View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0613_low_15 (Length: 324)

Name: NF0613_low_15
Description: NF0613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0613_low_15
NF0613_low_15
[»] chr8 (52 HSPs)
chr8 (4-138)||(26242321-26242455)
chr8 (4-138)||(8609794-8609928)
chr8 (4-138)||(13282481-13282615)
chr8 (4-138)||(7745119-7745253)
chr8 (4-143)||(41042591-41042730)
chr8 (4-138)||(42941777-42941911)
chr8 (5-138)||(41825652-41825785)
chr8 (4-138)||(38547231-38547365)
chr8 (4-138)||(22272337-22272473)
chr8 (4-119)||(13108343-13108458)
chr8 (5-119)||(13486107-13486221)
chr8 (4-119)||(9673172-9673287)
chr8 (9-138)||(27691157-27691286)
chr8 (19-138)||(5036448-5036567)
chr8 (60-138)||(26238729-26238807)
chr8 (60-138)||(34681074-34681152)
chr8 (52-138)||(42943426-42943512)
chr8 (5-77)||(40339688-40339760)
chr8 (52-138)||(33761072-33761158)
chr8 (60-138)||(43262145-43262223)
chr8 (19-95)||(31821464-31821540)
chr8 (30-119)||(5075390-5075479)
chr8 (52-144)||(9671974-9672066)
chr8 (7-95)||(33708814-33708902)
chr8 (22-101)||(31201148-31201227)
chr8 (60-119)||(41823912-41823971)
chr8 (52-138)||(29239187-29239273)
chr8 (19-85)||(37526025-37526091)
chr8 (19-101)||(42897776-42897858)
chr8 (52-153)||(601704-601805)
chr8 (4-101)||(40020622-40020719)
chr8 (19-119)||(9184405-9184505)
chr8 (59-131)||(9186654-9186726)
chr8 (52-119)||(22273891-22273958)
chr8 (73-119)||(13484567-13484613)
chr8 (19-77)||(15305861-15305919)
chr8 (19-77)||(15486230-15486288)
chr8 (52-138)||(27692837-27692923)
chr8 (19-101)||(33750386-33750468)
chr8 (52-138)||(33762713-33762799)
chr8 (52-138)||(38548831-38548917)
chr8 (1-102)||(11788360-11788461)
chr8 (52-100)||(17807060-17807108)
chr8 (52-119)||(5038062-5038129)
chr8 (52-119)||(13106826-13106893)
chr8 (62-129)||(15562436-15562503)
chr8 (52-119)||(35509236-35509303)
chr8 (52-138)||(29237154-29237240)
chr8 (52-138)||(33707209-33707295)
chr8 (6-99)||(8654542-8654634)
chr8 (52-119)||(8608259-8608327)
chr8 (35-119)||(27406935-27407019)
[»] chr7 (47 HSPs)
chr7 (1-141)||(37796165-37796305)
chr7 (4-138)||(39859216-39859350)
chr7 (4-138)||(24228396-24228530)
chr7 (4-138)||(37115513-37115647)
chr7 (1-138)||(34776899-34777036)
chr7 (4-119)||(6602357-6602472)
chr7 (4-119)||(13168142-13168260)
chr7 (4-119)||(30940412-30940527)
chr7 (4-118)||(45359359-45359473)
chr7 (4-117)||(38474130-38474243)
chr7 (4-138)||(47386196-47386330)
chr7 (19-141)||(13018033-13018157)
chr7 (19-138)||(27666067-27666186)
chr7 (4-89)||(48852334-48852419)
chr7 (59-139)||(37791656-37791736)
chr7 (7-138)||(29996504-29996635)
chr7 (36-138)||(56333-56435)
chr7 (52-138)||(13169683-13169769)
chr7 (52-138)||(39857648-39857734)
chr7 (51-119)||(13039641-13039709)
chr7 (4-99)||(35693357-35693454)
chr7 (1-105)||(1546323-1546427)
chr7 (19-119)||(20478064-20478164)
chr7 (19-99)||(33038799-33038879)
chr7 (22-104)||(35344295-35344377)
chr7 (52-138)||(47384297-47384383)
chr7 (7-56)||(23906251-23906300)
chr7 (1-101)||(46996686-46996786)
chr7 (64-119)||(38549569-38549624)
chr7 (22-104)||(8423286-8423368)
chr7 (52-138)||(22155847-22155933)
chr7 (52-138)||(22211762-22211848)
chr7 (60-138)||(24226584-24226662)
chr7 (52-138)||(35403619-35403705)
chr7 (60-138)||(46437110-46437188)
chr7 (52-138)||(48227941-48228027)
chr7 (60-137)||(35691431-35691508)
chr7 (19-99)||(2167521-2167601)
chr7 (59-138)||(37113944-37114023)
chr7 (52-138)||(78014-78100)
chr7 (4-101)||(45463710-45463807)
chr7 (6-98)||(23953848-23953940)
chr7 (52-119)||(6605397-6605464)
chr7 (52-119)||(35401991-35402058)
chr7 (60-138)||(23904586-23904664)
chr7 (4-57)||(6056850-6056903)
chr7 (5-105)||(27955406-27955506)
[»] chr4 (44 HSPs)
chr4 (4-138)||(41761733-41761867)
chr4 (1-119)||(41781561-41781679)
chr4 (4-138)||(49523127-49523261)
chr4 (1-141)||(2693237-2693376)
chr4 (1-141)||(11601671-11601810)
chr4 (4-144)||(35404432-35404572)
chr4 (4-119)||(48646734-48646849)
chr4 (12-138)||(48813790-48813916)
chr4 (5-119)||(51011948-51012062)
chr4 (4-119)||(52868136-52868251)
chr4 (4-85)||(42980691-42980772)
chr4 (51-119)||(2691395-2691463)
chr4 (19-138)||(43519427-43519546)
chr4 (60-138)||(48645258-48645336)
chr4 (19-119)||(7149561-7149661)
chr4 (19-106)||(13450982-13451069)
chr4 (51-138)||(20819988-20820075)
chr4 (52-119)||(39345586-39345653)
chr4 (60-138)||(35401752-35401830)
chr4 (6-99)||(35996105-35996198)
chr4 (22-99)||(44794765-44794842)
chr4 (52-138)||(4173740-4173826)
chr4 (52-138)||(43507170-43507256)
chr4 (52-138)||(43508653-43508739)
chr4 (19-101)||(44558495-44558577)
chr4 (52-138)||(49524733-49524819)
chr4 (4-101)||(5484580-5484677)
chr4 (4-101)||(39921534-39921631)
chr4 (4-101)||(43779854-43779951)
chr4 (22-99)||(47941853-47941930)
chr4 (22-101)||(10372711-10372790)
chr4 (52-138)||(20493830-20493916)
chr4 (7-101)||(39189422-39189516)
chr4 (4-101)||(39083679-39083776)
chr4 (4-101)||(44994274-44994371)
chr4 (60-116)||(54387890-54387945)
chr4 (52-143)||(319271-319362)
chr4 (6-101)||(2350496-2350591)
chr4 (22-101)||(10762621-10762700)
chr4 (19-77)||(2827468-2827526)
chr4 (72-137)||(11254123-11254188)
chr4 (4-101)||(32652139-32652236)
chr4 (29-85)||(27624862-27624918)
chr4 (4-56)||(44972496-44972548)
[»] chr5 (36 HSPs)
chr5 (4-138)||(17574321-17574455)
chr5 (7-138)||(36057603-36057734)
chr5 (4-138)||(7267846-7267980)
chr5 (4-138)||(34327638-34327772)
chr5 (4-136)||(30468267-30468399)
chr5 (5-141)||(18624996-18625132)
chr5 (4-119)||(2179809-2179924)
chr5 (4-138)||(8539678-8539812)
chr5 (60-141)||(41493844-41493925)
chr5 (35-138)||(24541230-24541333)
chr5 (19-119)||(29621783-29621883)
chr5 (60-138)||(8541279-8541357)
chr5 (52-138)||(12738736-12738822)
chr5 (52-138)||(12801559-12801645)
chr5 (52-138)||(30463903-30463989)
chr5 (50-116)||(43492131-43492197)
chr5 (19-138)||(2854329-2854447)
chr5 (19-101)||(18728604-18728686)
chr5 (19-95)||(32087560-32087636)
chr5 (19-119)||(40780572-40780672)
chr5 (35-119)||(42473625-42473709)
chr5 (19-118)||(35395356-35395455)
chr5 (52-138)||(7269446-7269532)
chr5 (1-119)||(27349178-27349296)
chr5 (6-99)||(38178082-38178175)
chr5 (6-99)||(38205306-38205399)
chr5 (19-99)||(15459191-15459271)
chr5 (52-119)||(32134253-32134320)
chr5 (6-85)||(35292371-35292450)
chr5 (19-85)||(43318062-43318128)
chr5 (52-101)||(28813765-28813814)
chr5 (1-37)||(28819391-28819427)
chr5 (29-101)||(38596908-38596980)
chr5 (52-138)||(2852889-2852975)
chr5 (60-138)||(34328835-34328913)
chr5 (22-102)||(27077437-27077517)
[»] chr3 (59 HSPs)
chr3 (4-138)||(53190766-53190900)
chr3 (4-119)||(51684632-51684747)
chr3 (4-138)||(27899088-27899222)
chr3 (4-119)||(21348745-21348860)
chr3 (3-138)||(54898440-54898575)
chr3 (4-141)||(42279507-42279644)
chr3 (4-119)||(35905719-35905834)
chr3 (4-138)||(2226159-2226293)
chr3 (4-138)||(43765140-43765274)
chr3 (4-119)||(23293177-23293292)
chr3 (4-138)||(2377032-2377166)
chr3 (4-138)||(30599925-30600059)
chr3 (7-138)||(41977753-41977884)
chr3 (4-119)||(17515332-17515447)
chr3 (4-138)||(46112490-46112624)
chr3 (1-99)||(46197762-46197860)
chr3 (7-116)||(3152228-3152337)
chr3 (19-119)||(2660234-2660334)
chr3 (4-78)||(48830813-48830887)
chr3 (60-138)||(51686402-51686480)
chr3 (4-63)||(7884880-7884939)
chr3 (7-138)||(44794211-44794341)
chr3 (52-119)||(23291592-23291659)
chr3 (4-67)||(44276203-44276266)
chr3 (52-138)||(611222-611308)
chr3 (52-146)||(7883323-7883417)
chr3 (25-119)||(23774174-23774268)
chr3 (60-138)||(42282481-42282559)
chr3 (52-149)||(46308799-46308896)
chr3 (6-99)||(48633919-48634012)
chr3 (5-95)||(19987602-19987692)
chr3 (52-138)||(38193510-38193596)
chr3 (52-138)||(41979352-41979438)
chr3 (52-138)||(46310436-46310522)
chr3 (60-138)||(48829359-48829437)
chr3 (52-138)||(53094273-53094359)
chr3 (6-118)||(23888761-23888873)
chr3 (52-138)||(3150255-3150341)
chr3 (6-104)||(18430260-18430358)
chr3 (60-138)||(30598340-30598418)
chr3 (19-101)||(40508913-40508995)
chr3 (60-138)||(44267984-44268062)
chr3 (52-138)||(54900074-54900160)
chr3 (4-45)||(600805-600846)
chr3 (19-99)||(25535251-25535331)
chr3 (21-85)||(33113184-33113248)
chr3 (6-85)||(31887441-31887520)
chr3 (52-119)||(35903847-35903914)
chr3 (22-101)||(41021008-41021087)
chr3 (52-119)||(53187764-53187831)
chr3 (60-138)||(2378991-2379069)
chr3 (1-119)||(2977313-2977431)
chr3 (65-115)||(24846559-24846609)
chr3 (52-138)||(38191898-38191984)
chr3 (19-85)||(45898350-45898416)
chr3 (52-138)||(46611303-46611389)
chr3 (52-138)||(53092626-53092712)
chr3 (4-57)||(5133080-5133133)
chr3 (61-109)||(46114114-46114162)
[»] chr2 (41 HSPs)
chr2 (4-138)||(39664755-39664889)
chr2 (4-138)||(40560226-40560360)
chr2 (4-138)||(16763079-16763213)
chr2 (4-138)||(44709752-44709886)
chr2 (5-138)||(14389092-14389225)
chr2 (4-138)||(19908253-19908388)
chr2 (4-138)||(17696209-17696343)
chr2 (4-119)||(2766956-2767071)
chr2 (7-122)||(6797526-6797641)
chr2 (4-99)||(16377204-16377299)
chr2 (4-83)||(42519212-42519291)
chr2 (1-141)||(37645487-37645627)
chr2 (4-85)||(39455225-39455306)
chr2 (51-141)||(31475079-31475169)
chr2 (51-141)||(37646477-37646567)
chr2 (19-119)||(24208064-24208164)
chr2 (1-118)||(17946117-17946234)
chr2 (19-119)||(6786003-6786103)
chr2 (35-138)||(19581417-19581520)
chr2 (52-119)||(19906704-19906771)
chr2 (1-99)||(7744085-7744183)
chr2 (52-138)||(16376739-16376825)
chr2 (62-119)||(162085-162142)
chr2 (19-106)||(11315337-11315424)
chr2 (6-101)||(37417313-37417408)
chr2 (19-85)||(29909662-29909728)
chr2 (22-101)||(15372539-15372618)
chr2 (60-119)||(34400336-34400395)
chr2 (52-119)||(39663176-39663243)
chr2 (19-101)||(39596-39678)
chr2 (52-138)||(14387352-14387438)
chr2 (52-138)||(16764611-16764697)
chr2 (60-118)||(17948937-17948995)
chr2 (22-99)||(41706581-41706658)
chr2 (65-105)||(7745287-7745327)
chr2 (19-119)||(37020530-37020630)
chr2 (52-144)||(40561878-40561970)
chr2 (19-85)||(39399-39465)
chr2 (4-101)||(11023000-11023097)
chr2 (34-99)||(15432370-15432435)
chr2 (4-101)||(28246703-28246800)
[»] chr1 (40 HSPs)
chr1 (4-138)||(2869582-2869716)
chr1 (4-138)||(50556084-50556218)
chr1 (7-138)||(4855956-4856087)
chr1 (4-147)||(25278355-25278498)
chr1 (4-119)||(31238482-31238597)
chr1 (4-138)||(6818665-6818799)
chr1 (4-138)||(34778125-34778259)
chr1 (4-136)||(51896139-51896271)
chr1 (4-138)||(37344345-37344479)
chr1 (4-105)||(15104477-15104578)
chr1 (39-138)||(25278975-25279074)
chr1 (4-138)||(27087286-27087420)
chr1 (4-138)||(3013457-3013597)
chr1 (7-138)||(46583546-46583677)
chr1 (5-143)||(33602632-33602770)
chr1 (19-119)||(9121670-9121770)
chr1 (1-119)||(51121927-51122045)
chr1 (60-138)||(52641891-52641969)
chr1 (4-138)||(52643607-52643736)
chr1 (61-119)||(25278876-25278934)
chr1 (19-119)||(47013084-47013184)
chr1 (6-85)||(42134538-42134617)
chr1 (52-138)||(3011858-3011944)
chr1 (52-138)||(31236822-31236908)
chr1 (22-99)||(27940650-27940727)
chr1 (52-144)||(34776566-34776658)
chr1 (6-85)||(36895499-36895578)
chr1 (52-119)||(46582032-46582099)
chr1 (52-138)||(26223590-26223676)
chr1 (54-138)||(8167945-8168029)
chr1 (19-119)||(35479977-35480077)
chr1 (60-119)||(37088144-37088203)
chr1 (6-85)||(46638796-46638875)
chr1 (65-119)||(2871089-2871143)
chr1 (52-138)||(8169568-8169654)
chr1 (52-138)||(25276745-25276831)
chr1 (52-138)||(37345962-37346048)
chr1 (52-138)||(50554166-50554252)
chr1 (6-95)||(31801679-31801768)
chr1 (6-99)||(45380973-45381066)
[»] chr6 (33 HSPs)
chr6 (4-119)||(6899507-6899622)
chr6 (5-119)||(32439079-32439193)
chr6 (4-117)||(20523390-20523503)
chr6 (4-119)||(10568421-10568536)
chr6 (4-138)||(7372945-7373079)
chr6 (1-119)||(14338459-14338577)
chr6 (4-119)||(13613569-13613684)
chr6 (4-138)||(32516880-32517014)
chr6 (4-85)||(9398716-9398797)
chr6 (4-138)||(11355225-11355359)
chr6 (60-143)||(21068623-21068706)
chr6 (19-119)||(3456770-3456870)
chr6 (8-63)||(7049835-7049890)
chr6 (60-138)||(6902906-6902983)
chr6 (52-150)||(9400035-9400133)
chr6 (60-138)||(10569927-10570005)
chr6 (62-138)||(7051255-7051331)
chr6 (78-138)||(8605351-8605411)
chr6 (19-119)||(32455893-32455993)
chr6 (6-101)||(3018421-3018516)
chr6 (63-142)||(33276800-33276879)
chr6 (22-100)||(2968180-2968258)
chr6 (72-138)||(7371178-7371244)
chr6 (4-101)||(17952029-17952126)
chr6 (22-101)||(4641395-4641474)
chr6 (52-98)||(21045353-21045399)
chr6 (52-138)||(32518497-32518583)
chr6 (88-119)||(7049808-7049839)
chr6 (22-101)||(29077368-29077447)
chr6 (22-101)||(29112340-29112419)
chr6 (52-99)||(33267103-33267150)
chr6 (94-143)||(21091104-21091153)
chr6 (19-119)||(35175865-35175965)
[»] scaffold1454 (1 HSPs)
scaffold1454 (4-138)||(1266-1400)
[»] scaffold0058 (3 HSPs)
scaffold0058 (7-138)||(3297-3428)
scaffold0058 (7-138)||(4469-4600)
scaffold0058 (52-150)||(14343-14441)
[»] scaffold0564 (1 HSPs)
scaffold0564 (4-138)||(8265-8397)
[»] scaffold0002 (1 HSPs)
scaffold0002 (65-141)||(436265-436341)
[»] scaffold0477 (1 HSPs)
scaffold0477 (22-101)||(6639-6718)
[»] scaffold0006 (1 HSPs)
scaffold0006 (70-118)||(38298-38346)


Alignment Details
Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 26242321 - 26242455
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  26242321 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctg 26242420  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||  ||| | |||||||||||    
T  26242421 atttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 8609794 - 8609928
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |    
T  8609794 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccg 8609893  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  8609894 attttttaaaattcaagaacgaatttgaggtatta 8609928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 13282615 - 13282481
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||| |    
T  13282615 cactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccg 13282516  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  13282515 attttttaaaattcaaggacgaatttgaggtatta 13282481  T

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Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 7745119 - 7745253
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||||  | ||||||||||||||    
T  7745119 cactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctg 7745218  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||| ||| | ||||| |||||    
T  7745219 atttttgaaaattcaaagacgaatttgagatatta 7745253  T

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Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 41042591 - 41042730
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||      
T  41042591 cactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaatttggcca 41042690  T
Q  104 atttttgaaaattcaaatacggagttgaggtattactcga 143  Q
    |||||| |||||||||  ||||| || |||||||| ||||    
T  41042691 attttttaaaattcaaggacggatttaaggtattagtcga 41042730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 42941911 - 42941777
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||||||| || ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||||||| |||||||  ||||||||||||||||    
T  42941911 cactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctg 42941812  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  42941811 attttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 41825652 - 41825785
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||   |||    
T  41825652 actaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttga 41825751  T
Q  105 tttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||||||||  ||| | |||||||||||    
T  41825752 tttttgaaaattcaaggacgaatttgaggtatta 41825785  T

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Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 38547365 - 38547231
