40649580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 16270935 - 16270901
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  16270935 ggaaagaactctcctttcccaaattaaatggcacc 16270901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 38930574 - 38930608
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  38930574 ggaaagaactctcctttcccaaattaaatggcacc 38930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 45064734 - 45064685
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||| ||||||| ||||   |||||||||||||||||||||||    
T  45064734 actttcccatgatgggaaaaaactaatctttcccaaattaaatggcacct 45064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 49611562 - 49611607
Alignment:
Q  335 tttcccatggtgggaaataactctcctttcccaaattaaatggcac 380  Q
    ||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  49611562 tttcccatgatgggaaaaaactagcctttcccaaattaaatggcac 49611607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 194701 - 194749
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  194701 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 14924721 - 14924681
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  14924721 ctttcccatggtgggaaacaacttccctttcccaaattaaa 14924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 14925343 - 14925383
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaa 374  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  14925343 ctttcccatggtgggaaacaactttccttccccaaattaaa 14925383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 37874112 - 37874064
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| ||||    
T  37874112 actttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 49610754 - 49610706
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||| |||||| || ||| ||||||||||| ||||||||||    
T  49610754 actttcccatggagggaaaaaagtcttctttcccaaataaaatggcacc 49610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 217 - 381
Target Start/End: Original strand, 15183902 - 15184065
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||        ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  15183902 atgggtgtgtggggacatgaaagagagagtgtgaaagatagcataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaat 15184000  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15184001 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 15183252 - 15183088
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15183252 atgggtgtgtggggacatgaaagtgagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgatagaaatatgttcctcatttaat 15183154  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaat-aactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  15183153 ctaatggacatgatcaactttctcatgatgggaaataaactctcctttcccaaattaaatggcacc 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 221 - 382
Target Start/End: Original strand, 33002705 - 33002865
Alignment:
Q  221 gtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaa 320  Q
    |||| |||||||||||||||||| ||||||||||||||||        ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33002705 gtgtttggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagagtatgataggaatatgttcctcatttaatctaa 33002803  T
Q  321 tagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  33002804 tggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacct 33002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 686579 - 686417
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  686579 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagagaatatgataggaatatattcctcatttaat 686481  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  686480 ctaatggacatgatcaactttcccatggtgggaaa-aactctcctttcccaaattaaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 233 - 384
Target Start/End: Complemental strand, 8204267 - 8204117
Alignment:
Q  233 atgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatca 332  Q
    ||||||||||| ||||||||||||||||        ||||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  8204267 atgaaagagagagtgtgaaagatagtataaaaaaa-taatctagtggttgagatagtatgataggaatatgttcctcatttaatctaatggacatgatca 8204169  T
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacctag 384  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8204168 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacctag 8204117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 205 - 382
Target Start/End: Complemental strand, 8040370 - 8040194
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgt 304  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||        |||| |||||||| |||||||||||||  ||||| |    
T  8040370 attatctttcacatggatgtgtagggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatgtagtggttgagagagtatgataagaatatat 8040272  T
Q  305 tcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  8040271 tcctcatttaatctaatggacatgatcaactttcccacgatgggaaagaactgtcctttcccaaattaaatggcacct 8040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 217 - 380
Target Start/End: Original strand, 687233 - 687395
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatagtatnnnnnnnntaatctagtggttaagagagtatgatagaaatatgttcctcatttaat 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        |||| ||||| || |||||||||||||| |||||||||||||||||||    
T  687233 atgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaa-taatttagtgattgagagagtatgataggaatatgttcctcatttaat 687331  T
Q  317 ctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcac 380  Q
    ||||| ||||| ||||||||| |||| |||| ||| ||||||||||||||||||||||||||||    
T  687332 ctaatggacataatcaacttttccatagtggaaaagaactctcctttcccaaattaaatggcac 687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 12190094 - 12190207
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||| || || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  12190094 taatctaatgattgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcttttcccaa 12190193  T
Q  369 attaaatggcacct 382  Q
    ||||||||||||||    
T  12190194 attaaatggcacct 12190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 8040380 - 8040493
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||||| |||||||| |||||||||| ||||||||| || | |||||||||||    
