View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0614_low_9 (Length: 366)
Name: NF0614_low_9
Description: NF0614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0614_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 119 - 356
Target Start/End: Original strand, 46998558 - 46998795
Alignment:
| Q |
119 |
actttggaacatttgacgccactttcacccatgtcagtgttgatggaaaccccaaaatccgacacattcgtctatcttctacaatccgctatcaaatcca |
218 |
Q |
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| T |
46998558 |
actttagaacatttgacgccactttcacccatgtcagtgttgatggaaaccccaaaatccgacacattcgtctatcttctacaatccgctatcaaatcca |
46998657 |
T |
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| Q |
219 |
gagacactgtcacaggaagattcattcacgctcgaatcatcaaacacggtcttcacctcagcgttttcttgatgaacaatcttctaaatttctactcaaa |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46998658 |
gagacactgtcacaggaagattcattcacgctcgaatcatcaaacacggtcttcacctcagcgttttcttgatgaacaatcttctaaatttctactcaaa |
46998757 |
T |
|
| Q |
319 |
aaccgcctctttcaacgatgcacaccgtctattctctg |
356 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
46998758 |
aaccgcctctttcaacgatgcacaccgtctattctctg |
46998795 |
T |
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