View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0611_low_48 (Length: 363)

Name: NF0611_low_48
Description: NF0611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0611_low_48
NF0611_low_48
[»] chr7 (33 HSPs)
chr7 (98-199)||(27077771-27077872)
chr7 (98-199)||(27200429-27200530)
chr7 (220-282)||(36819899-36819961)
chr7 (224-282)||(37950945-37951003)
chr7 (224-282)||(47081183-47081241)
chr7 (221-279)||(31466355-31466413)
chr7 (223-282)||(28185410-28185469)
chr7 (224-282)||(36859208-36859266)
chr7 (224-282)||(42834292-42834350)
chr7 (217-274)||(34478001-34478058)
chr7 (224-279)||(4612087-4612142)
chr7 (223-282)||(32618941-32619000)
chr7 (224-279)||(48531528-48531583)
chr7 (224-282)||(10464115-10464173)
chr7 (224-282)||(42086638-42086696)
chr7 (224-277)||(23473969-23474022)
chr7 (224-279)||(19072975-19073030)
chr7 (224-279)||(47713502-47713557)
chr7 (224-282)||(2400488-2400546)
chr7 (224-282)||(37231563-37231621)
chr7 (224-277)||(35500747-35500800)
chr7 (224-279)||(36905732-36905787)
chr7 (224-279)||(47538129-47538184)
chr7 (224-277)||(24151581-24151634)
chr7 (224-279)||(31110831-31110886)
chr7 (221-258)||(19072766-19072803)
chr7 (224-261)||(36643963-36644000)
chr7 (227-279)||(21392224-21392276)
chr7 (224-259)||(2400285-2400320)
chr7 (224-259)||(28185634-28185669)
chr7 (224-259)||(36819696-36819731)
chr7 (225-259)||(31110625-31110659)
chr7 (223-259)||(47080979-47081015)
[»] chr4 (53 HSPs)
chr4 (220-282)||(28152194-28152256)
chr4 (224-282)||(3442344-3442402)
chr4 (224-282)||(5735474-5735532)
chr4 (224-282)||(47579489-47579547)
chr4 (222-282)||(20678586-20678646)
chr4 (224-282)||(26205704-26205762)
chr4 (224-282)||(46803835-46803893)
chr4 (217-282)||(49768648-49768713)
chr4 (224-279)||(7738819-7738874)
chr4 (224-282)||(3901139-3901197)
chr4 (224-282)||(28166477-28166535)
chr4 (224-282)||(45198340-45198398)
chr4 (221-282)||(21858916-21858977)
chr4 (221-282)||(21914779-21914840)
chr4 (224-279)||(4264340-4264395)
chr4 (224-279)||(18359973-18360028)
chr4 (224-279)||(36602900-36602955)
chr4 (218-292)||(1377224-1377298)
chr4 (221-279)||(3443384-3443442)
chr4 (223-279)||(5744082-5744138)
chr4 (224-279)||(4209565-4209620)
chr4 (224-279)||(39260132-39260187)
chr4 (224-279)||(55190566-55190621)
chr4 (229-279)||(5123162-5123212)
chr4 (219-277)||(6494798-6494856)
chr4 (224-282)||(25644562-25644620)
chr4 (224-282)||(37688033-37688091)
chr4 (221-279)||(46212347-46212405)
chr4 (224-279)||(19652256-19652311)
chr4 (224-279)||(23603647-23603702)
chr4 (224-282)||(6922940-6922998)
chr4 (227-277)||(19525717-19525767)
chr4 (223-279)||(19170538-19170594)
chr4 (231-279)||(42187007-42187055)
chr4 (216-259)||(4264126-4264169)
chr4 (224-279)||(40250783-40250838)
chr4 (224-263)||(50971650-50971689)
chr4 (229-279)||(19633854-19633904)
chr4 (219-259)||(46212576-46212616)
chr4 (224-259)||(3901365-3901400)
chr4 (224-259)||(5744309-5744344)
chr4 (224-259)||(10385074-10385109)
chr4 (224-279)||(39786357-39786412)
chr4 (224-259)||(46803631-46803666)
chr4 (223-282)||(47278276-47278335)
chr4 (224-259)||(47579287-47579322)
chr4 (217-259)||(3442570-3442612)
chr4 (222-259)||(6494586-6494623)
chr4 (222-259)||(39786582-39786619)
chr4 (222-259)||(40071447-40071484)
chr4 (223-267)||(8525436-8525480)
chr4 (223-259)||(23255934-23255970)
chr4 (215-259)||(45198566-45198609)
[»] chr8 (37 HSPs)
chr8 (222-282)||(23249055-23249115)
chr8 (224-282)||(30290127-30290185)
chr8 (224-290)||(45082007-45082073)
chr8 (224-282)||(2805476-2805534)
chr8 (224-282)||(29791145-29791203)
chr8 (223-282)||(14522582-14522641)
chr8 (224-282)||(43066329-43066387)
chr8 (222-279)||(2986531-2986588)
chr8 (223-279)||(3293100-3293156)
chr8 (224-279)||(8350880-8350935)
chr8 (224-282)||(18809479-18809537)
chr8 (232-282)||(39361328-39361378)
chr8 (219-279)||(30380736-30380796)
chr8 (224-279)||(6471051-6471106)
chr8 (224-282)||(31127805-31127863)
chr8 (224-277)||(12893736-12893789)
chr8 (226-279)||(38845813-38845866)
chr8 (223-279)||(13138131-13138187)
chr8 (224-279)||(37710105-37710160)
chr8 (227-279)||(40013857-40013909)
chr8 (224-259)||(40013651-40013686)
chr8 (234-279)||(6470624-6470669)
chr8 (223-259)||(1580991-1581027)
chr8 (223-259)||(29790941-29790977)
chr8 (224-259)||(29708787-29708822)
chr8 (224-259)||(30289924-30289959)
chr8 (224-259)||(37709899-37709934)
chr8 (224-279)||(38739863-38739918)
chr8 (224-259)||(38845200-38845235)
chr8 (217-259)||(13138358-13138400)
chr8 (217-259)||(14583714-14583756)
chr8 (221-259)||(38739654-38739692)
chr8 (241-279)||(45253952-45253990)
chr8 (224-279)||(1580768-1580820)
chr8 (222-259)||(45081810-45081847)
chr8 (219-259)||(2805702-2805742)
chr8 (218-282)||(3383611-3383675)
[»] chr3 (39 HSPs)
chr3 (222-282)||(8559003-8559063)
chr3 (224-282)||(7459820-7459878)
chr3 (224-282)||(18659255-18659313)
chr3 (219-282)||(37833103-37833166)
chr3 (224-282)||(52668486-52668544)
chr3 (231-282)||(1327515-1327566)
chr3 (218-279)||(38833869-38833930)
chr3 (224-279)||(29728098-29728153)
chr3 (224-279)||(34827459-34827514)
chr3 (224-279)||(54840128-54840183)
chr3 (224-275)||(10435329-10435380)
chr3 (224-279)||(10571144-10571199)
chr3 (224-279)||(21907202-21907257)
chr3 (221-275)||(27849146-27849200)
chr3 (224-282)||(32951136-32951194)
chr3 (221-279)||(51062596-51062654)
chr3 (221-279)||(53066576-53066634)
chr3 (238-282)||(43138054-43138098)
chr3 (224-279)||(45167505-45167560)
chr3 (224-279)||(48706846-48706901)
chr3 (224-282)||(4238494-4238552)
chr3 (233-274)||(38492262-38492303)
chr3 (227-279)||(47638261-47638313)
chr3 (224-279)||(32285176-32285231)
chr3 (224-279)||(46483754-46483809)
chr3 (224-274)||(17053075-17053125)
chr3 (224-277)||(3547420-3547473)
chr3 (222-259)||(29728324-29728361)
chr3 (228-277)||(36665226-36665275)
chr3 (222-279)||(49058062-49058119)
chr3 (216-259)||(21906988-21907031)
chr3 (224-275)||(28690707-28690758)
chr3 (217-259)||(38492045-38492087)
chr3 (216-258)||(39435262-39435304)
chr3 (224-257)||(52668713-52668746)
chr3 (219-259)||(7460046-7460086)
chr3 (223-259)||(37832899-37832935)
chr3 (231-275)||(48143973-48144017)
chr3 (219-279)||(54673984-54674044)
[»] chr6 (22 HSPs)
chr6 (223-282)||(20662058-20662117)
chr6 (220-279)||(18992109-18992168)
chr6 (218-279)||(30237373-30237434)
chr6 (219-277)||(8796257-8796315)
chr6 (224-282)||(24150944-24151002)
chr6 (223-279)||(22020482-22020538)
chr6 (216-279)||(31855024-31855087)
chr6 (224-282)||(25163367-25163425)
chr6 (223-279)||(25435617-25435673)
chr6 (224-264)||(29979024-29979064)
chr6 (224-279)||(16696016-16696071)
chr6 (224-279)||(643431-643486)
chr6 (224-279)||(11114771-11114826)
chr6 (224-259)||(33121542-33121577)
chr6 (219-277)||(7097868-7097926)
chr6 (222-259)||(2913123-2913160)
chr6 (222-258)||(11114563-11114599)
chr6 (224-259)||(643657-643692)
chr6 (216-259)||(29403636-29403679)
chr6 (224-286)||(13206953-13207015)
chr6 (222-259)||(31854816-31854853)
chr6 (224-280)||(33121747-33121803)
[»] chr1 (37 HSPs)
chr1 (223-282)||(50876567-50876626)
chr1 (224-282)||(25531981-25532039)
chr1 (221-279)||(30529047-30529105)
chr1 (224-282)||(39354264-39354322)
chr1 (224-282)||(42708703-42708761)
chr1 (224-282)||(48264811-48264869)
chr1 (224-282)||(52379192-52379250)
chr1 (226-282)||(48219644-48219700)
chr1 (224-282)||(3898571-3898629)
chr1 (224-282)||(16265236-16265294)
chr1 (224-282)||(16266365-16266423)
chr1 (224-282)||(26441837-26441895)
chr1 (221-279)||(29162049-29162107)
chr1 (224-282)||(43680273-43680331)
chr1 (224-279)||(1849907-1849962)
chr1 (224-279)||(32988349-32988404)
chr1 (224-279)||(38458936-38458991)
chr1 (217-279)||(49805245-49805307)
chr1 (224-277)||(4605207-4605260)
chr1 (224-272)||(45234849-45234897)
chr1 (224-279)||(37281298-37281353)
chr1 (224-279)||(50539466-50539521)
chr1 (224-282)||(24982554-24982612)
chr1 (224-279)||(23569674-23569729)
chr1 (222-259)||(48265037-48265074)
chr1 (222-259)||(50876362-50876399)
chr1 (223-259)||(25531777-25531813)
chr1 (224-259)||(30529276-30529311)
chr1 (220-259)||(41855525-41855564)
chr1 (224-259)||(48219868-48219903)
chr1 (224-278)||(32565945-32565999)
chr1 (224-253)||(28036972-28037001)
chr1 (221-250)||(44240754-44240783)
chr1 (241-277)||(14075941-14075977)
chr1 (241-277)||(16751470-16751506)
chr1 (223-259)||(32988575-32988611)
chr1 (219-259)||(52378984-52379024)
[»] chr5 (35 HSPs)
chr5 (224-282)||(35447997-35448055)
chr5 (220-282)||(38698166-38698228)
chr5 (224-282)||(42148510-42148568)
chr5 (224-282)||(23988780-23988838)
chr5 (224-279)||(5212922-5212977)
chr5 (224-279)||(32002014-32002069)
chr5 (224-279)||(39894987-39895042)
chr5 (224-282)||(4299833-4299891)
chr5 (221-279)||(5364630-5364688)
chr5 (224-282)||(22613709-22613767)
chr5 (220-278)||(35290493-35290551)
chr5 (220-278)||(39036617-39036675)
chr5 (224-279)||(32334638-32334693)
chr5 (224-282)||(970341-970399)
chr5 (224-282)||(16048288-16048346)
chr5 (229-282)||(37516348-37516401)
chr5 (223-279)||(37843574-37843630)
chr5 (224-279)||(14475230-14475285)
chr5 (224-279)||(29627474-29627529)
chr5 (224-282)||(39405967-39406025)
chr5 (224-274)||(43067432-43067482)
chr5 (222-279)||(4924836-4924893)
chr5 (223-279)||(40512679-40512735)
chr5 (223-279)||(43517059-43517115)
chr5 (223-259)||(23988578-23988614)
chr5 (224-259)||(29627268-29627303)
chr5 (220-259)||(32334866-32334905)
chr5 (224-259)||(35448223-35448258)
chr5 (218-259)||(1098401-1098442)
chr5 (224-277)||(1830863-1830916)
chr5 (218-259)||(30779971-30780012)
chr5 (224-277)||(41411157-41411210)
chr5 (224-264)||(16954841-16954881)
chr5 (216-252)||(20040451-20040487)
chr5 (223-259)||(42148306-42148342)
[»] chr2 (40 HSPs)
chr2 (224-282)||(18718442-18718500)
chr2 (224-280)||(14707535-14707591)
chr2 (226-282)||(44283281-44283337)
chr2 (224-282)||(14372280-14372338)
chr2 (224-278)||(23671583-23671637)
chr2 (224-282)||(40425249-40425307)
chr2 (223-282)||(20517621-20517680)
chr2 (224-282)||(3987232-3987290)
chr2 (224-282)||(41172757-41172815)
chr2 (230-282)||(36198957-36199009)
chr2 (224-279)||(7442891-7442946)
chr2 (231-282)||(30708931-30708982)
chr2 (223-279)||(27559781-27559837)
chr2 (223-279)||(44330590-44330646)
chr2 (224-279)||(9877083-9877138)
chr2 (224-279)||(34827118-34827173)
