View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0615_low_1 (Length: 331)

Name: NF0615_low_1
Description: NF0615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0615_low_1
NF0615_low_1
[»] chr6 (28 HSPs)
chr6 (148-252)||(31786444-31786547)
chr6 (255-324)||(10339053-10339122)
chr6 (255-331)||(8365447-8365523)
chr6 (255-324)||(4877994-4878062)
chr6 (268-315)||(21068084-21068131)
chr6 (255-321)||(17327589-17327655)
chr6 (257-323)||(17841530-17841596)
chr6 (259-324)||(32978842-32978907)
chr6 (255-331)||(10294162-10294238)
chr6 (255-331)||(18367891-18367967)
chr6 (268-312)||(21044826-21044870)
chr6 (256-324)||(28152149-28152217)
chr6 (257-321)||(31384984-31385048)
chr6 (256-324)||(34595185-34595253)
chr6 (256-331)||(16766752-16766827)
chr6 (256-321)||(9629448-9629513)
chr6 (256-324)||(9522953-9523021)
chr6 (256-331)||(16488519-16488594)
chr6 (268-314)||(21090632-21090678)
chr6 (255-292)||(426477-426514)
chr6 (268-324)||(853811-853867)
chr6 (255-312)||(8776907-8776964)
chr6 (255-292)||(10649371-10649408)
chr6 (255-324)||(28715346-28715415)
chr6 (256-292)||(5732474-5732510)
chr6 (256-324)||(7378030-7378098)
chr6 (256-320)||(17435265-17435329)
chr6 (256-324)||(24645532-24645600)
[»] chr1 (36 HSPs)
chr1 (254-324)||(37598882-37598952)
chr1 (256-324)||(32461393-32461461)
chr1 (257-324)||(40258874-40258941)
chr1 (256-306)||(2218297-2218347)
chr1 (255-319)||(6427531-6427595)
chr1 (255-331)||(40917804-40917880)
chr1 (255-329)||(25934673-25934747)
chr1 (255-331)||(9828099-9828175)
chr1 (258-322)||(16297223-16297287)
chr1 (256-324)||(18337380-18337448)
chr1 (258-321)||(1486646-1486709)
chr1 (256-307)||(1704935-1704986)
chr1 (268-331)||(6612112-6612175)
chr1 (256-311)||(17831462-17831517)
chr1 (256-331)||(47989552-47989627)
chr1 (255-324)||(1815308-1815377)
chr1 (254-331)||(31694637-31694714)
chr1 (255-324)||(51410076-51410145)
chr1 (256-324)||(22515827-22515895)
chr1 (256-324)||(46348323-46348391)
chr1 (256-311)||(18556385-18556440)
chr1 (286-324)||(21530740-21530778)
chr1 (285-331)||(27471524-27471570)
chr1 (256-310)||(34712323-34712377)
chr1 (258-324)||(42359391-42359457)
chr1 (257-311)||(48415667-48415720)
chr1 (255-324)||(5898205-5898274)
chr1 (256-301)||(6574051-6574096)
chr1 (268-321)||(19562567-19562620)
chr1 (255-324)||(39130706-39130775)
chr1 (270-327)||(40181919-40181976)
chr1 (257-305)||(10233326-10233374)
chr1 (257-317)||(10577676-10577736)
chr1 (256-292)||(16812639-16812675)
chr1 (256-292)||(27965940-27965976)
chr1 (256-324)||(38078601-38078669)
[»] chr4 (37 HSPs)
chr4 (255-324)||(16073445-16073514)
chr4 (256-324)||(23292926-23292994)
chr4 (257-331)||(30982808-30982882)
chr4 (256-321)||(28964188-28964253)
chr4 (257-321)||(3947702-3947766)
chr4 (244-331)||(19482723-19482810)
chr4 (255-305)||(18513174-18513224)
chr4 (258-307)||(22440559-22440608)
chr4 (255-324)||(24613629-24613698)
chr4 (257-321)||(14465006-14465070)
chr4 (256-324)||(34306744-34306812)
chr4 (256-324)||(49431077-49431145)
chr4 (256-331)||(5414101-5414176)
chr4 (259-310)||(28084589-28084640)
chr4 (256-329)||(903979-904052)
chr4 (256-309)||(18966575-18966628)
chr4 (258-331)||(19312390-19312463)
chr4 (256-312)||(715545-715601)
chr4 (256-312)||(752871-752927)
chr4 (255-331)||(16184875-16184951)
chr4 (255-331)||(22234818-22234894)
chr4 (256-331)||(24343556-24343632)
chr4 (256-312)||(29205531-29205587)
chr4 (257-304)||(5922532-5922579)
chr4 (258-309)||(7424724-7424774)
chr4 (254-324)||(4672023-4672093)
chr4 (261-331)||(30838265-30838335)
chr4 (256-310)||(42640589-42640643)
chr4 (255-312)||(3064867-3064924)
chr4 (255-292)||(11596296-11596333)
chr4 (255-304)||(17876237-17876286)
chr4 (272-321)||(38846968-38847017)
chr4 (256-324)||(2361915-2361983)
chr4 (256-324)||(8423658-8423726)
chr4 (256-324)||(12895214-12895282)
chr4 (257-305)||(40965341-40965389)
chr4 (255-330)||(53381529-53381605)
[»] chr3 (28 HSPs)
chr3 (255-324)||(40993274-40993343)
chr3 (255-331)||(41961578-41961654)
chr3 (258-312)||(28918066-28918120)
chr3 (256-324)||(18427000-18427068)
chr3 (256-324)||(55401126-55401194)
chr3 (255-310)||(5407198-5407253)
chr3 (255-322)||(7171554-7171621)
chr3 (279-324)||(10955003-10955048)
chr3 (257-312)||(15999951-16000006)
chr3 (258-324)||(4987222-4987288)
chr3 (256-321)||(27505305-27505370)
chr3 (257-305)||(1389908-1389956)
chr3 (256-324)||(13845465-13845533)
chr3 (255-331)||(14209168-14209244)
chr3 (257-321)||(14216957-14217021)
chr3 (257-321)||(14223086-14223150)
chr3 (256-324)||(20503516-20503584)
chr3 (256-320)||(34185052-34185116)
chr3 (280-331)||(14832154-14832205)
chr3 (256-306)||(2408590-2408640)
chr3 (267-321)||(3631738-3631792)
chr3 (256-306)||(11610578-11610628)
chr3 (257-306)||(51512118-51512167)
chr3 (258-306)||(24204983-24205031)
chr3 (258-306)||(25775576-25775624)
chr3 (255-327)||(26492144-26492216)
chr3 (256-324)||(35222989-35223057)
chr3 (255-307)||(40052380-40052432)
[»] chr5 (29 HSPs)
chr5 (256-324)||(42893411-42893479)
chr5 (256-331)||(32766872-32766947)
chr5 (256-320)||(21576685-21576749)
chr5 (256-331)||(21522805-21522880)
chr5 (256-331)||(21533371-21533446)
chr5 (257-331)||(21542085-21542159)
chr5 (256-321)||(31084382-31084447)
chr5 (259-324)||(39268541-39268606)
chr5 (260-324)||(30098982-30099046)
chr5 (256-331)||(39698596-39698671)
chr5 (257-331)||(6401553-6401627)
chr5 (258-324)||(21190998-21191064)
chr5 (258-324)||(30502330-30502396)
chr5 (258-324)||(30542673-30542739)
chr5 (255-321)||(32630674-32630740)
chr5 (255-324)||(28588613-28588682)
chr5 (256-321)||(30098391-30098456)
chr5 (255-324)||(43564932-43565001)
chr5 (256-331)||(21814316-21814391)
chr5 (255-322)||(27932288-27932355)
chr5 (258-321)||(43001859-43001922)
chr5 (255-309)||(14873588-14873642)
chr5 (269-327)||(26312817-26312875)
chr5 (255-324)||(11686000-11686069)
chr5 (268-324)||(15382536-15382592)
chr5 (256-324)||(17123099-17123166)
chr5 (256-304)||(19820328-19820376)
chr5 (258-318)||(23015926-23015986)
chr5 (280-312)||(30183623-30183655)
[»] chr2 (24 HSPs)
chr2 (256-324)||(26769573-26769641)
chr2 (257-324)||(28596520-28596587)
chr2 (256-331)||(30717459-30717534)
chr2 (256-331)||(35056923-35056998)
chr2 (256-324)||(24009346-24009414)
chr2 (255-331)||(37419798-37419874)
chr2 (269-324)||(12224274-12224329)
chr2 (258-324)||(2438661-2438727)
chr2 (256-331)||(32749754-32749829)
chr2 (256-322)||(11223793-11223858)
chr2 (258-324)||(19942316-19942382)
chr2 (255-321)||(34993921-34993987)
chr2 (256-322)||(38117099-38117165)
chr2 (256-321)||(42511322-42511387)
chr2 (256-324)||(27084320-27084388)
chr2 (256-331)||(36096304-36096379)
chr2 (258-320)||(15657930-15657992)
chr2 (254-324)||(15972924-15972994)
chr2 (267-324)||(5040785-5040842)
chr2 (255-292)||(19536360-19536397)
chr2 (255-324)||(20242666-20242735)
chr2 (256-312)||(3414928-3414984)
chr2 (256-312)||(21782744-21782800)
chr2 (256-324)||(37559028-37559096)
[»] chr8 (27 HSPs)
chr8 (256-331)||(34450961-34451036)
chr8 (256-324)||(31557047-31557115)
chr8 (256-331)||(22652031-22652106)
chr8 (257-324)||(29447040-29447107)
chr8 (255-317)||(18407777-18407839)
chr8 (256-322)||(36450694-36450760)
chr8 (255-324)||(5813643-5813712)
chr8 (255-324)||(29510232-29510301)
chr8 (256-327)||(12570438-12570509)
chr8 (256-327)||(12570664-12570735)
chr8 (256-331)||(21465467-21465542)
chr8 (256-331)||(26902104-26902179)
chr8 (252-321)||(8343381-8343450)
chr8 (256-324)||(3951476-3951544)
chr8 (258-321)||(3025605-3025668)
chr8 (256-331)||(15816058-15816133)
chr8 (256-331)||(29447499-29447574)
chr8 (257-324)||(43737752-43737819)
chr8 (256-322)||(11803323-11803389)
chr8 (258-320)||(15023199-15023261)
chr8 (255-321)||(22197670-22197736)
chr8 (256-320)||(6065586-6065650)
chr8 (256-312)||(14134762-14134818)
chr8 (268-312)||(22943301-22943345)
chr8 (256-324)||(33405324-33405392)
chr8 (256-292)||(34260390-34260426)
chr8 (258-306)||(44067596-44067644)
[»] scaffold0306 (1 HSPs)
scaffold0306 (258-324)||(13457-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (258-324)||(21804-21870)
[»] chr7 (22 HSPs)
chr7 (255-321)||(5409770-5409836)
chr7 (255-321)||(9778559-9778625)
chr7 (256-324)||(21880203-21880271)
chr7 (256-331)||(24339697-24339772)
chr7 (256-331)||(25822710-25822785)
chr7 (255-312)||(7438780-7438837)
chr7 (256-324)||(598259-598327)
chr7 (256-312)||(29763129-29763185)
chr7 (255-327)||(1401073-1401143)
chr7 (256-321)||(1433513-1433578)
chr7 (256-324)||(7133212-7133281)
chr7 (255-324)||(15680860-15680929)
chr7 (256-321)||(43027404-43027469)
chr7 (256-300)||(5307331-5307375)
chr7 (257-324)||(32287404-32287471)
chr7 (256-321)||(32093954-32094020)
chr7 (271-320)||(15836439-15836488)
chr7 (256-321)||(21138931-21138996)
chr7 (256-305)||(28155624-28155673)
chr7 (256-320)||(21864863-21864927)
chr7 (260-312)||(27229244-27229296)
chr7 (255-299)||(35862027-35862071)
[»] scaffold0380 (1 HSPs)
scaffold0380 (255-312)||(8664-8721)
[»] scaffold0053 (1 HSPs)
scaffold0053 (256-324)||(8849-8917)
[»] scaffold0003 (1 HSPs)
scaffold0003 (256-331)||(241649-241724)
[»] scaffold0361 (1 HSPs)