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||   ||||| ||||||| |    
T  38547365 cactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccg 38547266  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  38547265 attttttaaaattcaaggacgaacttgaggtatta 38547231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 22272473 - 22272337
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||| |||||||| |||||||||||||| |||||||||| ||||||||||||||||| |||||||||  |||||||||||| |||    
T  22272473 cactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacgaatttgactg 22272374  T
Q  104 a--tttttgaaaattcaaatacggagttgaggtatta 138  Q
    |  ||||| |||||||||| ||| | |||||||||||    
T  22272373 attttttttaaaattcaaagacgaatttgaggtatta 22272337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 13108343 - 13108458
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||  |||||| |||| || |    
T  13108343 cactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccg 13108442  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  13108443 attttttaaaattcaa 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 13486107 - 13486221
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | ||||||| || | ||    
T  13486107 actaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacgaatctgaccga 13486206  T
Q  105 tttttgaaaattcaa 119  Q
    ||||| |||||||||    
T  13486207 tttttaaaaattcaa 13486221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 9673172 - 9673287
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||  ||||||||||| |||     
T  9673172 cactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttagcta 9673271  T
Q  104 atttttgaaaattcaa 119  Q
    |||  |||| ||||||    
T  9673272 attgatgaagattcaa 9673287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 27691286 - 27691157
Alignment:
Q  9 acggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttt 108  Q
    ||||| ||| |||||||||||||   ||||||||||||||||||||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||    
T  27691286 acggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttt 27691187  T
Q  109 tgaaaattcaaatacggagttgaggtatta 138  Q
    | |||||||||  ||| | |||||||||||    
T  27691186 tcaaaattcaaggacgaatttgaggtatta 27691157  T

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Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 5036567 - 5036448
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    ||||||||| |||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||  |||||||||||| | ||||||| |||||| |    
T  5036567 tggacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaattta 5036468  T
Q  119 aatacggagttgaggtatta 138  Q
    |  ||| | |||||||||||    
T  5036467 aggacgaatttgaggtatta 5036448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 26238807 - 26238729
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||| | |||||||||||    
T  26238807 ggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 26238729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 34681074 - 34681152
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||  ||| | |||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 34681152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 42943426 - 42943512
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||| ||||||| |||||||||  ||| | |||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 42943512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 40339688 - 40339760
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttc 77  Q
    ||||||||||||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  40339688 actaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttc 40339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 33761158 - 33761072
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||||||||||| |||||||||| ||| | |||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtatta 33761072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 43262145 - 43262223
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||  ||| | |||||||||||    
T  43262145 ggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtatta 43262223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 31821540 - 31821464
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaa 95  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||| | ||||||||||| ||||  ||||||||    
T  31821540 tggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaa 31821464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 5075479 - 5075390
Alignment:
Q  30 accattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||||||||||||||  |  ||||||  |||| |||| ||||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  5075479 accattttgatggacgtgagagaaattcaaggacaaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcaa 5075390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 9672066 - 9671974
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgat 144  Q
    |||||| |||||||||||||||||||||||||||   |||||||||||  |||||  |||||||||||  ||| | || ||||||||||||||    
T  9672066 aaattcggggactaaatagatatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaaggacgaatttaaggtattactcgat 9671974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 33708814 - 33708902
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaa 95  Q
    ||||||| ||| |||||||||||||   |||||||||||| |||||||||| |||||||| |  |||||||||||||||  ||||||||    
T  33708814 taacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaa 33708902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 31201148 - 31201227
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||||| ||||||||||| ||||   |||||||||||||    
T  31201148 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggc 31201227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 41823971 - 41823912
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||||||||||||||||||||||||   ||||||| || ||||||||||||||||||||    
T  41823971 ggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaa 41823912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 29239187 - 29239273
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||| ||||||| |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 29239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 37526025 - 37526091
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||||||| |||||||||| ||||| ||||||| |||||||| | ||||||||||| ||||    
T  37526025 tggacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataatt 37526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 42897776 - 42897858
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||||||| ||||||||||||||||  ||||||  ||||||| | |||||||| || ||||  ||||||||||||||    
T  42897776 tggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggc 42897858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 601704 - 601805
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgatattaatg 151  Q
    |||||| |||||||| | ||||||||| ||||||  |||||||| ||||| ||||||| |||||||||  ||| | ||||||||||| ||  ||||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtctttattaatg 601803  T
Q  152 tt 153  Q
    ||    
T  601804 tt 601805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 40020622 - 40020719
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||||||||||||||||    
T  40020622 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 40020719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 9184505 - 9184405
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||||||| ||| ||||||||  |||||| |||||||| | ||||||||||  | || || |||||||||||| ||||  || |||||||    
T  9184505 tggacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattca 9184406  T
Q  119 a 119  Q
    |    
T  9184405 a 9184405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 9186654 - 9186726
Alignment:
Q  59 gggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttga 131  Q
    |||||||| | ||||||||||| ||||||||||||| ||||||||||  ||| ||||||||  ||||||||||    
T  9186654 gggactaatttgatatttcgcataatttggggacgattttggctgatccttgtaaattcaaggacggagttga 9186726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 22273891 - 22273958
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||||||||||||| ||||||||  | ||| |||||||| ||||||| |||||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaa 22273958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 13484613 - 13484567
Alignment:
Q  73 atttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaa 13484567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 15305919 - 15305861
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttc 77  Q
    |||||||||||||   ||||||||||||||||||||||| |||||||| | ||||||||    
T  15305919 tggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttc 15305861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 15486288 - 15486230
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttc 77  Q
    |||||||||||||   ||||||||||||||||||||||| |||||||| | ||||||||    
T  15486288 tggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttc 15486230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 27692837 - 27692923
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||| ||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 27692923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 33750386 - 33750468
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||||||| |||||||| | |||||  |||||| |||||||| | ||||||||||| ||||  |||||||| |||||    
T  33750386 tggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggc 33750468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 33762713 - 33762799
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||| ||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 33762799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 38548831 - 38548917
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||| ||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 38548917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11788461 - 11788360
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||||||||| ||| |  ||||||||||||  | |||||||||||||||| ||||||  |||| || | |||||||||  ||||| ||||||||| ||||    
T  11788461 catcactaacagagatattggacggagggatgaatttgatggacgtctgttaaattcgaggacaaatttgatatttcgataaattaggggacgaagttgg 11788362  T
Q  101 ct 102  Q
    ||    
T  11788361 ct 11788360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 17807108 - 17807060
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||||| ||||||||||| |||||| |||||||||| ||||||||||||    
T  17807108 aaattcggggactaaataaatattttgcaaaatttgaggacgaatttgg 17807060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 5038062 - 5038129
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||||||| ||||||||||||||   | ||||||||| | ||||||| |||||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa 5038129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 13106893 - 13106826
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||| | ||||||||||||||||  |||| ||| ||||| ||||||| |||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaa 13106826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 15562503 - 15562436
Alignment:
Q  62 actaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagtt 129  Q
    ||||||| |||||||  ||||||||  ||||||||||| ||||||||| |||||||||| ||| ||||    
T  15562503 actaaattgatattttacaaaatttaaggacgaatttgactgatttttaaaaattcaaagacgaagtt 15562436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 35509303 - 35509236
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||| | ||||||| |||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaa 35509236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 29237240 - 29237154
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||| ||||||  |||||||| ||| | ||||||| |||||||||  ||| | |||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 29237154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 33707295 - 33707209
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||| ||||||  |||||||| ||| | ||||||| |||||||||  ||| | |||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33707209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 8654634 - 8654542
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||   |||||||||||||| ||||||||||||||||  ||||||  | | ||||| ||||||||||| ||||  || |||||||||    
T  8654634 ctaacggagcacttggacggagggacccttttgatggacgtctgataaattcaagaattaaat-gatatttcgcataattgaggaacgaatttg 8654542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 8608327 - 8608259
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaattt-ggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||| | |||||||||||||||||  |||||||| ||| | ||||||| |||||||||    
T  8608327 aaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaa 8608259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 27406935 - 27407019
Alignment:
Q  35 tttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||||||||||||||||||||| |||||||  |  |||||||| | ||||   ||||||| |||||  |||||| |||||||||    
T  27406935 tttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatttttcaaaattcaa 27407019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 5e-50; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37796165 - 37796305
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  37796165 catcgctaacggagcttatggacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttgg 37796264  T
Q  101 ctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    |||||||||||||||||||  ||  | ||||||||||||||    
T  37796265 ctgatttttgaaaattcaaggacaaatttgaggtattactc 37796305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 39859216 - 39859350
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||  ||||| |||||||| |    
T  39859216 cactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccg 39859315  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  39859316 attttttaaaattcaaggacgaatttgaggtatta 39859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 24228396 - 24228530
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  ||||||||||||||      
T  24228396 cactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggcca 24228495  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  24228496 attttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 37115513 - 37115647
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||||||  || ||||||||| |||    
T  37115513 cactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacgaatttgactg 37115612  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  37115613 attttttaaaattcaatgacgaatttgaggtatta 37115647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 34776899 - 34777036
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || | ||||||||    
T  34776899 catcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttgg 34776998  T
Q  101 ctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |  |||||| |||||| ||  ||| | |||||||||||    
T  34776999 ccaattttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 6602472 - 6602357
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||  | ||| || |    
T  6602472 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagtttagccg 6602373  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  6602372 attttttaaaattcaa 6602357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 13168260 - 13168142
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattc---tgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||   ||||||||||||    
T  13168260 cactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacgaatttgg 13168161  T
Q  101 ctgatttttgaaaattcaa 119  Q
    | ||||||| |||||||||    