chr2 (216-279)||(42038729-42038792)
chr2 (223-279)||(32775902-32775958)
chr2 (224-279)||(4045233-4045288)
chr2 (221-258)||(20917726-20917763)
chr2 (224-279)||(39418020-39418075)
chr2 (224-286)||(13399105-13399167)
chr2 (221-256)||(7461668-7461703)
chr2 (224-259)||(14372077-14372112)
chr2 (224-259)||(18718239-18718274)
chr2 (224-259)||(23671376-23671411)
chr2 (224-259)||(32776126-32776161)
chr2 (224-259)||(34826912-34826947)
chr2 (224-279)||(41463517-41463572)
chr2 (216-259)||(41463743-41463786)
chr2 (223-274)||(42020202-42020253)
chr2 (230-264)||(4046070-4046104)
chr2 (221-259)||(20682868-20682906)
chr2 (224-258)||(40425476-40425510)
chr2 (230-272)||(40598342-40598384)
chr2 (224-277)||(43925074-43925127)
chr2 (227-259)||(14707760-14707792)
chr2 (219-279)||(24282955-24283015)
chr2 (223-259)||(40471962-40471998)
chr2 (219-259)||(42038518-42038558)
[»] scaffold0027 (2 HSPs)
scaffold0027 (218-282)||(117524-117588)
scaffold0027 (223-259)||(117320-117356)
[»] scaffold0092 (2 HSPs)
scaffold0092 (231-282)||(44115-44166)
scaffold0092 (224-259)||(44334-44369)
[»] scaffold0007 (1 HSPs)
scaffold0007 (224-279)||(15216-15271)
[»] scaffold0459 (2 HSPs)
scaffold0459 (232-279)||(12958-13005)
scaffold0459 (221-259)||(12749-12787)
[»] scaffold0366 (4 HSPs)
scaffold0366 (232-279)||(10599-10646)
scaffold0366 (232-279)||(14265-14312)
scaffold0366 (221-259)||(10390-10428)
scaffold0366 (221-259)||(14056-14094)
[»] scaffold0051 (2 HSPs)
scaffold0051 (224-279)||(41217-41272)
scaffold0051 (222-259)||(41443-41480)
[»] scaffold0604 (1 HSPs)
scaffold0604 (224-276)||(1317-1369)
[»] scaffold0340 (1 HSPs)
scaffold0340 (224-282)||(14541-14599)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 8e-46; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 27077872 - 27077771
Alignment:
Q  98 gaatcagctctctgtcatacacattatgttactgatccgtaccaaaatatatgctagtttaaatgtatttagtaaaacaataacaaatataacttatatc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27077872 gaatcagctctctgtcatacacattatgttactgatccgtaccaaaatgtatgctagtttaaatctatttagtaaaacaataacaaatataacttatatc 27077773  T
Q  198 ct 199  Q
    ||    
T  27077772 ct 27077771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 27200429 - 27200530
Alignment:
Q  98 gaatcagctctctgtcatacacattatgttactgatccgtaccaaaatatatgctagtttaaatgtatttagtaaaacaataacaaatataacttatatc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27200429 gaatcagctctctgtcatacacattatgttactgatccgtaccaaaatgtatgctagtttaaatctatttagtaaaacaataacaaatataacttatatc 27200528  T
Q  198 ct 199  Q
    ||    
T  27200529 ct 27200530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 36819961 - 36819899
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36819961 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 36819899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 37950945 - 37951003
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37950945 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 37951003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 47081241 - 47081183
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47081241 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 47081183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 31466355 - 31466413
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31466355 tattactccctccgtcccttaataaatgacctagttgacaatatacattattgacttga 31466413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 28185410 - 28185469
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28185410 ttactctctccgtcccttaataaatgacatagttgacaatatgcattattgacttgatat 28185469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 36859208 - 36859266
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36859208 tactccctccgtcccttaataaatgacttagttgacaatatgcattattgatttgatat 36859266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 42834292 - 42834350
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  42834292 tactccctccgtcccttaataaatgacctagtcgacaatatgcattattgatttgatat 42834350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 34478001 - 34478058
Alignment:
Q  217 aaaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattga 274  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  34478001 aaaatattactccctccgtccctcaataaatgacctagttgacaatatacattattga 34478058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 4612087 - 4612142
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  4612087 tactccctccgtcccttaataaatgacccagttgacaatatacattattgacttga 4612142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 32618941 - 32619000
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  32618941 ttactccttccgtcccttaataaatgacctaattgacaatatgcattattgactttatat 32619000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 48531583 - 48531528
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  48531583 tactccctccgtcccttaatagatgacctagttgacaatatacattattgacttga 48531528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 10464115 - 10464173
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  10464115 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 10464173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 42086638 - 42086696
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  42086638 tactccctccgtcccttaataaatgatttagttgacaatatgtattattgacttgatat 42086696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 23473969 - 23474022
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  23473969 tactccatccgtcccttaataaatgacctagttgacaatatacattattgactt 23474022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 19073030 - 19072975
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  19073030 tactccctccgtcccttaataaatgacccagttgacaatatacattattgatttga 19072975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 47713502 - 47713557
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  47713502 tactccctctgtcccttaataaatgacccagttgacaatatacattattgacttga 47713557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 2400546 - 2400488
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  2400546 tacttcctccgtcccttaataaatgatatagttgacaatatgcattattgactttatat 2400488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 37231563 - 37231621
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||    
T  37231563 tactccctccgtccctcaataaacgacctagttgacaatatacattattgacttaatat 37231621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 35500747 - 35500800
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  35500747 tactccctccgtccctcaataattgacctagttgacaatatacattattgactt 35500800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 36905787 - 36905732
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||    
T  36905787 tactccctccgtccctaaataaatgacccagttgacaatatacataattgacttga 36905732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 47538184 - 47538129
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||| |||||||    
T  47538184 tactccctccgccccttaatagatgacctagttgacaatatacattatggacttga 47538129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 24151581 - 24151634
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||||||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  24151581 tactccctccgtcccttaataggtgacctatttgacaatatacattattgactt 24151634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 31110886 - 31110831
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||| ||||||||| | |||||||||||| ||| ||||||||||    
T  31110886 tactccctccgtccctaaataaatgatccagttgacaatatacataattgacttga 31110831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 19072766 - 19072803
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttga 258  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  19072766 tattactccctccgtccctaaataaatgacctagttga 19072803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 36644000 - 36643963
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaa 261  Q
    |||||||||||||||| |||||||||||||||||||||    
T  36644000 tactccctccgtccctcaataaatgacctagttgacaa 36643963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 21392276 - 21392224
Alignment:
Q  227 tccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||| |||| |||||||||| |||||||||||||||| ||||||| ||||||    
T  21392276 tcccttcgtctcttaataaataacctagttgacaatatacattattaacttga 21392224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 2400285 - 2400320
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  2400285 tactccctccgtccctaaataaatgacctagttgac 2400320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 28185669 - 28185634
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  28185669 tactccctccgtccctaaataaatgacctagttgac 28185634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 36819696 - 36819731
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  36819696 tactccctccgtccctaaataaatgacctagttgac 36819731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 31110625 - 31110659
Alignment:
Q  225 actccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||| |||||||||||||||||||    
T  31110625 actccctccgtccctaaataaatgacctagttgac 31110659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 47080979 - 47081015
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  47080979 ttactccctccgtccctaaatgaatgacctagttgac 47081015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 28152256 - 28152194
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28152256 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 28152194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 3442344 - 3442402
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3442344 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 3442402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 5735532 - 5735474
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5735532 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 5735474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 47579547 - 47579489
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47579547 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 47579489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 20678586 - 20678646