scaffold0361 (256-322)||(14580-14646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (255-331)||(71780-71856)
[»] scaffold0652 (1 HSPs)
scaffold0652 (257-324)||(403-470)
[»] scaffold0450 (1 HSPs)
scaffold0450 (256-331)||(8564-8639)
[»] scaffold0623 (1 HSPs)
scaffold0623 (257-331)||(5926-6000)
[»] scaffold0136 (1 HSPs)
scaffold0136 (254-331)||(3776-3853)
[»] scaffold0050 (1 HSPs)
scaffold0050 (279-324)||(70329-70374)
[»] scaffold0004 (1 HSPs)
scaffold0004 (257-322)||(92875-92940)
[»] scaffold0793 (1 HSPs)
scaffold0793 (256-312)||(4821-4877)
[»] scaffold0512 (1 HSPs)
scaffold0512 (256-324)||(4976-5044)
[»] scaffold0279 (1 HSPs)
scaffold0279 (287-331)||(17840-17884)
[»] scaffold0057 (1 HSPs)
scaffold0057 (255-331)||(24079-24156)
[»] scaffold0697 (1 HSPs)
scaffold0697 (286-324)||(1695-1733)
[»] scaffold0475 (1 HSPs)
scaffold0475 (255-321)||(3362-3428)
[»] scaffold0020 (1 HSPs)
scaffold0020 (256-306)||(135263-135313)
[»] scaffold0008 (1 HSPs)
scaffold0008 (258-331)||(263303-263376)


Alignment Details
Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 31786444 - 31786547
Alignment:
Q  148 cagtccaaaaaattggtctacatatttttcttattcttaatatattgtaaaaagaattttaaatcgacagaagaatgagtaataatatatgagaaaattt 247  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  31786444 cagttcaaaaaattgatctacatatttttcttattcttaatatattataaaaagaattttaaattgacagaagaatgagtaataatatatgag-aaattt 31786542  T
Q  248 gttat 252  Q
    |||||    
T  31786543 gttat 31786547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 10339053 - 10339122
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| ||||||||||  |||||||||||||| ||||||||||| ||||||| |||||||||||    
T  10339053 cctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccga 10339122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 8365447 - 8365523
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| ||| ||||||  |||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||    
T  8365447 cctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgaca 8365523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 4878062 - 4877994
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| ||||||||||  ||||||||||||||| |||||||||| ||||||| |||||||||||    
T  4878062 cctatgaagcacggacactcctcggattaggcgtgtcct-gtgtcggacatgtgtcgtgtccgacaccga 4877994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 21068084 - 21068131
Alignment:
Q  268 gacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatc 315  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  21068084 gacactccttagattaggcgtgtcccagtgtcggacacatgtcgtatc 21068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 17327589 - 17327655
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||||| ||||||||||  ||||||||||||||  ||||| |||||||||||| ||||||||    
T  17327589 cctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 17841530 - 17841596
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccg 323  Q
    ||||||||| ||||||||||  |||||||||||||  |||||||||||| |||||| ||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccg 17841596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 32978842 - 32978907
Alignment:
Q  259 tgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||| ||||||||||| |||||| |||||||  |||||||||| ||||||| |||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccga 32978907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 10294238 - 10294162
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||||  ||||||||| |||||||  |||||||||| |||||||| |||||| ||||||||| | ||||||    
T  10294238 cctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgaca 10294162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 18367967 - 18367891
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| ||||||||||| ||| ||||||||||  ||||| |||| ||||||| || |||||||| ||||||    
T  18367967 cctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgaca 18367891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 21044826 - 21044870
Alignment:
Q  268 gacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  21044826 gacactccttagattaggcgtgtcccagtgtcggacacatgtcgt 21044870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 28152217 - 28152149
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| | ||||||||  |||||||| |||||  |||||||||||||||||| |||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccga 28152149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 31385048 - 31384984
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||| ||||||||||| ||||||||||||||  |||| ||||||||||||| ||| ||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacac 31384984  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 34595253 - 34595185
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  ||||||| ||||||  ||||| |||||||||||| |||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccga 34595185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 16766827 - 16766752
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||| || |  ||||||||||||||  ||||||||||||||| || ||||||||||| ||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgaca 16766752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 9629513 - 9629448
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||||||||||||||  |||||| ||||||  |||||||||||| ||| || ||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 9523021 - 9522953
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||||  ||  || |||||||||||||   ||||||||||||||||| ||||||||||||    
T  9523021 ctatgaagcatggatgctatttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccga 9522953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 16488519 - 16488594
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| | ||| ||||| ||| ||||||||||  ||| | |||||||||||| ||||||||||| ||||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgaca 16488594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 21090632 - 21090678
Alignment:
Q  268 gacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtat 314  Q
    ||||||||||||||||||||| ||| |||||| ||||| ||||||||    
T  21090632 gacactccttagattaggcgtatcccagtgtcagacacatgtcgtat 21090678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 426477 - 426514
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  426477 cctatgaagcacggacactcctcagattaggcgtgtcc 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 853811 - 853867
Alignment:
Q  268 gacactccttagattaggcgtgtc-ctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||| || ||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  853811 gacactcattggattaggcgtgtctcta-tgtcggacacatgtcgtatccgacaccga 853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 8776907 - 8776964
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||||||||| ||||||||||  ||||||| |||||   ||||||||||||||||||    
T  8776907 cctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgt 8776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 10649408 - 10649371
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  10649408 cctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 28715415 - 28715346
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| | ||||| ||   |||||||||||||  |||||| ||||||||||| |||||||||||    
T  28715415 cctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccga 28715346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 5732474 - 5732510
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    |||||||||||||||||||||  ||||||||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 7378098 - 7378030
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||| || ||||||| |||||||  ||||||||  | |||||| |||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccga 7378030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 17435329 - 17435265
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    |||||||| | |||||||  | ||||||| ||||||| ||||||| ||||||||||| |||||||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgaca 17435265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 24645600 - 24645532
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||  ||||||| |  |||||| |||||| | |||||||||||||||||| || ||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccga 24645532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 37598952 - 37598882
Alignment:
Q  254 ccctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||||| ||||||||||  |||||||||||||| | ||||||||||||||||| |||||||||||    
T  37598952 ccctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccga 37598882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 32461393 - 32461461
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||| ||| |||||||||||||| |||||| |||||||||||| |||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccga 32461461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 40258874 - 40258941
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||| || ||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccga 40258941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 2218347 - 2218297
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacg 2218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 6427595 - 6427531