T  13168160 ccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 30940412 - 30940527
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  | |||||||||||| |    
T  30940412 cactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacgaatttggccg 30940511  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  30940512 attttttaaaattcaa 30940527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 45359473 - 45359359
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   ||||| ||||| | |    
T  45359473 cactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgaccg 45359374  T
Q  104 atttttgaaaattca 118  Q
    |||||| ||||||||    
T  45359373 attttttaaaattca 45359359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 38474130 - 38474243
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||| ||||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||| | |    
T  38474130 cactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccg 38474229  T
Q  104 atttttgaaaattc 117  Q
    |||||| |||||||    
T  38474230 atttttaaaaattc 38474243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 47386196 - 47386330
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||   ||||||||||| |||    
T  47386196 cactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacgaatttgactg 47386295  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||| ||  ||| | |||||||||||    
T  47386296 attttttaaaattaaaggacgaatttgaggtatta 47386330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 13018157 - 13018033
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatat--ttcgcaaaatttggggacgaatttggctgatttttgaaaatt 116  Q
    |||||||||||||||||||||||||||| ||| |||||| | ||  ||||||||||  ||||| ||||||| ||||||||||||||||||||| ||||||    
T  13018157 tggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggctgattttttaaaatt 13018058  T
Q  117 caaatacggagttgaggtattactc 141  Q
    |||  | | | ||||||||||||||    
T  13018057 caaggatgaatttgaggtattactc 13018033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 27666067 - 27666186
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   |||||||||||| |||||||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| ||||||||    
T  27666067 tggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattca 27666166  T
Q  119 aatacggagttgaggtatta 138  Q
    |  ||| | |||||||||||    
T  27666167 aggacgaatttgaggtatta 27666186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 48852334 - 48852419
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggg 89  Q
    ||||||| |||||| ||||| ||| |||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||||||    
T  48852334 cactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatttggg 48852419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 37791736 - 37791656
Alignment:
Q  59 gggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattac 139  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||| ||| |||| |||||||||    
T  37791736 gggactaaatagatatttggcaaaatttggggatgaatttggctgattttttaaaatttaaagacgaagtttaggtattac 37791656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 29996504 - 29996635
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||| ||| |||| |||||||| | ||||||||||||||||||||||| |||| ||| | ||||||||||||||||  ||||| || ||| | ||||    
T  29996504 taacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatt 29996603  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    ||| |||||||||  ||| | |||||||||||    
T  29996604 tttcaaaattcaaggacgaatttgaggtatta 29996635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 56435 - 56333
Alignment:
Q  36 ttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggta 135  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||  |||||||| || || ||||||| |||||||||  ||| | ||||||||    
T  56435 ttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggta 56336  T
Q  136 tta 138  Q
    |||    
T  56335 tta 56333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 13169683 - 13169769
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||  ||| | |||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 13169769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 39857734 - 39857648
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| | ||||||| |||||||||  ||| | |||||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 13039641 - 13039709
Alignment:
Q  51 aaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaa 13039709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 35693357 - 35693454
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaa--atagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||| || ||| |||| |||||||||||||||||||||||||||||||||| ||||||||  | ||||||| |||||||||   |||||||||||    
T  35693357 cactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaaggacgaatttg 35693454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 1546427 - 1546323
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||  |  ||||||  ||||  ||| ||||||||||||||||||  ||||| ||||     
T  1546427 catcactaacggaccttttggacggagggaccattttgatggacgtgagagaaattcaaggacgcaattgatatttcgcaaaatttgaagacgattttga 1546328  T
Q  101 ctgat 105  Q
    |||||    
T  1546327 ctgat 1546323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 20478164 - 20478064
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||| ||||||| |||||||| | ||||||||| ||||||  || ||||| ||||| ||||||| ||||||||    
T  20478164 tggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatttttcaaaattca 20478065  T
Q  119 a 119  Q
    |    
T  20478064 a 20478064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 33038799 - 33038879
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||| | ||||||||||| ||||  |||| |||||||    
T  33038799 tggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttg 33038879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 35344295 - 35344377
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    ||||||||||| |||||||||||||||   |||||| |||| ||||| ||||||||||| ||||  |||||||||||||||||    
T  35344295 acggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctga 35344377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 47384383 - 47384297
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| ||||||||||||||||||   |||||||||||||| |||||| |||||||||  ||| | |||||||||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtatta 47384297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 23906251 - 23906300
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaatt 56  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  23906251 taacggagcttttggacggagggaccattttgatggacgactgtaaaatt 23906300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 46996686 - 46996786
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||| ||||||||||   |||||||||||||| ||||||||||||||||  |||||| | |||||| | ||||||||||| ||||  |||||||| ||||    
T  46996686 catcgctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttgg 46996785  T
Q  101 c 101  Q
    |    
T  46996786 c 46996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 38549624 - 38549569
Alignment:
Q  64 taaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||    
T  38549624 taaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaa 38549569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 8423286 - 8423368
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    ||||||||||| ||||||| ||||||||  |||||| |||| ||||| ||||||||||| ||||  ||||| |||||||||||    
T  8423286 acggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggctga 8423368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 22155847 - 22155933
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| ||||| |||||| ||||| ||||||||   ||||||||||||| |||||||||||||||||  ||| |||| ||||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtatta 22155933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 22211762 - 22211848
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| ||||| |||||| ||||| ||||||||   ||||||||||||| |||||||||||||||||  ||| |||| ||||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtatta 22211848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 24226662 - 24226584
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||| |||||| ||||||||||||||   ||||||||||||| |||||||||||||||||  ||| | |||||||||||    
T  24226662 ggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 24226584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 35403619 - 35403705
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtatta 35403705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 46437188 - 46437110
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||| |||||| ||||||||||||||    ||||||||||||||||||||||||||||||  ||| | |||||||||||    
T  46437188 ggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 46437110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 48227941 - 48228027
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| ||||| |||||||||||||||||||||    |||||||||| | ||||||| |||||||||| ||| | |||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 35691508 - 35691431
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatt 137  Q
    |||| |||||| ||||||||||||||| | |||||||||| | |||||||||||||||||  ||| | ||||||||||    
T  35691508 ggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 2167601 - 2167521
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    |||||||||||||| ||||||||| ||||||  |||||| |||||||| | ||||||||||| ||||  |||| |||||||    
T  2167601 tggacggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttg 2167521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 37114023 - 37113944
Alignment:
Q  59 gggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||||||||||||||||||||  |||| ||||||| |  |||||| |||||||||  ||| | |||||||||||    
T  37114023 gggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtatta 37113944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 78014 - 78100
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| ||||| || | ||||||| ||||||||  |||||||| ||||| ||||||| |||||||||| ||| | |||||||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtatta 78100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 45463807 - 45463710
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||| ||||||||||||||    
T  45463807 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 45463710  T

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Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 23953940 - 23953848
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaattt 98  Q
    ||||||||||   |||||||||||||| ||||||| ||||||||  ||||||  ||||||| | ||||||||||| ||||   ||||||||||    
T  23953940 ctaacggagcacttggacggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattt 23953848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 6605397 - 6605464
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||||||| ||||||||||||||  || || |||||| | ||||||| |||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaa 6605464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 35402058 - 35401991
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| || || ||||||| |||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaa 35401991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 23904664 - 23904586
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||| ||||| ||||||||  | |||||||||| | ||||||| |||||||||  ||| | |||||||||||    
T  23904664 ggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 23904586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 6056903 - 6056850
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattc 57  Q
    |||||||||||| | |||||||| |||| |||||||||||||| ||| ||||||    
T  6056903 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaattc 6056850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 27955506 - 27955406
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    |||||||||||   ||||||||||||||  |||||||||||||||  |||||| |  | ||| | ||||||||| ||||||  |||| |||||| |||||    
T  27955506 actaacggagcacttggacggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctga 27955407  T
Q  105 t 105  Q
    |    
T  27955406 t 27955406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 41761733 - 41761867
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |    
T  41761733 cactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccg 41761832  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||  ||| | |||||||||||    
T  41761833 atttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 41781679 - 41781561
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||  ||||| ||||||     
T  41781679 catcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggacaaatttga 41781580  T
Q  101 ctgatttttgaaaattcaa 119  Q
    | ||||||| |||||||||    
T  41781579 ccgattttttaaaattcaa 41781561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 49523261 - 49523127
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||||||  || ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||   |||||||||| || |    
T  49523261 cactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttagccg 49523162  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  49523161 attttttaaaattcaatgacgaatttgaggtatta 49523127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 2693237 - 2693376
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||| | | ||||||||   |||||||||||||||||||||||||| || |  |||||||    
T  2693237 catcactaatggaacttatggacggatggaccattttgatggacattt-taaaattcaaagactaaatagatatttcgcaaaatttaggaataaatttgg 2693335  T
Q  101 ctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    ||||||||| |||||||||| ||| ||||||||||||||||    
T  2693336 ctgattttttaaaattcaaagacgaagttgaggtattactc 2693376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 11601810 - 11601671
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||  ||||||     
T  11601810 catcactaacgaagcttgtggacagagggactattttgatggacgtctgtaaaattcagggact-aatatatattttgcaaaatttggggataaatttga 11601712  T
Q  101 ctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    |||||||||||||||||||  ||| | || |||||||||||    
T  11601711 ctgatttttgaaaattcaagaacgaattttaggtattactc 11601671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 35404432 - 35404572
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||| |||||| |||||||||||||||   |||||||||| || |    
T  35404432 cactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaatttagccg 35404531  T
Q  104 atttttgaaaattcaaatacggagttgaggtattactcgat 144  Q
    |||||| ||||||||| || | |  |||||||||| |||||    
T  35404532 attttttaaaattcaagtatgaatctgaggtattagtcgat 35404572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 48646734 - 48646849
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||| ||||| |||||||| |||||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||   |||||||||| ||||    
T  48646734 cactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacgaatttagctg 48646833  T
Q  104 atttttgaaaattcaa 119  Q
    | ||||||||||||||    
T  48646834 acttttgaaaattcaa 48646849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 48813916 - 48813790
Alignment:
Q  12 gagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttga 111  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||| || |||||||| |||||| ||||||||  ||||  ||||||||||||||||||    
T  48813916 gagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttga 48813817  T
Q  112 aaattcaaatacggagttgaggtatta 138  Q
    ||||||||  ||| | |||||||||||    
T  48813816 aaattcaaggacgaatttgaggtatta 48813790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 51012062 - 51011948
