View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0612_low_19 (Length: 256)
Name: NF0612_low_19
Description: NF0612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0612_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 877723 - 877541
Alignment:
| Q |
14 |
agagtgatgggagagagagtattatggaaaaattgaagtaatcgtgaggctagaatttgatcttaaagggaaaaaggatcttggctattgatttggagtt |
113 |
Q |
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| T |
877723 |
agagtgatgggagagagagtattatggaaaaattgaagtaatcgtgaggctagaatttgatcttaaagggaaaaaggatcttggctattgatttggagtt |
877624 |
T |
|
| Q |
114 |
tataatttctttatgattttgccggcactctcttttcttaaatgaagagataaacatcactaaaattcacatacacaatttcc |
196 |
Q |
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| T |
877623 |
tataatttctttatgattttgccggcactctcttttcttaaatgaagagataaacatcactataattcacatacacaatttcc |
877541 |
T |
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