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgac 319  Q
    ||||||||||| |||||||| | |||||||||||||||  |||||||||||||||||| ||||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 40917880 - 40917804
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| ||||| ||||  ||||||||||||||  |||||||||||||||||| ||| ||||||| ||||||    
T  40917880 cctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgaca 40917804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 25934747 - 25934673
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacga 329  Q
    ||||||||||| ||||||||||| ||| |||||| |||  ||||| |||||||||||| ||||||||||| ||||    
T  25934747 cctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacga 25934673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 9828175 - 9828099
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| ||||||||||  |||||| |||||||  |||||||||||||||||| || ||||| || ||||||    
T  9828175 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgaca 9828099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    |||||||| ||||||||||  ||||||||||||||| |||||||||||  ||||| |||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 18337448 - 18337380
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  ||| |||| ||||| |||||||||||||||| || |||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccga 18337380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 1486646 - 1486709
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||  |||||||||  ||||||||||||||  |||||||||||||||||| ||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 1704935 - 1704986
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgt 307  Q
    |||||||||||||||||||||| |||||||||||||   |||||||||||||    
T  1704935 ctatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacgt 1704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 6612112 - 6612175
Alignment:
Q  268 gacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||||||| ||||||||||| | |||| ||||||| ||| ||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgaca 6612175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 311
Target Start/End: Original strand, 17831462 - 17831517
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcg 311  Q
    ||||||| ||||||||||||| |||||||||||||||  ||||||||||| |||||    
T  17831462 ctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtcg 17831517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 47989627 - 47989552
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||  ||||||||||||||   |||| |||| ||||||| ||||||||||| ||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgaca 47989552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 1815377 - 1815308
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| || || ||||||| |||||||||||||||  |||||||||| ||||||| || ||||||||    
T  1815377 cctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccga 1815308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 31694637 - 31694714
Alignment:
Q  254 ccctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||||| |||||||||| ||||||||||||| |  |||||| | | |||| || ||||||||||| ||||||    
T  31694637 ccctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgaca 31694714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 51410145 - 51410076
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| | | ||||||| |||||||||||||   |||||||| ||||||||| |||||||||||    
T  51410145 cctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccga 51410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 22515827 - 22515895
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  |||||||||||||   |||||||| | ||||||| |||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccga 22515895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 46348323 - 46348391
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| |||||| |||  ||| |||||||||   |||||||||||||||||| |||||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccga 46348391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 311
Target Start/End: Original strand, 18556385 - 18556440
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcg 311  Q
    |||||||||| ||||||| ||  |||||||||||||| ||||||||| ||||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcg 18556440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 21530778 - 21530740
Alignment:
Q  286 cgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccga 21530740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 27471524 - 27471570
Alignment:
Q  285 gcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||  |||||||||||||||||||||| ||||||||| ||||    
T  27471524 gcgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgaca 27471570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 34712323 - 34712377
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtc 310  Q
    |||||||||| |||||||||||  ||||| ||||||| ||||| |||||||||||    
T  34712323 ctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtc 34712377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 42359391 - 42359457
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| ||||||||||  ||||||||||||||  |||||||||||  ||| | |||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccga 42359457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 48415667 - 48415720
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcg 311  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||  ||||||||||    
T  48415667 tatgaagcacggacactccttggattaggcgtgtcct-gtgtccaacacgtgtcg 48415720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 5898205 - 5898274
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||| ||||| ||||||||||  |||||| |||||||  |||| ||||||||||||| || ||||||||    
T  5898205 cctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccga 5898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 6574096 - 6574051
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcgg 301  Q
    |||||||||| || |||||||| |||||||||||||| ||||||||    
T  6574096 ctatgaagcacggtcactccttggattaggcgtgtcccagtgtcgg 6574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 19562567 - 19562620
Alignment:
Q  268 gacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||  ||||||| ||||||  ||||||||||||||| |||||||||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacac 19562620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 39130706 - 39130775
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||| ||||||||||||||| || ||||| |||||||| | |||||  ||||||| || |||||||||||    
T  39130706 cctacgaagcatggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccga 39130775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 40181976 - 40181919
Alignment:
Q  270 cactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatac 327  Q
    |||||||  ||||||||||||||  |||| |||||||||| || ||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatac 40181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 10233374 - 10233326
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacac 305  Q
    ||||||||| ||||||||||  ||||||| ||||||| |||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 10577676 - 10577736
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccg 317  Q
    ||||||||| ||||||||||| ||| ||||||||||  ||||| |||||| ||||| ||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccg 10577736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 16812675 - 16812639
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    |||||||||| |||||||||| |||||||||||||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcc 16812639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 27965940 - 27965976
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    |||||||||||||||||||||  ||||||||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcc 27965976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 38078601 - 38078669
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| | | ||||||  ||||||||||||||| |||| | ||| ||||||| |||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccga 38078669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 16073514 - 16073445
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||| || |||| |||||||||||    
T  16073514 cctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccga 16073445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 23292926 - 23292994
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  ||||||||||||||  |||||||||||||||||| |||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccga 23292994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 30982808 - 30982882
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||| |||||||| || ||||||||||||||  |||||||||||||||||| || |||||||| ||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgaca 30982882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 28964188 - 28964253
