View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0613_low_6 (Length: 415)

Name: NF0613_low_6
Description: NF0613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0613_low_6
NF0613_low_6
[»] chr4 (49 HSPs)
chr4 (29-407)||(7970489-7970869)
chr4 (330-407)||(2234218-2234295)
chr4 (326-375)||(3712519-3712568)
chr4 (326-389)||(35723394-35723458)
chr4 (316-398)||(15029743-15029824)
chr4 (312-366)||(35952613-35952667)
chr4 (305-389)||(36635310-36635395)
chr4 (331-395)||(21945483-21945547)
chr4 (331-398)||(14465090-14465157)
chr4 (305-375)||(56257933-56258001)
chr4 (329-375)||(8423731-8423777)
chr4 (312-366)||(15659756-15659810)
chr4 (328-390)||(21539879-21539941)
chr4 (326-384)||(40613441-40613499)
chr4 (312-365)||(18576033-18576086)
chr4 (326-375)||(22440610-22440659)
chr4 (328-389)||(37698698-37698759)
chr4 (326-366)||(903931-903971)
chr4 (326-366)||(44081587-44081627)
chr4 (326-374)||(44796972-44797020)
chr4 (327-366)||(7214533-7214572)
chr4 (201-232)||(7682071-7682102)
chr4 (326-361)||(8402752-8402787)
chr4 (312-395)||(19482648-19482731)
chr4 (328-375)||(46715486-46715533)
chr4 (326-389)||(56488520-56488583)
chr4 (312-366)||(5775354-5775408)
chr4 (329-383)||(6273936-6273990)
chr4 (317-367)||(9996848-9996898)
chr4 (305-407)||(12895105-12895206)
chr4 (317-371)||(33950140-33950194)
chr4 (312-366)||(40742600-40742654)
chr4 (316-366)||(49659523-49659573)
chr4 (326-375)||(999358-999407)
chr4 (326-395)||(13783261-13783330)
chr4 (326-375)||(18513251-18513300)
chr4 (329-366)||(19230322-19230359)
chr4 (312-373)||(30982874-30982935)
chr4 (331-395)||(847931-847995)
chr4 (318-366)||(10013913-10013961)
chr4 (318-366)||(10021054-10021102)
chr4 (334-366)||(12077837-12077869)
chr4 (330-374)||(16189710-16189754)
chr4 (334-366)||(24613719-24613751)
chr4 (310-366)||(30838219-30838275)
chr4 (312-355)||(32915601-32915645)
chr4 (327-395)||(40179647-40179715)
chr4 (326-366)||(40224541-40224581)
chr4 (326-366)||(40774290-40774330)
[»] chr1 (70 HSPs)
chr1 (310-389)||(6427336-6427415)
chr1 (311-395)||(7918206-7918290)
chr1 (271-395)||(9709800-9709918)
chr1 (329-397)||(36878439-36878507)
chr1 (316-395)||(8842714-8842793)
chr1 (305-395)||(1486698-1486788)
chr1 (312-375)||(38503320-38503383)
chr1 (306-375)||(20157340-20157409)
chr1 (312-365)||(44482240-44482293)
chr1 (327-395)||(5898277-5898345)
chr1 (331-395)||(5927355-5927419)
chr1 (313-377)||(34371712-34371775)
chr1 (335-394)||(2896140-2896199)
chr1 (312-375)||(9629896-9629959)
chr1 (326-389)||(17831541-17831604)
chr1 (314-397)||(18556454-18556537)
chr1 (316-375)||(40181871-40181930)
chr1 (317-395)||(16927186-16927264)
chr1 (316-378)||(22781439-22781501)
chr1 (317-395)||(27471567-27471645)
chr1 (331-389)||(28273103-28273161)
chr1 (331-397)||(46348398-46348464)
chr1 (313-386)||(48148034-48148108)
chr1 (349-398)||(9690305-9690354)
chr1 (326-375)||(17425103-17425152)
chr1 (326-375)||(25098565-25098614)
chr1 (312-365)||(25361896-25361949)
chr1 (326-383)||(30847730-30847787)
chr1 (326-366)||(1864890-1864930)
chr1 (310-374)||(36905998-36906062)
chr1 (312-395)||(5376496-5376579)
chr1 (312-375)||(9828044-9828107)
chr1 (313-388)||(10572586-10572661)
chr1 (316-375)||(13436458-13436517)
chr1 (316-383)||(14332642-14332709)
chr1 (328-395)||(15641042-15641109)
chr1 (326-365)||(19324572-19324611)
chr1 (317-388)||(19562622-19562693)
chr1 (306-345)||(31511970-31512009)
chr1 (331-398)||(38078676-38078743)
chr1 (327-394)||(41510895-41510962)
chr1 (316-395)||(52903229-52903308)
chr1 (315-365)||(2283676-2283726)
chr1 (312-395)||(5944261-5944346)
chr1 (317-395)||(23636050-23636128)
chr1 (329-375)||(34298436-34298482)
chr1 (327-389)||(41500717-41500779)
chr1 (312-385)||(113289-113362)
chr1 (331-388)||(1262871-1262928)
chr1 (317-398)||(6415002-6415083)
chr1 (326-375)||(12443470-12443519)
chr1 (326-391)||(13997867-13997932)
chr1 (312-374)||(19909298-19909364)
chr1 (312-389)||(24577182-24577259)
chr1 (330-395)||(25452162-25452227)
chr1 (306-375)||(33940310-33940379)
chr1 (305-366)||(34712372-34712433)
chr1 (329-366)||(40747786-40747823)
chr1 (317-366)||(41017405-41017454)
chr1 (330-366)||(2288181-2288217)
chr1 (326-366)||(10233262-10233302)
chr1 (318-366)||(12707875-12707923)
chr1 (318-366)||(12713329-12713377)
chr1 (318-366)||(12717420-12717468)
chr1 (326-366)||(16164325-16164365)
chr1 (343-383)||(23653346-23653386)
chr1 (326-366)||(23804437-23804477)
chr1 (316-388)||(29163381-29163453)
chr1 (274-310)||(32461392-32461428)
chr1 (331-395)||(41877485-41877549)
[»] chr5 (53 HSPs)
chr5 (310-389)||(3966489-3966568)
chr5 (305-397)||(39205858-39205950)
chr5 (326-396)||(27144442-27144512)
chr5 (326-384)||(32630745-32630803)
chr5 (313-377)||(6471886-6471950)
chr5 (305-393)||(38749552-38749640)
chr5 (312-395)||(6035463-6035545)
chr5 (312-375)||(32766939-32767002)
chr5 (315-389)||(11685925-11685999)
chr5 (316-389)||(26312755-26312828)
chr5 (305-398)||(31084301-31084393)
chr5 (306-398)||(2436900-2436991)
chr5 (312-388)||(18592060-18592136)
chr5 (331-395)||(21191071-21191135)
chr5 (326-366)||(23012418-23012458)
chr5 (275-366)||(10298578-10298669)
chr5 (316-395)||(16203795-16203874)
chr5 (312-395)||(22423808-22423891)
chr5 (316-374)||(30502388-30502446)
chr5 (316-374)||(30542731-30542789)
chr5 (329-366)||(30098335-30098372)
chr5 (313-374)||(36838544-36838605)
chr5 (328-392)||(12927637-12927701)
chr5 (315-375)||(28296328-28296388)
chr5 (316-384)||(28588674-28588742)
chr5 (311-375)||(41091252-41091316)
chr5 (331-395)||(41995451-41995515)
chr5 (305-397)||(43001778-43001870)
chr5 (326-389)||(12264839-12264902)
chr5 (317-364)||(15086482-15086529)
chr5 (331-366)||(15405070-15405105)
chr5 (326-389)||(19737492-19737555)
chr5 (326-373)||(34879352-34879399)
chr5 (323-365)||(10022642-10022684)
chr5 (310-372)||(17593716-17593778)
chr5 (316-366)||(17925172-17925222)
chr5 (326-364)||(24273040-24273078)
chr5 (326-364)||(24389136-24389174)
chr5 (341-395)||(26716124-26716178)
chr5 (341-395)||(26985864-26985918)
chr5 (334-395)||(9449449-9449510)
chr5 (329-366)||(25863213-25863250)
chr5 (306-363)||(41558644-41558701)
chr5 (316-357)||(42029770-42029811)
chr5 (326-395)||(42488063-42488132)
chr5 (351-395)||(5873548-5873592)
chr5 (331-395)||(6326312-6326376)
chr5 (310-394)||(19579682-19579766)
chr5 (347-395)||(19820425-19820473)
chr5 (331-375)||(27932235-27932279)
chr5 (335-395)||(32428945-32429005)
chr5 (326-366)||(33035811-33035851)
chr5 (310-366)||(35017046-35017102)
[»] chr2 (41 HSPs)
chr2 (275-395)||(21616742-21616864)
chr2 (326-395)||(37411254-37411323)
chr2 (313-377)||(44860318-44860382)
chr2 (317-392)||(18276504-18276579)
chr2 (275-395)||(20539632-20539753)
chr2 (330-395)||(21782832-21782897)
chr2 (326-395)||(23718006-23718075)
chr2 (326-395)||(24105678-24105747)
chr2 (316-372)||(34691805-34691861)
chr2 (316-372)||(34714217-34714273)
chr2 (312-375)||(24975321-24975384)
chr2 (325-375)||(28677909-28677959)
chr2 (312-366)||(30527591-30527645)
chr2 (331-397)||(37558955-37559021)
chr2 (330-395)||(16069268-16069333)
chr2 (331-395)||(12940950-12941014)
chr2 (331-395)||(20473302-20473366)
chr2 (335-375)||(27084262-27084302)
chr2 (312-360)||(35056883-35056931)
chr2 (330-393)||(4332908-4332971)
chr2 (311-366)||(18622615-18622670)
chr2 (326-389)||(31808063-31808126)
chr2 (326-388)||(896198-896260)
chr2 (316-366)||(5367201-5367251)
chr2 (312-366)||(18420430-18420484)
chr2 (332-366)||(22084848-22084882)
chr2 (326-371)||(22556964-22557010)
chr2 (333-395)||(23354669-23354731)
chr2 (330-375)||(1327978-1328023)
chr2 (342-395)||(23355021-23355074)
chr2 (312-389)||(29970545-29970622)
chr2 (310-367)||(33861935-33861992)
chr2 (326-395)||(35449493-35449562)
chr2 (318-366)||(2415326-2415374)
chr2 (311-355)||(17070936-17070980)
chr2 (326-366)||(18570981-18571021)
chr2 (326-366)||(19613623-19613663)
chr2 (318-366)||(28121551-28121599)
chr2 (326-366)||(30471047-30471087)
chr2 (326-366)||(39279684-39279724)
chr2 (326-366)||(44605149-44605189)
[»] chr3 (44 HSPs)
chr3 (277-395)||(25948848-25948966)
chr3 (316-395)||(8383237-8383316)
chr3 (312-374)||(8039831-8039893)
chr3 (305-395)||(5441022-5441110)
chr3 (329-395)||(34307793-34307859)
chr3 (327-376)||(9624640-9624689)
chr3 (327-388)||(15812832-15812893)
chr3 (328-389)||(29112292-29112353)
chr3 (310-366)||(16789021-16789077)
chr3 (316-375)||(7928450-7928509)
chr3 (312-375)||(11313796-11313859)
chr3 (312-375)||(16192746-16192809)
chr3 (313-395)||(10455770-10455852)
chr3 (316-366)||(21419455-21419505)
chr3 (320-366)||(23184076-23184122)
chr3 (326-384)||(32804550-32804608)
chr3 (317-366)||(40150572-40150621)
chr3 (326-366)||(29508453-29508493)
chr3 (328-395)||(4469830-4469897)
chr3 (328-375)||(10690274-10690321)
chr3 (312-395)||(14829670-14829752)
chr3 (313-364)||(15314873-15314924)
chr3 (326-389)||(49505164-49505227)
chr3 (312-383)||(49651782-49651853)
chr3 (329-375)||(5407260-5407306)
chr3 (329-375)||(23870572-23870618)
chr3 (309-355)||(47775745-47775791)
chr3 (316-366)||(48353731-48353781)
chr3 (316-365)||(8789550-8789599)
chr3 (326-375)||(12704007-12704056)
chr3 (316-357)||(13414487-13414528)
chr3 (329-366)||(17005632-17005669)
chr3 (332-397)||(21720742-21720807)
chr3 (332-365)||(27764716-27764749)
chr3 (357-398)||(33359738-33359779)
chr3 (316-357)||(35222956-35222997)
chr3 (318-366)||(3587335-3587383)
chr3 (349-397)||(6525713-6525761)
chr3 (312-388)||(9800027-9800103)
chr3 (330-366)||(11251987-11252023)
chr3 (327-375)||(11493372-11493420)
chr3 (332-364)||(12704056-12704088)
chr3 (331-395)||(15796309-15796373)
chr3 (326-366)||(48202279-48202319)
[»] chr7 (57 HSPs)
chr7 (326-395)||(3520352-3520421)
chr7 (312-395)||(22602706-22602789)
chr7 (312-389)||(32308106-32308183)
chr7 (313-397)||(25791631-25791714)
chr7 (312-395)||(5235966-5236049)
chr7 (312-395)||(15902802-15902885)
chr7 (316-395)||(20549771-20549850)
chr7 (326-389)||(42720900-42720963)
chr7 (306-380)||(5548671-5548745)
chr7 (313-366)||(35297669-35297722)
chr7 (312-364)||(17307904-17307956)
chr7 (326-394)||(22868023-22868091)
chr7 (311-395)||(27945021-27945105)
chr7 (295-366)||(16341505-16341576)
chr7 (312-395)||(26329378-26329461)
chr7 (317-375)||(19206050-19206108)
chr7 (317-395)||(22484005-22484083)
chr7 (325-375)||(29787378-29787428)
chr7 (313-390)||(6630909-6630986)
chr7 (331-388)||(7438693-7438750)
chr7 (312-377)||(8160414-8160479)
chr7 (305-366)||(11890908-11890969)
chr7 (307-395)||(21138987-21139072)
chr7 (324-389)||(23191882-23191947)
chr7 (326-383)||(38134416-38134473)
chr7 (317-366)||(38143232-38143281)
chr7 (329-389)||(1401011-1401071)
chr7 (307-395)||(1433434-1433522)
chr7 (306-366)||(5233638-5233698)
chr7 (305-389)||(5409825-5409909)
chr7 (306-378)||(7758319-7758391)
chr7 (330-378)||(11700800-11700848)
chr7 (307-375)||(33384573-33384641)
chr7 (331-394)||(7197312-7197375)
chr7 (340-395)||(11722122-11722177)
chr7 (312-395)||(18013070-18013153)
chr7 (332-375)||(30731037-30731080)
chr7 (312-366)||(3142074-3142128)
chr7 (312-366)||(7058435-7058489)
chr7 (312-366)||(7328687-7328741)
chr7 (326-372)||(17851434-17851480)
chr7 (313-383)||(23128658-23128728)
chr7 (333-367)||(30516374-30516408)
chr7 (316-390)||(46332919-46332993)
chr7 (317-390)||(5835232-5835305)
chr7 (316-365)||(9482944-9482993)
chr7 (326-367)||(19930951-19930992)
chr7 (317-366)||(24146825-24146874)
chr7 (312-389)||(24339628-24339705)
chr7 (330-366)||(2424623-2424659)
chr7 (326-366)||(8239060-8239100)
chr7 (311-367)||(12843170-12843226)
chr7 (315-375)||(19992001-19992061)
chr7 (326-394)||(21828415-21828483)
chr7 (327-375)||(27093424-27093472)
chr7 (327-375)||(27184829-27184877)
chr7 (318-366)||(36314629-36314677)
[»] chr6 (61 HSPs)
chr6 (316-384)||(9629374-9629442)
chr6 (327-389)||(7996389-7996451)
chr6 (327-389)||(8022350-8022412)
chr6 (306-395)||(9027158-9027247)
chr6 (316-398)||(20371110-20371192)
chr6 (272-389)||(5732471-5732583)
chr6 (316-389)||(7265593-7265666)
chr6 (306-375)||(9025484-9025553)
chr6 (326-386)||(19040341-19040401)
chr6 (326-374)||(30866154-30866202)
chr6 (316-375)||(7377979-7378038)
chr6 (315-366)||(9617443-9617494)
chr6 (328-395)||(9658859-9658926)
chr6 (312-387)||(32320665-32320740)
chr6 (312-395)||(34073343-34073426)
chr6 (312-394)||(677818-677900)
chr6 (313-395)||(3398599-3398680)
chr6 (305-395)||(7086775-7086865)
chr6 (313-395)||(10294087-10294169)
chr6 (312-389)||(7723246-7723323)
chr6 (317-364)||(13360373-13360420)
chr6 (305-395)||(20518325-20518416)
chr6 (326-384)||(13364715-13364773)
chr6 (328-366)||(26314646-26314684)
chr6 (318-363)||(97819-97864)
chr6 (328-377)||(5462684-5462733)
chr6 (305-366)||(10770663-10770724)
chr6 (326-395)||(13851716-13851785)
chr6 (312-389)||(16766683-16766760)
chr6 (317-366)||(33419182-33419231)
chr6 (275-375)||(2117076-2117175)
chr6 (314-366)||(7151421-7151473)
chr6 (329-389)||(7938102-7938162)
chr6 (305-365)||(9024165-9024225)
chr6 (312-388)||(26562676-26562752)
chr6 (316-384)||(33001289-33001357)
chr6 (326-388)||(10339135-10339198)
chr6 (312-355)||(11424707-11424750)
chr6 (310-389)||(19044450-19044529)
chr6 (316-375)||(21924935-21924994)
chr6 (312-366)||(13815451-13815505)
chr6 (312-366)||(15443704-15443758)
chr6 (310-395)||(34290073-34290156)
chr6 (333-366)||(6299521-6299554)
chr6 (333-366)||(6306331-6306364)
chr6 (329-366)||(8389485-8389522)
chr6 (313-366)||(9195751-9195804)
chr6 (326-363)||(11591880-11591917)
chr6 (317-386)||(32298608-32298677)
chr6 (329-366)||(32299284-32299321)
chr6 (330-395)||(32839660-32839725)
chr6 (317-366)||(33340946-33340995)
chr6 (317-366)||(35125103-35125152)
chr6 (326-374)||(1532241-1532289)
chr6 (331-395)||(16833288-16833352)
chr6 (331-402)||(17302529-17302601)
chr6 (307-375)||(19147842-19147910)
chr6 (326-366)||(21142127-21142167)
chr6 (326-366)||(24832597-24832637)
chr6 (331-395)||(25038086-25038150)
chr6 (330-366)||(31579239-31579275)
[»] scaffold0022 (2 HSPs)
scaffold0022 (311-389)||(99879-99957)
scaffold0022 (328-395)||(90823-90890)
[»] chr8 (39 HSPs)
chr8 (317-375)||(12606830-12606888)
chr8 (326-395)||(24362212-24362281)
chr8 (310-375)||(21465412-21465477)
chr8 (326-375)||(31236587-31236636)
chr8 (326-375)||(34897085-34897134)
chr8 (330-395)||(37283824-37283889)
chr8 (331-395)||(24669413-24669477)
chr8 (311-395)||(25172693-25172777)
chr8 (312-375)||(14634137-14634200)
chr8 (329-392)||(20679408-20679471)
chr8 (312-395)||(22651956-22652039)
chr8 (326-389)||(39954289-39954352)
chr8 (326-375)||(4611534-4611583)
chr8 (316-389)||(4786338-4786411)
chr8 (313-366)||(11803268-11803321)
chr8 (313-366)||(11927083-11927136)
chr8 (317-366)||(12559107-12559156)
chr8 (316-389)||(13844596-13844669)
chr8 (331-395)||(4673440-4673504)
chr8 (326-374)||(20785475-20785523)
chr8 (330-366)||(24017452-24017488)
chr8 (326-366)||(34201056-34201096)
chr8 (315-375)||(36934670-36934730)
chr8 (319-366)||(3508061-3508108)
chr8 (328-366)||(12985401-12985439)
chr8 (328-366)||(14134708-14134746)
chr8 (326-396)||(31109528-31109598)
chr8 (329-366)||(3025560-3025597)
chr8 (313-366)||(11944674-11944727)
chr8 (326-375)||(14731712-14731761)
chr8 (339-376)||(18069154-18069191)
chr8 (326-375)||(27213547-27213596)
chr8 (310-395)||(28384988-28385073)
chr8 (326-366)||(8798841-8798881)
chr8 (345-397)||(12124086-12124138)
chr8 (340-376)||(18067958-18067994)
chr8 (334-366)||(29447128-29447160)
chr8 (326-366)||(37225753-37225793)
chr8 (331-375)||(40332191-40332235)
[»] scaffold0168 (1 HSPs)
scaffold0168 (275-395)||(21023-21149)
[»] scaffold0123 (1 HSPs)
scaffold0123 (312-383)||(44521-44592)
[»] scaffold0110 (1 HSPs)
scaffold0110 (307-388)||(28837-28918)
[»] scaffold0044 (1 HSPs)
scaffold0044 (312-385)||(53170-53243)
[»] scaffold0020 (2 HSPs)
scaffold0020 (306-395)||(135302-135391)
scaffold0020 (310-366)||(137789-137845)
[»] scaffold0036 (1 HSPs)
scaffold0036 (313-388)||(9744-9819)
[»] scaffold0004 (1 HSPs)
