View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0616_low_13 (Length: 462)

Name: NF0616_low_13
Description: NF0616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0616_low_13
NF0616_low_13
[»] chr5 (39 HSPs)
chr5 (11-434)||(7918463-7918881)
chr5 (11-90)||(34984809-34984888)
chr5 (11-90)||(25627060-25627139)
chr5 (11-90)||(14285164-14285243)
chr5 (11-90)||(3252283-3252362)
chr5 (15-90)||(30883196-30883271)
chr5 (12-90)||(21549132-21549210)
chr5 (17-90)||(87423-87496)
chr5 (22-86)||(892479-892543)
chr5 (11-90)||(16773810-16773889)
chr5 (11-90)||(18595995-18596074)
chr5 (11-90)||(29075784-29075863)
chr5 (12-98)||(17028259-17028345)
chr5 (12-90)||(26078046-26078124)
chr5 (18-89)||(16436622-16436692)
chr5 (15-90)||(16457813-16457888)
chr5 (11-90)||(21589291-21589370)
chr5 (11-90)||(22737085-22737164)
chr5 (11-82)||(43442207-43442278)
chr5 (12-90)||(16638818-16638896)
chr5 (18-86)||(5390853-5390919)
chr5 (12-69)||(25979194-25979251)
chr5 (17-90)||(30109308-30109381)
chr5 (12-90)||(6844732-6844810)
chr5 (9-86)||(17155831-17155906)
chr5 (12-90)||(19043461-19043539)
chr5 (12-86)||(41730549-41730623)
chr5 (12-93)||(18437085-18437166)
chr5 (11-80)||(37258360-37258429)
chr5 (13-93)||(14804666-14804746)
chr5 (15-90)||(16172982-16173056)
chr5 (11-78)||(27596342-27596409)
chr5 (15-90)||(31669023-31669097)
chr5 (13-64)||(39327086-39327137)
chr5 (15-57)||(3315251-3315293)
chr5 (11-93)||(12877693-12877775)
chr5 (13-87)||(22020858-22020932)
chr5 (13-86)||(29692382-29692455)
chr5 (11-90)||(30700612-30700689)
[»] chr8 (50 HSPs)
chr8 (287-434)||(31237809-31237956)
chr8 (94-230)||(31238008-31238139)
chr8 (11-90)||(18540301-18540380)
chr8 (13-90)||(3624583-3624660)
chr8 (15-90)||(16852343-16852418)
chr8 (15-90)||(19703485-19703560)
chr8 (17-90)||(11518877-11518950)
chr8 (15-90)||(2203495-2203570)
chr8 (11-90)||(8794339-8794418)
chr8 (11-90)||(12988431-12988510)
chr8 (11-90)||(33017217-33017296)
chr8 (13-90)||(968365-968442)
chr8 (11-93)||(35690058-35690140)
chr8 (12-90)||(44780109-44780187)
chr8 (29-90)||(5264547-5264608)
chr8 (11-90)||(13129671-13129750)
chr8 (15-90)||(28783063-28783138)
chr8 (12-86)||(11819783-11819857)
chr8 (17-90)||(29858049-29858122)
chr8 (11-75)||(6536538-6536602)
chr8 (11-90)||(20994451-20994531)
chr8 (22-90)||(26688868-26688936)
chr8 (11-90)||(23361643-23361722)
chr8 (12-95)||(27750728-27750811)
chr8 (15-90)||(28750574-28750648)
chr8 (16-90)||(11793520-11793594)
chr8 (16-90)||(18897169-18897243)
chr8 (21-95)||(23874386-23874460)
chr8 (12-90)||(30483879-30483957)
chr8 (13-73)||(22193360-22193420)
chr8 (14-90)||(29431014-29431090)
chr8 (11-90)||(6436549-6436628)
chr8 (15-90)||(6530810-6530884)
chr8 (14-91)||(11492070-11492147)
chr8 (15-67)||(3524399-3524451)
chr8 (14-90)||(3826774-3826850)
chr8 (14-90)||(6569768-6569844)
chr8 (15-94)||(18546360-18546439)
chr8 (12-86)||(33727868-33727942)
chr8 (16-90)||(36042984-36043058)
chr8 (15-93)||(36205195-36205273)
chr8 (12-82)||(43594313-43594383)
chr8 (13-90)||(8485002-8485079)
chr8 (12-81)||(20225396-20225465)
chr8 (22-95)||(25389455-25389527)
chr8 (13-90)||(35641897-35641974)
chr8 (14-86)||(3058046-3058118)
chr8 (13-73)||(15948045-15948105)
chr8 (14-90)||(28566108-28566183)
chr8 (14-90)||(28573731-28573806)
[»] chr1 (59 HSPs)
chr1 (11-90)||(36371473-36371552)
chr1 (11-90)||(33700767-33700846)
chr1 (11-90)||(4566551-4566630)
chr1 (11-95)||(9165189-9165273)
chr1 (11-89)||(1247117-1247195)
chr1 (14-90)||(15786317-15786393)
chr1 (11-82)||(8177176-8177247)
chr1 (11-90)||(31794258-31794337)
chr1 (11-86)||(51703786-51703861)
chr1 (11-89)||(17745250-17745328)
chr1 (11-88)||(21547474-21547551)
chr1 (11-95)||(10526821-10526905)
chr1 (11-90)||(2799865-2799944)
chr1 (15-90)||(19528325-19528400)
chr1 (12-86)||(6122801-6122875)
chr1 (12-86)||(11063563-11063637)
chr1 (11-83)||(6650605-6650677)
chr1 (11-90)||(8904417-8904496)
chr1 (15-90)||(16169976-16170051)
chr1 (11-90)||(21267987-21268066)
chr1 (15-86)||(52116779-52116850)
chr1 (11-82)||(52336768-52336839)
chr1 (11-69)||(3265948-3266006)
chr1 (11-89)||(19088213-19088291)
chr1 (16-90)||(40257402-40257476)
chr1 (13-87)||(48400178-48400251)
chr1 (13-90)||(50901584-50901662)
chr1 (13-90)||(2219975-2220052)
chr1 (13-90)||(51814497-51814574)
chr1 (13-90)||(18459227-18459305)
chr1 (11-86)||(35699959-35700036)
chr1 (12-90)||(44126398-44126476)
chr1 (13-90)||(16893397-16893474)
chr1 (30-91)||(24730386-24730447)
chr1 (17-90)||(39012294-39012366)
chr1 (29-90)||(41508834-41508895)
chr1 (15-91)||(17410233-17410309)
chr1 (16-90)||(21694449-21694520)
chr1 (15-90)||(952514-952589)
chr1 (15-90)||(15581140-15581214)
chr1 (15-90)||(25297775-25297850)
chr1 (14-73)||(31383795-31383854)
chr1 (12-83)||(42787218-42787289)
chr1 (15-89)||(4824975-4825049)
chr1 (47-93)||(26232416-26232462)
chr1 (47-93)||(35187919-35187965)
chr1 (31-93)||(35692073-35692135)
chr1 (18-95)||(7743326-7743403)
chr1 (12-89)||(14787331-14787408)
chr1 (13-90)||(19940868-19940945)
chr1 (15-44)||(24019072-24019101)
chr1 (15-88)||(36428717-36428790)
chr1 (17-90)||(37046988-37047060)
chr1 (29-90)||(44486170-44486230)
chr1 (11-90)||(15904613-15904693)
chr1 (16-88)||(37400279-37400351)
chr1 (15-87)||(43445969-43446041)
chr1 (31-75)||(44046162-44046206)
chr1 (11-75)||(50919972-50920036)
[»] chr7 (66 HSPs)
chr7 (11-90)||(26459404-26459483)
chr7 (12-95)||(39631842-39631925)
chr7 (12-90)||(43215187-43215265)
chr7 (14-90)||(30442491-30442567)
chr7 (12-90)||(23552121-23552199)
chr7 (11-95)||(17113793-17113877)
chr7 (15-87)||(19553460-19553531)
chr7 (11-94)||(4566422-4566505)
chr7 (15-90)||(22760866-22760941)
chr7 (11-90)||(30579338-30579417)
chr7 (11-93)||(7721369-7721451)
chr7 (13-90)||(17041008-17041085)
chr7 (29-90)||(25021347-25021408)
chr7 (11-76)||(33222387-33222452)
chr7 (11-83)||(2962469-2962541)
chr7 (11-95)||(33869439-33869523)
chr7 (12-95)||(18363694-18363777)
chr7 (15-90)||(20335829-20335904)
chr7 (15-86)||(25956291-25956361)
chr7 (15-90)||(38374597-38374672)
chr7 (32-95)||(42836016-42836079)
chr7 (15-86)||(43590914-43590985)
chr7 (22-93)||(45976928-45976999)
chr7 (13-87)||(14058259-14058333)
chr7 (13-87)||(14368287-14368361)
chr7 (15-89)||(42711962-42712036)
chr7 (13-90)||(5273586-5273663)
chr7 (11-88)||(41519258-41519335)
chr7 (15-91)||(15905672-15905747)
chr7 (16-90)||(41487365-41487436)
chr7 (18-97)||(24513793-24513872)
chr7 (47-90)||(45559203-45559246)
chr7 (20-90)||(7801183-7801253)
chr7 (16-90)||(39499718-39499792)
chr7 (13-86)||(45709704-45709777)
chr7 (12-76)||(9608624-9608688)
chr7 (12-76)||(9836196-9836260)
chr7 (15-87)||(21877814-21877886)
chr7 (18-90)||(31835195-31835267)
chr7 (18-90)||(48771941-48772013)
chr7 (23-90)||(5579240-5579307)
chr7 (11-90)||(7744106-7744185)
chr7 (11-90)||(15137556-15137635)
chr7 (15-90)||(26199512-26199587)
chr7 (12-86)||(5830598-5830672)
chr7 (19-93)||(36803629-36803703)
chr7 (13-90)||(2446311-2446388)
chr7 (15-88)||(7499922-7499995)
chr7 (15-88)||(11720958-11721031)
chr7 (11-52)||(13106776-13106817)
chr7 (11-79)||(11700179-11700247)
chr7 (13-93)||(20952145-20952225)
chr7 (11-87)||(21558134-21558210)
chr7 (14-90)||(23301599-23301675)
chr7 (14-90)||(29385740-29385816)
chr7 (11-90)||(25655222-25655301)
chr7 (29-72)||(28236593-28236636)
chr7 (12-86)||(33181205-33181279)
chr7 (16-90)||(35328874-35328947)
chr7 (29-90)||(3280497-3280558)
chr7 (29-90)||(21854551-21854612)
chr7 (13-90)||(22932707-22932784)
chr7 (12-81)||(44309908-44309977)
chr7 (18-90)||(25590614-25590686)
chr7 (14-86)||(35119390-35119462)
chr7 (13-93)||(43663091-43663171)
[»] chr4 (60 HSPs)
chr4 (11-90)||(37109345-37109424)
chr4 (12-90)||(7292793-7292871)
chr4 (11-90)||(37274453-37274533)
chr4 (11-90)||(7949448-7949527)
chr4 (11-90)||(19680782-19680861)
chr4 (13-84)||(2185028-2185099)
chr4 (13-91)||(49576890-49576968)
chr4 (11-90)||(15180744-15180820)
chr4 (11-95)||(46545709-46545793)
chr4 (11-98)||(1730483-1730570)
chr4 (15-90)||(19238575-19238650)
chr4 (12-75)||(23377974-23378037)
chr4 (11-90)||(31759652-31759731)
chr4 (15-90)||(37720212-37720287)
chr4 (11-78)||(38869783-38869850)
chr4 (15-90)||(55427198-55427273)
chr4 (11-90)||(2622389-2622472)
chr4 (11-75)||(16581711-16581775)
chr4 (11-95)||(28635694-28635778)
chr4 (12-90)||(8030199-8030277)
chr4 (14-88)||(32475092-32475165)
chr4 (17-90)||(51250522-51250595)
chr4 (34-90)||(41683752-41683808)
chr4 (11-90)||(4249180-4249259)
chr4 (15-90)||(8325377-8325452)
chr4 (20-95)||(9241028-9241103)
chr4 (47-90)||(27965540-27965583)
chr4 (39-90)||(37443705-37443756)
chr4 (15-94)||(37980146-37980224)
chr4 (15-90)||(39509073-39509148)
chr4 (11-73)||(11592147-11592209)
chr4 (12-90)||(29195098-29195175)
chr4 (17-95)||(31826607-31826685)
chr4 (52-90)||(33438513-33438551)
chr4 (12-93)||(13265103-13265184)
chr4 (21-90)||(24827828-24827897)
chr4 (13-89)||(24234649-24234725)
chr4 (11-83)||(27372651-27372723)
chr4 (15-95)||(47044715-47044795)
chr4 (15-90)||(5795407-5795482)
chr4 (13-76)||(13015444-13015507)
chr4 (13-44)||(38838846-38838877)
chr4 (15-90)||(44865337-44865412)
chr4 (15-90)||(46295100-46295175)
chr4 (15-90)||(56409954-56410028)
chr4 (16-93)||(5450090-5450170)
chr4 (12-90)||(12798687-12798765)
chr4 (47-89)||(13901746-13901788)
chr4 (16-90)||(40283985-40284059)
chr4 (29-67)||(47202435-47202473)
chr4 (15-88)||(9936959-9937032)
chr4 (11-76)||(10047997-10048062)
chr4 (37-86)||(29312272-29312321)
chr4 (15-76)||(30938217-30938278)
chr4 (14-95)||(33619204-33619285)
chr4 (11-72)||(33632130-33632191)
chr4 (16-65)||(46329192-46329241)
chr4 (12-88)||(4923555-4923631)
chr4 (15-67)||(32992638-32992690)
chr4 (11-71)||(53496899-53496959)
[»] chr2 (50 HSPs)
chr2 (14-90)||(42327392-42327468)
chr2 (11-90)||(42922417-42922497)
chr2 (13-90)||(42602557-42602634)
chr2 (11-90)||(16918572-16918651)
chr2 (15-90)||(29503274-29503349)
chr2 (11-90)||(40416384-40416463)
chr2 (12-95)||(11062358-11062441)
chr2 (15-90)||(37480078-37480153)
chr2 (11-90)||(1729819-1729898)
chr2 (11-90)||(4060208-4060287)
chr2 (12-86)||(21195671-21195745)
chr2 (11-90)||(11251090-11251169)
chr2 (11-90)||(19244112-19244191)
chr2 (15-90)||(23052521-23052596)
chr2 (15-90)||(39714995-39715070)
chr2 (11-90)||(34041582-34041661)
chr2 (12-90)||(19322771-19322849)
chr2 (13-90)||(7799031-7799108)
chr2 (17-82)||(12086129-12086194)
chr2 (13-90)||(29996456-29996533)
chr2 (13-69)||(4262298-4262354)
chr2 (31-95)||(16381668-16381732)
chr2 (11-90)||(9318069-9318147)
chr2 (11-90)||(14500280-14500359)
chr2 (11-97)||(4438973-4439059)
chr2 (17-87)||(12994376-12994446)
chr2 (15-85)||(21213777-21213847)
chr2 (49-94)||(29964814-29964859)
chr2 (29-90)||(30359657-30359718)
chr2 (13-90)||(32106569-32106646)
chr2 (11-95)||(13803493-13803577)
chr2 (18-90)||(28846694-28846766)
chr2 (11-75)||(30410543-30410607)
chr2 (11-43)||(40755644-40755676)
chr2 (11-90)||(1435067-1435145)
chr2 (12-95)||(5147674-5147757)
chr2 (15-90)||(26482096-26482170)
chr2 (11-90)||(37755965-37756044)
chr2 (11-89)||(3001383-3001461)
chr2 (12-82)||(6658393-6658463)
chr2 (12-93)||(13519047-13519129)
chr2 (15-93)||(33962782-33962860)
chr2 (13-86)||(23140908-23140981)
chr2 (13-86)||(23552698-23552771)
chr2 (13-89)||(12801293-12801369)
chr2 (16-44)||(20217865-20217893)
chr2 (14-90)||(30808644-30808720)
chr2 (14-78)||(32650593-32650657)
chr2 (11-90)||(33569852-33569932)
chr2 (18-90)||(41908639-41908711)
[»] scaffold0002 (2 HSPs)
scaffold0002 (11-90)||(94965-95044)
scaffold0002 (15-95)||(142151-142231)
[»] chr3 (62 HSPs)
chr3 (11-90)||(16354886-16354965)
chr3 (11-90)||(27093355-27093434)
chr3 (11-90)||(4222144-4222223)
chr3 (11-90)||(53412948-53413027)
chr3 (12-90)||(37788460-37788538)
chr3 (11-95)||(10445133-10445218)
chr3 (13-90)||(14186651-14186727)
chr3 (14-90)||(30311309-30311385)
chr3 (11-90)||(46518631-46518710)
chr3 (12-82)||(32651433-32651503)
chr3 (13-90)||(31520601-31520678)
chr3 (18-86)||(8170679-8170747)
chr3 (11-90)||(31788964-31789043)
chr3 (23-83)||(7975428-7975488)
chr3 (11-90)||(15048055-15048134)
chr3 (11-90)||(28703398-28703477)
chr3 (12-86)||(2667869-2667943)
chr3 (12-86)||(8075122-8075196)
chr3 (11-90)||(34062542-34062623)
chr3 (12-90)||(36720384-36720462)
chr3 (13-90)||(10499105-10499182)
chr3 (13-90)||(26481930-26482007)
chr3 (34-95)||(28928896-28928957)
chr3 (12-93)||(30510194-30510275)
chr3 (14-86)||(19154638-19154710)
chr3 (61-96)||(10969938-10969973)
chr3 (15-86)||(14339617-14339688)
chr3 (15-90)||(18316497-18316571)
chr3 (15-90)||(42799746-42799820)
chr3 (15-90)||(47454615-47454690)
chr3 (11-90)||(53863862-53863940)
chr3 (16-90)||(26871503-26871577)
chr3 (11-93)||(39253698-39253779)
chr3 (13-86)||(4844507-4844580)
chr3 (13-86)||(4870203-4870276)
chr3 (17-90)||(8051217-8051290)
chr3 (15-95)||(17034986-17035064)
chr3 (13-86)||(21960558-21960631)
chr3 (17-90)||(27923043-27923116)
chr3 (13-90)||(51903874-51903951)
chr3 (46-90)||(9832500-9832544)
chr3 (58-90)||(26988999-26989031)
chr3 (15-90)||(5499405-5499480)
chr3 (15-82)||(8368797-8368864)
chr3 (15-90)||(40268492-40268566)
chr3 (12-90)||(203093-203171)
