View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0614_low_27 (Length: 206)
Name: NF0614_low_27
Description: NF0614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0614_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29671898 - 29672012
Alignment:
| Q |
1 |
ctcagaagaatcttcagcattctttgataaaaccccgaacctcgagactttctccttatcgtaaacaacaggcgacccaccacggatcatttcacccaat |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29671898 |
ctcagaagaatcttcagcattcttggataaaaccccgaacctcgagactttctccttatcgtaaacaacaggcgacccaccacggatcatttcacccaat |
29671997 |
T |
|
| Q |
101 |
ttaaacacaacttgt |
115 |
Q |
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||||||||||||||| |
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| T |
29671998 |
ttaaacacaacttgt |
29672012 |
T |
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