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| | ||||||| ||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacac 28964253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| ||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 19482810 - 19482723
Alignment:
Q  244 atttgttatcccctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||| | ||||||||||| | ||||||||  ||||||| |||||| ||||||||||||||||||| ||| | ||||| ||||||    
T  19482810 atttgttaacacctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgaca 19482723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 18513174 - 18513224
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacac 305  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  18513174 cctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 22440559 - 22440608
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgt 307  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgt 22440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 24613629 - 24613698
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| ||||||||||  |||||| |||||||| ||||| |||||||||||| || ||||||||    
T  24613629 cctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccga 24613698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 14465006 - 14465070
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||| ||||||||||| || |||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 34306744 - 34306812
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| | ||| |||| ||||||||||||||   |||||||||||||||||| |||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccga 34306812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 49431145 - 49431077
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||| ||||||||||||||||  ||| ||||||||||  |||| ||||||||||||| |||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccga 49431077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 5414101 - 5414176
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||| ||| ||| ||||||  ||||| |||||||||||| |||||||| || ||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgaca 5414176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 28084640 - 28084589
Alignment:
Q  259 tgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtc 310  Q
    ||||||| ||||||||||  |||||||||||||| |||||||||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 904052 - 903979
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacga 329  Q
    |||||||||| ||||| | ||| ||||||  |||||| |||||||||||| |||||| ||| ||||||||||||    
T  904052 ctatgaagcaaggacatttcttggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacga 903979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 18966628 - 18966575
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgt 309  Q
    |||||||||| |||||||||||||||||||||| |||   ||||||||||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgt 18966575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 19312463 - 19312390
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||| || ||||||| || ||||||| ||||||   |||||||||||||||||||||||||| ||| ||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgaca 19312390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 715545 - 715601
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||| ||||||||||  ||||||||||||||  |||||||||| |||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgt 715601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 752871 - 752927
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||| ||||||||||  ||||||||||||||  |||||||||| |||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgt 752927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 16184951 - 16184875
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||||   ||||||||  |||||||||||||| ||||||||||| |  |||||| ||||||||| ||||||    
T  16184951 cctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatcgtatgcgacaccgacacgaca 16184875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 22234818 - 22234894
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| | ||||| ||  ||||||  ||||||| |||||||||||||||||| || |||||||| ||||||    
T  22234818 cctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgaca 22234894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 24343632 - 24343556
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtc-gtatccgacaccgatacgaca 331  Q
    |||||||||| |||||||||| ||| |||||||||||  |||||||||||| ||| || || |||||||| ||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgaca 24343556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 29205587 - 29205531
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||| | ||||||||  |||||||||||||| ||||||||||| |||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgt 29205531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggaca 304  Q
    |||||||||  ||||||||| ||||||||||||||| |||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 7424774 - 7424724
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgt 309  Q
    |||||||||||||||||||| |||||||||||| |  |||||||||||||||    
T  7424774 atgaagcatggacactccttggattaggcgtgtac-ggtgtcggacacgtgt 7424724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 4672023 - 4672093
Alignment:
Q  254 ccctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||  |||||||||| |||||| | ||| | ||||||| |||||| | ||||||||||||||    
T  4672023 ccctatgaagcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccga 4672093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 30838335 - 30838265
Alignment:
Q  261 aagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||| ||||||||||  | ||||||||||| | |||||||||||||||||  |||||||| || ||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgaca 30838265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 42640643 - 42640589
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtc 310  Q
    |||||||||| ||| ||||||  ||||||||||||||| ||| ||||||||||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtc 42640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 3064867 - 3064924
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||||||||| ||||||||||  |||||||||||||  || |||||||| |||||||    
T  3064867 cctatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgt 3064924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 11596296 - 11596333
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  11596296 cctatgaagcacggacactcctcagattaggcgtgtcc 11596333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 17876286 - 17876237
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggaca 304  Q
    |||||||||||  |||||||||| ||||||| ||||||| ||||||||||    
T  17876286 cctatgaagcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 38846968 - 38847017
Alignment:
Q  272 ctccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||| ||||||||  ||| || |||||||||||||||||||||||||||    
T  38846968 ctcctcagattaggtatgttctggtgtcggacacgtgtcgtatccgacac 38847017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 2361915 - 2361983
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| |||||||| | |||||||| |||||   ||||| |||||| ||||| |||||||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccga 2361983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 8423658 - 8423726
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||| ||| ||||||| ||  ||||||||||||||  ||||||||||  |||||| |||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccga 8423726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 12895214 - 12895282
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| | ||||||||  ||||||||||||||   ||||||| || |||||| |||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccga 12895282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacac 305  Q
    |||||||||  ||||||||| |||||||||||||| | |||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 53381529 - 53381605
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtc-gtatccgacaccgatacgac 330  Q
    ||||||||||| ||||||||||  ||||||| ||||||  |||||||| ||| ||| || ||||||||||| |||||    
T  53381529 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacacgac 53381605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 40993274 - 40993343
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||||||| ||||||| |||||||||||    
T  40993274 cctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccga 40993343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 41961578 - 41961654
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| ||||||| ||  |||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||    
T  41961578 cctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgaca 41961654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 28918120 - 28918066
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgt 28918066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 18427068 - 18427000
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||| || |||||||||| |||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccga 18427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 55401194 - 55401126