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20678586 attacttcctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 20678646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 26205704 - 26205762
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26205704 tactccctccgtcccttaataaatgacttagttgacaatatgcattattgacttgatat 26205762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 46803893 - 46803835
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46803893 tactccctctgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 46803835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 49768713 - 49768648
Alignment:
Q  217 aaaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49768713 aaaataatacttcatccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 49768648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 7738819 - 7738874
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7738819 tactccctccgtcccttaataaatgacctagttgacaatatacattattgacttga 7738874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 3901139 - 3901197
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3901139 tacttcctccgtcccttaataaatgatctagttgacaatatgcattattgacttgatat 3901197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 28166535 - 28166477
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28166535 tacttccttcgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 28166477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 45198340 - 45198398
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  45198340 tactccctccgtcccttaataaatgacctagttgacaatatacattattgacttaatat 45198398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 21858916 - 21858977
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  21858916 tattactccatccgtcccttaataaatgatctagttgacaatatgaattattgacttgatat 21858977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 21914779 - 21914840
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  21914779 tattactccatccgtcccttaataaatgatctagttgacaatatgaattattgacttgatat 21914840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 4264395 - 4264340
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  4264395 tactccctccgtcccttaataaatgacttagttgacaatatacattattgacttga 4264340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 18359973 - 18360028
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18359973 tactccctccgtcccttaatagatgacctagttgacaatatacattattgacttga 18360028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 36602955 - 36602900
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  36602955 tactccctccgtcccttaatagatgacctagttgacaatatacattattgacttga 36602900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 1377298 - 1377224
Alignment:
Q  218 aaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatattcttcgacat 292  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||| || ||| |||||    
T  1377298 aaatattactccctctgtcccttaataaatgatccagttgacaatatacattattgacttgacatactttgacat 1377224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 3443384 - 3443442
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  3443384 tattactctctccctcccttaataaatgacctagttgacaatatacattattgacttga 3443442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 5744082 - 5744138
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  5744082 ttactccctccgtcccttaataaatgacccagttgacaatatacatttttgacttga 5744138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 4209620 - 4209565
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  4209620 tactccctccgtcccttaatagatgacctagttgacaatatacattattgatttga 4209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 39260132 - 39260187
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  39260132 tacttcctccgtcccttaatagatgacctagttgacaatatacattattgacttga 39260187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 55190566 - 55190621
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  55190566 tactccctccgtcccttaatagataacctagttgacaatatacattattgacttga 55190621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 5123162 - 5123212
Alignment:
Q  229 cctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  5123162 cctccgtcccttaatagatgacctagttgacaatatacattattgacttga 5123212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 6494856 - 6494798
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  6494856 aatactactccttccgtcccttaataaatgacccagttgacaatatacattattgactt 6494798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 25644620 - 25644562
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||    
T  25644620 tactccctccgtccttcaataaatgacctagttgacaatatacattattgacttaatat 25644562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 37688033 - 37688091
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||| |||||||    
T  37688033 tactccctccgttccttaataaatgatctagttgacaatatgtattattgatttgatat 37688091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 46212347 - 46212405
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||||||    
T  46212347 tattactccctccatcccttaataaatgactcagttgacaatatacattattgacttga 46212405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 19652256 - 19652311
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  19652256 tacttcctccgtcccttaatagatgatctagttgacaatatacattattgacttga 19652311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 23603647 - 23603702
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||    
T  23603647 tactccctccgttcctcaatagatgacctagttgacaatatacattattgacttga 23603702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 6922940 - 6922998
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||| ||| |||||||||||||||||| ||||| |||||||||||| ||||    
T  6922940 tactccctccgttcctcaataaatgacctagttgataatatacattattgacttaatat 6922998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 19525717 - 19525767
Alignment:
Q  227 tccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  19525717 tccctccgtccctcaataaatgacctagttgacaatatacatcattgactt 19525767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 19170538 - 19170594
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||||    
T  19170538 ttactccctccgtccctaaataaatgacctgtttgacaatatatattattgacttga 19170594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 42187007 - 42187055
Alignment:
Q  231 tccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  42187007 tccgtcctttaatagatgacctagttgacaatatacattattgacttga 42187055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 4264126 - 4264169
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  4264126 taaattattactccctccgtccctcaataaatgacctagttgac 4264169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 40250838 - 40250783
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| |||||||| ||||| ||||| ||||||||||||| ||||||||||||||    
T  40250838 tactccttccgtcccataatagatgacatagttgacaatatacattattgacttga 40250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 50971689 - 50971650
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaata 263  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  50971689 tactccctccgtcccttaatagatgacctagttgacaata 50971650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 19633854 - 19633904
Alignment:
Q  229 cctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||| |||| |||||||||||||||||||  |||||||||||||    
T  19633854 cctccgtccctcaatagatgacctagttgacaatatatattattgacttga 19633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 46212616 - 46212576
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  46212616 aataatactccctccgtccctaaataaatgacctagttgac 46212576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 3901400 - 3901365
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  3901400 tactccctccgtccctaaataaatgacctagttgac 3901365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 5744344 - 5744309
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  5744344 tactccctccgtccctaaataaatgacctagttgac 5744309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 10385109 - 10385074
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||||||| |||||||||||||    
T  10385109 tactccctccgtcccttaataagtgacctagttgac 10385074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 39786357 - 39786412
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||| |||||||||||| ||||| |||||||||||||  |||||||| ||||    
T  39786357 tactcccttcgtcccttaatagatgacttagttgacaatatatattattgatttga 39786412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 46803631 - 46803666
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  46803631 tactccctccgtccctaaataaatgacctagttgac 46803666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 47278276 - 47278335
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||| |||| | ||||| || || |||||||||||||||||||| ||||    
T  47278276 ttactccctccgtcctttaagagatgacttatttaacaatatgcattattgacttaatat 47278335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 47579287 - 47579322
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  47579287 tactccctccgtccctaaataaatgacctagttgac 47579322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 3442612 - 3442570
Alignment:
Q  217 aaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||| |||||||||||||||| |||||||||| ||||||||    
T  3442612 aaaatactactccctccgtccctaaataaatgacatagttgac 3442570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 6494586 - 6494623
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  6494586 attacttcctccgtccctaaataaatgacctagttgac 6494623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 39786619 - 39786582
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  39786619 attactccctccgtccctcaatagatgacctagttgac 39786582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 40071447 - 40071484
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  40071447 attactccctccgtcccttaataagtgacctatttgac 40071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 8525480 - 8525436
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgca 267  Q
    |||||||||||||||| |||||||||||||  |||| ||||||||    
T  8525480 ttactccctccgtcccataataaatgacctgtttgaaaatatgca 8525436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 23255934 - 23255970