T  8040380 taatctagtggttgagagagtatgatagaaatatgttccctatttaatctaatggacatgattaactttcccacggtgggaaagaaatttcctttcccaa 8040479  T
Q  369 attaaatggcacct 382  Q
    ||||||||||||||    
T  8040480 attaaatggcacct 8040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 269 - 383
Target Start/End: Original strand, 36626566 - 36626680
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||  ||||| ||||| ||||||| |||  ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  36626566 taatctagtggttgagagagtatgataagaatatattccttatttaatataacggacatgatcaactttcccatggtgggaaagaactctcatttcccaa 36626665  T
Q  369 attaaatggcaccta 383  Q
    |||||||||||||||    
T  36626666 attaaatggcaccta 36626680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 283 - 382
Target Start/End: Complemental strand, 33002030 - 33001931
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||| |||||||  ||| | |||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  33002030 agagaatatgataagaatgtattcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 33001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 382
Target Start/End: Original strand, 33283973 - 33284072
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||||||||| |||| |||||||||||| ||||||  | ||  |  | |||||||||||||||| | ||||  ||||||||||||||||||||||||    
T  33283973 agagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaattaaatggcacct 33284072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 36626556 - 36626501
Alignment:
Q  205 attatctttcacatgggtgtgtggggacatgaaagagagggtgtgaaagatagtat 260  Q
    |||||||||||||||||| ||||| ||||||||||||||  |||||||||||||||    
T  36626556 attatctttcacatgggtatgtggagacatgaaagagagaatgtgaaagatagtat 36626501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 4608589 - 4608638
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  4608589 aactttcccatggtgggaaataacattcctttcccagattaaatggcacc 4608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 13654981 - 13654932
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| |||||    
T  13654981 actttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 39950444 - 39950480
Alignment:
Q  345 tgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39950444 tgggaaagaactctcctttcccaaattaaatggcacc 39950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 2319313 - 2319266
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  2319313 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacc 2319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 375
Target Start/End: Complemental strand, 4607513 - 4607470
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaat 375  Q
    |||||||||||||||||||| || ||| ||||||||||||||||    
T  4607513 aactttcccatggtgggaaaaaagtctactttcccaaattaaat 4607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 686667 - 686701
Alignment:
Q  347 ggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||||||||    
T  686667 ggaaagaactctcctttcccaaattaaatggcacc 686701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 375
Target Start/End: Original strand, 17767547 - 17767633
Alignment:
Q  289 tatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaat 375  Q
    ||||||| |||||||||| | | |||||||||| | |   ||| ||||||||||||||||||| |||  |||||||||| |||||||    
T  17767547 tatgataaaaatatgttctttagttaatctaatggtctaaatctactttcccatggtgggaaacaacgatcctttcccatattaaat 17767633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 2319968 - 2320017
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    |||||| ||||||||||| ||||  |||||||||||||||||| ||||||    
T  2319968 ctttcctatggtgggaaaaaactagcctttcccaaattaaatgccaccta 2320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  335 tttcccatggtgggaaataactctcctttcccaaattaaatg 376  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 13404701 - 13404753
Alignment:
Q  331 caactttcccatggtgggaaataactctcctttcccaaattaaatggcaccta 383  Q
    ||||||||||||||||||||| ||   ||| ||||||||||||||| ||||||    
T  13404701 caactttcccatggtgggaaaaaagagtccgttcccaaattaaatgccaccta 13404753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 16971033 - 16971081
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||| ||||||| ||||   ||||||||||||||||||||||    
T  16971033 actttcccatgatgggaaaaaactagtctttcccaaattaaatggcacc 16971081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 26268391 - 26268343
Alignment:
Q  334 ctttcccatggtgggaaataactctcctttcccaaattaaatggcacct 382  Q
    |||||||||||||||||| ||||  | |||||||||||||||| |||||    
T  26268391 ctttcccatggtgggaaaaaactaacatttcccaaattaaatgccacct 26268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  333 actttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 381
Target Start/End: Complemental strand, 27319 - 27221
Alignment:
Q  283 agagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27319 agagagtatgataagaatgtgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 27534 - 27623
Alignment:
Q  292 gatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  27534 gataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 27498 - 27538
Alignment:
Q  217 atgggtgtgtggggacatgaaagagagggtgtgaaagatag 257  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  27498 atgggtgtgtggggacatgaaagagagagtgtgaaagatag 27538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 9194 - 9306
Alignment:
Q  269 taatctagtggttaagagagtatgatagaaatatgttcctcatttaatctaatagacatgatcaactttcccatggtgggaaataactctcctttcccaa 368  Q
    ||||||||||||| |||||||||||||  ||||||||| |||||||||||||| |||||||| |||||| ||||||||  ||| ||||||||||| ||||    
T  9194 taatctagtggttgagagagtatgataagaatatgttcatcatttaatctaatggacatgatgaacttttccatggtgaaaaaaaactctccttttccaa 9293  T
Q  369 attaaatggcacc 381  Q
    |||||||| ||||    
T  9294 attaaatgacacc 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 17388 - 17339
Alignment:
Q  332 aactttcccatggtgggaaataactctcctttcccaaattaaatggcacc 381  Q
    |||||||||||||||||||| |||   ||||| |||||||||||||||||    
T  17388 aactttcccatggtgggaaaaaacaagccttttccaaattaaatggcacc 17339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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