View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0616_high_10 (Length: 453)
Name: NF0616_high_10
Description: NF0616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0616_high_10 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 32 - 375
Target Start/End: Complemental strand, 12931052 - 12930707
Alignment:
| Q |
32 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnn |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
12931052 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataa |
12930953 |
T |
|
| Q |
132 |
nnn--tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatatta |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930952 |
aaaaatgaacaccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatatta |
12930853 |
T |
|
| Q |
230 |
caatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaa |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
12930852 |
caatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaa |
12930753 |
T |
|
| Q |
330 |
gttatagagatgatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930752 |
gttatagagatgatacccacccggtgtatttttcccacactctctg |
12930707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 44 - 375
Target Start/End: Complemental strand, 12935786 - 12935453
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacac |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||| ||||||| |
|
|
| T |
12935786 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaattcaaaagaaactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
12935687 |
T |
|
| Q |
142 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935686 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
12935587 |
T |
|
| Q |
242 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12935586 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttactctaatgctattattttatagcacctagaagttatagagatg |
12935487 |
T |
|
| Q |
342 |
atacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
12935486 |
atacccacccggtgtatttttcccacactctctg |
12935453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 249
Target Start/End: Original strand, 26504945 - 26505055
Alignment:
| Q |
137 |
aacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatatt |
236 |
Q |
| |
|
|||| |||||||||||||| || ||| ||||||| ||| ||| ||||| | ||||||||| |||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
26504945 |
aacatcaatatttaacgtg-aataccgtctaataacaaggcaaa-accacagtacaaactccaaaaaatattcaactataataaaaaatattacaatatt |
26505042 |
T |
|
| Q |
237 |
ctctccactctct |
249 |
Q |
| |
|
|| || ||||||| |
|
|
| T |
26505043 |
ctttcaactctct |
26505055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 15589060 - 15588948
Alignment:
| Q |
135 |
tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaata |
234 |
Q |
| |
|
|||||| ||||||||| || ||||||||||| || |||| |||| | || | ||||||||| ||||||||| |||| ||| ||| |||||||||| | |
|
|
| T |
15589060 |
tgaacatcaatatttattttgaaaaaccctctattaatgagagaaaaatcaagtgacaaactctaaaaaatatttcactttatcaaacaatattacaaca |
15588961 |
T |
|
| Q |
235 |
ttctctccactct |
247 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
15588960 |
ttttctccactct |
15588948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 26504850 - 26504895
Alignment:
| Q |
52 |
tcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa |
97 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
26504850 |
tcgacgagtttaatggaagtgtaaattaaaatttcaaaatccaaaa |
26504895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 285; Significance: 1e-159; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 32 - 375
Target Start/End: Complemental strand, 14174314 - 14173968
Alignment:
| Q |
32 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnn |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
14174314 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagtgataa |
14174215 |
T |
|
| Q |
132 |
nnn---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatatt |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174214 |
aaaaaatgaacaccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatatt |
14174115 |
T |
|
| Q |
229 |
acaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctaga |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14174114 |
acaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctaga |
14174015 |
T |
|
| Q |
329 |
agttatagagatgatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174014 |
agttatagagatgatacccacccggtgtatttttcccacactctctg |
14173968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 32 - 375
Target Start/End: Original strand, 28611556 - 28611902
Alignment:
| Q |
32 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnn |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
28611556 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataa |
28611655 |
T |
|
| Q |
132 |
nnn---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatatt |
228 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611656 |
aaaaaatgaacaccaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatatt |
28611755 |
T |
|
| Q |
229 |
acaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctaga |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28611756 |
acaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctaga |
28611855 |
T |
|
| Q |
329 |
agttatagagatgatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611856 |
agttatagagatgatacccacccggtgtatttttcccacactctctg |
28611902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 43 - 375
Target Start/End: Complemental strand, 14179057 - 14178722
Alignment:
| Q |
43 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
14179057 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcaataaaaaaaatgaac |
14178958 |
T |
|
| Q |
140 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178957 |
accaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
14178858 |
T |
|
| Q |
240 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
339 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14178857 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