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  23255934 ttactccctccgtccctcaatagatgacctagttgac 23255970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 45198609 - 45198566
Alignment:
Q  215 ctaaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||    
T  45198609 ctaaaatat-actccctccgtccctaaataaatgatctagttgac 45198566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 23249115 - 23249055
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23249115 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 23249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 30290185 - 30290127
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30290185 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 30290127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 45082073 - 45082007
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatattcttcgac 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  45082073 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgatttgatatacttcgac 45082007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 2805476 - 2805534
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2805476 tactccctccgtcccttaataaatgacctagttgacaatatgcatcattgacttgatat 2805534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 29791203 - 29791145
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29791203 tactccctacgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 29791145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 14522641 - 14522582
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  14522641 ttactccctccgtcccttaatagatgacctagttgacaatatacattattgacttgatat 14522582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 43066387 - 43066329
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  43066387 tactccctccgtcccttaataaatgacctagtcgacaatatacattattgacttgatat 43066329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 2986588 - 2986531
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2986588 attactccctccgtcccttaataaatgacttagttgacaatatacattattgacttga 2986531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 3293100 - 3293156
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  3293100 ttactccctccgtcccttaataaatgacccagttgacaatatacattattgacttga 3293156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 8350880 - 8350935
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  8350880 tactccctccatcccttaataaatgacctagttgacaatatacattattgacttga 8350935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 18809537 - 18809479
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  18809537 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 18809479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 39361378 - 39361328
Alignment:
Q  232 ccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39361378 ccgtcccttaataaatgacctagttgacaatatgcattattgatttgatat 39361328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 30380796 - 30380736
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  30380796 aatagtactccctccgtcccttaataaatgatccagttgacaatatacattattgacttga 30380736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 6471106 - 6471051
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6471106 tactccctctgtcccttaatagatgacctagttgacaatatacattattgacttga 6471051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 31127805 - 31127863
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||    
T  31127805 tactccctccgtccctcaataaatgacctagttgacaatatatattattgacttaatat 31127863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 12893789 - 12893736
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  12893789 tactccctccgtccctcagtaaatgacctatttgacaatatgcattattgactt 12893736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 38845866 - 38845813
Alignment:
Q  226 ctccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  38845866 ctccctccgtcccttaataaatgacccagttgacaatatacattgttgacttga 38845813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 13138131 - 13138187
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| ||||||||||||||    
T  13138131 ttactccctccgtcctttaatagatgacctagttgataatatacattattgacttga 13138187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 37710160 - 37710105
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  37710160 tactccatccgtcccttaataaatgactcagttgacaatatacattattgacttga 37710105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 40013909 - 40013857
Alignment:
Q  227 tccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||| ||||||||  |||||||||||| ||||||||||||||    
T  40013909 tccctccgtcccttagtaaatgactcagttgacaatatacattattgacttga 40013857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 40013651 - 40013686
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||||||||||||||||||||    
T  40013651 tactccctccgtcccttaataaatgacctagttgac 40013686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 6470624 - 6470669
Alignment:
Q  234 gtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  6470624 gtcccttaatagatgacctagttgacaatatacattattgatttga 6470669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 1581027 - 1580991
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1581027 ttactccctccgtccctgaataaatgacctagttgac 1580991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 29790941 - 29790977
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29790941 ttactccctccgtccctaaataaatgacctagttgac 29790977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 29708822 - 29708787
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||||||| |||||||||||||    
T  29708822 tactccctccgtcccttaataagtgacctagttgac 29708787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 30289924 - 30289959
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  30289924 tactccctccgtccctaaataaatgacctagttgac 30289959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 37709899 - 37709934
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  37709899 tactccctccgtccctaaataaatgacctagttgac 37709934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 38739918 - 38739863
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||  |||||||||||| ||||||||||||  |||||||| ||||    
T  38739918 tactccctccgtccggtaataaatgacccagttgacaatatatattattgatttga 38739863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 38845200 - 38845235
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  38845200 tactccctccgtccctaaataaatgacctagttgac 38845235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 13138400 - 13138358
Alignment:
Q  217 aaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||| |||||||||| |||||| |||||||||||||||||||    
T  13138400 aaaatgttactccctctgtccctcaataaatgacctagttgac 13138358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 14583714 - 14583756
Alignment:
Q  217 aaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||    
T  14583714 aaaatactactccctccgtcccttaatacatgacatagttgac 14583756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 38739654 - 38739692
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  38739654 tattactccctccgtccttaaataaatgacctagttgac 38739692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 45253990 - 45253952
Alignment:
Q  241 aataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  45253990 aatagatgacctagttgacaatatacattattgacttga 45253952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 1580768 - 1580820
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||| |||||||||||||||||   |||||||| ||||||||| ||||    
T  1580768 tactccctccgttccttaataaatgaccta---gacaatatacattattgagttga 1580820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 45081810 - 45081847
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  45081810 attactccctccgtccctaaataaataacctagttgac 45081847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 2805742 - 2805702
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||| |||||||||||||||| ||||||||||| |||||||    
T  2805742 aataatactccctccgtccctaaataaatgacccagttgac 2805702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 3383675 - 3383611
Alignment:
Q  218 aaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||| |||||| |||||||||||||| ||||  || ||||||||||  ||||||||||| ||||    
T  3383675 aaatagtactccttccgtcccttaatagatgatatatttgacaatatatattattgacttaatat 3383611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 8559003 - 8559063
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8559003 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 8559063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 7459820 - 7459878
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7459820 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 7459878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 18659313 - 18659255
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18659313 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 18659255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 37833166 - 37833103
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37833166 aataatactccctccgtcccttaataaatgacctagttaacaatatgcattattgacttgatat 37833103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 52668486 - 52668544
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52668486 tactccctccgtcccttaataaatcacctagttgacaatatgcattattgacttgatat 52668544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 1327566 - 1327515
Alignment:
Q  231 tccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1327566 tccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 1327515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 38833930 - 38833869
Alignment:
Q  218 aaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  38833930 aaataatactccctccgtcccttaataaatgacccagttgacaatatacattattgacttga 38833869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 29728098 - 29728153
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  29728098 tactccctccgtcccttaataaatgatctagttgacaatatacattattgacttga 29728153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 34827514 - 34827459