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  |||||||||||||   |||||||||||||||||| |||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccga 55401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 5407198 - 5407253
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtc 310  Q
    |||||||||||||||||||| || ||||||||||||||| | ||||||||||||||    
T  5407198 cctatgaagcatggacactctttggattaggcgtgtcctggcgtcggacacgtgtc 5407253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 7171621 - 7171554
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    ||||||||||||  ||||||||| |||||||||||||   |||||||||||||||||| |||||||||    
T  7171621 cctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacacc 7171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 10955048 - 10955003
Alignment:
Q  279 gattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||    
T  10955048 gattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccga 10955003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 312
Target Start/End: Original strand, 15999951 - 16000006
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||| ||| ||||||||||| ||||||||||||||  ||||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgt 16000006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 4987222 - 4987288
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||| | ||||||||||  ||||||||||||||  |||||||||||||||||| ||| |||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccga 4987288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 27505370 - 27505305
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||| ||||||||||  |||||||| |||||  |||||||||||||||||| || |||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacac 305  Q
    ||||||||| ||||||||||| |||||||| |||||| |||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 13845465 - 13845533
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||| ||| |||||||||   ||||| ||||||| |||| |||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccga 13845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 14209244 - 14209168
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| ||||||| ||| ||||||| || |||   ||||| ||||||||||| ||||||||||| ||||||    
T  14209244 cctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgaca 14209168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 14217021 - 14216957
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||| ||||||| ||  ||||||| |||||| ||||||| ||||||||||| ||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 14223150 - 14223086
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||| ||||||| ||  ||||||| |||||| ||||||| ||||||||||| ||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 20503584 - 20503516
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  ||||||||||||||  ||||| |||| ||||||| ||| |||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccga 20503516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 34185052 - 34185116
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    |||||||||| ||||||||||  ||||||||||||||  ||||||||||| |||| | |||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 14832205 - 14832154
Alignment:
Q  280 attaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||||||  |||||||||||||||||| ||||| ||||| ||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgaca 14832154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 2408590 - 2408640
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    |||||||||| ||| ||||||||||||||||||||||  |||||| |||||    
T  2408590 ctatgaagcacggagactccttagattaggcgtgtcccggtgtcgaacacg 2408640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 3631792 - 3631738
Alignment:
Q  267 ggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||||  || |||||||||||| |||||||||| ||||||| ||||||||    
T  3631792 ggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 11610628 - 11610578
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    |||||||||| |||||||||| |||||||||||||||   |||||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 51512118 - 51512167
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||||||    
T  51512118 tatgaagcgcggacactccttaggttaggcgtgtcctggtgtcagacacg 51512167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 24204983 - 24205031
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    |||||||| ||||||||||   |||||||||||||| ||||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 24205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 25775624 - 25775576
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    |||||||| | ||||||||  ||||||||||||||| ||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacg 25775576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 26492144 - 26492216
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatac 327  Q
    ||||||||||  ||||| ||||  |||||| |||||| | ||||| |||| ||||||| ||||||||||||||    
T  26492144 cctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatac 26492216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 35223057 - 35222989
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  ||| | ||||||||  ||||| |||||||||| | |||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccga 35222989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 40052432 - 40052380
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgt 307  Q
    ||||||||||| | ||||||||  ||||||||||||||  |||||||||||||    
T  40052432 cctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 42893479 - 42893411
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||||||||| || || ||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccga 42893411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 32766872 - 32766947
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| |||||||||| ||||||| ||| |||| |||||||||||||||||| | ||||||||| ||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgaca 32766947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 21576685 - 21576749
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||| |||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgaca 21576749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 21522880 - 21522805
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||| ||| |||||||| || ||||||||||||||  ||| |||||||||||||| ||||||||||| ||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgaca 21522805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 21533446 - 21533371
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||| ||| |||||||| || ||||||||||||||  ||| |||||||||||||| ||||||||||| ||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgaca 21533371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 331
Target Start/End: Complemental strand, 21542159 - 21542085
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||| ||| ||||| ||||| |||| |||||||||  |||||||||||||||||| ||||||||||| ||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgaca 21542085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 31084447 - 31084382
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||| || ||||||||||  |||||||| ||||| ||||||||||||||||||| ||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 39268541 - 39268606
Alignment:
Q  259 tgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||| ||||||||||  |||||||||||||| |||||||||||| |||||| ||| |||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccga 39268606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 30098982 - 30099046
Alignment:
Q  260 gaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||| | ||||||||| ||| ||||||||||  ||||| ||||||||||||||||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccga 30099046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 39698671 - 39698596
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||  |||||||||||||   |||||||| || |||||| ||||||||||| ||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgaca 39698596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 331
Target Start/End: Complemental strand, 6401627 - 6401553
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||| ||||||||||| ||| |||||| |||  ||||| |||||||||||| |||||||| || ||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgaca 6401553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 21190998 - 21191064
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| ||||||||||  ||||||||||||||  | ||||||||||||| || |||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccga 21191064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 30502330 - 30502396
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| | ||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccga 30502396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 30542673 - 30542739
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| | ||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccga 30542739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 32630674 - 32630740
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||||| |||||||||   |||||| |||||  | ||||||||||||||||||||||||||    