scaffold0004 (331-389)||(92793-92851)
[»] scaffold0085 (1 HSPs)
scaffold0085 (326-395)||(26373-26442)
[»] scaffold0011 (1 HSPs)
scaffold0011 (317-366)||(240022-240071)
[»] scaffold1449 (1 HSPs)
scaffold1449 (312-355)||(1262-1305)
[»] scaffold0008 (1 HSPs)
scaffold0008 (312-395)||(263368-263451)
[»] scaffold0171 (1 HSPs)
scaffold0171 (305-395)||(23400-23490)
[»] scaffold0037 (1 HSPs)
scaffold0037 (332-366)||(102914-102948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (329-395)||(225281-225347)
[»] scaffold0376 (1 HSPs)
scaffold0376 (315-375)||(6312-6372)
[»] scaffold0320 (1 HSPs)
scaffold0320 (318-366)||(17038-17086)
[»] scaffold0306 (1 HSPs)
scaffold0306 (331-395)||(13380-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (331-395)||(21883-21947)
[»] scaffold0136 (1 HSPs)
scaffold0136 (331-395)||(3864-3928)


Alignment Details
Target: chr4 (Bit Score: 319; Significance: 1e-180; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 29 - 407
Target Start/End: Complemental strand, 7970869 - 7970489
Alignment:
Q  29 aatagcaaccattggtgccatcttcaatttcaggtaccatgttacttttttaatgtaaatatcatattttgtttttcatctaatatttgatattatagta 128  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7970869 aatagcaacgattggtgccatcttcaatttcaggtaccatgttacttttttaatgtaaatatcatattttgtttttcatctaatatttgatattatagta 7970770  T
Q  129 gaaaatgcgatggaaattagactaaggtggtttgaacatgtggacagaatacctcttgattctgttgtaacaaaagtag----attagatggagggtagt 224  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    |||||||||||||||||    
T  7970769 gaaaatactatggaaattagactaaggtggtttgaacatgtggacagaatacctctagattctgttgtaacaaaagtagattaattagatggagggtagt 7970670  T
Q  225 cacatcacccataggagaggaagacttggaaagatgtagagattaatgagctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaa 324  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7970669 cacatcacccataggagagtaagacttagaaagatgtagagattaatgagctatgaagcaaggacacttcttggattaggcgtgtctgacacgacaccaa 7970570  T
Q  325 aacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctctgct 407  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  7970569 aacatataattacactgaattatatgattttctc--attattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgct 7970489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 2234295 - 2234218
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctctgct 407  Q
    |||||||||||||||||| |||||||||||||||||   ||||| |||| ||||||| |||||||||| || ||||||    
T  2234295 ataattacattgaattatgtgattttctcaaattatcaacggtgacagcgtgtcagtatctgtgtccgtatatctgct 2234218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 3712519 - 3712568
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3712519 acatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 35723394 - 35723458
Alignment:
Q  326 acatataattacattgaattatatg-attttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||||| || ||||||||||    
T  35723394 acatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 15029824 - 15029743
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    ||||||||| ||||||||||||| |||||||| |||| || |||||||||| || ||||| || |||||||||| ||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc-gtgtccgg 15029743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 35952613 - 35952667
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||  | |||||||||||||||||||||||||||||| ||||||||||    
T  35952613 gacacgacactgatacatataattacattgaattatatgattttatcaaattatt 35952667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 36635395 - 36635310
Alignment:
Q  305 cgtgtctgacacg-acaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||  |||| || ||||||||||||| |||||||| |||||||||||||||||| | |||||  || ||||||||||    
T  36635395 cgtgtctgacactcacacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtc 36635310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 21945547 - 21945483
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||| | ||||| |||||||||| || ||||| |||||||||||||||||||    
T  21945547 taattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 14465090 - 14465157
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    ||||||||||||||||| ||||||| |||||||||| |  |||| ||  |||||||||||||||||||    
T  14465090 taattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtccgg 14465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 56258001 - 56257933
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||| |||||||||||  | ||| ||||||||| ||||||||||||||||||||||||||| || |||||    
T  56258001 cgtgtttgacacgacac--agacacataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 8423731 - 8423777
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 15659756 - 15659810
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| |||||||||||||  |||||||  |||||||||||||||||    
T  15659756 gacacgacaccaacacatataattacaccgaattatgagattttctcaaattatt 15659810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 21539879 - 21539941
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 390  Q
    ||||||||||| | |||||||||||||||| ||||||||   |||||| ||||||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtct 21539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 40613499 - 40613441
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 384  Q
    ||||||||||||| |||||||| ||||||||||||| |||| |||||||| || |||||    
T  40613499 acatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 18576033 - 18576086
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 365  Q
    |||| |||||||| |||||||||||||  ||||||| |||||||||||||||||    
T  18576033 gacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 22440610 - 22440659
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| |||||||| ||||||||||||||||||  |||||||    
T  22440610 acatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 37698759 - 37698698
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||| |||||||||| |||||||||||||||| | | |||||| ||| |||||||    
T  37698759 atataattacactgaattatataattttctcaaattattagagatgtcagtatgccagtgtc 37698698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 903971 - 903931
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattatt 903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 44081587 - 44081627
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  44081587 acatataattacattaaattatatgattttttcaaattatt 44081627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 44796972 - 44797020
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    |||| ||||||||||||||||| | ||||||||||||||||| ||||||    
T  44796972 acatgtaattacattgaattatgttattttctcaaattattgtcggtgt 44797020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 366
Target Start/End: Original strand, 7214533 - 7214572
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  7214533 catataattacattaaattatgtgattttctcaaattatt 7214572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 232
Target Start/End: Complemental strand, 7682102 - 7682071
Alignment:
Q  201 aaagtagattagatggagggtagtcacatcac 232  Q
    ||||||||||||||||||||||||||||||||    
T  7682102 aaagtagattagatggagggtagtcacatcac 7682071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 8402752 - 8402787
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaa 361  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8402752 acatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 19482731 - 19482648
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| || | ||||||||  ||||||| |||| || |||||||||| |  ||||| || ||||||||||||||||    
T  19482731 gacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 19482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 46715486 - 46715533
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||| ||||||||||||| ||||| ||||||||||||| |||||||    
T  46715486 atataactacattgaattatgtgattgtctcaaattattgtcggtgtc 46715533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 56488520 - 56488583
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||| |||||  |||||||||||||||||||||||| || ||||||||| | |||| |||||    
T  56488520 acatatgattaccctgaattatatgattttctcaaattgttagcggtgtcaacgtgtcggtgtc 56488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 5775354 - 5775408
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||| |||||| | ||||||||||||| | |||||| ||||||||||||||||||    
T  5775354 gacatgacaccgacacatataattacacttaattatgtgattttctcaaattatt 5775408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 6273990 - 6273936
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    |||||||||| | |||||||| ||||||||||||||||| | |||||||| ||||    
T  6273990 tataattacactaaattatatcattttctcaaattattgtctgtgtcagcgtgtc 6273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 9996898 - 9996848
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattg 367  Q
    |||||| | ||||||||||| | |||||||| |||||||||||||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattattg 9996848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 407
Target Start/End: Original strand, 12895105 - 12895206
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctct 404  Q
    |||||| ||||||||||| | || | ||||||| ||||||||| ||||||| |||||||||| || || || || |||| ||||| ||||||| |||| |    
T  12895105 cgtgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtccgtatctgt 12895203  T
Q  405 gct 407  Q
    |||    
T  12895204 gct 12895206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 33950194 - 33950140
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcgg 371  Q
    |||||| | |||||| |||||||| |||||| |||||||||||||||||| ||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 40742654 - 40742600
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||| | | ||||||||||||| |  ||||||||||||||||||||||||    
T  40742654 gacacgacatcgacacatataattacactagattatatgattttctcaaattatt 40742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 49659523 - 49659573
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||| ||| |||||| | |||||||| ||||||||||||||||    
T  49659523 cgacaccaaaacctatgattacactaaattatatcattttctcaaattatt 49659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 999358 - 999407
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| | ||||||||||||| ||||||||||| ||| ||||    
T  999358 acatataattacactaaattatatgatttactcaaattattagcgatgtc 999407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 13783330 - 13783261
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| |||||| | |||| ||||||||| ||| |||||||| |  |||||||||| |||||    
T  13783330 acatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 18513251 - 18513300
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||| ||||||||||||||| | ||||||||||||||||  |||||||    
T  18513251 acatatgattacattgaattatgtcattttctcaaattattatcggtgtc 18513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Original strand, 19230322 - 19230359
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  19230322 tataattacattgaattatgttattttctcaaattatt 19230359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 30982874 - 30982935
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtg 373  Q
    ||||||||||| | || |||||||||| |||| ||| |||||||||||||| ||| ||||||    
T  30982874 gacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 847995 - 847931
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||| | |||||||| | |||||||||||||||| ||||  || || ||||||||||||||||    
T  847995 taattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtc 847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 10013961 - 10013913
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  10013961 acaccaacacatataattacattaaattatattattttgtaaaattatt 10013913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 10021102 - 10021054
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  10021102 acaccaacacatataattacattaaattatattattttgtaaaattatt 10021054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 366
Target Start/End: Complemental strand, 12077869 - 12077837
Alignment:
Q  334 ttacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||| ||||||||||||||||||    
T  12077869 ttacattgaattatgtgattttctcaaattatt 12077837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 16189754 - 16189710
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    ||||||||| |||||||| ||||||||||||||| || |||||||    
T  16189754 ataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 366
Target Start/End: Original strand, 24613719 - 24613751
Alignment:
Q  334 ttacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||| ||||||||||||||||||    
T  24613719 ttacattgaattatgtgattttctcaaattatt 24613751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 30838275 - 30838219
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| | || |||||||||| | |||||||| ||||| ||||||||||    
T  30838275 ctgacacgacaccgatacttataattacactaaattatataattttatcaaattatt 30838219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 32915601 - 32915645
Alignment:
Q  312 gacacgaca-ccaaaacatataattacattgaattatatgatttt 355  Q
    ||||||||| || |||||||||||||||||||||||| |||||||    
T  32915601 gacacgacaaccgaaacatataattacattgaattatgtgatttt 32915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 40179647 - 40179715
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| |||||||| ||||||| ||||| ||||   ||||||| | |||||||||| |||||    
T  40179647 catataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 40224541 - 40224581
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| |||||||||| |||||| ||||||||||||||||    
T  40224541 acatattattacattgacttatatcattttctcaaattatt 40224581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 40774330 - 40774290
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||||||||||| ||||||| | ||||||||    
T  40774330 acatataattacattgaattatctgattttataaaattatt 40774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 6427415 - 6427336
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||  || ||||||||||    
T  6427415 ctgacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 6427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 395
Target Start/End: Original strand, 7918206 - 7918290
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||  | ||||||||||||| |||||||| |||||||||||||||||| | | ||||||| ||||| ||||||||||    
T  7918206 tgacacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtc 7918290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 395
Target Start/End: Complemental strand, 9709918 - 9709800
Alignment:
Q  271 tgagctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcg 370  Q
    |||||||||||||| |||| || || |||||| |||||||     ||||||| | |||||||||||||  ||||||| |||||||||||||||||| |||    
T  9709918 tgagctatgaagcatggacactcct-ggattaagcgtgtc-----cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcg 9709825  T
Q  371 gtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||  ||||||||||||| |||||    
T  9709824 gtgtaggcatgtcagtgtccgtgtc 9709800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 36878507 - 36878439
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||| || ||||||||||| ||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccg 36878439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 8842714 - 8842793
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||| | | |||| | || ||||||||||||||||    
T  8842714 cgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtgccggcgtgtcagtgtctgtgtc 8842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 395
Target Start/End: Original strand, 1486698 - 1486788
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||| ||||||||||| | || |||||||||| |||||||| ||||||| |||||||||| || |||||||| ||||||| || |||||    
T  1486698 cgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 38503383 - 38503320