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  34827514 tactccctccgtcccttaataaatgacctagttgacaatatatattattgacttga 34827459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 54840128 - 54840183
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  54840128 tactccctccgtcccttaataaatgacccagttgacaatatacattattgacttga 54840183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 10435380 - 10435329
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgac 275  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  10435380 tactccctccgtccctcaataaatgacctagttgacaatatacattattgac 10435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 10571144 - 10571199
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  10571144 tactccctccgtcccttaataaataacccagttgacaatatacattattgacttga 10571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 21907257 - 21907202
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  21907257 tactccctccgtcccttaataaatgactcagttgacaatatacattattgacttga 21907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 27849200 - 27849146
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgac 275  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  27849200 tattactccttccgtcccttaatagatgacctagttgacaatatacattattgac 27849146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 32951136 - 32951194
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||    
T  32951136 tactccctccgtccctcaataaatgatctagttgacaatatacattattgacttaatat 32951194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 51062654 - 51062596
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||    
T  51062654 tattactccctccgtcccttaataaatgactcagttgataatatacattattgacttga 51062596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 53066634 - 53066576
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  53066634 tattactccctccgtcccttaatagatgatctagttgacaatatatattattgacttga 53066576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 43138098 - 43138054
Alignment:
Q  238 cttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  43138098 cttaataaatgacttagttgacaatatgcattattgacttgatat 43138054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 45167560 - 45167505
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||    
T  45167560 tactccctccgtcccttaatatatgatccagttgacaatatacattattgacttga 45167505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 48706846 - 48706901
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||| | ||||||||||||  |||||||||||||    
T  48706846 tactccctccgtcccttaataaatgatccagttgacaatatatattattgacttga 48706901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 4238494 - 4238552
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||| |||| ||||    
T  4238494 tactccctccgtccctcaataaatgacttagttgacaatatacattattaacttaatat 4238552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 38492303 - 38492262
Alignment:
Q  233 cgtcccttaataaatgacctagttgacaatatgcattattga 274  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  38492303 cgtcccttaataaatgacctagttgacaatatacattattga 38492262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 47638313 - 47638261
Alignment:
Q  227 tccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||| ||||    
T  47638313 tccctccgtcccttaatagatgacctaattgacaatatacattattgatttga 47638261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 32285176 - 32285231
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| ||||| |||||||| ||| ||||||||||||||| ||||||||||||||    
T  32285176 tactccatccgttccttaatagatggcctagttgacaatatacattattgacttga 32285231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 46483809 - 46483754
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||||||||| ||||    
T  46483809 tactccctctgtcccttaatagatgatctagttgacaatatacattattgatttga 46483754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 17053125 - 17053075
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattga 274  Q
    ||||| |||||||||| ||||||||||| |||||||||||| |||||||||    
T  17053125 tactctctccgtccctcaataaatgacccagttgacaatatacattattga 17053075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 3547420 - 3547473
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||||| ||||||| |||| |||||||| |||||||||| ||||||||||||    
T  3547420 tactcccttcgtccctcaatagatgacctatttgacaatatacattattgactt 3547473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 29728361 - 29728324
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29728361 attactccctccgtccctcaataaatgacctagttgac 29728324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 36665275 - 36665226
Alignment:
Q  228 ccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||| ||||    
T  36665275 ccctccgtcccttaatagatgacctatttgacaatatacattattaactt 36665226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 49058119 - 49058062
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||| |||| |||||||  ||||||||||  |||||||||||||    
T  49058119 attactccctccgtccctaaatagatgacctctttgacaatatatattattgacttga 49058062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 21906988 - 21907031
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||    
T  21906988 taaattattactccctccgtccctcaataaatgatctagttgac 21907031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 28690758 - 28690707
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgac 275  Q
    |||||||||||||||| |||| |||||||| ||||||||||  |||||||||    
T  28690758 tactccctccgtccctcaatagatgacctatttgacaatatatattattgac 28690707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 38492045 - 38492087
Alignment:
Q  217 aaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||| |||||||||||||||| ||||| |||||||||||||    
T  38492045 aaaatagtactccctccgtccctgaataagtgacctagttgac 38492087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 39435304 - 39435262
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacctagttga 258  Q
    |||||| ||||||||||||||||||| || |||||||||||||    
T  39435304 taaaattttactccctccgtcccttattagatgacctagttga 39435262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 52668746 - 52668713
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttg 257  Q
    |||||||||||||||| |||||||||||||||||    
T  52668746 tactccctccgtccctaaataaatgacctagttg 52668713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 7460086 - 7460046
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||| |||| ||||||||||| |||||||||||||||||||    
T  7460086 aatactacttcctccgtccctaaataaatgacctagttgac 7460046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 37832899 - 37832935
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  37832899 ttactccctccgtccctaaataaatgacatagttgac 37832935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 48144017 - 48143973
Alignment:
Q  231 tccgtcccttaataaatgacctagttgacaatatgcattattgac 275  Q
    ||||||||| ||||||||||||| ||||||||||  |||||||||    
T  48144017 tccgtccctcaataaatgacctatttgacaatatatattattgac 48143973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 54674044 - 54673984
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||| |||||||||||||||| ||||||||| ||  ||||||||||  |||||||| ||||    
T  54674044 aataatactccctccgtccctaaataaatgatctgtttgacaatatatattattgatttga 54673984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 20662058 - 20662117
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20662058 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 20662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 18992168 - 18992109
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18992168 atattactcgctccgtcccttaataaatgacctagttgacaatatacattattgacttga 18992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 30237434 - 30237373
Alignment:
Q  218 aaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  30237434 aaatattactcccttcgtcccttaataaatgacatagttgacaatatacattattgacttga 30237373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 8796315 - 8796257
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  8796315 aataatactccctccgtcccttaataaatgacccagttgacaatatacattattgactt 8796257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 24151002 - 24150944
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  24151002 tactccctccgtcccttaataaataatttagttgacaatatgcattattgacttgatat 24150944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 22020538 - 22020482
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  22020538 ttactccctccgtcccttattaaatgacccagttgacaatatacattattgacttga 22020482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 31855087 - 31855024
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||||| | ||||||||||||    
T  31855087 taaaataatactccctccgtcccttaataaatgactcagttgacaatatacgttattgacttga 31855024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 25163425 - 25163367
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||    
T  25163425 tactccctccgtccctcaataaatgacatagttgacaatatacattattgacttaatat 25163367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 25435673 - 25435617
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  25435673 ttactctctccgtcccttaataaatgacccagttgacaatatacattattgatttga 25435617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 29979024 - 29979064
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatat 264  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29979024 tactccctccgtcccttaataaatgacctagttgacaatat 29979064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 16696016 - 16696071
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||    
T  16696016 tactccctccgtccctcaatagatgacctagttgacaatatacatcattgacttga 16696071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 643431 - 643486
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||| ||||||||||    
T  643431 tactccctccgtccctaaataaatgactcagttgacaatatacataattgacttga 643486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 11114826 - 11114771
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||| |||||||||||| | |||||||||||| ||||||||| ||||    
T  11114826 tactccctccgtctcttaataaatgatccagttgacaatatacattattgatttga 11114771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 33121542 - 33121577
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||||||||||||||||||||    