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||   | | ||||||| | ||    
T  51012062 actaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgaccga 51011963  T
Q  105 tttttgaaaattcaa 119  Q
    ||||| |||||||||    
T  51011962 ttttttaaaattcaa 51011948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 52868136 - 52868251
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||| || |||||||||||| | ||||||| |||||| | ||||||||||||||||||||||||||   |||||||||| | |    
T  52868136 cactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccg 52868235  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  52868236 attttttaaaattcaa 52868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 42980772 - 42980691
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  42980772 cactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaatt 42980691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 2691463 - 2691395
Alignment:
Q  51 aaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaa 2691395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 43519546 - 43519427
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   |||||||||||| |||||||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| ||||||||    
T  43519546 tggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattca 43519447  T
Q  119 aatacggagttgaggtatta 138  Q
    |  ||| | |||||||||||    
T  43519446 aggacgaatttgaggtatta 43519427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 48645336 - 48645258
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||  ||| | |||||||||||    
T  48645336 ggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 48645258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 7149661 - 7149561
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||||||||||| ||| | ||| ||||||  |||  ||||| ||||||||||||||||   || ||||| ||||||||||||||||||||    
T  7149661 tggacggagggaccattttgattgacctatgttaaattcaaggatgaaataaatatttcgcaaaatttaaagatgaattcggctgatttttgaaaattca 7149562  T
Q  119 a 119  Q
    |    
T  7149561 a 7149561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 13450982 - 13451069
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    |||| ||||||||||||||||||||||||||  ||||||  ||||||  | |||||||||  ||||| ||||||||||||||||||||    
T  13450982 tggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaatttggctgatt 13451069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 20820075 - 20819988
Alignment:
Q  51 aaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||| ||||||||||| |||||| ||||||||| || |  |||||| |||||||||||||||||||  ||| |||||||||||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtatta 20819988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 39345653 - 39345586
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||||||| ||||||||||||||  |||||||||||||| ||||||| |||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaa 39345586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 35401830 - 35401752
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||||||||||| |||||||  |||||||||||||| ||||||| |||||||||  ||| | |||||||||||    
T  35401830 ggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 35401752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 35996198 - 35996105
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||   |||||||||||||| ||||||||||||||||  |||||| |||| ||||| ||||||| ||| ||||  ||||||||||||    
T  35996198 ctaacggagcacttggacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttg 35996105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 44794765 - 44794842
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||||| ||||||||||| ||||  ||||||||||||    
T  44794765 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttg 44794842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 4173740 - 4173826
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 4173826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 43507256 - 43507170
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 43507170  T

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Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 43508653 - 43508739
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 43508739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 44558495 - 44558577
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||| ||||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||  |||| |||||||||    
T  44558495 tggacggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggc 44558577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 49524733 - 49524819
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||||| ||||| ||||||||  |||||||||||| | ||||||| |||||||||  ||| | |||||||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 49524819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 5484677 - 5484580
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||||||||||||||||    
T  5484677 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 5484580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 39921631 - 39921534
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||||||||||||||||    
T  39921631 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 39921534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 43779854 - 43779951
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||||||||||||||||    
T  43779854 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 43779951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 47941930 - 47941853
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||||| ||||||||||| ||||  | ||||||||||    
T  47941930 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttg 47941853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 10372711 - 10372790
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| ||||||||||||||||  |||||| ||||  |||| ||||||||||| ||||  ||||| ||||||||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggc 10372790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 20493916 - 20493830
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| || ||||||||||||||||||||||||   | ||||||||||| ||| ||| |||||||||  ||| | |||||||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtatta 20493830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 39189516 - 39189422
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||||||||||||||||    
T  39189516 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 39189422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 39083776 - 39083679
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||| ||||||||||||||    
T  39083776 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 39083679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 44994274 - 44994371
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| |||| |||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||||||||||||||||    
T  44994274 cactaacggaccttttggatggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 44994371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 54387890 - 54387945
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaatt 116  Q
    |||||||||||||||||||||||| || || || |||||||||||||||| ||||||    
T  54387890 ggactaaatagatatttcgcaaaa-ttaggaactaatttggctgatttttaaaaatt 54387945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 319362 - 319271
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcga 143  Q
    |||||| || ||||| | ||||||||||||||||  |||||||| ||| | ||||||| |||||||||  ||| | ||||||||||| ||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcga 319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 2350496 - 2350591
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||   ||||| |||||||| |||||||| |||||||  |||||| | || ||||| ||||||||||| ||||  ||||| ||||||||    
T  2350496 ctaacggagcacttggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggc 2350591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 10762700 - 10762621
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| ||||||||||||||||  |||||| ||||  |||| || |||||||| ||||  ||||| ||||||||    
T  10762700 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggc 10762621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 2827526 - 2827468
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttc 77  Q
    |||||||||||||| ||||||||||||||||  ||||||  ||||||| | ||||||||    
T  2827526 tggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttc 2827468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 11254188 - 11254123
Alignment:
Q  72 tatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatt 137  Q
    ||||||||||||||| | |||| ||||||| ||||||| |||||||||  ||| | ||||||||||    
T  11254188 tatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 32652236 - 32652139
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    ||||||  ||||||  | |||||||||  ||||| |||||||||||||||    
T  32652236 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggc 32652139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 27624918 - 27624862
Alignment:
Q  29 gaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||    
T  27624918 gacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 27624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 44972548 - 44972496
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaatt 56  Q
    |||||||||||| | |||||||| |||| |||||||||||||| ||| |||||    
T  44972548 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaatt 44972496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 17574455 - 17574321
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |    
T  17574455 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccg 17574356  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  17574355 attttttaaaattcaaggacgaatttgaggtatta 17574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 36057603 - 36057734
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||| ||||    
T  36057603 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatt 36057702  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||||||  ||| | |||||||||||    
T  36057703 tttgaaaattcaaggacgaatttgaggtatta 36057734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 7267980 - 7267846
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||||||  |    
T  7267980 cactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacg 7267881  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  7267880 attttttaaaattcaaggacgaatttgaggtatta 7267846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 34327772 - 34327638
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | ||||||||||||      
T  34327772 cactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggcca 34327673  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||| ||||||||||  ||| | |||||||||||    
T  34327672 attttagaaaattcaaggacgaatttgaggtatta 34327638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 30468267 - 30468399
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  | |||||||||| |      
T  30468267 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaatttgacca 30468366  T
Q  104 atttttgaaaattcaaatacggagttgaggtat 136  Q
    |||||| |||||||||  ||| | |||||||||    
T  30468367 attttttaaaattcaaggacgaaattgaggtat 30468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 18624996 - 18625132
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    ||||||||||||| |||||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||||  ||||||||||| |||||    
T  18624996 actaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctga 18625095  T
Q  105 tttttgaaaattcaaatacggagttgaggtattactc 141  Q
    |   |||||||||||  ||| | ||||||||||||||    
T  18625096 tcagtgaaaattcaaggacgaatttgaggtattactc 18625132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 2179924 - 2179809
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| |||||||  |||||||||||| | |    
T  2179924 cactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccg 2179825  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  2179824 attttttaaaattcaa 2179809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 8539812 - 8539678
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||| |||| ||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||   | |||||||||  ||    
T  8539812 cactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattg 8539713  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  8539712 atttttcaaaattcaaggacgaatttgaggtatta 8539678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 41493925 - 41493844
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  41493925 ggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtattactc 41493844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 24541230 - 24541333
Alignment:
Q  35 tttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggt 134  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||    
T  24541230 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggt 24541329  T
Q  135 atta 138  Q
    ||||    
T  24541330 atta 24541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 29621783 - 29621883
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||| ||||||| |||||||| | ||||||||| ||||||  |||||||| ||||| ||||||| ||||||||    
T  29621783 tggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattca 29621882  T
Q  119 a 119  Q
    |    
T  29621883 a 29621883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 8541279 - 8541357
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||| |||||||||  ||| | |||||||||||    
T  8541279 ggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtatta 8541357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 12738736 - 12738822
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||||| ||||||| |||||||||  ||| | |||||||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 12738822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 12801559 - 12801645
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||||| ||||||| |||||||||  ||| | |||||||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 12801645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 30463989 - 30463903
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||| | ||||||| |||||||||  ||| | |||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 30463903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 43492131 - 43492197
Alignment:
Q  50 taaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaatt 116  Q
    |||||||| |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatt 43492197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 2854329 - 2854447
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    ||||||||||||| | |||| |||||||||||||||||| |||||||| | ||| ||||| ||||||  |||||||| ||| | ||||||| ||||||||    
T  2854329 tggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccgatttttcaaaattca 2854427  T
Q  119 aatacggagttgaggtatta 138  Q
    |  ||| | |||||||||||    
T  2854428 aggacgaatttgaggtatta 2854447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 18728604 - 18728686
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||||||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||  |||||||| |||||    
T  18728604 tggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggc 18728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 32087636 - 32087560
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaa 95  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||| | ||||||||||| ||||  ||||||||    
T  32087636 tggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaa 32087560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 40780672 - 40780572