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||| |||||| | ||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  38503383 gacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtc 38503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 20157340 - 20157409
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||| ||||||||||| | |||||| |||||| |||||||| ||||||||||| |||||| ||||||||    
T  20157340 gtgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 44482293 - 44482240
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 365  Q
    ||||||||||| | ||||||||||||| |||||||| |||||||||||||||||    
T  44482293 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 5898277 - 5898345
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| |||||||| ||||||| ||| |||||| |||||||| || | ||||||||||||||    
T  5898277 catataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtc 5898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 5927355 - 5927419
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||| |||||||||||||| |||||||||| || |||| ||| |||||||||| |||||    
T  5927355 taattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 377
Target Start/End: Complemental strand, 34371775 - 34371712
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 377  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||| ||||||| ||||||||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcag 34371712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 2896140 - 2896199
Alignment:
Q  335 tacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 394  Q
    |||| |||||||| |||||||||||||||||| |||||||| || |||||||||| ||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 9629896 - 9629959
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||| | || |||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  9629896 gacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtc 9629959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 17831541 - 17831604
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||| |||||| ||||| || |||||||||||||||||| |||||||| || ||||||||||    
T  17831541 acatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 397
Target Start/End: Original strand, 18556454 - 18556537
Alignment:
Q  314 cacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    ||||||||||| || | |||||||||| |||||| |||| || |||||||||| || ||||| || |||||||||| |||||||    
T  18556454 cacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 18556537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 40181930 - 40181871
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 16927186 - 16927264
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| | ||||||||||| |||||||||||||||| |||||||||| ||  || |  | ||||||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtc 16927264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 22781501 - 22781439
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagc 378  Q
    |||||||||  |||||||||| ||| |||||||||||||| | |||||||| |||||||||||    
T  22781501 cgacaccaatgcatataattatatttaattatatgattttataaaattattagcggtgtcagc 22781439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 27471567 - 27471645
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||| |||||||| |||||||| || ||||||||||||||| ||||| || |  ||||||||| ||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtc 27471645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 389
Target Start/End: Original strand, 28273103 - 28273161
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||| |||||||||||||||| |||||| ||| |  |||||||||||||||||||    
T  28273103 taattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtc 28273161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 46348398 - 46348464
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    |||||||| | |||||||||||||| |||||||||| || ||||| || |||||||||| |||||||    
T  46348398 taattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 46348464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 48148034 - 48148108
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatga-ttttctcaaattattggcggtgtcagcatgtcagt 386  Q
    |||||||||| | | ||||||||||| |||||||||||| |||| | |||||||| ||||||||| |||||||||    
T  48148034 acacgacaccgacatatataattacactgaattatatgatttttttaaaattattagcggtgtcaacatgtcagt 48148108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 9690305 - 9690354
Alignment:
Q  349 tgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    |||||||||||  ||||| ||||||||||| |||||||||||||||||||    
T  9690305 tgattttctcagtttattagcggtgtcagcgtgtcagtgtctgtgtccgg 9690354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 17425103 - 17425152
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||||||||||||||| ||||||| ||||||||||  |||||||    
T  17425103 acatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 25098565 - 25098614
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| |||||||| |||||||||||||||||  ||||||||    
T  25098565 acatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 25361949 - 25361896
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 365  Q
    ||||||||||  | ||||||||||||| |||||||| |||||||||||||||||    
T  25361949 gacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 30847730 - 30847787
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    |||||| ||||||||||||||| | ||||| |||||||||| || |||||||||||||    
T  30847730 acatatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtc 30847787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 1864890 - 1864930
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  1864890 acatataattacactgaattatgtgattttctcaaattatt 1864930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 36906062 - 36905998
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    ||||||| || |||| ||||||||||||  |||||||| ||||||||||| |||||| |||||||    
T  36906062 ctgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 5376496 - 5376579
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | || | |||||||| |||||||| | ||||||| |||||||| |||||||| || ||| |||||| |||||    
T  5376496 gacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtc 5376579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 9828107 - 9828044
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||| | ||||| ||||||| |||||||| ||||||| |||||||||| | ||||||    
T  9828107 gacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtc 9828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 10572586 - 10572661
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||| ||||| | |||| ||||||||  ||||||| |||||||||||||||||| | |||||| || |||||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 13436517 - 13436458
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||| ||||||||||||| |||||||| |||||| || |||||||| || |||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtc 13436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 14332642 - 14332709
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    ||||||| | ||||||||||||| | |||||| |||||||||||||||||| | |||||  |||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 15641042 - 15641109
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||| ||||| ||||| || ||||||||| |||||||| || ||||| ||||||||||||| |||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtc 15641109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 19324611 - 19324572
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattat 365  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  19324611 acatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 388
Target Start/End: Original strand, 19562622 - 19562693
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||||| | ||||||||||||| |||| |||  ||||||||||||||||| || ||||| || |||||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgt 19562693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 345
Target Start/End: Original strand, 31511970 - 31512009
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaatt 345  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  31511970 gtgtctgacaggacaccaacacatataattacattgaatt 31512009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 38078676 - 38078743
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    ||||||||||||||||| ||||||| |||||||||| || |||||  | |||||||||  ||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccgg 38078743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 41510895 - 41510962
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 394  Q
    ||||| |||||||| |||||||| ||||||| |||||| | | ||||||| |||||||||||| ||||    
T  41510895 catatgattacattcaattatatcattttcttaaattactagtggtgtcaacatgtcagtgtccgtgt 41510962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 52903308 - 52903229
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||| | ||||||||||||| |||||||||||||||| | ||||||||  |||| || || ||| |||||| |||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 2283726 - 2283676
Alignment:
Q  315 acgacaccaaaacatataattacattgaattatatgattttctcaaattat 365  Q
    |||||||||| || |||||||||||||||| || ||||||| |||||||||    
T  2283726 acgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 5944346 - 5944261
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatga--ttttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | || |||||||||| |||||||| |||  |||| |||||||||| || ||| | || ||||||||||||||||    
T  5944346 gacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtc 5944261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 23636050 - 23636128
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||| | ||||| ||||||| |||||||| | ||||||||||||| |||||||| || || ||||| |||| |||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtc 23636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 34298482 - 34298436
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||| |||||||| |||||||||||||||||| | ||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtc 34298436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 41500717 - 41500779
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||| |||||||| |||||||| ||||||| |||||| | | ||||||| ||||||||||||    
T  41500717 catatgattacattcaattatatcattttcttaaattactagtggtgtcaacatgtcagtgtc 41500779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 113362 - 113289
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcag 385  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||||    
T  113362 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 1262928 - 1262871
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||||| |||||||||| |||||||||||||||||| || ||||| || |||| ||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgt 1262871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 6415002 - 6415083
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    |||||| | |||| |||||| | || ||||| |||||||||||||| ||| ||| |||| || |||||||||| ||||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccgg 6415083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 12443470 - 12443519
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||| ||||||| |||||||| |||||||||||||||||| || |||||    
T  12443470 acatacaattacactgaattatgtgattttctcaaattattagctgtgtc 12443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 13997932 - 13997867
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctg 391  Q
    ||||||||||||| |||||||| ||||||| | |||| |||  ||||||| || ||||||||||||    
T  13997932 acatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtctg 13997867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 374
Target Start/End: Complemental strand, 19909364 - 19909298
Alignment:
Q  312 gacacgacaccaaaacatataattacat----tgaattatatgattttctcaaattattggcggtgt 374  Q
    |||||||||||||| ||||||||||| |    ||| |||| |||||||||||||||||| |||||||    
T  19909364 gacacgacaccaaagcatataattacctacactgagttatgtgattttctcaaattattagcggtgt 19909298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| |  |||||||| |||| |||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 25452162 - 25452227
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||| ||||||||  ||||||||||||||||| || ||||  ||||||| |||||| ||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgtctttgtc 25452227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 33940379 - 33940310
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||| || ||| ||| |||||||||||||||||||| ||| ||||||  ||||||||  |||||||    
T  33940379 gtgtctgataccacatcaacacatataattacattgaattgtatcattttcataaattattatcggtgtc 33940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 34712372 - 34712433
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| ||||||||||  | ||||||||||||| | |||||| | ||||||||||||||||    
T  34712372 cgtgtccgacacgacactgacacatataattacactaaattatgttattttctcaaattatt 34712433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Original strand, 40747786 - 40747823
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  40747786 tataattacattgaattatgtcattttctcaaattatt 40747823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 41017405 - 41017454
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| | ||||||||||||| |||||| | ||||||||||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatt 41017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 2288181 - 2288217
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  2288181 ataattacattgaattatgtgattttcttaaattatt 2288217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 10233302 - 10233262
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| |||||||| |||||||||||| |||||    
T  10233302 acatataattacactgaattatgtgattttctcaatttatt 10233262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 12707875 - 12707923
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| |||||||||| || | |||||||||||||||| ||||||||    
T  12707875 acaccaatacatataattgcactaaattatatgattttcttaaattatt 12707923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 12713329 - 12713377
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||||||||| | |||||| ||||||||| ||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattatt 12713377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 12717420 - 12717468
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||||||||| | |||||| ||||||||| ||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattatt 12717468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 16164325 - 16164365
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||| |||||| ||||||| ||||||||||    
T  16164325 acatataattacattaaattatgtgattttttcaaattatt 16164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 383
Target Start/End: Complemental strand, 23653386 - 23653346
Alignment:
Q  343 attatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    ||||| |||||||||||||||||| ||||||||| ||||||    
T  23653386 attatgtgattttctcaaattatttgcggtgtcatcatgtc 23653346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 23804477 - 23804437
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||| |||||||| ||||| ||||||||||    
T  23804477 acatataattacattaaattatataattttatcaaattatt 23804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 29163381 - 29163453
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    ||||||| | ||||||||||| |||||||||| ||||||||  ||||| || |||||||| || |||| ||||    
T  29163381 cgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtctgtgt 29163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 32461392 - 32461428
Alignment:
Q  274 gctatgaagcaaggacgcttcttggattaggcgtgtc 310  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  32461392 gctatgaagcacggacacttcttggattaggcgtgtc 32461428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 41877485 - 41877549
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| | |||||| | |||||||||||||||| |||||||| || |  |||||||||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtc 41877549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 3966568 - 3966489