14178758 |
T |
|
| Q |
340 |
tgatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178757 |
tgatacccacccggtgtatttttcccacactctctg |
14178722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 43 - 375
Target Start/End: Original strand, 28606805 - 28607140
Alignment:
| Q |
43 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||| |
|
|
| T |
28606805 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaattaac |
28606904 |
T |
|
| Q |
140 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
239 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606905 |
accaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
28607004 |
T |
|
| Q |
240 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
339 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28607005 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
28607104 |
T |
|
| Q |
340 |
tgatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607105 |
tgatacccacccggtgtatttttcccacactctctg |
28607140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 44 - 375
Target Start/End: Complemental strand, 44161949 - 44161617
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaaca |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
44161949 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
44161850 |
T |
|
| Q |
141 |
ccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
44161849 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaat--tctct |
44161752 |
T |
|
| Q |
241 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
340 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
44161751 |
ccactctcttacacacacaagagatacaatatagtgtttcccgtaagacctacttctattctaatgctattattttatagcacctagaagttatagagat |
44161652 |
T |
|
| Q |
341 |
gatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161651 |
gatacccacccggtgtatttttcccacactctctg |
44161617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 44 - 375
Target Start/End: Complemental strand, 11104829 - 11104500
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
143 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
11104829 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagctgtagcgataaaaatgaacacca |
11104730 |
T |
|
| Q |
144 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
243 |
Q |
| |
|
||||||||| | ||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
11104729 |
atatttaacatagaaaatcctctaatatcgagggtaa-accacgggacaaactccgaaaaatattccaccatatctaagaatattacaatattctctcca |
11104631 |
T |
|
| Q |
244 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
343 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
11104630 |
ctctcttacacaca-aagagatacaatatagtgtttcccgtgagacccactcctattcaaatgctattattttataacacctagaagttatagagatgat |
11104532 |
T |
|
| Q |
344 |
acccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
| ||||||||||||||||||| |||||||||| |
|
|
| T |
11104531 |
atccacccggtgtatttttcctacactctctg |
11104500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 43 - 344
Target Start/End: Original strand, 48826701 - 48827000
Alignment:
| Q |
43 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnnt-gaacac |
141 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| |||||||||| |||||| |
|
|
| T |
48826701 |
ttgttgggatcgacgagcttaacgcaattgtaaattaaaatttcaaaattcaa--gagattggatcttgcagcgcagcggtagcgatagaaaaagaacac |
48826798 |
T |
|
| Q |
142 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
241 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48826799 |
caatatttaacgtggaaaatcctctaataccgagggaaaaatcacgggacaa-ctccgaaaaatattccactatattaaagaatattacaatattctctt |
48826897 |
T |
|
| Q |
242 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
341 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
48826898 |
cgctctcttacacacacaagagatacaatatagtgtttcccgtgagattcactcctatttgaatgctattattttatagcacctagaagttatagagatg |
48826997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 241
Target Start/End: Original strand, 48708086 - 48708256
Alignment:
| Q |
71 |
tgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaatatttaacgtggaaaaccctctaata |
170 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||| || | ||| ||| || | || ||||||||||||| || ||||| || ||||| |
|
|
| T |
48708086 |
tgtaaattaaaattccaaaatataaaagaaattgaatcttacaacgcagtggtggcgataaaattaaataccaatatttaacatgaaaaactctataata |
48708185 |
T |
|
| Q |
171 |
ctgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
241 |
Q |
| |
|
|| || |||| |||||| |||||||||| ||||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
48708186 |
ctaagagaaaaaccacgtgacaaactccaaaaaatatttcattatattaaaaaatattacaatattctctc |
48708256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 313
Target Start/End: Original strand, 24726288 - 24726442
Alignment:
| Q |
156 |
gaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctcacaca |
255 |
Q |
| |
|
||||||| ||||||| ||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || | ||||||||||||| ||||| || | |
|
|
| T |
24726288 |
gaaaaccatctaatatcaagggaaaagccacgagacaaactctgaaaaatattccattatattaaagaacataataatattctctccattctcttaccga |
24726387 |
T |
|
| Q |
256 |
cacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattat |
313 |
Q |
| |
|
||| |||||||| |||| ||||| |||||||||| ||| |||||| |||| |||||| |
|
|
| T |
24726388 |
cac--gagatacactatattgttttccgtgagacc-actcctattcaaatgttattat |
24726442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 275; Significance: 1e-153; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 44 - 375
Target Start/End: Complemental strand, 34907503 - 34907170
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacac |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |
|
|
| T |
34907503 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
34907404 |
T |
|
| Q |
142 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907403 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
34907304 |
T |
|
| Q |
242 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
34907303 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttatagagatg |
34907204 |
T |