chr3 (16-90)||(8390640-8390714)
chr3 (19-85)||(11612307-11612373)
chr3 (12-94)||(13808880-13808962)
chr3 (11-69)||(27259185-27259243)
chr3 (15-81)||(47236969-47237035)
chr3 (15-89)||(49494144-49494218)
chr3 (22-95)||(3054992-3055065)
chr3 (13-86)||(16991549-16991622)
chr3 (13-90)||(40063622-40063699)
chr3 (13-90)||(47810740-47810817)
chr3 (11-83)||(2709387-2709459)
chr3 (54-90)||(11092206-11092242)
chr3 (15-95)||(13164757-13164837)
chr3 (22-86)||(17554778-17554842)
chr3 (9-93)||(47824115-47824199)
chr3 (15-67)||(54990728-54990780)
[»] scaffold0180 (1 HSPs)
scaffold0180 (11-82)||(19956-20027)
[»] chr6 (28 HSPs)
chr6 (12-90)||(12188298-12188376)
chr6 (13-90)||(33549107-33549184)
chr6 (17-89)||(10338174-10338246)
chr6 (12-90)||(13330090-13330168)
chr6 (11-95)||(14278105-14278188)
chr6 (11-90)||(1056679-1056758)
chr6 (13-90)||(12234503-12234580)
chr6 (13-86)||(24507532-24507605)
chr6 (14-90)||(19638001-19638077)
chr6 (15-87)||(34444809-34444881)
chr6 (15-90)||(14557965-14558040)
chr6 (15-86)||(21418477-21418548)
chr6 (23-90)||(31622997-31623064)
chr6 (34-93)||(34293833-34293892)
chr6 (11-89)||(6776601-6776679)
chr6 (11-89)||(27989651-27989729)
chr6 (16-90)||(30127403-30127477)
chr6 (12-77)||(20213057-20213122)
chr6 (12-77)||(22107080-22107145)
chr6 (13-73)||(6385882-6385942)
chr6 (14-90)||(32613137-32613213)
chr6 (11-90)||(3779342-3779421)
chr6 (11-93)||(4105048-4105133)
chr6 (15-86)||(24641188-24641259)
chr6 (11-82)||(28363948-28364019)
chr6 (47-93)||(13441050-13441096)
chr6 (13-94)||(6691547-6691627)
chr6 (14-63)||(23910108-23910157)
[»] scaffold0258 (1 HSPs)
scaffold0258 (13-90)||(15319-15396)
[»] scaffold0299 (1 HSPs)
scaffold0299 (11-87)||(11534-11610)
[»] scaffold0194 (1 HSPs)
scaffold0194 (13-89)||(13042-13118)
[»] scaffold0070 (2 HSPs)
scaffold0070 (14-86)||(42517-42589)
scaffold0070 (48-93)||(38933-38978)
[»] scaffold0122 (1 HSPs)
scaffold0122 (19-86)||(6921-6988)
[»] scaffold0118 (1 HSPs)
scaffold0118 (11-90)||(41627-41706)
[»] scaffold0063 (1 HSPs)
scaffold0063 (11-90)||(35383-35462)
[»] scaffold0337 (1 HSPs)
scaffold0337 (13-86)||(1760-1833)
[»] scaffold0032 (1 HSPs)
scaffold0032 (13-90)||(112285-112362)
[»] scaffold1367 (1 HSPs)
scaffold1367 (12-87)||(835-910)
[»] scaffold0238 (2 HSPs)
scaffold0238 (11-90)||(5196-5275)
scaffold0238 (11-44)||(2705-2738)
[»] scaffold0065 (1 HSPs)
scaffold0065 (11-86)||(12196-12271)
[»] scaffold0004 (1 HSPs)
scaffold0004 (15-89)||(81562-81636)
[»] scaffold0126 (1 HSPs)
scaffold0126 (11-76)||(25341-25406)
[»] scaffold0172 (1 HSPs)
scaffold0172 (18-90)||(32770-32842)
[»] scaffold0006 (1 HSPs)
scaffold0006 (11-75)||(18317-18381)
[»] scaffold0291 (1 HSPs)
scaffold0291 (15-86)||(2468-2539)
[»] scaffold0417 (1 HSPs)
scaffold0417 (13-90)||(10222-10299)
[»] scaffold0300 (1 HSPs)
scaffold0300 (12-85)||(4348-4421)
[»] scaffold0189 (1 HSPs)
scaffold0189 (15-88)||(17722-17794)
[»] scaffold0517 (1 HSPs)
scaffold0517 (16-88)||(7725-7797)


Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 11 - 434
Target Start/End: Original strand, 7918463 - 7918881
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattatcaactaaggaactag 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  7918463 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggttatcaaccaaggaactag 7918562  T
Q  111 tgttccctttccaacaaccaagaccgaacatccggcttagttagatatcaaatcaagacttcagttatcatgaaagcaaatatcacaaaacagctattag 210  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7918563 cgttccctttccaacaaccaagaccgaacatccggcttagttagatatcaaatcaagacttcagttatcatgaaagcaaatatcacaaaacagctattag 7918662  T
Q  211 gaataaatacttagtcacaggnnnnnnnnnnnnnnnnnnnnaagtctatcaatatgcaatcaaacctacacttcagaccactacacaatactaatacaga 310  Q
    |||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7918663 gaataaatacttagtcacagg-----tttttttttttttttaagtctatcaatatgcaatcaaacctacacttcagaccactacacaatactaatacaga 7918757  T
Q  311 caagtatgctacacaacaaacctcacaaccacagcctccaatttttcatctataatggaagggccataaggatctgtgattggtacagcttgcacttcca 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7918758 caagtatgctacacaacaaacctcacaaccacagcctccaatttttcatctataatggaagggccataaggatctgtgattggtacagcttgcacttcca 7918857  T
Q  411 actctggcttaacagactgcatgt 434  Q
    ||||||||||||||||||||||||    
T  7918858 actctggcttaacagactgcatgt 7918881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 34984888 - 34984809
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  34984888 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 34984809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 25627139 - 25627060
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  25627139 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgg 25627060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 14285243 - 14285164
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||    
T  14285243 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgg 14285164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 3252283 - 3252362
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||| | |||||| ||||||||||||| ||  |||| ||||||||||||||||||||||||||    
T  3252283 cagagagaatcgaacctgagagcctgaggaagagtgcactcccaagtctcaagtcaataccactaggccaacccaagtgg 3252362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 30883196 - 30883271
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||| | ||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgg 30883271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 21549132 - 21549210
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||||| | |||| || ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  21549132 agagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 21549210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 87423 - 87496
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| ||||| ||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| ||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgg 87496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 892479 - 892543
Alignment:
Q  22 gaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||| ||||||||||||||||| |||||  |||| ||||||||||||||||||||||||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaa 892543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 16773889 - 16773810
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||| ||||| ||||||||| || ||||| |||||||    
T  16773889 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgg 16773810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 18595995 - 18596074
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||  |||||||||||||||||  ||| ||||||||    
T  18595995 cagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatccaagtgg 18596074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 29075863 - 29075784
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| | ||| || |||||||||  ||||||||| | |||||||||||||||||||| |||||||||||    
T  29075863 cagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgg 29075784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 17028259 - 17028345
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattatcaa 98  Q
    |||| ||||| ||||| ||||||||||||||||  |||||||| || |||| ||||||| |||||| |||||||||||| |||||||    
T  17028259 agagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaagtgggttatcaa 17028345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 26078046 - 26078124
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| ||||||||| ||| ||   ||||||| || |||| |||||||||||||||||||||||||||    
T  26078046 agagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgg 26078124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 16436692 - 16436622
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    |||||||| | ||||||||||||||||  |||||| || | |||||||||||||||||||||||||||||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactccaag-tcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 16457888 - 16457813
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||| | ||||||||||||||||  |||||| |||| ||||||||||||||| ||||||||| ||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgg 16457813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 21589370 - 21589291
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| ||||||||||| |||| | |||||| ||   |||||||||| ||||||||||||||| ||||||||||||||||    
T  21589370 cagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgg 21589291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 22737164 - 22737085
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| ||||||||||| |||| ||| |||||||  |||| ||| || |||||||||||||||||| |||||||||||||    
T  22737164 cagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgg 22737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 43442278 - 43442207
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| |  ||| |||||||||||| ||||||    
T  43442278 cagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 16638896 - 16638818
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| | ||| ||||| ||| ||||||||| |||||| |||||||||| || |||| ||||||||||||    
T  16638896 agagagaatcgaacatgagatcttgaagagaagtgcactctcaggtttcaagccaatatcattaggacaacccaagtgg 16638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 5390853 - 5390919
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||| |||||| |||||||||  |||||||| |  ||||||||||||||||||||||||||||    
T  5390853 aatcgaacctgagacctcgaggaggag--cactcccaagccccaagccaataccactaggccaacccaa 5390919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 25979251 - 25979194
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaata 69  Q
    |||||||||||||||| ||||||||||||||||  ||||||||  |||||||||||||    
T  25979251 agagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 30109308 - 30109381
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||||  ||||||||  |||||||||||  |||||||||||||| | ||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgg 30109381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 6844810 - 6844732
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||||||| |||||| ||||||||   ||||||||  ||||||| |||||||||  |||||||||||||||    
T  6844810 agagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgg 6844732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 17155906 - 17155831
Alignment:
Q  9 agcagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| |||||||| ||||| |||||||||||||||  |||||| ||||| |||| ||||||||||||  |||||||||    
T  17155906 agcacagagaatcaaacctgagaccttgaggagga--gcactctcaggtcccaaaccaataccactaaaccaacccaa 17155831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 19043539 - 19043461
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| || |||||| |||| ||||| ||||   |||||||| |||||||| ||||| ||||||||||||||||||||    
T  19043539 agagaggattgaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaacccaagtgg 19043461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 41730623 - 41730549
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||||||| | | ||||||||| ||||  |||||| | |||||||  ||||||||||||||||||||||    
T  41730623 agagagaatcgaacatgataccttgaggtggagcacactccaatgttccaactcaataccactaggccaacccaa 41730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 18437166 - 18437085
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||||||||||||  | || |||||||||||  ||||| || || |||||  |||||||||||||||||| |||||||||    
T  18437166 agagagaatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtggatt 18437085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 37258360 - 37258429
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggcca 80  Q
    ||||||||||||||||| | ||||||||||||||  |||||| || | |||||| |||||||||| ||||    
T  37258360 cagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaataccactaagcca 37258429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 14804666 - 14804746
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||||||||||||||||| | ||| ||||   ||||| ||  | |||| |||||| |||||||||||||||||||||||    
T  14804666 gagagaatcgaacctaagacttagagaaggaacacactcacaaatcccaaaccaataacactaggccaacccaagtggatt 14804746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 16172982 - 16173056
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||| ||||||  |||||| ||||  |||||||| || || ||||||||||||||||    
T  16172982 gagaatcgaacctgagaccttga-gaggagcacactccaaggtctcaagccaacactaccaggccaacccaagtgg 16173056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 27596409 - 27596342
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggc 78  Q
    |||||||||||||| ||||||||| |||||||||  ||||| ||| | |||||| |||||||| ||||    
T  27596409 cagagagaatcgaatctaagacctcgaggaggaggacactctcagatcccaagctaataccacgaggc 27596342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 31669023 - 31669097
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||| ||||||   ||||| |||| ||||||||| ||||  || |||||||||||||    
T  31669023 gagaatcgaacctaagaccttga-gaggagcagactccaaggtcccaagccaacaccatcagaccaacccaagtgg 31669097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 39327086 - 39327137