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   |||||||||||| || ||||||| |||||||| | ||||||||| ||||||  |||||||| ||| | ||||||| ||||||||    
T  40780672 tggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattca 40780573  T
Q  119 a 119  Q
    |    
T  40780572 a 40780572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 42473625 - 42473709
Alignment:
Q  35 tttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||||||||||||||||||||| |||||||  | ||||||||| | ||||  |||||||| ||||| ||||||| |||||||||    
T  42473625 tttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaa 42473709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 35395455 - 35395356
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||| |||||||||||||||   |||||| || ||||||| ||||||||||| ||||  |||||||| ||||| ||  | ||||||||||    
T  35395455 tggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 35395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 7269446 - 7269532
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| || || ||||||| |||||||||| ||| | |||||||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtatta 7269532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27349296 - 27349178
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||||||||| ||  || |||||||||||||||||||||| |||||  |  ||||||  |||| |||| |||||||||||||||||| || ||| |||||    
T  27349296 catcactaacagactttttggacggagggaccattttgatagacgtgagagaaattcaaggacaaaatcgatatttcgcaaaatttgaggtcgattttgg 27349197  T
Q  101 ctgatttttgaaaattcaa 119  Q
     |||| |||| || |||||    
T  27349196 ttgatgtttgcaacttcaa 27349178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 38178082 - 38178175
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||  ||||||| ||||||| ||||||||||||||||  |||||| |  ||||||| ||||||||||| ||||  |||| |||||||    
T  38178082 ctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttg 38178175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 38205306 - 38205399
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||  ||||||| ||||||| ||||||||||||||||  |||||| |  ||||||| ||||||||||| ||||  |||| |||||||    
T  38205306 ctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttg 38205399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 15459191 - 15459271
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    |||||| ||||||||||||||||||||||||| |||||| || || ||||||  ||||||  ||||| |||||||| ||||    
T  15459191 tggacgaagggaccattttgatggacgtctgttaaattcaggaacaaaatagccatttcgataaattgggggacgattttg 15459271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 32134320 - 32134253
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| ||||||||||||||||||  |||||||    ||||||||||| ||||||||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaa 32134253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 35292371 - 35292450
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||| | |||||||||| ||| |||| |||||||||||  |||||| |||||||| | ||||||||||| ||||    
T  35292371 ctaacggagcatttggacggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataatt 35292450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 43318062 - 43318128
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||||||| |||| |||||||||||  |||||| |||||||| | ||||||||||| ||||    
T  43318062 tggacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataatt 43318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 28813765 - 28813814
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||| |||||||||||||||||||||||||||   |||||||||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggc 28813814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28819427 - 28819391
Alignment:
Q  1 catcactaacggagcttatggacggagggaccatttt 37  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28819427 catcactaacggagcttttggacggagggaccatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 38596980 - 38596908
Alignment:
Q  29 gaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||| |||||||||||||||   |||||| |||||||| | ||||||||||| ||||  ||||||||||||||    
T  38596980 gacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggc 38596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 2852975 - 2852889
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| || ||||| | ||||||||||||||||  |||||||| ||| | ||||||| |||||||||  ||| | |||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtatta 2852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 34328835 - 34328913
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||| |||||| ||||| ||||||||   ||||||||||| | |||||||||||||||||  ||| | |||||||||||    
T  34328835 ggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatta 34328913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 27077437 - 27077517
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggct 102  Q
    |||||||||||  |||||| ||| | ||  |||||| ||||  |||||||||||| | |||||||| ||||||||||||||    
T  27077437 acggagggaccgatttgattgacatttggtaaattcagggataaaatagatattttgaaaaatttgaggacgaatttggct 27077517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 53190766 - 53190900
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |    
T  53190766 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccg 53190865  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  53190866 attttttaaaattcaaggacgaatttgaggtatta 53190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 51684747 - 51684632
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||  |||| |||||||||||    
T  51684747 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctg 51684648  T
Q  104 atttttgaaaattcaa 119  Q
    ||||||||||||||||    
T  51684647 atttttgaaaattcaa 51684632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 27899088 - 27899222
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||| |    
T  27899088 cactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccg 27899187  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  27899188 attttttaaaattcaaggacgaatttgaggtatta 27899222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 21348860 - 21348745
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||| |    
T  21348860 cactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccg 21348761  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  21348760 attttttaaaattcaa 21348745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 54898575 - 54898440
Alignment:
Q  3 tcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggct 102  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| |     
T  54898575 tcactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgacc 54898476  T
Q  103 gatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||| |||||||||  ||| | |||||||||||    
T  54898475 gattttttaaaattcaaggacgaatttgaggtatta 54898440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 42279644 - 42279507
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||  | ||||||||  ||||    
T  42279644 cactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacgaattgagctg 42279545  T
Q  104 atttttgaaaattcaaatacggagttgaggtattactc 141  Q
    ||||||||||||||||  ||| | ||||||||||||||    
T  42279544 atttttgaaaattcaatgacgaatttgaggtattactc 42279507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 35905719 - 35905834
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| | |    
T  35905719 cactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccg 35905818  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  35905819 attttttaaaattcaa 35905834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 2226159 - 2226293
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| ||| || |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |    
T  2226159 cactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccg 2226258  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  2226259 attttttaaaattcaaggacgaatttgaggtatta 2226293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 43765274 - 43765140
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||  || ||||||||| | |    
T  43765274 cactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacgaatttgaccg 43765175  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||  ||| | |||||||||||    
T  43765174 atttttgaaaattcaaggacgaatttgaggtatta 43765140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 23293177 - 23293292
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||   || ||||||||||||    
T  23293177 cactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcgaatttggctg 23293276  T
Q  104 atttttgaaaattcaa 119  Q
    ||||||  ||||||||    
T  23293277 atttttcgaaattcaa 23293292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 2377166 - 2377032
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||||||||| | ||||||||| || ||| ||||||||  |||||||||||||       
T  2377166 cactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaatttggtca 2377067  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||| ||| | |||||||||||    
T  2377066 atttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 30599925 - 30600059
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||  ||||| |||||||| |    
T  30599925 cactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccg 30600024  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||| | |||||| ||  ||| | |||||||||||    
T  30600025 atttgtaaaaatttaaggacgaatttgaggtatta 30600059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 41977884 - 41977753
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||||| |||||  |||||| ||||||| ||||    
T  41977884 taacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgatt 41977785  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    ||| |||||||||  ||| | |||||||||||    
T  41977784 ttttaaaattcaaggacgaatttgaggtatta 41977753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 17515447 - 17515332
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||||| | || ||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  | || |||||||||      
T  17515447 cactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatgaatttggcca 17515348  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  17515347 atttttaaaaattcaa 17515332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 46112624 - 46112490
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||  ||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||     ||||||||||| |    
T  46112624 cactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatttggccg 46112525  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  46112524 attttttaaaattcaaggacgaatttgaggtatta 46112490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 46197860 - 46197762
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||||| ||| |||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||  | ||||||||||    
T  46197860 catcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacgaatttg 46197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 3152228 - 3152337
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||| ||| |||||||||||||   ||||||||||||||||||||||| |||||||| | ||||||||||||||||  |||| ||| ||||| ||||    
T  3152228 taacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatt 3152327  T
Q  107 tttgaaaatt 116  Q
    ||| ||||||    
T  3152328 tttcaaaatt 3152337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 2660334 - 2660234
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    ||||||||||||| | |||||||||||||||||||||||  ||||||| | ||||||||||||||||  |||||||| ||||  ||||||| ||||||||    
T  2660334 tggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattca 2660235  T
Q  119 a 119  Q
    |    
T  2660234 a 2660234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 48830813 - 48830887
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcg 78  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||    
T  48830813 cactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcg 48830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 51686402 - 51686480
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||  ||| | |||||||||||    
T  51686402 ggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtatta 51686480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 7884880 - 7884939
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggac 63  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  7884880 cactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 44794341 - 44794211
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||| ||| ||||||||||||| | |||||||||| |||| ||||||| |||||||| | ||||||||||||||||  |||| ||| ||||| || |    
T  44794341 taacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-t 44794243  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    ||| |||||||||  ||| | |||||||||||    
T  44794242 tttcaaaattcaaggacgaatttgaggtatta 44794211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 23291659 - 23291592
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| | |||||||||||||||||||||||||  |||||||||||||| ||||||| |||||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaa 23291592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 44276203 - 44276266
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaa 67  Q
    ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  44276203 cactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaaa 44276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 611222 - 611308
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| ||| |||||||| ||||||| ||||||  |||||||||||||||||||||| |||||||||  ||| | |||||||||||    
T  611222 aaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 611308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 7883417 - 7883323
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgatat 146  Q
    |||||| || ||||| | |||||||| |||||||| |||||||| ||||| ||||||| |||||||||| ||| | ||||||||||| |||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtcgatat 7883323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 23774268 - 23774174
Alignment:
Q  25 gagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||||  ||||||||||||||||  |||||| |||||||||| ||||||||||| ||||  |||||||||||||| || |  |||||||||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaa 23774174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 42282481 - 42282559
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||  |  ||||||||| |||||||||||||||||||  ||| | |||||||||||    
T  42282481 ggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 46308896 - 46308799
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgatattaa 149  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | ||||||||||| ||||| ||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcgattttaa 46308799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 48634012 - 48633919
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||   |||||||||||||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||   |||||||||||    
T  48634012 ctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttg 48633919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 19987602 - 19987692
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaa 95  Q
    |||||| || ||| |||||||||||||   |||||||||||| |||||||||  |||||||| | ||||||||||||||||  ||||||||    
T  19987602 actaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacgaa 19987692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 38193510 - 38193596
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 38193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 41979352 - 41979438