|
| Q |
342 |
atacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
34907203 |
atacccacccggtgtatttttcccacactctctg |
34907170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 44 - 375
Target Start/End: Original strand, 37040426 - 37040760
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaaca |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
37040426 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaaagactggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
37040525 |
T |
|
| Q |
141 |
ccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37040526 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattttct |
37040625 |
T |
|
| Q |
241 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
340 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37040626 |
ccactctctcacacacacaagagatacaatatagtgttttccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagat |
37040725 |
T |
|
| Q |
341 |
gatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
37040726 |
gatacccacccgatgtatttttcccacactctctg |
37040760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 32 - 364
Target Start/End: Complemental strand, 15290606 - 15290273
Alignment:
| Q |
32 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa-gagattggatcttgcagcacagcggtagcnnnn |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||| |||| |
|
|
| T |
15290606 |
tctgataccacttgttgggctcgacgagcttaacgcaattgtaaattaaaatttcaaaatccaaaaagagattggatcttgcagcgcagccttagcgata |
15290507 |
T |
|
| Q |
131 |
nnnn---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatat |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||||| ||| || |||||||||||| |||||||| |
|
|
| T |
15290506 |
aaaaaaatgaacaccaatatttaacgtggaaaaccctctaataccgaggtataaaccacgggacaaactccaaaagattttccactatatttaagaatat |
15290407 |
T |
|
| Q |
228 |
tacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctag |
327 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||| |||| ||||||||| |
|
|
| T |
15290406 |
tacaatattctctccactctcttacacacacaagagatacaatatagtgttt-ccgtgagacccactcctattcgaatgctat--tatttcagcacctag |
15290310 |
T |
|
| Q |
328 |
aagttatagagatgatacccacccggtgtatttttcc |
364 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15290309 |
aagttatagagatgatacccacccggtgtatttttcc |
15290273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 44 - 345
Target Start/End: Complemental strand, 12099361 - 12099060
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
143 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || || |||| |||| | || |
|
|
| T |
12099361 |
tgttgggctcgacgagtttaacgcgagtgtaaattaaaattccaaaatccaaaagagatatgatcttgcagctcaccgatagcgataaaaatgaaaagca |
12099262 |
T |
|
| Q |
144 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
243 |
Q |
| |
|
|||||| ||||| ||||||||||||| || ||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12099261 |
atattttacgtgaaaaaccctctaatgacgaaggaaaaaccaagggacaaactccgaaaaaatttcaactatattaaagaatattacaatattctctcca |
12099162 |
T |
|
| Q |
244 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
343 |
Q |
| |
|
|||||| |||| ||||||||| ||||||| ||||||| ||||||| ||| |||||| |||| |||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
12099161 |
ctctcttacacgcacaagagacacaatattgtgtttctagtgagactcactcctattcaaatgatattattttataacacctaaaagttatagagatgat |
12099062 |
T |
|
| Q |
344 |
ac |
345 |
Q |
| |
|
|| |
|
|
| T |
12099061 |
ac |
12099060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 192 - 365
Target Start/End: Complemental strand, 12082227 - 12082055
Alignment:
| Q |
192 |
aaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacct |
291 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||| |||||| |
|
|
| T |
12082227 |
aaactccaaaaaatattccactatattaa-gaatattacaatattttctccactctcttacacggaaaagagatacaatatagtgtttctaatgagactc |
12082129 |
T |
|
| Q |
292 |
acttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtatttttccc |
365 |
Q |
| |
|
|| |||||| |||| |||||| ||||||| |||||||||||||||||| ||||| ||||| | |||||||||| |
|
|
| T |
12082128 |
gctcctattcaaatgttattattttatagcgcctagaagttatagagataatacctacccgatatatttttccc |
12082055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 2757370 - 2757448
Alignment:
| Q |
201 |
aaaatattccactatattaaagaatattacaatattctctccactctctcacacacacaagagatacaatatagtgttt |
279 |
Q |
| |
|
|||||||||||||||||| || |||||| || ||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
2757370 |
aaaatattccactatatttaaaaatattgcactattctctccactctctttcacactcaagagatacaatatagtgttt |
2757448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 12084751 - 12084669
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
126 |
Q |
| |
|
|||||||||| ||||||||||| | || ||||||||||||| |||||||||| ||| ||||||||||| ||| || ||||||| |
|
|
| T |
12084751 |
tgttgggctcaacgagcttaacacgagggtaaattaaaatttcaaaatccaatagacattggatcttgtagcgcaacggtagc |
12084669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 2757209 - 2757273
Alignment:
| Q |
40 |
cacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattg |
104 |
Q |
| |
|
||||||||| | || ||||||||| ||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
2757209 |
cacttgttgtgttcaacgagcttattacaagtgtaaattaaaattccaaaattcaaaagaaattg |
2757273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 44 - 375
Target Start/End: Original strand, 29106878 - 29107209
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
143 |
Q |
| |
|
||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
29106878 |
tgttgggatcgaggagcttaatgcaagtgtaaattaaaattccaaaatccaaaaaagattggatcttgcagcgcagcggtagcgttaaaaatgaacacca |
29106977 |
T |
|
| Q |
144 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
243 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29106978 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
29107077 |
T |
|
| Q |
244 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
343 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
29107078 |
ctctcttacacacacaagagatacaa-atagtgtttcccgtgagacctacttctattctaatgctattattttttagcacctagaagttataaagatgat |
29107176 |
T |
|
| Q |
344 |