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagc 64  Q
    |||||||||||| |||||||||||||||||||  |||||||| || ||||||    
T  39327086 gagagaatcgaagctaagaccttgaggaggagcacactcccatgtcccaagc 39327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 3315293 - 3315251
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggt 57  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||    
T  3315293 gagaatcgaacctgagaccttgaggaggagcgcactccaaggt 3315251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 12877775 - 12877693
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||||||||| |||| |||||||| |   ||||||||  | |||| ||||| ||||||| ||||| ||||||||||    
T  12877775 cagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccactagaccaactcaagtggatt 12877693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 22020858 - 22020932
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    |||||||||||| || |||| |  ||||||||  ||||||||| | |||||| |||||||||| |||||||||||    
T  22020858 gagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaacccaag 22020932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 29692382 - 29692455
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||  ||||| |||| |||||||||||  ||||||||| | |||| |||||||||| || |||||||||    
T  29692382 gagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaa 29692455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 30700612 - 30700689
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| ||| |||||| ||||||| || |||||  ||||| |||||| |||| |||||| |||||||||||| ||||||    
T  30700612 cagagataattgaacctgagaccttaagaaggag--cactctcaggttacaagtcaatacgactaggccaacctaagtgg 30700689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 5e-66; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 287 - 434
Target Start/End: Complemental strand, 31237956 - 31237809
Alignment:
Q  287 accactacacaatactaatacagacaagtatgctacacaacaaacctcacaaccacagcctccaatttttcatctataatggaagggccataaggatctg 386  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31237956 accactacacaatactaatacagataaatatgctacataacaaacctcacaatcacagcctccaatttttcatctataatggaagggccataaggatctg 31237857  T
Q  387 tgattggtacagcttgcacttccaactctggcttaacagactgcatgt 434  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31237856 tgattggtacagcttgcacttccaactctggcttgacagactgcatgt 31237809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 31238139 - 31238008
Alignment:
Q  94 atcaactaaggaa-ctagtgttccctttccaacaaccaagaccgaacatccggcttagttagatatcaaatcaagacttcagttatcatgaaagcaaata 192  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||         
T  31238139 atcaactaaggaagctagtgttccctttccaacaacttaaaccaaacattcggcttagtttgatatcaaatcaagacttcagttatcatgaaggc----- 31238045  T
Q  193 tcacaaaacagctattaggaataaatacttagtcacag 230  Q
     ||||||||||||||||| ||||||||||| |||||||    
T  31238044 -cacaaaacagctattagaaataaatacttggtcacag 31238008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 18540380 - 18540301
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  18540380 cagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgg 18540301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 3624660 - 3624583
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 3624583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 16852418 - 16852343
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 16852343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19703485 - 19703560
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgg 19703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 11518877 - 11518950
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||||| |||||||||||    
T  11518877 gaatcgaacctaagaccttgaggaggggtacactcccaagttccaagcctataccactaggctaacccaagtgg 11518950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 2203570 - 2203495
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| || ||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  2203570 gagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 2203495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 8794339 - 8794418
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||| ||||||||||  |||| |||||||||||||||||||||||| ||||| ||||||||    
T  8794339 cagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccactatgccaatccaagtgg 8794418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 12988510 - 12988431
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||| ||||||||| | ||||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||    
T  12988510 cagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgg 12988431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 33017296 - 33017217
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||  || ||||||||||||||||    
T  33017296 cagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaacccaagtgg 33017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 968442 - 968365
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| |||||| |||||||||  ||||||||||| ||||||||||||||| |||||||| |||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgg 968365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 35690058 - 35690140
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||||||||| ||||||||||||||||   || ||||| | |||||||||||||||||||||||| ||| ||||||    
T  35690058 cagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaacacaaatggatt 35690140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 44780109 - 44780187
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| ||||| ||||| ||||||||||||||||  |||||||| || |||||||||| |||||||||||||||||||||    
T  44780109 agagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgg 44780187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 5264608 - 5264547
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  5264608 agacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgg 5264547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 13129750 - 13129671
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| | |||||||||||||| ||||||||| || |||| ||||| ||||| ||| |||||||||||    
T  13129750 cagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaatgccactgggctaacccaagtgg 13129671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28783138 - 28783063
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| | ||||||||||||||||  |||||||||||  |||||||||||||| | ||||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgg 28783063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 11819857 - 11819783
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| ||||||||||| ||||||||||||||||  |||||||| || ||||||| ||||||||||| ||||||||    
T  11819857 agagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 11819783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 29858049 - 29858122
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| |||||| |||||||||  ||||||| ||| ||||||||||||||| ||||||| ||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgg 29858122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 6536602 - 6536538
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 75  Q
    |||||||||| |||||| ||||||||||||||||  |||||| |||| |||||||||||||||||    
T  6536602 cagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 20994451 - 20994531
Alignment:
Q  11 cagagagaatcgaacctaagaccttgagg-aggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||| ||| |||| |||||| |||||  ||||||||||| ||||| ||||||||||||||||||||||||||    
T  20994451 cagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgg 20994531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 26688936 - 26688868
Alignment:
Q  22 gaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| ||||||||||||||||  |||||| |||| ||||||||| ||||| ||||||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 26688868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 23361643 - 23361722
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| |||||| ||||||||||||||||  ||||||||  | ||||| ||||||||| ||| ||||||||||||    
T  23361643 cagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgg 23361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 27750811 - 27750728
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||| ||||||||||| ||||||||||||||||  |||||||| || ||||||| ||||||| ||| |||||||| ||| ||||    
T  27750811 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggttat 27750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28750648 - 28750574
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| |||||||| |||||||| |||||||||| |||||||  |||||||| |||||||||| |||||    
T  28750648 gagaatcgaaccgaagaccttaaggaggagcgcactcccagattccaag-taataccaccaggccaaccccagtgg 28750574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 11793520 - 11793594
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| ||||||||||||||||||||||  |||||| |||| |||||| || ||||| || |||||||||||||    
T  11793520 agaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagaccaacccaagtgg 11793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 18897243 - 18897169
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| | ||||||||||||||||  |||||  |||| |||| |||| ||||||||||||||||||||||    
T  18897243 agaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgg 18897169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 23874386 - 23874460
Alignment:
Q  21 cgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||| |||||| ||||||| |   | |||||||| |||||||||||||||||||||||||||||||| ||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggttat 23874460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 30483879 - 30483957
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| |||||| ||||  ||||||||||  ||||||||  | |||||||||||||||| |||||||||||||||    
T  30483879 agagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgg 30483957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 22193360 - 22193420
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccac 73  Q
    ||||||||||||||||||||||||||||||||  ||||||||||  ||||| ||| |||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaagtcaacaccac 22193420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 29431090 - 29431014
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| || |||  ||||||||  |||||||| || ||||||||||||| | ||||||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgg 29431014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 6436549 - 6436628
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||||| || |||||||| |||||||  |||||| | || ||||||||||||||| ||| ||||||||||||    
T  6436549 cagagggaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgg 6436628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 6530884 - 6530810
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||| ||||| |||||  |||||| |||| ||||||||| ||||| ||||||||||||||||    
T  6530884 gagaatcgaacctgagacattgag-aggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgg 6530810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 11492070 - 11492147
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgga 91  Q
    ||||||||||||||||||||| ||| |||||  ||||||||| |  ||||||||||||   | |||||||||||||||    
T  11492070 agagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccgacatgccaacccaagtgga 11492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3524399 - 3524451
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa 67  Q
    |||||| |||||||||||||||||||||||  |||||| |||| |||||||||    
T  3524399 gagaattgaacctaagaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 3826774 - 3826850
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| ||| || | |||||||  ||||| ||  |  |||||||||||||||||||||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgg 3826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 6569768 - 6569844
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| | | ||||  ||||||||  ||||||||| | ||||||||||| ||||||||||||| ||||||    
T  6569768 agagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgg 6569844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 18546360 - 18546439
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatta 94  Q
    ||||||||||||| |||||| |||||||||    ||| ||||| ||||  |||||||||||| |||||| ||||||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagaccaacctaagtggatta 18546439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 33727868 - 33727942
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| ||||||||||| ||||||||||||||||  |||| ||| ||  ||| || ||||||||||| ||||||||    
T  33727868 agagggaatcgaacctgagaccttgaggaggagcacacttccaagtctcaaacctataccactagggcaacccaa 33727942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 36043058 - 36042984
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| ||| |||  ||||||   |||||||| | |||||||||||||||| || |||||||||||||    
T  36043058 agaatcgaacctgagatcttacggaggaacacactcccaagatccaagccaataccaccagcccaacccaagtgg 36042984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 36205273 - 36205195