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||| | ||||||||||||| |||||| | |||||||||||||||||| |||||||| |||||||||||||    
T  3966568 ctgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtc 3966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 39205950 - 39205858
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    |||||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||||| || |||||  | |||| |||||||| ||||    
T  39205950 cgtgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccg 39205858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 396
Target Start/End: Complemental strand, 27144512 - 27144442
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtcc 396  Q
    ||||||||||||| | |||||| |||||| ||||||||||| |||||||| || |||||||||||||||||    
T  27144512 acatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtcc 27144442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 32630745 - 32630803
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 384  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  32630745 acatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgtca 32630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 377
Target Start/End: Original strand, 6471886 - 6471950
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 377  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcag 6471950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 38749552 - 38749640
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtg 393  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| | ||||| ||||||||||  |||||||  |||||| |||| ||||    
T  38749552 cgtgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgtttgtg 38749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 6035545 - 6035463
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | | ||||||||||| |||||||||| |||| ||||||||||| |||||||| || ||||||||||| ||||    
T  6035545 gacacgacaccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgtctttgtc 6035463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 32766939 - 32767002
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||| || |||||||||||||||||||| |  ||||||||||||||||| ||||||||    
T  32766939 gacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtc 32767002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 11685999 - 11685925
Alignment:
Q  315 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||| | ||||||||||||| | ||||||  || |||||||||||||| |||||||| |||||||||||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 26312828 - 26312755
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| ||||| || |||| ||||||||    
T  26312828 cgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtc 26312755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 398
Target Start/End: Complemental strand, 31084393 - 31084301
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    |||||| ||||||||| | | || | ||||||||||||||||| ||||||| |||||||||| || ||||| || |||||||||| ||||||||    
T  31084393 cgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccgg 31084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 2436991 - 2436900
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    ||||| ||||||||||| | ||||||||| |||  ||||||| |||||||  ||||||||| |||||||| || |||||||||| ||||||||    
T  2436991 gtgtcggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc-gtgtccgg 2436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 388
Target Start/End: Complemental strand, 18592136 - 18592060
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||||||||||   |||||||||||||||||||||| | ||||||| ||| |||| |||||||| |||| |||||||    
T  18592136 gacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgt 18592060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 21191071 - 21191135
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||| ||||||| |||||||||| || ||||| ||||||||||||| |||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtc 21191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 23012418 - 23012458
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  23012418 acatataattacattaaattatatgattttctcaaattatt 23012458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 366
Target Start/End: Complemental strand, 10298669 - 10298578
Alignment:
Q  275 ctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| |||| || || |||||||||||||| || |||||||| | || | ||||||||||| ||||| ||| ||| ||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattatt 10298578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 16203795 - 16203874
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||| | ||||||||||||| | ||||||  ||||||||||||||||| || ||||| |||||| |||||| |||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 22423808 - 22423891
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | | ||||||||| |||||||||| |||||||||||||||||| |  |||||||  ||||||| || |||||    
T  22423808 gacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtc 22423891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 30098372 - 30098335
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattatt 30098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    |||||||||| | ||||||||||||| | |||||| | |||||||||||||||| |||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 12927701 - 12927637
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 392  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| |||| |  |||| ||||||||    
T  12927701 atataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtctgt 12927637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 28296388 - 28296328
Alignment:
Q  315 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||| |||||| | ||||||||||||| | ||||||||||||||||  |||||||    
T  28296388 acgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtc 28296328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 28588674 - 28588742
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 384  Q
    ||||||| | || |||||||||| |||||||| ||||||||||||||||||  ||||||| || |||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 41091252 - 41091316
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||| | | ||||||||||||| |||||||| |||||||||||||| ||| || |||||    
T  41091252 tgacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 41995515 - 41995451
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||||||| ||||||| || ||||||| |  ||||| || ||||||||||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtc 41995451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 43001870 - 43001778
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    |||||| |||||  |||||| || | |||||||| |||||||| | ||||| |||||||||| || |||||  |||||||||||| |||||||    
T  43001870 cgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccg 43001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 12264839 - 12264902
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||| ||||| || | |||||||||||| ||| |||||||  |||||||||||||    
T  12264839 acatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgtc 12264902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 15086529 - 15086482
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaatta 364  Q
    |||||| | |||||||||||||||  ||||||||||||||||||||||    
T  15086529 gacaccgacacatataattacattacattatatgattttctcaaatta 15086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 366
Target Start/End: Original strand, 15405070 - 15405105
Alignment:
Q  331 taattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||||||||||||| ||||||||||    
T  15405070 taattacattgaattatatgattttttcaaattatt 15405105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 19737492 - 19737555
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||| ||| ||||||||||| | ||||||||||||||||  |||| ||||| ||||||||||    
T  19737492 acatatgattgcattgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgtc 19737555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 34879399 - 34879352
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtg 373  Q
    |||||| |||||| |||||||||||||||||||||||| || ||||||    
T  34879399 acatattattacactgaattatatgattttctcaaatttttagcggtg 34879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 10022684 - 10022642
Alignment:
Q  323 aaaacatataattacattgaattatatgattttctcaaattat 365  Q
    |||| ||||||||||| |||||||||||||||| |||||||||    
T  10022684 aaaatatataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 17593716 - 17593778
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 372  Q
    |||||||  |||||| | ||||||||||| |||||||  |||||||||||||||||| |||||    
T  17593716 ctgacacaccaccaacatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 17925172 - 17925222
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| | |||||| ||||||||||||||| ||||||||| ||||||||    
T  17925172 cgacaccgacacatattattacattgaattatgtgattttcttaaattatt 17925222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 24273040 - 24273078
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaatta 364  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  24273040 acatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 24389174 - 24389136
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaatta 364  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  24389174 acatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 26716178 - 26716124
Alignment:
Q  341 gaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||| |||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtc 26716124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 26985918 - 26985864
Alignment:
Q  341 gaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||| |||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtc 26985864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 9449510 - 9449449
Alignment:
Q  334 ttacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||||| ||||||||||||||||||   |||||| || || ||||||| |||||    
T  9449510 ttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtc 9449449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 25863250 - 25863213
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  25863250 tataattacactgaattatatcattttctcaaattatt 25863213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 41558644 - 41558701
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaatt 363  Q
    ||||| ||||||||||  | |||| ||||||||||||||||| | |||||||||||||    
T  41558644 gtgtccgacacgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 42029811 - 42029770
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttct 357  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  42029811 cgacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 42488063 - 42488132
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||| ||||||||||||||||||| ||||| | |||||||   |||||||  | ||||||||||||||||    
T  42488063 acatgtaattacattgaattatataattttattaaattatcaacggtgtcgacgtgtcagtgtctgtgtc 42488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 395
Target Start/End: Original strand, 5873548 - 5873592
Alignment:
Q  351 attttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||||||| | |||||| ||||||||||||| |||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtgtc 5873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 6326312 - 6326376
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||| | |||||||||||||| | ||| |||| || |||||||||| |||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtc 6326376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 394
Target Start/End: Complemental strand, 19579766 - 19579682
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 394  Q
    ||||||||||||| | || | ||||| || | |||||| |||||||||||||||||| || ||||| || | |||||||| ||||    
T  19579766 ctgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 395
Target Start/End: Original strand, 19820425 - 19820473
Alignment:
Q  347 tatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||||||||||| |||||||| |  |||||||||| |||||    
T  19820425 tatgattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtc 19820473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 27932279 - 27932235
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||| |||||||| | |||||||||||||||| ||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtc 27932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 395
Target Start/End: Original strand, 32428945 - 32429005
Alignment:
Q  335 tacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| | | ||||||||||||||  | |||||| |||||||||||| |||||    
T  32428945 tacattgaattatgtcactttctcaaattattatcagtgtcaccatgtcagtgtccgtgtc 32429005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 33035811 - 33035851
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| |||||||||||||||  ||||||||||    
T  33035811 acatataattacactgaattatatgatttattcaaattatt 33035851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 35017102 - 35017046
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||| |   |||||||||||| | |||||| ||||||||||||||||||    
T  35017102 ctgacacgacactatcccatataattacactaaattatgtgattttctcaaattatt 35017046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 395
Target Start/End: Complemental strand, 21616864 - 21616742
Alignment:
Q  275 ctatgaagcaaggacgcttcttggattaggcgtgtctgacac--gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 372  Q
    |||||||||| |||| ||||||||||||| |||||| | |||  |||||  | ||||||||||||| |||||||| |||||||||||||||||| |||||    
T  21616864 ctatgaagcacggacacttcttggattagccgtgtccggcaccggacacgtacacatataattacactgaattatgtgattttctcaaattattagcggt 21616765  T
Q  373 gtcagcatgtcagtgtctgtgtc 395  Q
    ||| || |||| ||||| |||||    
T  21616764 gtcggcgtgtccgtgtccgtgtc 21616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 37411254 - 37411323
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||| ||| |||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  37411254 acatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 377
Target Start/End: Complemental strand, 44860382 - 44860318
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 377  Q
    |||||||||| | ||||||||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcag 44860318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 18276579 - 18276504
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 392  Q
    |||||| | ||| ||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgt 18276504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 395
Target Start/End: Original strand, 20539632 - 20539753
Alignment:
Q  275 ctatgaagcaaggacgcttcttggattaggcgtgtct-gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtg 373  Q
    |||||||||| |||| || || |||| |||||||||| | ||||||||| | || | |||||||| | |||||||||||||| |||||||||| || |||    
T  20539632 ctatgaagcacggacactcctcggatcaggcgtgtctcgccacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtg 20539731  T
Q  374 tcagcatgtcagtgtctgtgtc 395  Q
    ||  | |||||||||| |||||    
T  20539732 tcgacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 21782832 - 21782897
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||| |||||||| |||||||||||||||||| || ||||| || ||||||||| ||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtc 21782897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 23718075 - 23718006
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||| |  |||||||||| |||||    
T  23718075 acatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 24105747 - 24105678
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||| |  |||||||||| |||||    
T  24105747 acatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 34691805 - 34691861