T  32630674 cctatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacac 32630740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 28588613 - 28588682
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||||||||||||| |  ||||| ||||||||| ||||| || | ||||||| |||||||||||    
T  28588613 cctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccga 28588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 30098456 - 30098391
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||| ||||| ||||  ||||||| ||||||| ||||| |||||||||||| ||||||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 43565001 - 43564932
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| ||||||| ||  ||||||||||||||  | ||||||||| |||||| |||||||||||    
T  43565001 cctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccga 43564932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 21814391 - 21814316
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| | ||| ||||| ||| ||||||||||  ||| | |||||||||||| ||||||||||| ||||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgaca 21814316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 27932355 - 27932288
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    |||||||||||   ||||||||   |||||||||||||| ||||| |||||||||||| |||||||||    
T  27932355 cctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 43001922 - 43001859
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||| ||||||||||  ||||||||||||||  ||||  |||||||||||| ||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 14873642 - 14873588
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgt 309  Q
    ||||||||||| ||||||||||  ||||||||||||||  |||| ||||||||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt 14873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 26312875 - 26312817
Alignment:
Q  269 acactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatac 327  Q
    ||||||||  ||||||| ||||||| ||||| ||||||| |||| ||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatac 26312817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 11686069 - 11686000
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| ||||||||||  |||||| |||| | | || | ||||||||||||| |||||||||||    
T  11686069 cctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga 11686000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 15382592 - 15382536
Alignment:
Q  268 gacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||  ||||||||||||||  |||||||||| ||||||| ||| |||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccga 15382536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 17123166 - 17123099
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  ||||||||||||||  |||||||||| || |||| ||| |||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtcc-cgtgtcggacatgtttcgtgtccaacaccga 17123099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggaca 304  Q
    |||||||||| ||||||||||  ||||||||||||||  ||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 23015926 - 23015986
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccga 318  Q
    |||||||  ||||||||||  |||||||||||||| | |||||||||| |||||| |||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccga 23015986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 30183655 - 30183623
Alignment:
Q  280 attaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||||||||||| |||||||||||||||||||    
T  30183655 attaggcgtgtcccagtgtcggacacgtgtcgt 30183623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 26769641 - 26769573
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  |||||||||||||| ||||||||||||||||||| ||||| |||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccga 26769573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 28596587 - 28596520
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccga 28596520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 30717459 - 30717534
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||| |||||||||| ||| ||||||| ||||||||||| ||||||| ||| ||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgaca 30717534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 35056998 - 35056923
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| |||||||||| |||||||||||||    |||||||||||||||||| ||||||||||| ||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgaca 35056923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 24009414 - 24009346
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||| ||| ||||||||||  ||||| |||||||||||| |||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccga 24009346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 37419874 - 37419798
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| ||||||||||  ||||||||||||||  ||||||||||||  |||| ||||||||||| ||||||    
T  37419874 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgaca 37419798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 12224329 - 12224274
Alignment:
Q  269 acactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||| |||||||||||||| |||||||||||||| |||| |||||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccga 12224274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 2438661 - 2438727
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||| |||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccga 2438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 32749754 - 32749829
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||  ||||||||||||||| |||||||||| |||||||||||| ||||   ||||||| ||| ||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgaca 32749829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 11223793 - 11223858
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    |||||||||| |||||||||| |||||||||||||||  ||||| |||| ||||||| |||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 19942382 - 19942316
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||||||||||||  ||||||||||||||  ||||| ||||| || ||| |||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccga 19942316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 34993921 - 34993987
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||||| | |||||||||  ||||||||||||| |||||||||||| |||||| | ||||||    
T  34993921 cctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacac 34993987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 38117099 - 38117165
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    |||||||||| |||||| |||  ||||||||||||||  ||||||||||||||| || |||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacc 38117165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 42511322 - 42511387
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||| ||||||||||  |||||| |||||||  ||||||||||||||| || ||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 27084388 - 27084320
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||  |||||||||  |||||||||||||   |||| ||||||||||||| |||||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccga 27084320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 36096304 - 36096379
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| |||||||| || | | ||||||||||  ||||| |||||||||||| ||||||| ||| ||||||    
T  36096304 ctatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgaca 36096379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 15657992 - 15657930
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    |||||||||||||||||||  || |||||||||||  | |||||||||||||||  |||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgaca 15657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 15972994 - 15972924
Alignment:
Q  254 ccctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||||| ||||| || |  ||||||| ||||||  | |||||||||||||||| |||||||||||    
T  15972994 ccctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccga 15972924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 5040842 - 5040785
Alignment:
Q  267 ggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| || |||||||||||  | ||||||||| |||||| |||||||||||    
T  5040842 ggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccga 5040785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 19536360 - 19536397
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  19536360 cctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 20242666 - 20242735
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||||  ||||||| |  ||| ||||||||||| ||||| ||||||||| || |||||||||||    
T  20242666 cctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccga 20242735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 3414928 - 3414984
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||||| |||||  |||||||||||||||||  |||||| | |||||||||    
T  3414928 ctatgaagcatgaacacttattagattaggcgtgtcccggtgtcgtatacgtgtcgt 3414984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 21782744 - 21782800
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||| |||||||||  ||||||| |||||||  |||| |||||||||||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgt 21782800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 37559096 - 37559028