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 41979438  T

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Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 46310436 - 46310522
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||| | ||||||| |||||||||| ||| | |||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtatta 46310522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 48829437 - 48829359
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||||  || |  ||||||||||| ||||||||||||||  ||| | |||||||||||    
T  48829437 ggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtatta 48829359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 53094273 - 53094359
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 53094359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 23888761 - 23888873
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgat 105  Q
    |||||||||  | |||||||||||||| ||||||||||||| ||  |||||| ||||||||   ||||||||||| ||||  |||||||| ||||| ||     
T  23888761 ctaacggaggatttggacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgac 23888860  T
Q  106 ttttgaaaattca 118  Q
     | ||||||||||    
T  23888861 gtgtgaaaattca 23888873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 3150341 - 3150255
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||| | ||||||| |||||||||  ||| | |||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 3150255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 18430260 - 18430358
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    ||||||||||   |||||||||||||| ||||  ||||||||||  | |||| |||||||| | ||||||||||| ||||  |||| ||||||||||||    
T  18430260 ctaacggagcacttggacggagggacctttttattggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctga 18430358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 30598418 - 30598340
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||| |||||| ||||||||||||||  ||||| |||||| | |||||||||||||||||  ||| | |||||||||||    
T  30598418 ggacaaaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtatta 30598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 40508913 - 40508995
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||||||  ||||||||||||||||  ||||||  ||| ||| | ||||||||||| ||||  ||||||||||||||    
T  40508913 tggacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacgaatttggc 40508995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 44268062 - 44267984
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||| |||||| ||||||||||||||  | || ||||||||| |||||||||||||||||  ||| | |||||||||||    
T  44268062 ggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 44267984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 54900074 - 54900160
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| ||||| || | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 54900160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 600846 - 600805
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacg 45  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  600846 cactaacggagcttttagacggagggaccattttgatggacg 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 25535251 - 25535331
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||||  | |||| ||||||||||| |||||| |||||||| |  |||||||| |||||| |||| ||||||||    
T  25535251 tggacggagggatgaatttggtggacgtctgttaaattcagggactaacttaatatttcgaaaaattggggggcgaatttg 25535331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 33113184 - 33113248
Alignment:
Q  21 gacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||||| ||||||||||||||||  |||||  |||||||| | ||||||||||| ||||    
T  33113184 gacggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataatt 33113248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 31887441 - 31887520
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    ||||||||||   |||||||||||||| ||||||| ||| ||||  |||||| |||||||| | ||||||||||| ||||    
T  31887441 ctaacggagcacttggacggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataatt 31887520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 35903914 - 35903847
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||| | ||||||| ||||||||  |||| ||| ||||||||||||| |||||||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaa 35903847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 41021008 - 41021087
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| ||||||||||||||||  |||||| ||||  |||| || |||||||| ||||  ||||| ||||||||    
T  41021008 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggc 41021087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 53187831 - 53187764
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||| | ||||||| |||||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaa 53187764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 2378991 - 2379069
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||| ||||| ||||||||  |||||||| ||| | ||||||| |||||||||  ||| | |||||||||||    
T  2378991 ggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtatta 2379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2977313 - 2977431
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||| ||||||||||   ||| |||| ||||| ||||||||||||| ||  |||||  |||||| ||| ||||||||||| ||||  |||| ||||||||    
T  2977313 catcgctaacggagcacttgggcggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttgg 2977412  T
Q  101 ctgatttttgaaaattcaa 119  Q
    | ||||  | |||||||||    
T  2977413 ccgattcgtaaaaattcaa 2977431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 24846559 - 24846609
Alignment:
Q  65 aaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaat 115  Q
    ||||| ||||||||||||||||| ||||||||||  ||||||||| |||||    
T  24846559 aaatatatatttcgcaaaatttgaggacgaatttacctgatttttaaaaat 24846609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 38191984 - 38191898
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| |||||  |||||| |||||| ||  ||| | |||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtatta 38191898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 45898350 - 45898416
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||||||| ||||||| ||||||||  ||||||  ||||||| | ||||||||||| ||||    
T  45898350 tggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataatt 45898416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 46611303 - 46611389
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||| |  |||||| |||||||||  ||| | |||||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtatta 46611389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 53092712 - 53092626
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||| ||| | ||||||||||||||||  |||||||| |||||  |||||| |||||| ||| ||| | |||||||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtatta 53092626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 5133133 - 5133080
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattc 57  Q
    |||||||||||| | |||||||| |||| |||||||||||||| ||| ||||||    
T  5133133 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaattc 5133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 46114114 - 46114162
Alignment:
Q  61 gactaaatagatatttcgcaaaatttggggacgaatttggctgattttt 109  Q
    |||||||||||||||||||||||||   |||| |||||||| |||||||    
T  46114114 gactaaatagatatttcgcaaaattcaaggacaaatttggccgattttt 46114162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 39664755 - 39664889
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |    
T  39664755 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccg 39664854  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  39664855 attttttaaaattcaaggacgaatttgaggtatta 39664889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 40560360 - 40560226
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| || ||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  40560360 cactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctg 40560261  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||| ||| | |||| ||||||    
T  40560260 attttttaaaattcaaagacgaatttgaagtatta 40560226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 16763213 - 16763079
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| | |    
T  16763213 cactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccg 16763114  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  16763113 atttttaaaaattcaaggacgaatttgaggtatta 16763079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 44709752 - 44709886
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||| |    
T  44709752 cactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccg 44709851  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
     ||||| |||||||||  ||| | |||||||||||    
T  44709852 gttttttaaaattcaaggacgaatttgaggtatta 44709886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 14389092 - 14389225
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    ||||||| | ||| |||||||||||||||||||||||||| | || ||||||| |||||||||||||||||||||||||||  |||||||||||||| ||    
T  14389092 actaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga 14389191  T
Q  105 tttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||||||||  ||| | |||||||||||    
T  14389192 tttttgaaaattcaatgacgaatttgaggtatta 14389225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 19908253 - 19908388
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||  ||||| |||||||| |    
T  19908253 cactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccg 19908352  T
Q  104 a-tttttgaaaattcaaatacggagttgaggtatta 138  Q
    | ||||| |||||||||  ||| | |||||||||||    
T  19908353 atttttttaaaattcaaggacgaatttgaggtatta 19908388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 17696343 - 17696209
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||||||||||||||  |||||||  |||| ||||||||| |    
T  17696343 cactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccg 17696244  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||  ||| | |||||||||||    
T  17696243 atttttgaaaattcaaggacgaatttgaggtatta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 2767071 - 2766956
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||||| |||| | |    
T  2767071 cactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccg 2766972  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  2766971 atttttaaaaattcaa 2766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 6797641 - 6797526
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    |||| |||||| |||||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||||  || |||||||| ||  |||    
T  6797641 taacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaatt 6797542  T
Q  107 tttgaaaattcaaata 122  Q
    ||| ||||||||||||    
T  6797541 ttttaaaattcaaata 6797526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 16377204 - 16377299
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||  ||||| ||||||    
T  16377204 cactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggacaaatttg 16377299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 42519212 - 42519291
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaa 83  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  42519212 cactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaa 42519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 37645627 - 37645487
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||| |||| |||||||||||||||||||| ||||||||  || |||| |||||||  ||||||||||||||||||  |||||||  ||||||||| |     
T  37645627 catcaataacagagcttatggacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaattcga 37645528  T
Q  101 ctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    ||||||||| |||||||||  ||| ||||| ||||||||||    
T  37645527 ctgatttttaaaaattcaaggacgaagttggggtattactc 37645487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 39455306 - 39455225
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  39455306 cactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaatt 39455225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 31475079 - 31475169
Alignment:
Q  51 aaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    ||||||| |||| |||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||  ||| ||||||||||||||||    
T  31475079 aaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgaggtattactc 31475169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 37646477 - 37646567
Alignment:
Q  51 aaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||  ||| ||||| ||||||||||    
T  37646477 aaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaagttggggtattactc 37646567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 24208064 - 24208164
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||||||||||| |||||||| | ||||||||| | ||||  |||||||| ||||| ||||||| ||||||||    
T  24208064 tggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattca 24208163  T
Q  119 a 119  Q
    |    
T  24208164 a 24208164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17946234 - 17946117
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |  |  |||||| ||||| |||| ||||||| |||||||||  |||||| ||| |    
T  17946234 catcactaacggaccttttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacgattttag 17946135  T
Q  101 ctgatttttgaaaattca 118  Q
    |||||  ||| |||||||    
T  17946134 ctgatgcttgcaaattca 17946117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 6786003 - 6786103
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||||||||||| |||||||| | ||||||||  | ||||  |||||||| ||||| ||||||| ||||||||    
T  6786003 tggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaattca 6786102  T
Q  119 a 119  Q
    |    
T  6786103 a 6786103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 19581520 - 19581417
Alignment:
Q  35 tttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggt 134  Q
    |||||||||| | ||  ||||||  ||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||| ||  ||| | |||||||    
T  19581520 tttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggt 19581421  T
Q  135 atta 138  Q
    ||||    
T  19581420 atta 19581417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 19906771 - 19906704
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||| | ||||||| |||||||||    
T  19906771 aaattatgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaa 19906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7744183 - 7744085
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||| |  |  |||||| ||||| |||| ||||||||||||||||| | ||||| ||||    
T  7744183 catcactaacggaccttttggatggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaattttgagacgattttg 7744085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 16376825 - 16376739
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||||| ||||||| ||||||  |||||||||||| | ||||||| |||||||||| ||| | |||||||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 16376739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 162085 - 162142
Alignment:
Q  62 actaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||||||||||||| | ||||||||||| |||||||| |||||||||||||||||||    
T  162085 actaaatagatattttgtaaaatttggggtcgaatttgactgatttttgaaaattcaa 162142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 11315337 - 11315424
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    |||||||||||||||||||||||||||||||  |||||| || ||||  | |||||||||  ||||| ||| ||||||||||| ||||    
T  11315337 tggacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgatt 11315424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 37417408 - 37417313