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 372  Q
    ||||||| | ||||||||||||| |||||||||||||||| |||||||||| |||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 34714217 - 34714273
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 372  Q
    ||||||| | ||||||||||||| |||||||||||||||| |||||||||| |||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 24975321 - 24975384
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||| |  |||||| ||||| ||||||||| ||||||||||||||||| ||||||||    
T  24975321 gacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtc 24975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 28677959 - 28677909
Alignment:
Q  325 aacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  28677959 aacatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 30527591 - 30527645
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||| | ||||||||||||| | |||||||||||||||||||||||||    
T  30527591 gacacgataccgacacatataattacactaaattatatgattttctcaaattatt 30527645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 37559021 - 37558955
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    ||||||||||||||||| |||||||  ||||||||| || ||||| || |||||||||| |||||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 37558955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 16069268 - 16069333
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||| |||||||||||||||| | ||||||||  ||||||| || |||||||||| |||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 12940950 - 12941014
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||||||||||| |||||||||| |  |||||| | |||||||||| |||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtc 12941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 20473366 - 20473302
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||||||| ||| | |||||||| |  ||||| |||||||||||||||||||    
T  20473366 taattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtc 20473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 27084302 - 27084262
Alignment:
Q  335 tacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  27084302 tacattgaattatatgattttctcaaattattagcagtgtc 27084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 35056931 - 35056883
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaa 360  Q
    ||||||||||| | ||||||||||||| ||||||||||| |||||||||    
T  35056931 gacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 4332971 - 4332908
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtg 393  Q
    |||||||||||||||||| |||||||| |||||||||  | ||||| |||||| ||| ||||||    
T  4332971 ataattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtg 4332908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 366
Target Start/End: Complemental strand, 18622670 - 18622615
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||| || |||||||||| |||||||| ||||||| | ||||||||    
T  18622670 tgacacgacaccaacacgtataattacactgaattatgtgattttattaaattatt 18622615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 31808126 - 31808063
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||| |||||||| ||||||| | |||||||| |||||||| |  ||||||||||    
T  31808126 acatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 896260 - 896198
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||||| ||||||||||| ||| ||||||||||||| |||| || ||||| || |||||||||    
T  896260 acatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 5367251 - 5367201
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| | ||||||||||||| |||||||| |||||| |||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattatt 5367201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 18420430 - 18420484
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||| ||||| | || ||||||| ||||||||||| ||||||||||||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattatt 18420484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Original strand, 22084848 - 22084882
Alignment:
Q  332 aattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| |||||||||||||||||||||||||||    
T  22084848 aattacactgaattatatgattttctcaaattatt 22084882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 22557010 - 22556964
Alignment:
Q  326 acatataattacattgaattatatgatt-ttctcaaattattggcgg 371  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||    
T  22557010 acatataattacattgaattatatgattattttcaaattattagcgg 22556964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 23354669 - 23354731
Alignment:
Q  333 attacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||| | |||||||| ||||||||||||||||  | ||||||||||||| ||||| |||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtc 23354731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 1328023 - 1327978
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||| | |||||| |||||||||||||||||||| ||||||||    
T  1328023 ataattatactgaattttatgattttctcaaattattagcggtgtc 1327978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 23355021 - 23355074
Alignment:
Q  342 aattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| ||||||||||||||||  | ||||||||||||| ||||| |||||    
T  23355021 aattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtc 23355074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 29970545 - 29970622
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||| | | |||||| |||||| |||| |||  ||||||||||||||||| |||||||||   ||||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 33861935 - 33861992
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattg 367  Q
    ||||||||| ||||| |||||| ||| |||| ||||||||  ||||||||||||||||    
T  33861935 ctgacacgataccaacacatatgattgcattaaattatatagttttctcaaattattg 33861992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 35449562 - 35449493
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| |||||| | ||||||||||||||||||  | ||||  || ||||||||| ||||||    
T  35449562 acatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtc 35449493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 2415374 - 2415326
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||| ||||| | |||||||| ||||||||||||||||    
T  2415374 acaccaacacatatagttacacttaattatataattttctcaaattatt 2415326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 17070936 - 17070980
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgatttt 355  Q
    |||||||||||||| | |||||||||||| ||||||||| |||||    
T  17070936 tgacacgacaccaatatatataattacatcgaattatataatttt 17070980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 18571021 - 18570981
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  18571021 acatatgattacattgaattatgtcattttctcaaattatt 18570981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 19613623 - 19613663
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  19613623 acatatcattacattgaattatgttattttctcaaattatt 19613663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 28121551 - 28121599
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||    
T  28121551 acaccaacacatataattacattgatttatgccattttctcaaattatt 28121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 30471087 - 30471047
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||| ||||||| ||||||||||||| ||||    
T  30471087 acatataattacatcgaattatgtgattttctcaaaatatt 30471047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 39279724 - 39279684
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| |||||||| ||||||||||| ||||||    
T  39279724 acatataattacactgaattatttgattttctcatattatt 39279684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 44605149 - 44605189
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||| ||||||||||||||||| | ||||||||||||||||    
T  44605149 acatgtaattacattgaattatgttattttctcaaattatt 44605189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 277 - 395
Target Start/End: Original strand, 25948848 - 25948966
Alignment:
Q  277 atgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtca 376  Q
    |||||||| ||||  | |||||||||  |||||| ||||||||||||| || |||||||||| |||||||| ||||||| |||||||||| || || ||     
T  25948848 atgaagcacggacattccttggattacacgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcg 25948947  T
Q  377 gcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| |||||    
T  25948948 gcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 8383316 - 8383237
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||| | || |||||||||| ||||||||||||||||||||||||||| |||||||| || ||||| |||| |||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 374
Target Start/End: Original strand, 8039831 - 8039893
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    ||||||||||| | ||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  8039831 gacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 395
Target Start/End: Original strand, 5441022 - 5441110
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| ||||| | |||||  ||| ||||||||||| ||||||||||||||| || |||||| | || ||||||||||||||||    
T  5441022 cgtgtctgacacaacaccgacacata--attccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtc 5441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 395
Target Start/End: Original strand, 34307793 - 34307859
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||| |||| ||| |||||||||||||||||| ||||||||||| |||  |||||||||||    
T  34307793 tataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtc 34307859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 9624689 - 9624640
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtca 376  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 15812832 - 15812893
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||| ||||||||| ||||||    
T  15812832 catataattacactgagttatgtgattttctcaaattatttgcggcgtcagcatgccagtgt 15812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 29112292 - 29112353
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||| ||||||||||||||||||||||| ||| | ||||||| | ||||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtc 29112353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 16789077 - 16789021
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||| || |||||||||| |||||||||||||||| | ||||||||    
T  16789077 ctgacacgacaccaacacttataattacactgaattatatgatttttttaaattatt 16789021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 7928509 - 7928450
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||| | ||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtc 7928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 11313796 - 11313859
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||| || ||||||||||||| | |||||| |||||||||||||||||| || |||||    
T  11313796 gacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtc 11313859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 16192746 - 16192809
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||  |||||||    
T  16192746 gacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 395
Target Start/End: Complemental strand, 10455852 - 10455770
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| ||||||||||||| | | |||||||||||||||| |||||| || ||||  || ||||| || |||||||    
T  10455852 acacgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtc 10455770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 21419455 - 21419505
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||| | |||||||||||||||||||||| ||||||| ||||||||    
T  21419455 cgacaccaacatatataattacattgaattatattattttcttaaattatt 21419505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 366
Target Start/End: Original strand, 23184076 - 23184122
Alignment:
Q  320 accaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  23184076 accaacacatataattacatagaattatatgattttgtcaaattatt 23184122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 32804550 - 32804608
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 384  Q
    ||||||||||||| | |||||| ||||||||||||||||||  ||||||| ||||||||    
T  32804550 acatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 40150572 - 40150621
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  40150572 gacaccgacacatatgattacattgaattatatcattttctcaaattatt 40150621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 29508493 - 29508453
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  29508493 acatataattacactgaattatatgattttttcaaattatt 29508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 4469897 - 4469830
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||||| |  || ||||| ||||||||||    
T  4469897 atatacttacactgaattatgtgattttcttaaattattggcggtattggcgtgtcaatgtctgtgtc 4469830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 14829752 - 14829670
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | || | |||||||  |||||||| ||||||| |||||||||| || ||||| || ||||||||||||||||    
T  14829752 gacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaatta 364  Q
    |||||||||||| ||||||||||||| | |||||| ||||||| ||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 49505164 - 49505227
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||| | |||||| |||||||||||||||||| ||||| || || |||| |||||    
T  49505164 acatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtc 49505227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 49651782 - 49651853
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| |||||||    
T  49651782 gacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 5407260 - 5407306
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||| |||||||| ||||||||||||||| || ||||||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtc 5407306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 23870572 - 23870618
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  23870572 tataatcacactgaattatatgattttttcaaattattagcggtgtc 23870618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 47775791 - 47775745
Alignment:
Q  309 tctgacacgacaccaaaacatataattacattgaattatatgatttt 355  Q
    |||||||| ||||||| |||| ||||||||||||||||||| |||||    
T  47775791 tctgacacaacaccaacacatgtaattacattgaattatatcatttt 47775745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 48353731 - 48353781
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| | ||||||||||||| | |||||| ||||||||||||||||||    
T  48353731 cgacaccgatacatataattacaattaattatttgattttctcaaattatt 48353781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 8789550 - 8789599
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattat 365  Q
    ||||||| | |||||||||||||  ||||||| |||||||||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 12704056 - 12704007
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| |||||||| || ||||||||||||||| | ||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtc 12704007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 13414528 - 13414487
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttct 357  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  13414528 cgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Original strand, 17005632 - 17005669
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  17005632 tataattacactgaattatatgattttatcaaattatt 17005669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 21720807 - 21720742
Alignment:
Q  332 aattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    ||||||| ||||||||  ||| |||||||||||||  ||||||| || |||||||||| |||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtccg 21720742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 27764749 - 27764716
Alignment:
Q  332 aattacattgaattatatgattttctcaaattat 365  Q
    |||||||||||||||||| |||||||||||||||    
T  27764749 aattacattgaattatataattttctcaaattat 27764716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 398
Target Start/End: Complemental strand, 33359779 - 33359738
Alignment:
Q  357 tcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  33359779 tcaaattattagctgtgtcagcgtgtcagtgtctgtgtccgg 33359738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 35222997 - 35222956
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttct 357  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  35222997 cgacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 3587335 - 3587383
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  3587335 acaccaacacatataattacattaaattatattattttgtaaaattatt 3587383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 6525713 - 6525761
Alignment:
Q  349 tgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    |||||||||||||||||| ||||||||  |||||||||||  |||||||    
T  6525713 tgattttctcaaattattagcggtgtcgacatgtcagtgtacgtgtccg 6525761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 388
Target Start/End: Complemental strand, 9800103 - 9800027
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    ||||||||||| | || || |||||||  ||||||| | |||||||||||||||| | |||||| || |||||||||    
T  9800103 gacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgt 9800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 366
Target Start/End: Complemental strand, 11252023 - 11251987
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattatt 11251987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 11493372 - 11493420
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||||| |||||||| ||||||||||| |||||| | ||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtc 11493420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 12704088 - 12704056
Alignment:
Q  332 aattacattgaattatatgattttctcaaatta 364  Q
    |||||||||||||||| ||||||||||||||||    
T  12704088 aattacattgaattatgtgattttctcaaatta 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 15796309 - 15796373
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||||||||||| ||||||||||  | ||||| || ||||| |||| |||||    
T  15796309 taattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtc 15796373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 48202279 - 48202319
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||| |||||| ||||||||||||| ||||    
T  48202279 acatataattacattaaattatgtgattttctcaaactatt 48202319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 3520352 - 3520421
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||| ||||||||||    
T  3520352 acatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtctgtgtc 3520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 22602706 - 22602789
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | ||||||||||||| |||||||| |||||||||||||| |||  ||||||| || |||||||| |||||||    
T  22602706 gacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtc 22602789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 32308183 - 32308106
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||  | ||||| ||||||| |||||||| |||||||||||||||||| |||||||| || ||||||||||    
T  32308183 gacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 397
Target Start/End: Complemental strand, 25791714 - 25791631
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    |||||||||| | |||||||| |||||||| |||| ||| |||||||||| ||| |||||||| || ||||||||||||||||||    
T  25791714 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattagcggtgtcggcgtgtcagtgtctgtgtccg 25791631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 5236049 - 5235966
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | | ||||||||||| | |||||||| ||||||| |||||||| ||||||||  | ||||||||||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtc 5235966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 15902885 - 15902802
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||| ||||| | ||||||||||||| | |||||| ||||||| ||||||||||   |||||| |||||||||||||||||||    
T  15902885 gacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtc 15902802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 20549850 - 20549771
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||| |  ||||||||| ||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 42720900 - 42720963
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||||| |||||| ||||||| |||||||||| ||||||||| | ||||||||||    
T  42720900 acatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 5548745 - 5548671
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcat 380  Q
    ||||| ||||||||||  | ||||||||||||| |||||||| |||||||||||||||||  |||||||| ||||    
T  5548745 gtgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 35297669 - 35297722
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||| ||||||||||| | |||||||| ||||||||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatt 35297722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 17307956 - 17307904
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaatta 364  Q
    ||||||||||||| ||||||||||||| |||||||| | ||||||||||||||    
T  17307956 gacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 22868091 - 22868023
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 394  Q
    ||||||||||||| |||||||| ||||||||||| |||||| | |||||| || |||||||||| ||||    
T  22868091 acatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgt 22868023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 395
Target Start/End: Complemental strand, 27945105 - 27945021
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| | || | |||||||| |||||||| | |||||||||||||||| | |||||| || |||||||||| |||||    
T  27945105 tgacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 16341576 - 16341505
Alignment:
Q  295 ttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| | ||||| |||||||||||   ||||||||||||| | |||||| ||||||||||||||||||    
T  16341576 ttggattatgtgtgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatt 16341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 26329378 - 26329461
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| || | ||||||||||||| |||||| | || |||||||||||||||  || |||| || ||||||||||||||||    
T  26329378 gacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtc 26329461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 19206108 - 19206050
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||| | ||||||||||| | |||||||| |||||||||||||||||| ||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 395
Target Start/End: Complemental strand, 22484083 - 22484005
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||| | ||||||||||| | ||||||||   ||||||| |||||||| |||||||| || ||||||||||||||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 375
Target Start/End: Original strand, 29787378 - 29787428
Alignment:
Q  325 aacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||| ||||||||| |||||||| |||||||||||||||||| ||||||||    
T  29787378 aacacataattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 6630909 - 6630986
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 390  Q
    |||||||| | | ||||||||||||| |||||||  ||| |||||||||||||| | |||||| || |||||||||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtct 6630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 7438750 - 7438693
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    ||||||||||||||||| ||||||| ||||||||||  | ||||| ||||||||||||    
T  7438750 taattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 8160479 - 8160414
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 377  Q
    ||||||| ||||| ||||||||||||| | |||||| | ||||||| |||||||| ||||||||||    
T  8160479 gacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtcag 8160414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 11890908 - 11890969
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| ||||||||||| | ||  ||||||||| |||||||||||||||| ||||||||||    
T  11890908 cgtgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattatt 11890969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 395
Target Start/End: Original strand, 21138987 - 21139072
Alignment:
Q  307 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||| ||||||||||| | ||||||||||||| | ||||||  |||||||||||||||||  ||||||   ||||||||||||||||||    
T  21138987 tgtccgacacgacaccgacacatataattacagt-aattat--gattttctcaaattattaacggtgttgacatgtcagtgtctgtgtc 21139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 389
Target Start/End: Complemental strand, 23191947 - 23191882
Alignment:
Q  324 aaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||| |||||||| |||| ||| |||||||||||||||||| |||||||| || | ||||||||    
T  23191947 aaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 38134416 - 38134473
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    |||||| ||||||||||||||| | ||||||||||||||||  |||||||| ||||||    
T  38134416 acatatgattacattgaattatgtcattttctcaaattattatcggtgtcaacatgtc 38134473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 38143281 - 38143232
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| ||||||||||||||| |||||| ||||||| ||||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgattttttcaaattatt 38143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 1401071 - 1401011
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||||| |||||||| ||| |||||||||||||| ||| | ||||| ||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtc 1401011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 1433522 - 1433434
Alignment:
Q  307 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||| ||||||||||| | |||||||||||||   ||| || ||||||||||||||||||  ||||||| || ||||| |||| |||||    
T  1433522 tgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtc 1433434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 366
Target Start/End: Complemental strand, 5233698 - 5233638
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||| ||||| ||||||| ||||||||||||| |  ||||| ||||||||||||||||||    
T  5233698 gtgtcggacacaacaccaacacatataattacactagattatgtgattttctcaaattatt 5233638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 5409825 - 5409909
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||| ||||||||||| | || | ||||| || |||||||| ||||||| |||||||||| || || ||||| ||||||||||    
T  5409825 cgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtc 5409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 7758391 - 7758319
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagc 378  Q
    ||||| ||||||||||| | ||| ||||||| | |||||||||| ||||||| |||||||| | |||||||||    
T  7758391 gtgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgtcagc 7758319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 11700848 - 11700800
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagc 378  Q
    |||||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  11700848 ataattacattgaattatgtgattttgtcaaattattaacggtgtcagc 11700800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 33384573 - 33384641
Alignment:
Q  307 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||| ||||| ||||||| ||||||||||||| | ||||||| |||||||||| ||||||  |||||||    
T  33384573 tgtccgacaccacaccaacacatataattacactaaattataggattttctcagattattaacggtgtc 33384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 394
Target Start/End: Original strand, 7197312 - 7197375
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 394  Q
    |||||||||||||||| |||||||| | |||||||| || ||||| || ||||| |||||||||    
T  7197312 taattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 11722122 - 11722177
Alignment:
Q  340 tgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| ||||||||||||||| || |||||||| || |||||||||| |||||    
T  11722122 tgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtc 11722177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 18013070 - 18013153
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||  | ||||||||||||| |||||||| | ||||| | |||||||| |  ||||||| ||||||||||| |||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtc 18013153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 375
Target Start/End: Complemental strand, 30731080 - 30731037
Alignment:
Q  332 aattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtc 30731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 3142074 - 3142128
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||| ||||| | |||||| |||||||||||||||||||||| ||||| |||||    
T  3142074 gacacaacaccgacacatatgattacattgaattatatgatttactcaatttatt 3142128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 7058489 - 7058435
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| || | |||||||| ||||||| |||||||| ||||||||||    
T  7058489 gacacgacaccaacacttgtaattacactgaattacatgattttttcaaattatt 7058435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 7328687 - 7328741
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||| | ||||||||||||| | |||||| | ||||||||||||||||    
T  7328687 gacacgacaccgacacatataattacactaaattatgttattttctcaaattatt 7328741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 17851480 - 17851434
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggt 372  Q
    ||||||||||||| |||||||| ||||||||| |||||||| |||||    
T  17851480 acatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 23128658 - 23128728
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    |||| ||||| | |||||| |||||| ||||||||||| |||||||||||||||   ||||||||| ||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgtcagcgtgtc 23128728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 30516374 - 30516408
Alignment:
Q  333 attacattgaattatatgattttctcaaattattg 367  Q
    ||||||||||||||||| |||||||||||||||||    
T  30516374 attacattgaattatatcattttctcaaattattg 30516408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 46332993 - 46332919
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 390  Q
    |||||||||||||| |||||||||| |||| | | ||||||||||| ||||  |  ||||| |||||||||||||    
T  46332993 cgacaccaaaacatttaattacattcaattgtgtcattttctcaaactattaccactgtcaacatgtcagtgtct 46332919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 5835305 - 5835232
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 390  Q
    |||||| | ||||||||||||| |||||||| | ||||||||||| |||| | |||||| || | |||||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtct 5835232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattat 365  Q
    ||||||| | ||||||||||||| |||||| | |||||||||||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 19930951 - 19930992
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattg 367  Q
    |||||||||||||||||||||| | ||||| |||||||||||    
T  19930951 acatataattacattgaattatgtcattttatcaaattattg 19930992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 24146874 - 24146825
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| | ||||||||||| |||||||||| ||||||||| ||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattatt 24146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 24339705 - 24339628
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||| ||||    
T  24339705 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtc 24339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 366
Target Start/End: Complemental strand, 2424659 - 2424623
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatt 2424623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 8239060 - 8239100
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| ||||||||| |||||||| ||||||||    
T  8239060 acatataattacactgaattataagattttcttaaattatt 8239100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 12843170 - 12843226
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattg 367  Q
    |||||||||||  | |||| ||||||||||||||||| | ||||| |||||||||||    
T  12843170 tgacacgacactgacacatgtaattacattgaattatgtaattttatcaaattattg 12843226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 19992061 - 19992001