a-cccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
| ||||||| |||||||||||||||||||||| |
|
|
| T |
29107177 |
accccacccaatgtatttttcccacactctctg |
29107209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 43 - 375
Target Start/End: Original strand, 42910992 - 42911323
Alignment:
| Q |
43 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacc |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| | | |||||||| |
|
|
| T |
42910992 |
ttgttgggctcgacgagcttaacgcaagtggaaattaaaattttaaaatccaaaagagattagatcttgcagcgcagcggcaacgataaaaatgaacacc |
42911091 |
T |
|
| Q |
143 |
aatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcc |
242 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42911092 |
aatatttaacatggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaa-tattccactatatttaagaatattacaatattctctcc |
42911190 |
T |
|
| Q |
243 |
actctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatga |
342 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
42911191 |
actctctcacacacacaaaagatacaatatagtgtttcccttgagacctacttctattctaatgctattattttatagcaccaagaagttatagagatga |
42911290 |
T |
|
| Q |
343 |
tacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
||||||||| |||||||||| |||||||||||| |
|
|
| T |
42911291 |
tacccacccagtgtattttttccacactctctg |
42911323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 38994687 - 38994779
Alignment:
| Q |
32 |
tctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggta |
124 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||| ||||| | |||||||||||||| |||||||| |
|
|
| T |
38994687 |
tctgataccacttgttgggcttgacgatcttaatgctagtgtaaattaaaattccaaaacccaaacaaaattggatcttgcagtgcagcggta |
38994779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 38997230 - 38997320
Alignment:
| Q |
136 |
gaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
226 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||| || |||| || |||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
38997230 |
gaacagcaatattttacgtcgaaaaccctctaatatcgaacgaaaaactacgggacaaactccaaaaaataatccattatattaaagaata |
38997320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 38997130 - 38997193
Alignment:
| Q |
36 |
ataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaga |
99 |
Q |
| |
|
|||| |||||||||| |||| | |||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
38997130 |
atactacttgttgggttcgaagggcttaatgcgggtgtaaattaaaattccagaatccaaaaga |
38997193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 43 - 375
Target Start/End: Complemental strand, 8539549 - 8539214
Alignment:
| Q |
43 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn-tgaacac |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||| | |||||| |
|
|
| T |
8539549 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaattctaaaagagattggatcttgcagcgcagcggtaacaataaaaaatgaacat |
8539450 |
T |
|
| Q |
142 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
8539449 |
caatatttaacgtggaaaaccctctaataccgagggaaaaatcacgggacaaactccgaaagatattccactatatttaagaatattacaatattatctc |
8539350 |
T |
|
| Q |
242 |
cactctctcacacacacaagagatacaa---tatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagag |
338 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||| |||||||||| ||| |||||| | ||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
8539349 |
cactctcttacacacacaagagatacaatattatagtgttt-ccgtgagacccactcctattcgattgctattattttacagcacctaaaagttatagag |
8539251 |
T |
|
| Q |
339 |
atgatacccacccggtgtatttttcccacactctctg |
375 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
8539250 |
atgatacccatccgatgtatttttcccacactctctg |
8539214 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 9e-37; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 51302306 - 51302192
Alignment:
| Q |
261 |
gagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtattt |
360 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
51302306 |
gagatacaatatagtgtttcccgtgagacccactcctattcgaatgcaattgttttatagcacctagaagttatagagatgattcccacccggtgtattt |
51302207 |
T |
|
| Q |
361 |
ttcccacactctctg |
375 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
51302206 |
tatccacactctctg |
51302192 |
T |
|
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Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 51303028 - 51302937
Alignment:
| Q |
35 |
gataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
126 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
51303028 |
gataccacttgttgggatcgacgagcttaatgcaagtgtaaattaaaatttcaaaatccaaaacagattggatcttgcagcgcagcggtagc |
51302937 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 51302344 - 51302308
Alignment:
| Q |
135 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
171 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302344 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
51302308 |
T |
|
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Target: chr6 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 44 - 226
Target Start/End: Original strand, 2100199 - 2100379
Alignment:
| Q |
44 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattgga-tcttgcagcacagcggtagcnnnnnnnntgaacacc |
142 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| || | |||||||||| || || |||||| | |
|
|
| T |
2100199 |
tgttgggctcgacgagcttaacacaagtgtaaattaaaattccaaaattcataagagatttgaattttgcagcacaacgataatgataaaattgaacatc |
2100298 |
T |
|
| Q |
143 |
aatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
226 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||| |||| || ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2100299 |
aatatttaaggtggaaaaccctttaataatgagcgaaaaac---ggggcaaactccgaaaaatattccactatattaaagaata |
2100379 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 2100723 - 2100771
Alignment:
| Q |
219 |
aaagaatattacaatattctctccactctctcacacacacaagagatac |
267 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
2100723 |
aaagaatattacaatattctctccactctcttacatacacaagagatac |
2100771 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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