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||   |||||| ||||||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||  |||| |||||||||    
T  37417408 ctaacggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggc 37417313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 29909662 - 29909728
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||||||| ||||||||||||||||  |||||  |||||||||| ||||||||||| ||||    
T  29909662 tggacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataatt 29909728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 15372618 - 15372539
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||||| ||||||| ||| ||||  ||| ||||||||||    
T  15372618 acggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggc 15372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 34400395 - 34400336
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||| |||||| ||||||||||||||  |||| ||||||||| |||||||||||||||||    
T  34400395 ggacaaaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaa 34400336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 39663243 - 39663176
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||||||| ||||| ||||||||  |||||||||||| | ||||||| |||||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaa 39663176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 39678 - 39596
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||||||| |||| || |||| |||  |||||| |||| ||||| ||||||||||| ||||  ||||||||||||||    
T  39678 tggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcgcataattgagggacgaatttggc 39596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 14387438 - 14387352
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||| ||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 14387352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 16764611 - 16764697
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||| | |||||||||  ||| | |||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtatta 16764697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 17948937 - 17948995
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  17948937 ggacgaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattca 17948995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 41706658 - 41706581
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||| |||||||||||||  |  |||||| |||| ||||| ||||||||||| ||||  ||||||||||||    
T  41706658 acggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttg 41706581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 7745287 - 7745327
Alignment:
Q  65 aaatagatatttcgcaaaatttggggacgaatttggctgat 105  Q
    |||| ||||||||||||||||||||||||| ||||||||||    
T  7745287 aaattgatatttcgcaaaatttggggacgattttggctgat 7745327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 37020630 - 37020530
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||| ||||||| |||||||| | ||||||||  ||||||   |||| || ||| | ||||||| ||||||||    
T  37020630 tggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggacaaaattgaccgatttttcaaaattca 37020531  T
Q  119 a 119  Q
    |    
T  37020530 a 37020530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 40561878 - 40561970
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgat 144  Q
    |||||| |||||||| | | |||||| |||||||  | |||||| ||||| ||||||| |||||||||| ||| | ||||||||||| |||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtcgat 40561970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 39399 - 39465
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    ||||||| |||||| |||||||| |||||||  |||||| |||||||| | ||||||||||| ||||    
T  39399 tggacggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcgcataatt 39465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 11023000 - 11023097
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| |||||||||||||    ||||||||||||    |||||| |||||||  | |||||||||  ||||| |||||||||||||||    
T  11023000 cactaacggaccttttggacggagggacggaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggc 11023097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 15432435 - 15432370
Alignment:
Q  34 ttttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||||||||  |||||| | |||||||| ||||||||||| ||||  |||| |||||||    
T  15432435 ttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttg 15432370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 28246800 - 28246703
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||| ||||||| |  ||||||||||||    |||||| || ||||  | |||||||||  |||||||||||||||||||||    
T  28246800 cactaacggaccttttggacagagggacgaaattgatggacgtcaaacaaattcaggaactattttgatatttcgttaaatttggggacgaatttggc 28246703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 2869716 - 2869582
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||  |||||||||||| | |    
T  2869716 cactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccg 2869617  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||  ||| | |||||||||||    
T  2869616 atttttgaaaattcaaggacgaatttgaggtatta 2869582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 50556084 - 50556218
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||  | |||||||||| |||    
T  50556084 cactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatttgactg 50556183  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||| ||| | ||||| |||||    
T  50556184 attttttaaaattcaaagacgaatttgagatatta 50556218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 4855956 - 4856087
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||  |||||| ||||||| ||||    
T  4855956 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgatt 4856055  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    ||| |||||||||  ||| | |||||||||||    
T  4856056 ttttaaaattcaaggacgaatttgaggtatta 4856087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 25278355 - 25278498
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||||  |||||||||||| | |    
T  25278355 cactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccg 25278454  T
Q  104 atttttgaaaattcaaatacggagttgaggtattactcgatatt 147  Q
    |||||| |||||||||  ||| | ||||||||||| || |||||    
T  25278455 attttttaaaattcaaggacgaatttgaggtattagtcaatatt 25278498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 31238482 - 31238597
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||| |    
T  31238482 cactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccg 31238581  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  31238582 attttttaaaattcaa 31238597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 6818665 - 6818799
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||   ||||||| |||||| |    
T  6818665 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggccg 6818764  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  6818765 attttttaaaattcaaggacgaatttgaggtatta 6818799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 34778125 - 34778259
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||  |||||| ||||||| |    
T  34778125 cactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccg 34778224  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  34778225 attttttaaaattcaaggacgaatttgaggtatta 34778259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 51896139 - 51896271
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| |||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||| |||||| |||    
T  51896139 cactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgactg 51896238  T
Q  104 atttttgaaaattcaaatacggagttgaggtat 136  Q
    |||||| |||||| ||  ||||| |||||||||    
T  51896239 attttttaaaatttaaggacggatttgaggtat 51896271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 37344479 - 37344345
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||  |||||||||||| | |    
T  37344479 cactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccg 37344380  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  37344379 attttttaaaattcaaggacgaatttgaggtatta 37344345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 15104578 - 15104477
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || |||||||||||||    
T  15104578 cactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaatttggctg 15104479  T
Q  104 at 105  Q
    ||    
T  15104478 at 15104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 138
Target Start/End: Original strand, 25278975 - 25279074
Alignment:
Q  39 atggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||  ||| | |||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 25279074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 27087420 - 27087286
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||||| || |||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||| |||||| | |    
T  27087420 cactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgaccg 27087321  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||| ||  ||| | |||||||||||    
T  27087320 attttttaaaatttaaggacgaatttgaggtatta 27087286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 3013457 - 3013597
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatg------gacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatt 97  Q
    |||||||||||||| ||||||||||||| |||||||||      |||||||||||||||| |||||||||||||||||||||||||||   |||||||||    
T  3013457 cactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatt 3013556  T
Q  98 tggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    || ||||| ||| |||||||||  ||| | |||||||||||    
T  3013557 tgactgatgttttaaaattcaaggacgaatttgaggtatta 3013597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 46583546 - 46583677
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||| ||| ||||||||||||| | ||||||||||||||||||||||| |||||||| | ||||||||||||||||  ||||| || ||| | ||||    
T  46583546 taacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatt 46583645  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    ||| |||||||||  ||| | |||||||||||    
T  46583646 tttcaaaattcaaggacgaatttgaggtatta 46583677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 33602632 - 33602770
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    ||||||||| ||| ||||||||||||| | ||||| ||||||||||||||||| |||||||| | |||||||| |||||||  |||||||| ||| | ||    
T  33602632 actaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccga 33602731  T
Q  105 tttttgaaaattcaaatacggagttgaggtattactcga 143  Q
    ||||| |||||||||  ||| | ||||||||||| ||||    
T  33602732 tttttcaaaattcaaggacgaatttgaggtattaatcga 33602770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 9121670 - 9121770
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||| ||||||| |||||||| | ||||||||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  9121670 tggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattca 9121769  T
Q  119 a 119  Q
    |    
T  9121770 a 9121770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 51122045 - 51121927
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||  |  |||||| ||||| |||| ||||||| |||||||||||| ||||  ||||    
T  51122045 catcactaacagaccttttggacggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatttgggaacgatgttgg 51121946  T
Q  101 ctgatttttgaaaattcaa 119  Q
    |||||  ||| ||||||||    
T  51121945 ctgatgcttgcaaattcaa 51121927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 52641969 - 52641891
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||  ||| | |||||||||||    
T  52641969 ggactaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 52641891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 52643607 - 52643736
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||| |||||| |     ||||| | |||||||| ||||||||||| |||||||||||||||  |||||||||||  |||    
T  52643607 cactaacggagcttttggacggagagaccatct-----gacgtttataaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactg 52643701  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||| ||  ||| | |||||||||||    
T  52643702 atttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 25278934 - 25278876
Alignment:
Q  61 gactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaa 25278876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 47013084 - 47013184
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   |||||||||||| || ||||||| |||||||| | ||||||||| ||||||  |||||||| ||| | ||||||| ||||||||    
T  47013084 tggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattca 47013183  T
Q  119 a 119  Q
    |    
T  47013184 a 47013184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 42134617 - 42134538
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    ||||||||||   |||||||||||||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||    
T  42134617 ctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 42134538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 3011944 - 3011858
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| | |||||||||||||||||||||||||  || ||||||||| ||||||||| |||||| ||  ||| | |||||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 31236908 - 31236822
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| || ||||||||||||||||||||||||  ||||| |||||| | ||||||| |||||||||  ||| | |||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 31236822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 27940727 - 27940650
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||| ||||||||||||||||  ||||||  ||| ||||| ||||||||||| ||||  ||||||||||||    
T  27940727 acggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttg 27940650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 34776658 - 34776566
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgat 144  Q
    |||||| |||||||| | ||||||||| ||||||  |||||||| ||||| ||||||| |||||||||  ||| | ||||||||||| |||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcgat 34776566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 36895499 - 36895578
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    ||||||||||   |||||| ||||||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||    
T  36895499 ctaacggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 36895578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 46582099 - 46582032
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||||| ||||||| |||||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 46582032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 26223676 - 26223590
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| ||| | ||||||| |||||||||  ||| | |||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 26223590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 8168029 - 8167945
Alignment:
Q  54 attctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||| |||||||| | ||||||||||||||||  | |||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 8167945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 35479977 - 35480077
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||| ||||| ||||||||||||||||  ||||||   || ||| | ||||||||||| ||||  |||| |||||||||||||   ||||||||||    
T  35479977 tggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattca 35480076  T
Q  119 a 119  Q
    |    
T  35480077 a 35480077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 37088144 - 37088203
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||| |||||| ||||||||||||||  || ||||||||||| ||||||| |||||||||    
T  37088144 ggacaaaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaa 37088203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 46638796 - 46638875
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    ||||||||||   |||||||||||||| ||||| ||||||||||  ||||||  ||||||| | ||||||||||| ||||    