Alignment:
Q  315 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||| | || |||||||||| |||| ||| |||||||||||||||||| || |||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 21828415 - 21828483
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 394  Q
    ||||| ||||||| || ||||| |||||||||||||||| |  ||||||| || |||||||||| ||||    
T  21828415 acatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 27093424 - 27093472
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||||| | |||||| ||||||||| |||||||| ||||||||    
T  27093424 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 375
Target Start/End: Complemental strand, 27184877 - 27184829
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||||| | |||||| ||||||||| |||||||| ||||||||    
T  27184877 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 36314629 - 36314677
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| |||||| ||||||||||| ||| | ||||||||||||||||    
T  36314629 acaccaacacatatgattacattgaaatatgtcattttctcaaattatt 36314677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 9629442 - 9629374
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 384  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 7996389 - 7996451
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  7996389 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 7996451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 8022412 - 8022350
Alignment:
Q  327 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  8022412 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 8022350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 9027247 - 9027158
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||| ||||||||||| | |||||||||||||  ||||||| ||||| |||||||||||| |||||||| || |||||||||| |||||    
T  9027247 gtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 20371110 - 20371192
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 398  Q
    ||||||| | ||||||||| ||||||| |||| |||||||||||||||||| |||||||| || ||||| |||| ||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtccgg 20371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 5732471 - 5732583
Alignment:
Q  272 gagctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcgg 371  Q
    ||||||||||||| |||| || || ||||||||||||||     ||||||| | ||||||||||||| | || ||| ||||||||||||||||||  |||    
T  5732471 gagctatgaagcatggacactcctcggattaggcgtgtc-----cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacgg 5732565  T
Q  372 tgtcagcatgtcagtgtc 389  Q
    |||| || ||||||||||    
T  5732566 tgtcggcgtgtcagtgtc 5732583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 7265593 - 7265666
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||| | ||||||||||||| |||||||| |||||||||||||||||| |||||||  || ||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 9025484 - 9025553
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||| ||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||    
T  9025484 gtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 19040401 - 19040341
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagt 386  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||| || |||||||    
T  19040401 acatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 30866154 - 30866202
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  30866154 acatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 7378038 - 7377979
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||| || ||||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 9617494 - 9617443
Alignment:
Q  315 acgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 9658926 - 9658859
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| |||||||| ||||||||| |||||||| |||||||| || |||||||||| |||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 387
Target Start/End: Original strand, 32320665 - 32320740
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtg 387  Q
    ||||||||||| | ||||||||| |||||||||||| ||||||| ||||||||||  |||||||||| | ||||||    
T  32320665 gacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 32320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 34073343 - 34073426
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| |  |||||||||||| ||||||||  ||||||||||||||||| ||| |||  ||||||||||||| |||||    
T  34073343 gacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtc 34073426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 394
Target Start/End: Complemental strand, 677900 - 677818
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 394  Q
    |||||||||||||  ||||||| |||| |  ||||||||||||||||||||||||  | ||||| || |||||||||||||||    
T  677900 gacacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 395
Target Start/End: Complemental strand, 3398680 - 3398599
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||| | || |||||||||| |||||||||||||||| |||||||||| || ||||| || |||||||||| |||||    
T  3398680 acacgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 7086865 - 7086775
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| ||||| | ||||||||||||| | |||||| |||||||||||||||||| || ||| |  | |||| |||||||||||    
T  7086865 cgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtc 7086775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 395
Target Start/End: Complemental strand, 10294169 - 10294087
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||| | |||||||||||||||||| |||  |||| |||||||||||| ||||| || |||||||||| || |||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtc 10294087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 7723246 - 7723323
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||| | |||||||||||   ||||||||||||||||||||||||||| || |||||  | ||||||||||    
T  7723246 gacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 13360373 - 13360420
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaatta 364  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 20518416 - 20518325
Alignment:
Q  305 cgtgtctgacac-gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| |||||||| ||||||||||| | ||| |||| | ||||||||||||| || | ||||| ||  ||||||||||||||||    
T  20518416 cgtgtctgacaccgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgttagtgtgtcagtgtctgtgtc 20518325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 13364715 - 13364773
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 384  Q
    |||||| |||||| ||||||||||||||||||||||||||  || ||||| ||||||||    
T  13364715 acatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 26314646 - 26314684
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  26314646 atataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 97819 - 97864
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaatt 363  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  97819 acaccaaaatatataattacatttaatcatatgattttctcaaatt 97864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 5462733 - 5462684
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcag 377  Q
    ||||||||||| |||||||| ||||||||||||||||||  |||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtcag 5462684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 10770663 - 10770724
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||||||| | || | |||||||| |||||||| ||||||| ||||||||||    
T  10770663 cgtgtctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 10770724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 13851785 - 13851716
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| |||||||  | |||||||||||||||| ||||||||  | |||||||||| |||||    
T  13851785 acatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 13851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 16766760 - 16766683
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||||||||    
T  16766760 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 33419231 - 33419182
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| |||||||||||||||||||||||| | ||| ||||||||||    
T  33419231 gacaccaacacatataattacattgaattatatcaatttttcaaattatt 33419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 2117175 - 2117076
Alignment:
Q  275 ctatgaagcaaggacgcttcttggattaggcgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    |||||||||| |||| || ||  |||||||| |||| |||||||||| | | | ||||||| ||||||||||| ||||||| |||||||||| | |||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacacgacacgaca-cttataattgcattgaattatgtgattttttcaaattattagaggtgt 2117077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 7151473 - 7151421
Alignment:
Q  314 cacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||| ||||||||||||| | |||||| ||||||| ||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatt 7151421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 7938162 - 7938102
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||||| | |||||||||||||| |||||||||| || ||||| || ||||||||||    
T  7938162 tataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 365
Target Start/End: Original strand, 9024165 - 9024225
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 365  Q
    |||||| ||||||||||  | |||||| ||||||||||||||| | |||||||||||||||    
T  9024165 cgtgtccgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 388
Target Start/End: Complemental strand, 26562752 - 26562676
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    ||||||||| | | ||||||||||||| |||||||| ||||||||||||||| || || ||||| || |||| ||||    
T  26562752 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 33001289 - 33001357
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 384  Q
    ||||||| | ||||||||||||||| |||||| ||||||| |||||||||| || ||||| || |||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 388
Target Start/End: Original strand, 10339135 - 10339198
Alignment:
Q  326 acatataatta-cattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    ||||||||||| || |||||||| |||||||||||||||| | |||||||| || |||||||||    
T  10339135 acatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgt 10339198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 11424707 - 11424750
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgatttt 355  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  11424707 gacacaacaccaacacatataattatattgaattatatgatttt 11424750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 19044529 - 19044450
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||| |||||| | ||||||||| ||| |||||||| |||| ||||||||||||| |  ||||| || ||||||||||    
T  19044529 ctgacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtc 19044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 21924935 - 21924994
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||| | ||||||||||||| |||||||| |||| ||||||||||||| || |||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtc 21924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 13815505 - 13815451
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||| | |||||||| | ||||||||||| ||||||||||||| ||||    
T  13815505 gacacgacaccgagacatataacttcattgaattatgtgattttctcaaaatatt 13815451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 15443758 - 15443704
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||| ||||||| | ||||||||| |||||||||| | ||||||||||||||||    
T  15443758 gacacaacaccaacatatataattatattgaattatgttattttctcaaattatt 15443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 395
Target Start/End: Original strand, 34290073 - 34290156
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| | |||||  |||||| |||||||| ||||| || ||||||||| |  ||||| |||||||||||| ||||||    
T  34290073 ctgacacgacaccgacacata--attacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtc 34290156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 366
Target Start/End: Complemental strand, 6299554 - 6299521
Alignment:
Q  333 attacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||||| ||||||||||||||||    
T  6299554 attacattgaattatatcattttctcaaattatt 6299521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 366
Target Start/End: Complemental strand, 6306364 - 6306331
Alignment:
Q  333 attacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||||| ||||||||||||||||    
T  6306364 attacattgaattatatcattttctcaaattatt 6306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Original strand, 8389485 - 8389522
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  8389485 tataattacactgaattatatgattttcttaaattatt 8389522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 9195751 - 9195804
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| | ||||||||||||| | |||||| | ||||||||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattatt 9195804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 11591880 - 11591917
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaatt 363  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  11591880 acatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 32298608 - 32298677
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagt 386  Q
    |||||||| ||||||||||||| | |||||| ||||  ||| |||||||| |||||||  ||||||||||    
T  32298608 gacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagt 32298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 32299321 - 32299284
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  32299321 tataactacattgaattatgtgattttctcaaattatt 32299284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 32839660 - 32839725
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||| | || ||||| ||||||||||||||||||  | |||||||||||||  ||||||||||    
T  32839660 ataattatactggattatgtgattttctcaaattattaacagtgtcagcatgtcgatgtctgtgtc 32839725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 33340946 - 33340995
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| |||||| ||| |||||| |||| ||||||||||||||||||    
T  33340946 gacaccaacacatatgattccattgagttatgtgattttctcaaattatt 33340995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 35125152 - 35125103
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| |||||| ||| |||||| |||| ||||||||||||||||||    
T  35125152 gacaccaacacatatgattccattgagttatgtgattttctcaaattatt 35125103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 374
Target Start/End: Complemental strand, 1532289 - 1532241
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    ||||||||||||| |||||||| | ||||| |||||||||| |||||||    
T  1532289 acatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 16833352 - 16833288
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||| ||| ||||||| |||||||||| |  ||||| || ||||||||||||||||    
T  16833352 taattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 16833288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 402
Target Start/End: Complemental strand, 17302601 - 17302529
Alignment:
Q  331 taattacattgaattatatga-ttttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatct 402  Q
    ||||||||||||||||| ||| |||| |||||||||| |  |||||||| |||||||||  ||||||| ||||    
T  17302601 taattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgtccgtatct 17302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 19147910 - 19147842
Alignment:
Q  307 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||| ||||||||||| | ||||||||||||  |||  ||||||||||||| ||||||||  |||||||    
T  19147910 tgtcggacacgacaccgacacatataattactctgatctatatgattttcttaaattattaacggtgtc 19147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 21142167 - 21142127
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| || | |||||||||||||||||||||||||||    
T  21142167 acatataactagactgaattatatgattttctcaaattatt 21142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 24832637 - 24832597
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||| | ||||||| |||||||||||||||||    