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||| | ||||||||||||||||  ||||||||| |  ||| |||||| ||  || ||||||||||||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtggatt 36205195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 43594313 - 43594383
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    |||||||||||||||| |||||||||||||||   || ||| || | | ||||||||| ||||||||||||    
T  43594313 agagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaatatcactaggccaac 43594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 8485079 - 8485002
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||  | ||||||  | ||||||  ||||| ||||| |||||| |||||||| ||||||||||||||||    
T  8485079 gagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgg 8485002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 20225396 - 20225465
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaa 81  Q
    |||||||||| || |||| | |||||||||||||  |||| |||||||||| |||||| ||||| |||||    
T  20225396 agagagaatcaaatctaaaatcttgaggaggagtatactctcaggttccaaaccaatatcactaagccaa 20225465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 25389527 - 25389455
Alignment:
Q  22 gaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||| ||||| ||||||   ||||| |||| ||||||||||||||| ||| |||| ||||||||||||    
T  25389527 gaacctaagatcttgaagaggagcatactcctaggtcccaagccaataccacgagg-caactcaagtggattat 25389455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 35641897 - 35641974
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| |||| | |||||||||  ||||||||  |  |||||| ||||||| || |||||||||||||    
T  35641897 gagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgg 35641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 3058046 - 3058118
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||||||| ||||||||  ||||||  |||||||| |  |||| |||||||||| || |||||||||    
T  3058046 agagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaacccaa 3058118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 15948045 - 15948105
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccac 73  Q
    |||||||||||||||| ||| | |||||||||   ||||||| || |||||||||||||||    
T  15948045 gagagaatcgaacctatgacatcgaggaggagcatactcccaagtcccaagccaataccac 15948105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 28566183 - 28566108
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| | || ||||||| |||||  |||||  |||| |||| |||||||||||||| ||||||||||||    
T  28566183 agagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccactaggtcaacccaagtgg 28566108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 28573806 - 28573731
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| | || ||||||| |||||  |||||  |||| |||| |||||||||||||| ||||||||||||    
T  28573806 agagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccactaggtcaacccaagtgg 28573731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 36371552 - 36371473
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  36371552 cagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 36371473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 33700767 - 33700846
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  33700767 cagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtgg 33700846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 4566630 - 4566551
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  4566630 cagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgg 4566551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 9165189 - 9165273
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||| |||||| |||| |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  9165189 cagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 9165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 1247195 - 1247117
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||  || |||||||| |||||||||||||    
T  1247195 cagagagaatcgaacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagccaacccaagtg 1247117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 15786317 - 15786393
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| ||||||||||||||||  ||||||||| | |||||||||||| ||||| |||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 8177176 - 8177247
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    ||||||||||||||||| | ||||||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  8177176 cagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaac 8177247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 31794258 - 31794337
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||||||   ||||||||||||||||  |||||||| || ||||||||||||||||||||||||||||||||    
T  31794258 cagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgg 31794337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 51703861 - 51703786
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||||||| | || |||||||||||  ||||||||| |||||||||||||||||||| |||||||||    
T  51703861 cagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaa 51703786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 17745250 - 17745328
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||||||||||| | |||||| |||||||||  ||| | ||||| |||||||||||||||||||||||||||||||    
T  17745250 cagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 21547474 - 21547551
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    ||||||||||||||||| | |||| |||||||||  | |||||| || ||||||||||||||||||||||||||||||    
T  21547474 cagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagt 21547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 10526905 - 10526821
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||||||| || ||||||||||||||||   |||||||||| |||||||||||||||| | ||||||||| ||| ||||    
T  10526905 cagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggttat 10526821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 2799944 - 2799865
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| |  |||||| ||||||||||||||| | ||||||    
T  2799944 cagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgg 2799865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19528325 - 19528400
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||||||||||  |||||  || | ||||||||||||||| ||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgg 19528400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 6122875 - 6122801
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| ||||||||||| ||||||||||||||||  |||||||| || ||||||| ||||||||||| ||||||||    
T  6122875 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 6122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 11063637 - 11063563
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||||||||||||||||||||||   ||||  ||||| ||||||||||||||||||  ||||||||    
T  11063637 agagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaa 11063563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 6650677 - 6650605
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacc 83  Q
    ||||||||||||||||| |||| |||||||||||   |||||| | | |||||||||||||||||||||||||    
T  6650677 cagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaacc 6650605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 8904496 - 8904417
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| | ||||||||||||||||  ||||| ||  | ||||| |||||| |||||||||||||||||||    
T  8904496 cagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgg 8904417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 16169976 - 16170051
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| | |||||||||||||   ||||||||||| ||||| ||||||||| |||| |||||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgg 16170051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 21267987 - 21268066
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| |||| ||||||| |||||||||  |||||||| || |||||||||||| ||||| ||||| |||||||    
T  21267987 cagagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatactactagcccaactcaagtgg 21268066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 52116779 - 52116850
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||| |||||| |||| |||||||||||  |||||||| || ||||||||||||||| ||||||||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 52116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 52336768 - 52336839
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    |||||| |||||||||| ||| ||| ||||||||  ||||||||| | ||||||||||||||||||||||||    
T  52336768 cagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 3266006 - 3265948
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaata 69  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| |||||||| |||||    
T  3266006 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 19088291 - 19088213
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||| ||||||||||||| ||||||||||||||| || || ||  |  || |||||||||||||||||||||||||||    
T  19088291 cagagtgaatcgaacctaaaaccttgaggaggagtacaatctcaaatctcaggccaataccactaggccaacccaagtg 19088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 40257476 - 40257402
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||| | |||||| |||||||||  |||||||||||  |||||||||||||| ||||||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgg 40257402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 48400251 - 48400178
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    |||||||||| |||| |||||||||| |||||||| |||| |||| ||||||||||||||  |||||||||||||    
T  48400251 gagagaatcgcacctgagaccttgag-aggagtgcgctccaaggtcccaagccaataccatcaggccaacccaag 48400178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 50901662 - 50901584
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa-taccactaggccaacccaagtgg 90  Q
    ||||||||||||  | |||||| |||||||||  |||| |||||| ||||||||| |||||||||||||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgg 50901584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 2220052 - 2219975
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| |||||| |||||| ||  ||||  ||||||||||||||||||||| ||  ||||||||||||    
T  2220052 gagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccagaacaacccaagtgg 2219975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 51814574 - 51814497
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||||||||||||||||  ||||| ||| |  |||| ||||||||  ||||||||||||||||    
T  51814574 gagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgg 51814497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 18459227 - 18459305
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaat-accactaggccaacccaagtgg 90  Q
    ||||||||| || |||||||||  ||||||||  |||||||| || |||||||||| |||||||| |||||||||||||    
T  18459227 gagagaatcaaatctaagacctcaaggaggagcacactcccaagtcccaagccaattaccactagaccaacccaagtgg 18459305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 35700036 - 35699959
Alignment:
Q  11 cagagagaatcgaacc--taagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||||||  | |||||||||| || ||  |||| |||| ||||||| ||||||||||||||||||||||    
T  35700036 cagagagaatcgaacccctgagaccttgagcagaagcacacttccagtttccaagtcaataccactaggccaacccaa 35699959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 44126476 - 44126398
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| || || |||||| | |||||||  ||||||||||| ||| | ||||||||| ||||||||||||||||    
T  44126476 agagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgg 44126398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 16893474 - 16893397
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| |||||||||| |||||| |||||||||| ||||||||  |  |||||||||||||  ||| ||||||||||||    
T  16893474 gagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgg 16893397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 24730447 - 24730386
Alignment:
Q  30 gaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgga 91  Q
    |||||||| ||||||  ||||||||| |  |||| |||||||||||||||||||||||||||    
T  24730447 gaccttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgga 24730386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 39012366 - 39012294
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||||||||||||| || ||  |||||| |||| ||||||||| ||||||||||||||| ||||||    
T  39012366 gaatcaaacctaagaccttgagaag-agcacactccaaggtcccaagccaacaccactaggccaaccaaagtgg 39012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 41508895 - 41508834
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||  ||||||||| | |||| ||| |||||| ||||||||||||||||    
T  41508895 agaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgg 41508834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 17410309 - 17410233
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgga 91  Q
    ||||||||||| | ||| || ||||||||   ||||||||| | |||| ||||||||||||||||||||||| ||||    
T  17410309 gagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaattgga 17410233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 21694520 - 21694449