T  33121542 tactccctccgtcccttaataaatgacctagttgac 33121577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 7097868 - 7097926
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||| ||||||||||||||||||||||||||   ||||||||||||  |||||||||||    
T  7097868 aataatactccctccgtcccttaataaatgattcagttgacaatatagattattgactt 7097926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 2913160 - 2913123
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2913160 attactccctccgtcccttaataagtgacctagttgac 2913123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 11114563 - 11114599
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttga 258  Q
    |||||||||||||||||| ||||||||||||||||||    
T  11114563 attactccctccgtccctcaataaatgacctagttga 11114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 643692 - 643657
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  643692 tactccctccgtccctaaataaatgacctagttgac 643657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 29403636 - 29403679
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||    
T  29403636 taaaatattactctctccgtcctttaataaatgacttagttgac 29403679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 13206953 - 13207015
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatattctt 286  Q
    ||||||||||||| || |||| |||||||| |||||||||| | |||||||||| | ||||||    
T  13206953 tactccctccgtcactcaatagatgacctatttgacaatatactttattgacttaacattctt 13207015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 31854816 - 31854853
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  31854816 attactccctccgtccctaaataaatgacccagttgac 31854853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 33121803 - 33121747
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgat 280  Q
    ||||||||| |||||| ||||||||| ||  ||||||||||  ||||||||||||||    
T  33121803 tactccctctgtccctaaataaatgatctgtttgacaatatatattattgacttgat 33121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 50876626 - 50876567
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50876626 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 50876567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 25532039 - 25531981
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25532039 tactccctccgtcccttaataaatgacctagttgacaatatacattattgacttgatat 25531981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 30529047 - 30529105
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30529047 tattactccctccgtcccttaataaatgacctagttgacaatatacattattgacttga 30529105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 39354264 - 39354322
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39354264 tactccctccgtcccttaataaatgacctagttgacagtatgcattattgacttgatat 39354322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 42708761 - 42708703
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42708761 tactccatccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 42708703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 48264811 - 48264869
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48264811 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgagttgatat 48264869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 52379250 - 52379192
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52379250 tactccctccgtcctttaataaatgacctagttgacaatatgcattattgacttgatat 52379192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 48219644 - 48219700
Alignment:
Q  226 ctccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48219644 ctccttccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 48219700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 3898571 - 3898629
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  3898571 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 3898629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 16265294 - 16265236
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  16265294 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 16265236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 16266423 - 16266365
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  16266423 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 16266365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 26441895 - 26441837
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  26441895 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 26441837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 29162107 - 29162049
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  29162107 tattactccctccgtcccttaataaacgatctagttgacaatatacattattgacttga 29162049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 43680331 - 43680273
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  43680331 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 43680273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 1849962 - 1849907
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  1849962 tactccatccgtcccttaataaatgacccagttgacaatatacattattgacttga 1849907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 32988349 - 32988404
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  32988349 tactccctccgtcccttaataaatgatccagttgacaatatacattattgacttga 32988404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 38458991 - 38458936
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  38458991 tactccctccatcccttaataaatgacccagttgacaatatacattattgacttga 38458936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 279
Target Start/End: Original strand, 49805245 - 49805307
Alignment:
Q  217 aaaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||    
T  49805245 aaaatgttactccctccgttccttaataaatgacccagttgacaatatacattgttgacttga 49805307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 4605260 - 4605207
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  4605260 tactccctccgtcccttaatagatgacctatttgacaatatacattattgactt 4605207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 45234849 - 45234897
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattatt 272  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  45234849 tactccctccgtctcttaataaatgacctagttgacaatatacattatt 45234897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 37281353 - 37281298
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  37281353 tactccctccgtcccttaatagatgatctagttgacaatatatattattgacttga 37281298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 50539521 - 50539466
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||    
T  50539521 tactccctccgtcccttaataaatgactcagttgacaatatacataattgacttga 50539466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 24982612 - 24982554
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||| |||||||||||  ||||||||||| ||||    
T  24982612 tactccctccgtccctcaataaatgaccttgttgacaatatatattattgacttaatat 24982554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 23569674 - 23569729
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||| ||||||||||||  ||||||||||  |||||||||||||    
T  23569674 tactccctccgtccctaaataaatgacctgtttgacaatatatattattgacttga 23569729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 48265074 - 48265037
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| |||||||||||||||||||    
T  48265074 attactccctccgtccctaaataaatgacctagttgac 48265037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 50876362 - 50876399
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| |||||||||||||||||||    
T  50876362 attactccctccgtccctaaataaatgacctagttgac 50876399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 25531777 - 25531813
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25531777 ttactccctccgtccctaaataaatgacctagttgac 25531813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 30529311 - 30529276
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  30529311 tactccctccgtccctcaataaatgacctagttgac 30529276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 41855525 - 41855564
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  41855525 atattactccctccgtcccttaataaatgacacagttgac 41855564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 48219903 - 48219868
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  48219903 tactccctccgtccctaaataaatgacctagttgac 48219868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 32565999 - 32565945
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttg 278  Q
    ||||||||| || |||||||| | || |||||||||||||||||||||| |||||    
T  32565999 tactccctcagttccttaatagacgatctagttgacaatatgcattattaacttg 32565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 28037001 - 28036972
Alignment:
Q  224 tactccctccgtcccttaataaatgaccta 253  Q
    ||||||||||||||||||||||||||||||    
T  28037001 tactccctccgtcccttaataaatgaccta 28036972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 44240783 - 44240754
Alignment:
Q  221 tattactccctccgtcccttaataaatgac 250  Q
    ||||||||||||||||||||||||||||||    
T  44240783 tattactccctccgtcccttaataaatgac 44240754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 14075977 - 14075941
Alignment:
Q  241 aataaatgacctagttgacaatatgcattattgactt 277  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  14075977 aatacatgacctagttgacaatatacattattgactt 14075941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 16751470 - 16751506
Alignment:
Q  241 aataaatgacctagttgacaatatgcattattgactt 277  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  16751470 aatacatgacctagttgacaatatacattattgactt 16751506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 32988611 - 32988575
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||| || |||||||||||||||||||    
T  32988611 ttactccctccgtctctaaataaatgacctagttgac 32988575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 52378984 - 52379024
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||| |||||||||||||||| ||||||||| |||||||||    
T  52378984 aatactactccctccgtccctaaataaatgatctagttgac 52379024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 35447997 - 35448055
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35447997 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 35448055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 38698228 - 38698166