T  24832637 acatataattacactaaattataagattttctcaaattatt 24832597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 25038086 - 25038150
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| | |||||| | ||||||||||||||||  |||||||| | ||||||| ||||||||    
T  25038086 taattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtc 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 31579239 - 31579275
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatt 31579275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 99957 - 99879
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||| ||||||||  |||||||  |||||| |||||    
T  99957 tgacacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgtc 99879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 90890 - 90823
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| |||||||||||||||||||||||||||   |||||  |  ||||||||||||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtc 90823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 12606830 - 12606888
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtc 12606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 24362212 - 24362281
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| |||||||| ||||| |||||||||||| |||||||| || |||| |||||||||||    
T  24362212 acatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtc 24362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 375
Target Start/End: Complemental strand, 21465477 - 21465412
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||||| || | ||||||||| ||||||||||||||| |||||||||| || |||||    
T  21465477 ctgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 31236587 - 31236636
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||    
T  31236587 acatataattacattgaattatgtgattttctcaaattattagcagtgtc 31236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 34897134 - 34897085
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  34897134 acatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 37283824 - 37283889
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||| |||||||| ||||||||||| |||||| |||||| | ||||||||||||| |||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtc 37283889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 24669477 - 24669413
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||| | |||| |||||||||||  |||||||||| ||||||||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtc 24669413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 395
Target Start/End: Original strand, 25172693 - 25172777
Alignment:
Q  311 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||||||| | ||||||||||||||| || ||| | ||||| |||||||||| || |||||||||| ||||| || |||||    
T  25172693 tgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtatccgtgtc 25172777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 14634137 - 14634200
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| | ||||||||||| |||||||||| ||||||| ||||| || ||||||||    
T  14634137 gacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgtc 14634200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 392
Target Start/End: Original strand, 20679408 - 20679471
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 392  Q
    |||||||||| |||| ||| |||||||||||||||||| | ||||||  |||||||||||||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 22652039 - 22651956
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||| | || | |||||| |||||||||| ||||||| |||||||||| || ||||| || |||||||||| |||||    
T  22652039 gacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 39954289 - 39954352
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||||||||| | |||||| |||||||||||||||||| |||||||| || |||| |||||    
T  39954289 acatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 4611583 - 4611534
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| |||||||| | |||||||||||||||| ||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtc 4611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 4786338 - 4786411
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||| | ||||||||||||| |||||||| ||||||||| ||||||||   |||||| || ||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 11803321 - 11803268
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattatt 11803268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 11927083 - 11927136
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| | ||||||||||||| |||||||| ||||||| ||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattatt 11927136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 12559107 - 12559156
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||| |||||| |||||| |||||||||| ||||||||||||||||    
T  12559107 gacaccaatacatatgattacactgaattatatcattttctcaaattatt 12559156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 13844596 - 13844669
Alignment:
Q  316 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    ||||||| | ||||||||||||| | |||||| |||||||||||||||||| || ||||| || |||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 4673440 - 4673504
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||| ||||||||| ||||||||||  | ||||| || ||||||||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtc 4673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 20785475 - 20785523
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgt 374  Q
    ||||||||||||||| |||||| |||||| ||||||||||| |||||||    
T  20785475 acatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 24017452 - 24017488
Alignment:
Q  330 ataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||||||||||||| ||||||||||||    
T  24017452 ataattacattgaattatatgattgtctcaaattatt 24017488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 34201056 - 34201096
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatt 34201096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 36934730 - 36934670
Alignment:
Q  315 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||| |||| ||||||||||||| |||||||| ||||||| || ||||||| ||||||||    
T  36934730 acgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtc 36934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 366
Target Start/End: Complemental strand, 3508108 - 3508061
Alignment:
Q  319 caccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattatt 3508061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 12985439 - 12985401
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattatt 366  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  12985439 atatgattacattgaattatgtgattttctcaaattatt 12985401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 14134746 - 14134708
Alignment:
Q  328 atataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattatt 14134708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 396
Target Start/End: Original strand, 31109528 - 31109598
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtcc 396  Q
    ||||||| ||| | |||||| | ||||||||||||||||||  ||||||| || |||||||||| ||||||    
T  31109528 acatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtcc 31109598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 3025597 - 3025560
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattatt 3025560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 11944727 - 11944674
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||| | ||||||||||||| ||| |||| ||||||| ||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattatt 11944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 14731761 - 14731712
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| | |||||| |||||||||||||||||| || |||||    
T  14731761 acatataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 18069154 - 18069191
Alignment:
Q  339 ttgaattatatgattttctcaaattattggcggtgtca 376  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  18069154 ttgaattatttgattttctcaaattattagcggtgtca 18069191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 27213596 - 27213547
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    ||||||||||||| |||||||| ||||||||| |||||||| || |||||    
T  27213596 acatataattacagtgaattatgtgattttctgaaattattagcagtgtc 27213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 395
Target Start/End: Original strand, 28384988 - 28385073
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||| |||||| | ||||||||||||| ||||||||  |||||  ||| ||||||  ||||||| | ||||||||||| |||||    
T  28384988 ctgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtc 28385073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 8798841 - 8798881
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||| |||||||||| | ||||||||||||||||    
T  8798841 acatataattatattgaattatgttattttctcaaattatt 8798881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 12124138 - 12124086
Alignment:
Q  345 tatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 397  Q
    |||||||||||||||||||||| |||||||  || |||| |||||||| ||||    
T  12124138 tatatgattttctcaaattattagcggtgttggcttgtccgtgtctgtatccg 12124086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 18067958 - 18067994
Alignment:
Q  340 tgaattatatgattttctcaaattattggcggtgtca 376  Q
    |||||||| |||||||||||||||||| |||||||||    
T  18067958 tgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 366
Target Start/End: Original strand, 29447128 - 29447160
Alignment:
Q  334 ttacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||| ||||||||||||||||||    
T  29447128 ttacattgaattatgtgattttctcaaattatt 29447160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 37225753 - 37225793
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  37225753 acatatgattacattgaattatgttattttctcaaattatt 37225793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 40332235 - 40332191
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||| |||||||| |||||||||||||||||| || |||||    
T  40332235 taattacactgaattatgtgattttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 395
Target Start/End: Complemental strand, 21149 - 21023
Alignment:
Q  275 ctatgaagcaaggacgcttcttggattaggcgtgtctgacac------gacaccaaaacatataattacattgaattatatgattttctcaaattattgg 368  Q
    |||||||||| |||  ||||| ||||||||||||||||||||      || ||| | ||||||||||| |  || |||| ||||||||||||||||||      
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaa 21050  T
Q  369 cggtgtcagcatgtcagtgtctgtgtc 395  Q
    | ||||||||||||||||||| |||||    
T  21049 ccgtgtcagcatgtcagtgtccgtgtc 21023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 44521 - 44592
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 383  Q
    ||||||| ||| | ||||||||||||| |||||||| ||||||||||||||| || ||||||||||| ||||    
T  44521 gacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcagcttgtc 44592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 28918 - 28837
Alignment:
Q  307 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||||||||| ||||| | ||||||||||||||||||||||  |||||||| ||||||||  ||||||| || ||| |||||    
T  28918 tgtctgacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgt 28837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 53243 - 53170
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcag 385  Q
    |||||| |||| | || |||||||||| |||||||| |||||||||||||||||||||||| || || ||||||    
T  53243 gacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 135302 - 135391
Alignment:
Q  306 gtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||| ||||||||||| | |||||||||||||  ||||||| |||||||||||||||||| || ||||| |  |||  |||||||||||    
T  135302 gtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtc 135391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 137845 - 137789
Alignment:
Q  310 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||||||||||| |||||| | |||| |||||| | ||||||||| ||||||||    
T  137845 ctgacacgacaccaacacatatgactacactgaattgtgtgattttcttaaattatt 137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 9744 - 9819
Alignment:
Q  313 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 388  Q
    |||||||||| | ||||||||||||| |||||||  |||||||||||||||||| | || ||| ||||||| ||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgtgt 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 92851 - 92793
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 389  Q
    |||||||| |||||||| | |||||||||||||||| |||||||| || ||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 26442 - 26373
Alignment:
Q  326 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||  |||||||||||| |||||||||||||||||| | ||||||  | ||||| ||||||||||    
T  26442 acatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 240022 - 240071
Alignment:
Q  317 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    |||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  240022 gacaccgacacatatgattacattgaattatattattttctcaaattatt 240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1449 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 1262 - 1305
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgatttt 355  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||    
T  1262 gacacgacaccaaaatatataattacatcgaattatataatttt 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 263368 - 263451
Alignment:
Q  312 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||  | || |||||||||| |||||||| || ||||||||||||||| || ||||   |||||||||||| |||||    
T  263368 gacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtc 263451  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 23490 - 23400
Alignment:
Q  305 cgtgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||| ||||||||||| | || |||||||||| |||||||| ||||||| |  | |||||  | ||||| || ||||||||||||||||    
T  23490 cgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtc 23400  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Complemental strand, 102948 - 102914
Alignment:
Q  332 aattacattgaattatatgattttctcaaattatt 366  Q
    |||||||||||||||||| ||||||||||||||||    
T  102948 aattacattgaattatatcattttctcaaattatt 102914  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 395
Target Start/End: Original strand, 225281 - 225347
Alignment:
Q  329 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||||||||||| ||||| | ||||||||||||||||  | ||||| || |||||||||| |||||    
T  225281 tataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtc 225347  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 6372 - 6312
Alignment:
Q  315 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 375  Q
    |||||||| | ||||||||||||||||||||||   ||||| |||||||||| || |||||    
T  6372 acgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

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Target: scaffold0320 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 17038 - 17086
Alignment:
Q  318 acaccaaaacatataattacattgaattatatgattttctcaaattatt 366  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||    
T  17038 acaccaacacatataattacattgatttatgccattttctcaaattatt 17086  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 13444 - 13380
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||| || |||||||| |||||||||||||||||| |  ||||| || |||||||||| |||||    
T  13444 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 21883 - 21947
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    ||||| || |||||||| |||||||||||||||||| |  ||||| || |||||||||| |||||    
T  21883 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 3864 - 3928
Alignment:
Q  331 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 395  Q
    |||||||| |||||||| ||||||| | ||||||||  | ||||| |||| ||||||||||||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtc 3928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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