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| ||||||||||||| |   |||||||| ||  |||||||||||||| ||| ||||||||||||    
T  21694520 agaatcgaacctgagaccttgaggagca---cactcccaagtctcaagccaataccaccaggtcaacccaagtgg 21694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 952589 - 952514
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||| ||||| |||| ||||||| |||  ||||||||||| ||||||||| ||||| || ||||| |||||||    
T  952589 gagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagaccaactcaagtgg 952514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 15581140 - 15581214
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||| ||||||| || |||||  |||||| |||| ||||||||| ||||| ||||||||||||||||    
T  15581140 gagaattgaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 15581214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 25297850 - 25297775
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||| ||||| |||||| |||||||||  ||||| ||| | | ||| |||||||||||| |||||||||||||    
T  25297850 gagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgg 25297775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 31383795 - 31383854
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccac 73  Q
    |||||||||||||| |||||   ||||||||  ||||||||||| |||||||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccac 31383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 42787289 - 42787218
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacc 83  Q
    ||||||| ||||| || |||| ||||||||||  |||||| || || ||||| |||||||||||||||||||    
T  42787289 agagagactcgaatctgagactttgaggaggaacgcactctcaagtcccaagtcaataccactaggccaacc 42787218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 4825049 - 4824975
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||| ||||| ||||||||| ||||||  |||||| |||| ||||||||| ||||  || ||||||||||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaagtg 4824975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 26232416 - 26232462
Alignment:
Q  47 cactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||| |  ||||||||||||||||| ||||||||||||||||    
T  26232416 cactcccagatctcaagccaataccactagaccaacccaagtggatt 26232462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 35187965 - 35187919
Alignment:
Q  47 cactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||| || |||||||| |||||||||||||||||||||| ||||||    
T  35187965 cactctcaagttccaagtcaataccactaggccaacccaaatggatt 35187919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 35692073 - 35692135
Alignment:
Q  31 accttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||||| |||||||||| | |||||| ||||||||| || | ||| ||||||||||    
T  35692073 accttgaggaggattgcactcccaagatccaagtcaataccaccagactaactcaagtggatt 35692135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 7743326 - 7743403
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||| | |||||| ||||||||   ||||||||  |||| ||  ||||||||||||||||||||||||| ||||    
T  7743326 aatcgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggttat 7743403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 14787331 - 14787408
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    |||||||||||||||| | ||||||||||| |   ||||| |||||  |||| ||||||||||||| |||| ||||||    
T  14787331 agagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccactaggtcaactcaagtg 14787408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 19940868 - 19940945
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| ||||| ||||||| ||||||||  |||||| |||  |||||| || ||||| || |||||||||||||    
T  19940868 gagagaatcaaacctgagaccttaaggaggagcacactccaaggacccaagctaacaccaccagaccaacccaagtgg 19940945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 24019101 - 24019072
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggag 44  Q
    ||||||||||||||||||||||||||||||    
T  24019101 gagaatcgaacctaagaccttgaggaggag 24019072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 36428790 - 36428717
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    ||||||| ||| | ||||||||||||||||   ||||| |||| ||||||||| |||||  |||||||||||||    
T  36428790 gagaatcaaacatgagaccttgaggaggagcatactccaaggtaccaagccaacaccacccggccaacccaagt 36428717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 37047060 - 37046988
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| ||||| |||||||||| |||||  |||||| |||| ||||||||| ||||| || |||||||||||||    
T  37047060 gaatcaaacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgg 37046988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 44486170 - 44486230
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| |||||  |||||| ||||||||| |||| ||||||||||||| ||||||||    
T  44486170 agaccttgag-aggagcacactccaaggttccaaaccaacaccactaggccaatccaagtgg 44486230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 15904693 - 15904613
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa-taccactaggccaacccaagtgg 90  Q
    |||||||||||||| || |||  |||||||||||   |||||||||| | ||||||| ||||||||| |||||| ||||||    
T  15904693 cagagagaatcgaatctgagattttgaggaggaggatactcccaggtcctaagccaattaccactagaccaacctaagtgg 15904613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 37400351 - 37400279
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    |||||||||| | ||||||| ||||||||  ||||  |||||  |||||||||||||| || |||||||||||    
T  37400351 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagt 37400279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 43446041 - 43445969
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||||| | ||||||||||||||||  |||||| |||  ||||||||| ||||  | |||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaacaccatcaagccaacccaag 43445969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 44046162 - 44046206
Alignment:
Q  31 accttgaggaggagtgcactcccaggttccaagccaataccacta 75  Q
    ||||||||||||||  ||||||||| | |||||||||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 50920036 - 50919972
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 75  Q
    ||||||||||||||||| | ||||| |||| |||  ||||| |||||| |||| |||||||||||    
T  50920036 cagagagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaataccacta 50919972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 26459404 - 26459483
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  26459404 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 26459483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 39631925 - 39631842
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  39631925 agagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 43215265 - 43215187
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| ||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||||||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgg 43215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 30442567 - 30442491
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| ||||||||||||||||   |||||||||| |||||||||||||||| |||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgg 30442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 23552199 - 23552121
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| ||||| ||||||||||||||||||||    
T  23552199 agagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgg 23552121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 17113877 - 17113793
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||||||| | ||||||||||||| ||  ||||||||||||| |||||||||| ||||||||| ||||||||| ||||    
T  17113877 cagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaactaggccaccccaagtgggttat 17113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 19553531 - 19553460
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    |||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||||||    
T  19553531 gagaattgaacctaagaccttgaggaggagcacactcccagg-tccaagccaataccaccaggccaacccaag 19553460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 4566422 - 4566505
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatta 94  Q
    ||||||||||| ||||| |||||||||| |||| | |||||| |||| | ||| ||||||||||||||||||||||||||||||    
T  4566422 cagagagaatcaaacctgagaccttgagaaggaatacactccaaggtccgaagtcaataccactaggccaacccaagtggatta 4566505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 22760941 - 22760866
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||||| || |||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgg 22760866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 30579417 - 30579338
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||||||| |||||||||||||| |  |||||||||||  |||||||||||||| ||||||||||||||||    
T  30579417 cagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgg 30579338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 7721451 - 7721369
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||| |||| ||||||||||| | ||| ||||| ||||||    
T  7721451 cagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccacttgaccaccccaaatggatt 7721369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 17041008 - 17041085
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||||||||||||||||  |||| |||| | |||||||||| ||||||| |||||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgg 17041085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 25021347 - 25021408
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  25021347 agactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 25021408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 33222452 - 33222387
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactag 76  Q
    ||||||||||||||||| |||||||||||| |||| |||| |||||| ||||||||||||||||||    
T  33222452 cagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccactag 33222387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 2962541 - 2962469
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacc 83  Q
    ||||||||||||||||| ||| ||||||||||||  ||||| |||||||||| ||||||||||||| ||||||    
T  2962541 cagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccactagaccaacc 2962469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 33869439 - 33869523
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||||||||  |||||||||| |||||  |||| ||||||  ||||||||||| ||||||||||||||||||| ||||    
T  33869439 cagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggttat 33869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 18363777 - 18363694
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||| ||||| ||||||||||||||||  ||||||||  |  |||||| |||||||||||||||||||||||| ||||    
T  18363777 agagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttat 18363694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 20335829 - 20335904
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||||| |||||||||  |||||||| || ||||||||||||| |||| |||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgg 20335904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 25956291 - 25956361
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||| ||||||||||||||||| |||||  |||||| |||| ||||||||||||||||||||||||||||    
T  25956291 gagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaataccactaggccaacccaa 25956361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 38374597 - 38374672
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||||||||||  |||||  |||| ||||||||| ||||| | ||||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgg 38374672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 42836016 - 42836079
Alignment:
Q  32 ccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  42836016 ccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 42836079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 43590985 - 43590914
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||| |||| |||||||||||  |||||||| || ||||||||||||||| ||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 43590914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 45976928 - 45976999
Alignment:
Q  22 gaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||| ||| ||||| ||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||    
T  45976928 gaacttaaaaccttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtggatt 45976999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 14058333 - 14058259
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||||||||| |||||||||||| |||  ||||| ||||||||||| ||||||||| |||||||| ||||    
T  14058333 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaag 14058259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 14368361 - 14368287
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||||||||| |||||||||||| |||  ||||| ||||||||||| ||||||||| |||||||| ||||    
T  14368361 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaag 14368287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 42712036 - 42711962