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38698228 atattactccctccgtcccttaataaatgacttagttgacaatatgcattattgacttgatat 38698166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 42148568 - 42148510
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42148568 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 42148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 23988838 - 23988780
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23988838 tactccatccgtcccttaataaatgacttagttgacaatatgcattattgacttgatat 23988780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 5212922 - 5212977
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  5212922 tactccctccgtctcttaataaatgacctagttgacaatatacattattgacttga 5212977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 32002014 - 32002069
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  32002014 tactccctccgtcccttaataaatgacccagttgacaatatacattattgacttga 32002069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 39895042 - 39894987
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  39895042 tactccctccgtcccttaataaatgacccagttgacaatatacattattgacttga 39894987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 4299833 - 4299891
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  4299833 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 4299891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 5364688 - 5364630
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  5364688 tattactctctccgtcccttaataaatgacccagttgacaatatacattattgacttga 5364630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 22613709 - 22613767
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  22613709 tactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 22613767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 35290551 - 35290493
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttg 278  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  35290551 atattacttcctccgtcccttaatagatgacctagttgacaatatacattattgacttg 35290493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 39036675 - 39036617
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttg 278  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  39036675 atattattccctccgtcccttaatagatgacctagttgacaatatacattattgacttg 39036617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 32334638 - 32334693
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  32334638 tactccctccgtcccttaataaatgacccagttgacaatatacattattgatttga 32334693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 970399 - 970341
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||    
T  970399 tactccctccgtccctcaataaatgacctagttgacaatatacattattaacttaatat 970341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 16048346 - 16048288
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  16048346 tactccgtccgtccctcaataaatgacctagttgacaatatacattattgacttaatat 16048288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 37516401 - 37516348
Alignment:
Q  229 cctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  37516401 cctccgtcccttaatagataacctagttgacaatatacattattgacttgatat 37516348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 37843574 - 37843630
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||| |||| |||||||| |||||||||| ||||||||||||||    
T  37843574 ttactccctccgtccctcaatagatgacctacttgacaatatacattattgacttga 37843630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 14475230 - 14475285
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||    
T  14475230 tactccctccgtccttcaatagatgacctagttgacaatatacattattgacttga 14475285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 29627529 - 29627474
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||    
T  29627529 tactccctccgtccctaaataaatgacccagttgacaatatacataattgacttga 29627474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 39406025 - 39405967
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| ||| ||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  39406025 tactccatccttccctcaataaatgacctagttgacaatatacattattgacttaatat 39405967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 43067482 - 43067432
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattga 274  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  43067482 tactccatccgtccctcaataaatgacctagttgacaatatacattattga 43067432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 4924836 - 4924893
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| |||||||||||||||| |||||||| ||||||||||  |||||||||||||    
T  4924836 attacttcctccgtcccttaatagatgacctaattgacaatatatattattgacttga 4924893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 40512679 - 40512735
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| |||||||||||||||||||||  |||||||||||| ||||||||| ||||    
T  40512679 ttactctctccgtcccttaataaatgactcagttgacaatatacattattgatttga 40512735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 43517059 - 43517115
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||| |||||||||||||||| ||||| |||||||||||||  |||||||||||||    
T  43517059 ttacttcctccgtcccttaatagatgacttagttgacaatatatattattgacttga 43517115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 23988578 - 23988614
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| |||||||||||||||||||    
T  23988578 ttactccctccgtccctaaataaatgacctagttgac 23988614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 29627268 - 29627303
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  29627268 tactccctccgtccctaaataaatgacctagttgac 29627303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 32334905 - 32334866
Alignment:
Q  220 atattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  32334905 atattactccctctgtccctaaataaatgacctagttgac 32334866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 35448258 - 35448223
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  35448258 tactccctccgtccctaaataaatgacctagttgac 35448223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 1098442 - 1098401
Alignment:
Q  218 aaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||| |||||||||||||| || |||||||||||||    
T  1098442 aaatattacttcctccgtcccttaacaagtgacctagttgac 1098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 1830916 - 1830863
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||| ||||||||| |||||||||| || ||||||||||  |||||||||||    
T  1830916 tactccatccgtccctaaataaatgacgtatttgacaatatatattattgactt 1830863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 30780012 - 30779971
Alignment:
Q  218 aaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| ||| |||| ||||||||||||||    
T  30780012 aaatattactccctccgttcctcaatagatgacctagttgac 30779971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 41411157 - 41411210
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||| ||||||||| |||||||||| || ||||||||||  |||||||||||    
T  41411157 tactccatccgtccctaaataaatgacgtatttgacaatatatattattgactt 41411210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 16954881 - 16954841
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatat 264  Q
    ||||||||||||| ||||||| ||||| |||||||||||||    
T  16954881 tactccctccgtctcttaatagatgacttagttgacaatat 16954841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 20040487 - 20040451
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacct 252  Q
    |||||| |||||||||||||||| |||||||||||||    
T  20040487 taaaatcttactccctccgtcccgtaataaatgacct 20040451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 42148306 - 42148342
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  42148306 ttactccctccgtccctaaataaatgatctagttgac 42148342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 18718500 - 18718442
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18718500 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 18718442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 14707535 - 14707591
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgat 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14707535 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgat 14707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 44283281 - 44283337
Alignment:
Q  226 ctccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44283281 ctccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 44283337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 14372338 - 14372280
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14372338 tactccctccgtcccttaataaatgacctaattgacaatatgcattattgacttgatat 14372280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 23671637 - 23671583
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23671637 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttg 23671583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 40425249 - 40425307
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40425249 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgatttgatat 40425307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 20517680 - 20517621
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  20517680 ttactccctccgttccttaataaatgacttagttgacaatatgcattattgacttgatat 20517621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 3987232 - 3987290
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  3987232 tactccctccgtcccttaataaatgacttagttgacaatatgcattattaacttgatat 3987290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 41172757 - 41172815
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41172757 tactccccccgtcccttaataaatgatctagttgacaatatgcattattgacttgatat 41172815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 36198957 - 36199009
Alignment:
Q  230 ctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36198957 ctccgtcccttaataaatgacctagttgacaatatgcattattgatttgatat 36199009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 7442891 - 7442946
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  7442891 tactccctccgtcccttaataaatgatctagttgacaatatacattattgacttga 7442946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 30708982 - 30708931
Alignment:
Q  231 tccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30708982 tccgtcccttaataaatgacctagttgacaatatacattattgacttgatat 30708931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 27559837 - 27559781
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  27559837 ttactccctccgtcccttaataaatgacccagttgacaatatacatttttgacttga 27559781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 44330646 - 44330590
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  44330646 ttactccctccgtcccttattaaatgacccagttgacaatatacattattgacttga 44330590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 9877083 - 9877138
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  9877083 tactccctccgtcccttaatagatgacctaattgacaatatacattattgacttga 9877138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 34827173 - 34827118
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  34827173 tactccctccgtcccttaataaatgacccagttgacaatatatattattgacttga 34827118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 42038792 - 42038729
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||| |||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||    
T  42038792 taaattattactccctccgtcccttaataaatgattcagttgacaatatacattattgacttga 42038729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 32775902 - 32775958
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||    
T  32775902 ttactccctccgtccctcaatagatgacccagttgacaatatacattattgacttga 32775958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 4045233 - 4045288
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||||||||||| | |||||||||| |||| |||||||||    
T  4045233 tactccctccgtcccttaataaatgacccatttgacaatatacattgttgacttga 4045288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 20917726 - 20917763
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttga 258  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20917726 tattactccctccgtcccttaataaatgacctagttga 20917763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 39418020 - 39418075
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||| ||||||  ||||| ||||||||||||| ||||||||||||||    
T  39418020 tactccctccgtctcttaatggatgacttagttgacaatatacattattgacttga 39418075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 13399105 - 13399167
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatattctt 286  Q
    ||||||| |||||||| |||| |||| |||||||||||||| |||||||||||| | ||||||    
T  13399105 tactccccccgtccctcaatagatgatctagttgacaatatacattattgacttaacattctt 13399167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 256
Target Start/End: Original strand, 7461668 - 7461703
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagtt 256  Q
    ||||||||||||||||||||||||||| ||||||||    
T  7461668 tattactccctccgtcccttaataaataacctagtt 7461703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 14372077 - 14372112
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  14372077 tactccctccgtccctaaataaatgacctagttgac 14372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 18718239 - 18718274
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  18718239 tactccctccgtccctaaataaatgacctagttgac 18718274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 23671376 - 23671411
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  23671376 tactccctccgtccctaaataaatgacctagttgac 23671411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 32776161 - 32776126
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||||| ||||||||||||||    
T  32776161 tactccctccgtcccttaatagatgacctagttgac 32776126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 34826912 - 34826947
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  34826912 tactccctccgtccctaaataaatgacctagttgac 34826947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 41463517 - 41463572
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||| |||||| || ||||||||| |||||||||||||| ||||||||| ||||    
T  41463517 tactccttccgtctctcaataaatgatctagttgacaatatacattattgatttga 41463572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 41463786 - 41463743
Alignment:
Q  216 taaaatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||  ||||||||||||||| |||||||||||||||||||    
T  41463786 taaaatagcactccctccgtccctcaataaatgacctagttgac 41463743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 42020202 - 42020253
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattga 274  Q
    ||||||||||||||||| |||| || ||||| |||||||||| |||||||||    
T  42020202 ttactccctccgtccctcaatagataacctatttgacaatatacattattga 42020253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Complemental strand, 4046104 - 4046070
Alignment:
Q  230 ctccgtcccttaataaatgacctagttgacaatat 264  Q
    ||||||||||||||| |||||||||||||||||||    
T  4046104 ctccgtcccttaatagatgacctagttgacaatat 4046070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 20682906 - 20682868
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  20682906 tattactccctccgtcccttaataaatgacacagttgac 20682868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 40425510 - 40425476
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttga 258  Q
    |||||||||||||||| ||||||||||||||||||    
T  40425510 tactccctccgtccctaaataaatgacctagttga 40425476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 40598384 - 40598342
Alignment:
Q  230 ctccgtcccttaataaatgacctagttgacaatatgcattatt 272  Q
    |||| ||||| |||||||||||||||||||||||| |||||||    
T  40598384 ctccctccctcaataaatgacctagttgacaatatacattatt 40598342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 43925074 - 43925127
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgactt 277  Q
    |||||||||||||||| |||| | |||||| |||| ||||| ||||||||||||    
T  43925074 tactccctccgtccctcaatagacgacctatttgataatatacattattgactt 43925127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 14707792 - 14707760
Alignment:
Q  227 tccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||| |||||||||||||||||||    
T  14707792 tccctccgtccctaaataaatgacctagttgac 14707760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 24282955 - 24283015
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||| |||||| ||||||||| |||| |||| ||||||||||||||  |||||||| ||||    
T  24282955 aatactactccttccgtccctcaatagatgatctagttgacaatatatattattgatttga 24283015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 40471998 - 40471962
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||||||||||||  |||||||    
T  40471998 ttactccctccgtcccttaataaatgacacagttgac 40471962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 42038518 - 42038558
Alignment:
Q  219 aatattactccctccgtcccttaataaatgacctagttgac 259  Q
    |||| |||||||||||||||| ||||| |||||||||||||    
T  42038518 aataatactccctccgtccctaaataagtgacctagttgac 42038558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 117588 - 117524
Alignment:
Q  218 aaatattactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  117588 aaataatattccctccgtcccttaataaatgacctagttgacaatatgtattattgacttgatat 117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 117320 - 117356
Alignment:
Q  223 ttactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  117320 ttactccctccgtccctaaataaatgatctagttgac 117356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 44115 - 44166
Alignment:
Q  231 tccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44115 tccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 44166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 44369 - 44334
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||| |||||||||||||||||||    
T  44369 tactccctccgtccctaaataaatgacctagttgac 44334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 15216 - 15271
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15216 tactccctccgtcccttaataaatgacctagttgacaatatacattattgacttga 15271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 13005 - 12958
Alignment:
Q  232 ccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  13005 ccgtcccttaataaatgacccagttgacaatatacattattgacttga 12958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 12749 - 12787
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  12749 tattactccctccgtccctaaataagtgacctagttgac 12787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 10646 - 10599
Alignment:
Q  232 ccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  10646 ccgtcccttaataaatgacccagttgacaatatacattattgacttga 10599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 14312 - 14265
Alignment:
Q  232 ccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14312 ccgtcccttaataaatgacccagttgacaatatacattattgacttga 14265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 10390 - 10428
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  10390 tattactccctccgtccctaaataagtgacctagttgac 10428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 14056 - 14094
Alignment:
Q  221 tattactccctccgtcccttaataaatgacctagttgac 259  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  14056 tattactccctccgtccctaaataagtgacctagttgac 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 41217 - 41272
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttga 279  Q
    ||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  41217 tactccctccgtctcttaataaatgacttagttgacaatatacgttattgacttga 41272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 41480 - 41443
Alignment:
Q  222 attactccctccgtcccttaataaatgacctagttgac 259  Q
    |||||||||||||||||| |||||||||||||||||||    
T  41480 attactccctccgtccctcaataaatgacctagttgac 41443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 1369 - 1317
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 276  Q
    |||||||||||||| | |||| ||||||||||||||||||| |||||||||||    
T  1369 tactccctccgtccgtcaatagatgacctagttgacaatatacattattgact 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 14599 - 14541
Alignment:
Q  224 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatat 282  Q
    |||||| ||||||||  |||| ||||||||||||||||||| ||||||||| |||||||    
T  14599 tactccatccgtcccacaatagatgacctagttgacaatatacattattgatttgatat 14541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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