T  46638796 ctaacggagcacttggacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataatt 46638875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 2871089 - 2871143
Alignment:
Q  65 aaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaa 119  Q
    |||||| ||||||||||||||  ||||||||||| || ||||||| |||||||||    
T  2871089 aaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaa 2871143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 8169568 - 8169654
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||| | ||||||  |||||||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 8169654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 25276831 - 25276745
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||   ||| ||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 25276745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 37345962 - 37346048
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||| ||| ||||  ||||||| |||||||||  ||| | |||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtatta 37346048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 50554252 - 50554166
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| || ||||||||| |||||  |||||||  |||||||||||| | ||||||| |||||||||  ||| | |||||||||||    
T  50554252 aaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 50554166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31801768 - 31801679
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaa 95  Q
    ||||||||||   |||||||||||||| |||||||||||||||   |||||   ||||||| | ||||||||||| ||||  ||||||||    
T  31801768 ctaacggagcacttggacggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacgaa 31801679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 45380973 - 45381066
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    ||||||||||   |||||||||| ||| ||||||||||||||||  ||||||  | ||||| | ||||||||||| ||||  |||| |||||||    
T  45380973 ctaacggagcacttggacggaggaacctttttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgagggatgaatttg 45381066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 6899622 - 6899507
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||||| | |||||||||| |||    
T  6899622 cactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatttgactg 6899523  T
Q  104 atttttgaaaattcaa 119  Q
    ||||||||||||||||    
T  6899522 atttttgaaaattcaa 6899507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 32439079 - 32439193
Alignment:
Q  5 actaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctga 104  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| | ||    
T  32439079 actaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 32439178  T
Q  105 tttttgaaaattcaa 119  Q
    ||||| |||||||||    
T  32439179 ttttttaaaattcaa 32439193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 20523503 - 20523390
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||| | |    
T  20523503 cactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccg 20523404  T
Q  104 atttttgaaaattc 117  Q
    ||||||||||||||    
T  20523403 atttttgaaaattc 20523390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 10568536 - 10568421
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||||| |||||   ||||||||||| |||    
T  10568536 cactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactg 10568437  T
Q  104 atttttgaaaattcaa 119  Q
    ||||||||||||||||    
T  10568436 atttttgaaaattcaa 10568421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 7372945 - 7373079
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||  |||||||||||| |      
T  7372945 cactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaatttgacca 7373044  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  7373045 atttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 14338459 - 14338577
Alignment:
Q  1 catcactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||| ||||  || |||| ||||||||||||||| ||||||||||||    
T  14338459 catcagtaacggagcttttgaacggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttgg 14338558  T
Q  101 ctgatttttgaaaattcaa 119  Q
    ||||||||| |||||||||    
T  14338559 ctgatttttaaaaattcaa 14338577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 13613569 - 13613684
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||| ||| ||| ||||||||||||| | ||||||||||||||||||||||| |||||||| | ||||||||||||||||  |||||||||||| | |    
T  13613569 cactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccg 13613668  T
Q  104 atttttgaaaattcaa 119  Q
    |||||| |||||||||    
T  13613669 atttttcaaaattcaa 13613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 32517014 - 32516880
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||||||||  || |||||||| ||||| | ||||||  |||||||||||| | |    
T  32517014 cactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaatttgaccg 32516915  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  32516914 attttttaaaattcaaggacgaatttgaggtatta 32516880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 9398797 - 9398716
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatt 85  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  9398797 cactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaatt 9398716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 11355359 - 11355225
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    ||||| |||||||| |||||||||||||||||||| ||| |||||||||||||| |||| | ||||||||||||  ||||||  | |||||||||| | |    
T  11355359 cactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaatttgaccg 11355260  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  11355259 attttttaaaattcaaggacgaatttgaggtatta 11355225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 21068706 - 21068623
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcga 143  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||  ||| | ||||||||||||||||    
T  21068706 ggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtattactcga 21068623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 3456870 - 3456770
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||| ||||||| |||||||| | ||||||||| ||||||  |||||||| ||||| ||||||| ||||||||    
T  3456870 tggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattca 3456771  T
Q  119 a 119  Q
    |    
T  3456770 a 3456770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 7049890 - 7049835
Alignment:
Q  8 aacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggac 63  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  7049890 aacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7049835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 6902906 - 6902983
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||  ||| | |||||||||||    
T  6902906 ggactaaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 6902983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 9400035 - 9400133
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgatattaat 150  Q
    |||||| |||||||| ||||||||||||||||||   ||| ||||||| ||||||||| |||||||||  ||| | ||||||||||| ||||| |||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtcgattttaat 9400133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 10569927 - 10570005
Alignment:
Q  60 ggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||| ||||||||   ||||||||||||||||||||| |||||||||  ||| | |||||||||||    
T  10569927 ggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 10570005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 7051255 - 7051331
Alignment:
Q  62 actaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||||||||||||  | |||||||||| ||||||||| ||||||||||| || | || ||||||||    
T  7051255 actaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtatta 7051331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 8605351 - 8605411
Alignment:
Q  78 gcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||| | |||||||||||    
T  8605351 gcaaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 8605411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 32455893 - 32455993
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    |||||||||||||   ||||||||||||||| ||||||| | |||||| | ||||||||| ||||||  |||||||| ||| | ||||||| ||||||||    
T  32455893 tggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattca 32455992  T
Q  119 a 119  Q
    |    
T  32455993 a 32455993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 3018421 - 3018516
Alignment:
Q  6 ctaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||   |||| ||||||||| ||||||||||||||||  |||||| |||||||| | ||||||||||| ||||  |||||||| |||||    
T  3018421 ctaacggagcacttggatggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggc 3018516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 33276879 - 33276800
Alignment:
Q  63 ctaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcg 142  Q
    |||||||||||||||||||||||| |  ||||||||| ||||||||| |||||||||  ||| ||||||| |||| ||||    
T  33276879 ctaaatagatatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaaggacgaagttgagttatttctcg 33276800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 2968258 - 2968180
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttgg 100  Q
    ||||| ||||| ||||||||||||||||  |||||| |||| ||||| ||||||||||| ||||  |||||||||||||    
T  2968258 acggatggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgg 2968180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 7371244 - 7371178
Alignment:
Q  72 tatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||||  ||| |||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtatta 7371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 17952029 - 17952126
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    |||||||||| ||| ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||||||||||||||||    
T  17952029 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 17952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 4641474 - 4641395
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| |||||||||| |||||  |||||| |||| ||||| |||||||| || ||||  ||||||||||||||    
T  4641474 acggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggc 4641395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 21045399 - 21045353
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaattt 98  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||||    
T  21045399 aaattcggggactaaatagatatttcgtaaaatttgtggacgaattt 21045353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 32518497 - 32518583
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||| | ||||||||||||||||  |||| ||| ||||| ||||||| |||||||||  ||| | |||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 32518583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 119
Target Start/End: Complemental strand, 7049839 - 7049808
Alignment:
Q  88 gggacgaatttggctgatttttgaaaattcaa 119  Q
    ||||||||||||||||||||||||||||||||    
T  7049839 gggacgaatttggctgatttttgaaaattcaa 7049808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 29077447 - 29077368
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| ||||||||||||||||  |||||| ||||  |||| || |||||||| ||||  ||||| ||||||||    
T  29077447 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggc 29077368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 29112419 - 29112340
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| ||||||||||||||||  |||||| ||||  |||| || |||||||| ||||  ||||| ||||||||    
T  29112419 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggc 29112340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 33267150 - 33267103
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttg 99  Q
    |||||| || |||||||||||||||||||||||||| | |||||||||    
T  33267150 aaattcgggaactaaatagatatttcgcaaaatttgagaacgaatttg 33267103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 21091153 - 21091104
Alignment:
Q  94 aatttggctgatttttgaaaattcaaatacggagttgaggtattactcga 143  Q
    ||||||| ||||||||||||||||||  ||| | ||||||||||||||||    
T  21091153 aatttggttgatttttgaaaattcaaggacgaatttgaggtattactcga 21091104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 35175865 - 35175965
Alignment:
Q  19 tggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    ||||||||||||| |  ||||||||||||    |||||| |||||||  | |||||||||  |||||||| |||||||||||| |||   ||||||||||    
T  35175865 tggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaattca 35175964  T
Q  119 a 119  Q
    |    
T  35175965 a 35175965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 1400 - 1266
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||   ||||||||||  |      
T  1400 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaatttaacca 1301  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||||| |||||||||||    
T  1300 attttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 3428 - 3297
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||| ||| ||||||||||||| | ||||||||||||||||||||||| |||||||| | ||||||||||||||||  ||||| || ||||| ||||    
T  3428 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatt 3329  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    ||| |||||||||  ||| | |||||||||||    
T  3328 tttcaaaattcaaggacgaatttgaggtatta 3297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 4600 - 4469
Alignment:
Q  7 taacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatt 106  Q
    ||||||| ||| ||||||||||||| | ||||||||||||||||||||||| |||||||| | ||||||||||||||||  ||||| || ||||| ||||    
T  4600 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatt 4501  T
Q  107 tttgaaaattcaaatacggagttgaggtatta 138  Q
    ||| |||||||||  ||| | |||||||||||    
T  4500 tttcaaaattcaaggacgaatttgaggtatta 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 14343 - 14441
Alignment:
Q  52 aaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactcgatattaat 150  Q
    |||||| |||||||| | ||||||||||||||||  |||||||| || || ||||||| |||||||||  ||| | ||||||||||| || ||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcaatattaat 14441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 8397 - 8265
Alignment:
Q  4 cactaacggagcttatggacggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggctg 103  Q
    |||||||| ||||| |||||||| | ||||||||||||||||| |  ||||||| |||||||||||||||||| ||||||||   | |||||||||||      
T  8397 cactaacgaagcttttggacggatgtaccattttgatggacgtat--aaaattcagggactaaatagatattttgcaaaattcaagaacgaatttggcca 8300  T
Q  104 atttttgaaaattcaaatacggagttgaggtatta 138  Q
    |||||| |||||||||  ||| | |||||||||||    
T  8299 attttttaaaattcaaggacgaatttgaggtatta 8265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 436341 - 436265
Alignment:
Q  65 aaatagatatttcgcaaaatttggggacgaatttggctgatttttgaaaattcaaatacggagttgaggtattactc 141  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||  ||| | ||||||| ||||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggtgttactc 436265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 6639 - 6718
Alignment:
Q  22 acggagggaccattttgatggacgtctgtaaaattctgggactaaatagatatttcgcaaaatttggggacgaatttggc 101  Q
    ||||||||||| |||||||||| |||||  |||||| |||| ||||| |||||||| || ||||  ||||||||||||||    
T  6639 acggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggc 6718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 38298 - 38346
Alignment:
Q  70 gatatttcgcaaaatttggggacgaatttggctgatttttgaaaattca 118  Q
    ||||||||||||||||||||||||| ||||| ||||  ||| |||||||    
T  38298 gatatttcgcaaaatttggggacgattttggttgatgcttgcaaattca 38346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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