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||||||| | ||||||||||||||||  |||||||| || |||||| |||||||||| |||||||||||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaacccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 5273586 - 5273663
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| |||| ||||||||||||||||||||||  |||||  |||| ||||||||| ||||| ||||||||||||||||    
T  5273586 gagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgg 5273663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 41519258 - 41519335
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    ||||||||| ||||||| ||||||||||||||||  |||||| |  | ||||| ||||||||||||||||||||||||    
T  41519258 cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 15905672 - 15905747
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgga 91  Q
    ||||||||||||| ||||||  ||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  15905672 gagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgga 15905747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 41487436 - 41487365
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| ||||||||||||| |   |||||||| || ||||||||||||||| ||||||||||||||||    
T  41487436 agaatcgaacctgagaccttgaggagaa---cactcccaagtcccaagccaataccaccaggccaacccaagtgg 41487365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 24513872 - 24513793
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattatca 97  Q
    |||||||||| ||||||  ||||| ||| ||||||||  |  ||||||||||||||||||||||||||||||| ||||||    
T  24513872 aatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggttatca 24513793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 45559246 - 45559203
Alignment:
Q  47 cactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  45559246 cactccaaggttccaagccaataccactaggccaacccaagtgg 45559203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 7801253 - 7801183
Alignment:
Q  20 tcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||| ||||||||| ||||||  ||||||||||| ||||| ||||||||| ||||||| ||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgg 7801183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 39499718 - 39499792
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| | ||||||| | |||||   ||||| ||||| ||||||||||||||||||||||||||||||||    
T  39499718 agaatcgaacatgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgg 39499792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 45709704 - 45709777
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| |||||||||| |||||| |||||||||  ||||| ||| | |||||| |||||||||||||||||||||    
T  45709704 gagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaa 45709777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 9608624 - 9608688
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactag 76  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| | ||||||| ||||||||||    
T  9608624 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccactag 9608688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 9836196 - 9836260
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactag 76  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| | ||||||| ||||||||||    
T  9836196 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccactag 9836260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 21877886 - 21877814
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||||| | ||||||| ||||||||  | ||||||||| ||||| |||||||||||||||||| ||||    
T  21877886 gagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 31835267 - 31835195
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| ||||||||||||||||  |||||| ||   ||||||||| ||||| ||||||||||||||||    
T  31835267 aatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgg 31835195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 48772013 - 48771941
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| ||||||  ||||||||  ||||||||| | ||||||||||||||| | ||||||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgg 48771941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 5579240 - 5579307
Alignment:
Q  23 aacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| ||||||||||||||||  |||||| |||| ||||||||| ||||| ||| ||||||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgg 5579307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 7744106 - 7744185
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||| ||||||||||||||||   | |||||| | | ||||| ||||||||||||||||| ||||||    
T  7744106 cagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtgg 7744185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 15137635 - 15137556
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||| ||||||||||||||||  |||||| |  | ||||| || |||||| ||||||||||||||||    
T  15137635 cagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgg 15137556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 26199587 - 26199512
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||| ||  | ||||||| || || ||||| |||||||||||||||||||||||| |||||||    
T  26199587 gagaatcgaacctgagatctcaaagaggagtacattctcaggtcccaagccaataccactaggccaactcaagtgg 26199512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 5830598 - 5830672
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||| |||||||| | | | ||||||||||||| |||||||||||||||| |||||| |||| | |||||||||    
T  5830598 agagataatcgaacttgaaatcttgaggaggagtacactcccaggttccaaaccaatatcactggaccaacccaa 5830672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 36803629 - 36803703
Alignment:
Q  19 atcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||| ||| || |||||||||||   |||||||||| ||||| |||||||||||| ||||||||| ||||||    
T  36803629 atcgaacttaaaactttgaggaggagcatactcccaggtcccaagtcaataccactagaccaacccaaatggatt 36803703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 2446388 - 2446311
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| | ||| || |||||||||  |||||||| || ||||||||||||||  || |||||||||||||    
T  2446388 gagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgg 2446311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 7499922 - 7499995
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    ||||||||||||| |||||| || ||||||   |||| ||||| ||||||||||| |||||||| |||||||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcactaggctaacccaagt 7499995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11720958 - 11721031
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    |||||||||| || | ||||| ||||||||  || |||||||| ||||||||||||||| ||||||||| ||||    
T  11720958 gagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccaccaggccaaccgaagt 11721031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 13106776 - 13106817
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcc 52  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  13106776 cagagagaatcgaacctgagaccttgaggaggagtacactcc 13106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 11700247 - 11700179
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggcc 79  Q
    ||||||||||||||||| ||||||||||||||||   |||| || ||  ||||||||| ||||||||||    
T  11700247 cagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaatgccactaggcc 11700179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 20952145 - 20952225
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||| ||||||| || |||  |||||||||||  ||||||||||| |||| |||||||||  ||| |||||||||||||||    
T  20952145 gagataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtggatt 20952225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 21558210 - 21558134
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||||||||||| ||||||||||||||||  || ||  |||||||||| |||||| || | |||||| ||||    
T  21558210 cagagagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaatactaccaagccaacacaag 21558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 23301599 - 23301675
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||| ||| | ||||||  ||||||||  |||||||| || ||||| ||||||||| ||||||||||||||||    
T  23301599 agagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgg 23301675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 29385740 - 29385816
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||| ||||| ||||||||||||||||  |||||| | || ||||||||| ||||   |||||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtgg 29385816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 25655222 - 25655301
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| | |||||||||||||   ||||| ||| | ||||| |||||||||||  |||||||| ||||    
T  25655222 cagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgg 25655301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 28236593 - 28236636
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaatacca 72  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||    
T  28236593 agacctcgaggaggagcgcactcccaggtcccaagccaatacca 28236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 33181205 - 33181279
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| ||||||||||| ||| ||||||  ||||  |||||||| || ||||||| ||||||||||| ||||||||    
T  33181205 agagggaatcgaacctgagatcttgagttggagcacactcccaagtcccaagcctataccactagggcaacccaa 33181279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 35328874 - 35328947
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| ||||||| |||||||| || ||  |||||  |||||||||||||| ||||| ||||||||||||||||    
T  35328874 agaatcaaacctaaaaccttgag-agaagcacactcgaaggttccaagccaacaccaccaggccaacccaagtgg 35328947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 3280497 - 3280558
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||  ||||| | ||| ||||||||||||||| | | ||||||||||||    
T  3280497 agaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgg 3280558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 21854612 - 21854551
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| |||||||||||  ||||||||| | || |||||||||||  ||||||||||||||||    
T  21854612 agactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtgg 21854551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 22932707 - 22932784
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| || ||||| ||| |||||  | ||| |||||||||||| ||||||||||||||| |  |||||||||||||    
T  22932707 gagagattcaaacctgagatcttgaataagagcgcactcccaggtcccaagccaataccaccataccaacccaagtgg 22932784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 44309908 - 44309977
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaa 81  Q
    |||||||||| || |||| | |||||||||||||  |||| |||||||||| |||||| ||||| |||||    
T  44309908 agagagaatcaaatctaaaatcttgaggaggagtatactctcaggttccaaaccaatatcactaagccaa 44309977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 25590686 - 25590614
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||  |||||| |||||||||  ||||||||| |  |||||||||||||  ||| ||||||||||||    
T  25590686 aatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgg 25590614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 35119462 - 35119390
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||||||| | | |||||||| |||   || ||||| | ||||| ||||||||||||||||||||||    
T  35119462 agagaatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaa 35119390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 43663091 - 43663171
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||| |||||||| ||| || ||||||||   | |||| |||| ||||| ||||||||  |||||||||||||||||||    
T  43663091 gagagattcgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtggatt 43663171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 8e-28; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 37109345 - 37109424
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  37109345 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 37109424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 7292793 - 7292871
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  7292793 agagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 37274453 - 37274533
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa-taccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  37274453 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgg 37274533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 7949448 - 7949527
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||||||||||  |||||| |||| ||||||||||||| |||||||| |||||||||    
T  7949448 cagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgg 7949527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 19680782 - 19680861
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||||||||||||||||| |||  |||||||| || |||||| |||||||||||||||| ||||||||    
T  19680782 cagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgg 19680861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2185028 - 2185099
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaaccc 84  Q
    ||||||||||||||| |||| ||||| |||||  |||||||||||||||||||| |||||||||||||||||    
T  2185028 gagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggccaaccc 2185099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 49576890 - 49576968