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||||||  ||||| |||||| |  ||||||||||||||||   |||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccga 37559028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 34450961 - 34451036
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||| ||| ||||||||||  ||||| |||||||||||| ||||||||||| ||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgaca 34451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 31557115 - 31557047
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||| |||||||||| |||| ||||||||||||||| |||||||||| ||||||| || ||||||||    
T  31557115 ctatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 22652106 - 22652031
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||  |||||| |||||||  ||||||||||| |||||| ||||||||||| ||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgaca 22652031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 29447040 - 29447107
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||| ||||||||||  ||||||||||||||| ||||| ||||| |||||| |||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccga 29447107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 18407839 - 18407777
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccg 317  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||| ||||||| ||||    
T  18407839 cctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccg 18407777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 36450694 - 36450760
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    ||||||||||  |||||||||  ||||||||||||||| |||||||||||| ||||| |||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacc 36450760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 5813712 - 5813643
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||| |||||| ||||||||||   |||||||||||||  |||||||||||||||||| |||||||||||    
T  5813712 cctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccga 5813643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 29510232 - 29510301
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| ||||||||||  ||||||| ||||||  |||||||||||| ||||| |||||||||||    
T  29510232 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccga 29510301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 327
Target Start/End: Original strand, 12570438 - 12570509
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatac 327  Q
    |||| ||||| ||||| || | |||||||||||||||| ||||||||||||||| || || |||||||||||    
T  12570438 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatac 12570509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 327
Target Start/End: Original strand, 12570664 - 12570735
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatac 327  Q
    |||| ||||| ||||| || | |||||||||||||||| ||||||||||||||| || || |||||||||||    
T  12570664 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatac 12570735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 21465542 - 21465467
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| |||||||||| | ||||||||| |||  |||| ||||||||||||| |||||||| || ||||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgaca 21465467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 26902104 - 26902179
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| |||||||||| |||| ||||||||||  ||| | |||||||||||| ||||||||  ||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgaca 26902179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 8343450 - 8343381
Alignment:
Q  252 tcccctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||||||||  ||||||| |  ||||||||||||||  |||||||||||||||||| || |||||    
T  8343450 tcccctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 3951476 - 3951544
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||| ||||||| |||||||||||| |  ||||| |||||||||||| || ||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccga 3951544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 3025668 - 3025605
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||| ||||||||||  |||||| ||||||  |||||| |||||||||||| ||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacac 3025605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 15816058 - 15816133
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||| ||  ||||||||||||||  ||||||||  |||||||| ||||||||| | ||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgaca 15816133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 29447574 - 29447499
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||  |||||| | |||||  ||||||||||| |||||| || |||||||| ||||||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgaca 29447499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 43737752 - 43737819
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||| ||||||||||| ||| |||||| |||  ||||| ||||| |||||| |||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccga 43737819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 11803389 - 11803323
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    |||||||||| ||||||||||  |||||| ||||| |  |||||||||| ||||||||||| |||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacacc 11803323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 15023199 - 15023261
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    ||||| |||||||||||||  |||||| ||||| | ||  |||||||||||||||||||||||    
T  15023199 atgaatcatggacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgaca 15023261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 22197670 - 22197736
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||| ||||| |||||||||| ||||||||||||  |  |||||||||||||||| | ||||||||    
T  22197670 cctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 6065586 - 6065650
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    |||||||||| |||||||||||  |||| |||||| |  |||||||||| ||||||| |||||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 14134818 - 14134762
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||||| || ||||||||||   |||||||||||||| ||| ||||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgt 14134762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 22943301 - 22943345
Alignment:
Q  268 gacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||  ||||||||||||||  ||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgt 22943345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 33405324 - 33405392
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||| |||| |||||||| || |||||| |||||||  ||||| |||| ||||||| |||||||||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccga 33405392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 34260390 - 34260426
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcc 292  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  34260390 ctatgaagcatagacactcattagattaggcgtgtcc 34260426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 44067644 - 44067596
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    |||||||| ||||||||||   |||||||||||||| ||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 44067596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 13523 - 13457
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| ||||||||||| ||||||| ||||||||||||| ||| |||||||| |||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccga 13457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 21804 - 21870
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| ||||||||||| ||||||| ||||||||||||| ||| |||||||| |||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccga 21870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 5409770 - 5409836
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||||| ||||||||||  ||||||||||||||  |||||||||||||||||| ||||||||    
T  5409770 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 9778625 - 9778559
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||| || ||||||||    
T  9778625 cctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 21880271 - 21880203
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||| ||  ||||||||||||||| |||||||||| ||||||| |||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccga 21880203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 24339772 - 24339697
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| || |||||||  ||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgaca 24339697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 25822785 - 25822710
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||| || |||||||||||||||||||| |||||   |||| |||||||||||| ||||| ||||||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgaca 25822710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 7438837 - 7438780
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||| ||| |||||||    
T  7438837 cctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgt 7438780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 598327 - 598259