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgga 91  Q
    ||||||||||||||| ||||||||||||||||  |||||||| || | ||||||||||||| |||||||||||| ||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaattgga 49576968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 15180820 - 15180744
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||||||||||| |   ||||||||||| |||||||||||||||||| |||| | ||||||    
T  15180820 cagagagaatcgaacctaagaccttgaggagta---cactcccaggtcccaagccaataccactagaccaatctaagtgg 15180744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 46545793 - 46545709
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||| ||||||| || ||| ||||||||||||  ||||| |||||  ||||||||||||||||||||||||||||||| ||||    
T  46545793 cagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggttat 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 1730483 - 1730570
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattatcaa 98  Q
    |||||||||| ||| || |||| |||| ||||||  ||||| ||||| ||||||||||||||||||| |||||||||||| |||||||    
T  1730483 cagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggttatcaa 1730570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19238575 - 19238650
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||  |||||| |||||||||  |||||||| || ||||||||||||||| ||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgg 19238650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 23378037 - 23377974
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 75  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||| |||||    
T  23378037 agagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 31759652 - 31759731
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| ||||||||| || ||||||||||||||||  |||||||| || ||||||||||||||||||  ||||||||||||    
T  31759652 cagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgg 31759731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 37720212 - 37720287
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||  ||||||||||||| |  ||||||||||| ||||||||||| ||| ||||||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgg 37720287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 38869850 - 38869783
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggc 78  Q
    ||||| ||||||||||| ||||||||||||||||  ||||||||| | ||||||||||||||||||||    
T  38869850 cagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 55427198 - 55427273
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||||| ||| |||||   |||||||||| ||||||||||||||| ||||||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgg 55427273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 2622389 - 2622472
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagcc----aataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| |||| | |||||||||  ||||||||||| |||||||    |||||||||||||||||||||||||    
T  2622389 cagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgg 2622472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 16581775 - 16581711
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 75  Q
    |||||| ||| |||||| ||||||||||||||||   ||||||||||||||||||||||||||||    
T  16581775 cagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 28635778 - 28635694
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||||||||||||||||  ||||||||  ||||||||| | ||||| || |||||| ||| |||||||||||| ||||    
T  28635778 cagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggttat 28635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8030199 - 8030277
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| ||||||||| | ||||||||||||||||  |||||||| || ||||||| ||||||||||| ||| ||||||||    
T  8030199 agagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgg 8030277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 32475092 - 32475165
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    |||||||||||||| |||||||||| |||||| ||||||  ||| ||||||||| |||||||| |||||||||||    
T  32475092 agagaatcgaacctgagaccttgag-aggagttcactccagggtcccaagccaacaccactagaccaacccaagt 32475165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 51250522 - 51250595
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| | ||| ||||||| ||||  ||||||||| | ||||||||||||||| ||||||||||||||||    
T  51250522 gaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgg 51250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 41683808 - 41683752
Alignment:
Q  34 ttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||| ||||||||||||    
T  41683808 ttgagaaggagcacactctcaggttccaagccaataccactaggtcaacccaagtgg 41683752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 4249259 - 4249180
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||| ||||||||||||||||  |||||| |  | ||||||| ||||||||||||||| | ||||||    
T  4249259 cagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgg 4249180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 8325377 - 8325452
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||||||||||||| |||  |||||| ||||  |||||||| |||||  | |||||||||||||    
T  8325377 gagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgg 8325452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 9241028 - 9241103
Alignment:
Q  20 tcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||| |||||| ||| |||||  |||| |||| | ||||||||||||||| |||||||||||||||| ||||    
T  9241028 tcgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 27965540 - 27965583
Alignment:
Q  47 cactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| | ||||||||||||||||||||||||||||||||    
T  27965540 cactcccagatcccaagccaataccactaggccaacccaagtgg 27965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 37443756 - 37443705
Alignment:
Q  39 gaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||| ||||||||| | ||||||||||||||||||| ||||||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgg 37443705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 37980146 - 37980224
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatta 94  Q
    ||||||||||||| |||||||||| |||||  |||||| |||| ||||||||| | ||| ||||||||||||||| ||||    
T  37980146 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggccaacccaagtgaatta 37980224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 39509148 - 39509073
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||||| |||||||||  ||||||||| | |||||||| |||||  || |||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgg 39509073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 11592147 - 11592209
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccac 73  Q
    |||||| ||||||||||||||||| |||||||||  ||||| ||||| ||||| |||||||||    
T  11592147 cagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaaggcaataccac 11592209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 29195175 - 29195098
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| |  ||||||||| |||||  |||||| |||| ||||||||| ||||| ||||||||||||||||    
T  29195175 agagagaatcgaacttgcgaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 29195098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31826685 - 31826607
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||| | ||||||||||||||||  ||||| ||  | ||||||| ||||||||||| |||||||||||| ||||    
T  31826685 gaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggttat 31826607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 33438513 - 33438551
Alignment:
Q  52 ccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  33438513 ccaggttccaagccaataccactagaccaacccaagtgg 33438551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 13265103 - 13265184
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||||| || | ||| | ||||||||  || |||||||| ||||||||||||| |||||||||| ||||| ||||    
T  13265103 agagagaatcgaatctgaaaccataaggaggagcacattcccaggtcccaagccaatacctctaggccaactcaagtagatt 13265184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 24827897 - 24827828
Alignment:
Q  21 cgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||| |||||| ||||||||| |||||||||||| ||||| |||||||||  | |||||| ||||||    
T  24827897 cgaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgg 24827828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 24234725 - 24234649
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||||||||| | ||||||| |||| |||  |||||||| || |||||||||||||||  || |||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacctggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 27372651 - 27372723
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacc 83  Q
    |||||| |||||||||||||||||| | ||||||  || ||||| ||| ||| ||||||| ||||||||||||    
T  27372651 cagagataatcgaacctaagaccttaaagaggagcacattcccaagtttcaaaccaatactactaggccaacc 27372723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 47044795 - 47044715
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||||| |||||| |||||||||   |||| ||| | ||||| ||||||||| ||||||| |||||||| ||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 5795407 - 5795482
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||| ||||| ||||||||||||||||   ||||| |||| ||||| ||| ||||| || |||||||||||||    
T  5795407 gagaatcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgg 5795482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 13015507 - 13015444
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactag 76  Q
    ||||||||||||| | |||| | |||||||||  |||||||| || ||||||||||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 38838877 - 38838846
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggag 44  Q
    ||||||||||||||||||||||||||||||||    
T  38838877 gagagaatcgaacctaagaccttgaggaggag 38838846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 44865412 - 44865337
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||||||||||  |||  | |||   |||||||| ||||  ||||||||||||||||    
T  44865412 gagaatcgaacctaagaccttgaggaggagcacacatcaaggactcaagccaacaccatcaggccaacccaagtgg 44865337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 46295175 - 46295100
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||||||||||  |||||| | || ||||||||| || || || |||||| ||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacctaagtgg 46295100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 56410028 - 56409954
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||| ||||||  |||||| |||| ||||||||| | ||| |||||| |||||||||    
T  56410028 gagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaacagcaccaggccagcccaagtgg 56409954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 5450170 - 5450090
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagcc---aataccactaggccaacccaagtggatt 93  Q
    ||||||||| || | ||||||||||||||  ||||||||| |||||||||   ||||||||||| |||||| || ||||||    
T  5450170 agaatcgaatctgaaaccttgaggaggagcacactcccagattccaagccaataataccactagtccaacctaaatggatt 5450090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 12798765 - 12798687
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| | |||| |||||| ||  ||||||||| |  ||| ||||||||||| || ||||||||||||    
T  12798765 agagagaatcgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgg 12798687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 13901788 - 13901746
Alignment:
Q  47 cactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    |||||||||||  ||||||||||||||||| ||||||||||||    
T  13901788 cactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 40283985 - 40284059
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| ||||| |||||||||||||  |  |||||||| || ||||||||||||||  | ||||||||||||||    
T  40283985 agaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtgg 40284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 47202435 - 47202473
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaa 67  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  47202435 agaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 9936959 - 9937032
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    ||||||||||||| | || | |||||||||  |||||||| ||  |||| | ||||||||||||||||||||||    
T  9936959 gagaatcgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagt 9937032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 10048062 - 10047997
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactag 76  Q
    ||||||||||||||||| ||||| |||| |||||   ||||  |||| ||||||||||||||||||    
T  10048062 cagagagaatcgaacctgagaccatgagaaggagcatactcttaggtcccaagccaataccactag 10047997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 29312272 - 29312321
Alignment:
Q  37 aggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||  ||||||||  | ||||||||||||||||||||||||||||    
T  29312272 aggaggagaacactcccacatcccaagccaataccactaggccaacccaa 29312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 30938217 - 30938278
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactag 76  Q
    ||||||||||||| |||||| |||||||||  |||||| || | |||| |||||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccactag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 33619285 - 33619204