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||||||| ||  ||||||||||||||  |||||||||||||||||| || ||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccga 598259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 29763129 - 29763185
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||| ||||||||||  |||||||||||||||  |||||||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgt 29763185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 1401143 - 1401073
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatac 327  Q
    |||||||||||||||||||||| |||||||| ||||||   |||||||||  |||||| || |||||||||||    
T  1401143 cctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatac 1401073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 1433578 - 1433513
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||| ||||||||||  |||||| |||||||| ||||||||||| |||| | ||||||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 7133212 - 7133281
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtc-gtatccgacaccga 324  Q
    |||||||||| |||| ||||| |||||||| |||||| ||||||||||||| ||| || |||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccga 7133281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 15680929 - 15680860
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||| ||||||||||   ||||| ||||||   |||||||||||||||||| |||||||||||    
T  15680929 cctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccga 15680860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 43027404 - 43027469
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||| |||||||| |  ||||||||||||||  |||||||||||||||||| || |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 5307375 - 5307331
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcg 300  Q
    |||||||||| | ||||||||| ||||||||||||||||||||||    
T  5307375 ctatgaagcacgtacactccttggattaggcgtgtcctagtgtcg 5307331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 32287404 - 32287471
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||| ||||||||||  ||||||| ||||||  ||||||||||| |||| | |||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccga 32287471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 32093954 - 32094020
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctag-tgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||| | ||||||||  ||||||||||||||  | ||||||||||||||||| ||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 15836439 - 15836488
Alignment:
Q  271 actccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    ||||||||||||||||||||||| ||| |||| | ||||||| |||||||    
T  15836439 actccttagattaggcgtgtcctggtgccggatatgtgtcgtgtccgaca 15836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 21138931 - 21138996
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    |||||||||| | ||||||| | ||||| ||||||||| ||||||||||||| || | ||||||||    
T  21138931 ctatgaagcacgaacactcccttgattaagcgtgtcctggtgtcggacacgtatcatgtccgacac 21138996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 305
Target Start/End: Complemental strand, 28155673 - 28155624
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacac 305  Q
    |||||||||| ||||| ||||| ||||||||||||||| ||||| |||||    
T  28155673 ctatgaagcacggacattccttggattaggcgtgtcctggtgtccgacac 28155624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 21864927 - 21864863
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgaca 320  Q
    ||||||||||  |||||||||   ||||| |||||||  |||||||||||||||||| |||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgaca 21864863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 27229244 - 27229296
Alignment:
Q  260 gaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||||| ||||   ||||||||||||||||||||| |||||| ||||    
T  27229244 gaagcatggacattcctcgaattaggcgtgtcctagtgtcgaacacgtatcgt 27229296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 35862071 - 35862027
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtc 299  Q
    ||||||||||| ||||||||||  ||||||||||||||| |||||    
T  35862071 cctatgaagcacggacactcctcggattaggcgtgtcctcgtgtc 35862027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 8721 - 8664
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    ||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||    
T  8721 cctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgt 8664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 8917 - 8849
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||||| ||| |||||| ||||||||||||||   |||||||||||||||||| |||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccga 8849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 241724 - 241649
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||| ||  ||||||||||||||  |||||||||||||||||| ||||||||| | ||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgaca 241649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 14646 - 14580
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    |||||||||| | ||||||||| |||||||||||||   |||||||||||||||||| |||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 71856 - 71780
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||||  |||||||||  |||||| |||||||  ||||||||||||||| || ||||||||||| ||||||    
T  71856 cctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgaca 71780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 403 - 470
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||| ||||||||||  ||||||| ||||||  |||||||||||| ||||| |||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccga 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 8564 - 8639
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||| ||||||||||   ||||||||||| | |||||||||||||| |||| ||||| ||||| ||||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgaca 8639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 5926 - 6000
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||| ||| ||||||||||| ||| |||||||||   ||||| |||||||||||| | ||||||||||||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgaca 6000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 3776 - 3853
Alignment:
Q  254 ccctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||||||||| ||||||||||  |||||||||||||    ||||||||| ||||||| ||||||||| | ||||||    
T  3776 ccctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgaca 3853  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 70374 - 70329
Alignment:
Q  279 gattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||    
T  70374 gattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccga 70329  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 92940 - 92875
Alignment:
Q  257 tatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacacc 322  Q
    ||||||||| ||||||||||  ||||||||||||||  ||||| |||| ||||||| |||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

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Target: scaffold0793 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 4821 - 4877
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgt 312  Q
    |||||||||| ||||||||||  ||||||||||||||  |||||||||| |||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgt 4877  T

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Target: scaffold0512 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 4976 - 5044
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||  |||||||||  |||||||| ||||  | ||||||||||||||||| |||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccga 5044  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 17840 - 17884
Alignment:
Q  287 gtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||    
T  17840 gtgtcccagtgtcggacacgtgtcgtgtccaacaccgatacgaca 17884  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 24156 - 24079
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcgg--acacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||||||||| |||||||| |  |||||||||||||| ||||||||  |||||||| || ||||||||||| ||||||    
T  24156 cctatgaagcacggacactcatcggattaggcgtgtcc-agtgtcggacacacgtgttgtgtccgacaccgacacgaca 24079  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 1733 - 1695
Alignment:
Q  286 cgtgtcctagtgtcggacacgtgtcgtatccgacaccga 324  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccga 1695  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 3428 - 3362
Alignment:
Q  255 cctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacac 321  Q
    ||||||||||| ||||||||||  |||||||||||||| ||||||   |||||||| | ||||||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacac 3362  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 135263 - 135313
Alignment:
Q  256 ctatgaagcatggacactccttagattaggcgtgtcctagtgtcggacacg 306  Q
    |||||||||| | |||| ||| |||||||||||||||| ||||||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 263303 - 263376
Alignment:
Q  258 atgaagcatggacactccttagattaggcgtgtcctagtgtcggacacgtgtcgtatccgacaccgatacgaca 331  Q
    ||||| || ||||||||||  ||||||||||||| | || ||| ||||||||||| || |||||||| ||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgaca 263376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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