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||||||||||||||  |||||||   | ||||||| | | ||||||||||||| | | |||||||||||| ||||    
T  33619285 agagaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggttat 33619204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 33632130 - 33632191
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaatacca 72  Q
    ||||||||||||| |||  |||||||||||||||   |||||||  ||||||||||||||||    
T  33632130 cagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaatacca 33632191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 46329241 - 46329192
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagcc 65  Q
    |||||||||||| | ||||||||||||||  ||||||||||| |||||||    
T  46329241 agaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 4923631 - 4923555
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    ||||||||| ||| || ||||||||| || |||  ||||  || ||||||| |||||| ||||||||||||||||||    
T  4923631 agagagaattgaatctgagaccttgacgatgagcacactttcaagttccaaaccaataacactaggccaacccaagt 4923555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 32992690 - 32992638
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa 67  Q
    ||||||||||| | ||||||||||||||||  |||||| |||| |||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 53496959 - 53496899
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaatacc 71  Q
    ||||||||||| || || |||| |||||||||||  ||||||||||| |||| ||||||||    
T  53496959 cagagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaatacc 53496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 42327392 - 42327468
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 42327468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 42922497 - 42922417
Alignment:
Q  11 cagagagaatcgaacctaagacctt-gaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42922497 cagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 42922417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 42602634 - 42602557
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| |||||||||||||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 42602557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 16918572 - 16918651
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||| | |||| |||||||||||||||||||||||||||    
T  16918572 cagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgg 16918651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 29503349 - 29503274
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||||||||||  ||||||||||| |||| |||||||||||||||||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgg 29503274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 40416384 - 40416463
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||| ||||||||   |||||||||||||||| ||||||||||||||||||||||||||    
T  40416384 cagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgg 40416463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 11062441 - 11062358
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||| ||||| ||||||||||||| ||  |||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  11062441 agagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttat 11062358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 37480153 - 37480078
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||||||||||  ||||| ||||| ||||||||||||||| ||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgg 37480078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 1729898 - 1729819
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| || ||||||||| |||||||||  |||||||| || |||||||||||||||||| |||||||||||||    
T  1729898 cagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgg 1729819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 4060208 - 4060287
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||| ||||||||| ||  ||||| |||||| ||| |||||||||||||||||||||||||||    
T  4060208 cagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgg 4060287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 21195671 - 21195745
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| ||||||||||| ||||||||||||||||  |||||||| |||||||||| ||||||||||| ||||||||    
T  21195671 agagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactagggcaacccaa 21195745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 11251169 - 11251090
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||| ||||||||||||||||  |||| ||| || ||||||||||||||||| ||||||| ||||||    
T  11251169 cagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgg 11251090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 19244191 - 19244112
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| |||||||| |||||||  ||||| ||||| ||||| |||||||| ||| |||||||||||||    
T  19244191 cagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgg 19244112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 23052521 - 23052596
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||||||| ||  |||||||| || ||||||||||||||| ||||||||| ||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgg 23052596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 39715070 - 39714995
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||||| |||||||||  ||||||||||| ||||| ||||||||| | ||||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgg 39714995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 34041582 - 34041661
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| ||||| ||||| ||||||||||||||||  ||||| ||| | | ||| ||||||||||||||||||||||||||    
T  34041582 cagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgg 34041661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 19322849 - 19322771
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| ||||  ||||||||| ||||||  ||||||||||| |||| |||||||||||||  ||||||||||||    
T  19322849 agagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgg 19322771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 7799031 - 7799108
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| || ||| || |||||||||  |||||||| || ||||||||||||||| ||| ||||||||||||    
T  7799031 gagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgg 7799108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 12086129 - 12086194
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    ||||||||||  ||||||||||||||||  |||| |||||| ||||||||||||||| ||||||||    
T  12086129 gaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggccaac 12086194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 29996456 - 29996533
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||||||| ||| ||||| || || || ||||||||| |||||||||||||||| | ||||||    
T  29996456 gagagaatcgaacctgagaccttaaggcggagtacattcacatgttccaagctaataccactaggccaatctaagtgg 29996533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaata 69  Q
    ||||||||||||||| ||||||||||||||||  |||| |||||| |||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 16381668 - 16381732
Alignment:
Q  31 accttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||||||  ||||| ||| | ||||||| |||||||||||||||||||||||| ||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggttat 16381732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 9318069 - 9318147
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| |||||| ||||| | ||||||||| |  |  ||| |||||||||||||||||||||||||||    
T  9318069 cagagagaatcgaacctgagacct-gaggaagggtgcactccgaattctcaaaccaataccactaggccaacccaagtgg 9318147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 14500359 - 14500280
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| || |||||| |||||||||  ||||||||| |  |||||  ||||||||||||||| ||||||||    
T  14500359 cagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgg 14500280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 4438973 - 4439059
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattatca 97  Q
    |||| |||||||||| |  |||||||||||||||  ||||| ||| | |||||  ||||||| ||||||||||||||||| ||||||    
T  4438973 cagaaagaatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttatca 4439059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 12994376 - 12994446
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||| | ||||||| ||||||||  ||||||||||| ||||| |||||||||||| ||||| ||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaag 12994446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 21213847 - 21213777
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaaccca 85  Q
    ||||||||||||| ||||||  |||||||   ||||||||||| ||||||||||||||| || ||||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 29964859 - 29964814
Alignment:
Q  49 ctcccaggttccaagccaataccactaggccaacccaagtggatta 94  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||    
T  29964859 ctcccaggtttcaagccaataccactaggtcaacccaaatggatta 29964814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 30359718 - 30359657
Alignment:
Q  29 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||  |||||| |||| ||||||||| ||||| | ||||||||||||||    
T  30359718 agaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 32106646 - 32106569
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| || |||||||||||  ||||  |||||| |||| ||||| ||| ||||| ||||||||||||||||    
T  32106646 gagagaatcgagcccaagaccttgagagggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgg 32106569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 13803577 - 13803493
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||| |||||||||| ||||||||||||||||  |||||| | ||  |||||||||| ||||||  |||||||| ||| ||||    
T  13803577 cagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggttat 13803493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28846766 - 28846694
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| |||| | |||||||||  ||||||||||| ||||| ||||||||||||  ||||| ||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgg 28846694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 30410543 - 30410607
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 75  Q
    |||||| |||||||| | || |||||||||||||  |||||| |||| |||||||||||||||||    
T  30410543 cagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaataccacta 30410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 40755676 - 40755644
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggagga 43  Q
    |||||||||||||||||||||||||||||||||    
T  40755676 cagagagaatcgaacctaagaccttgaggagga 40755644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 1435145 - 1435067
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| | ||||||||||||| ||  |||||| |  | |||||||| |||||||| ||||||||||||||    
T  1435145 cagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgg 1435067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 5147674 - 5147757
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||||| |  |||||||||| |||||   |||||||| |  |||| |||||||||||| ||||||||||||| ||||    
T  5147674 agagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttat 5147757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 26482170 - 26482096
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||||| ||||||  |||||| |||| ||||||||| ||||  ||||||||| ||||||    
T  26482170 gagaatcgaacctgagaccttga-gaggagcacactcctaggtcccaagccaacaccatcaggccaacctaagtgg 26482096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 37755965 - 37756044
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| || |||||| | |||||| ||| |||||  || |||||||| ||||||||||||||| | ||||||||||||||    
T  37755965 cagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgg 37756044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 3001461 - 3001383
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    |||||| |||||||||| ||| ||  ||||||||  |||||| || |  |||| |||||||||||||||||||||||||    
T  3001461 cagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 6658463 - 6658393
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    |||||||||||||| | |||| |||||||| ||  |||| ||||||| ||| |||||| ||||||||||||    
T  6658463 agagagaatcgaacatgagactttgaggagaagcacacttccaggttacaaaccaatatcactaggccaac 6658393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 13519047 - 13519129
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactccc-aggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||||||||||| | ||||||  ||||||||  ||| ||| |  |||||| ||||||||||||||||||||||| ||||||    
T  13519047 agagagaatcgaacttgagacctcaaggaggagcacaccccccaaattccaaaccaataccactaggccaacccaaatggatt 13519129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 33962782 - 33962860
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||||||| |  ||| || |||||||||  ||||||||| | |||| |||||| || ||||||||||||||||||||    
T  33962782 gagaatcgaatccgagatctcgaggaggagcacactcccagttcccaaaccaatatcattaggccaacccaagtggatt 33962860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 23140908 - 23140981
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||||  |||| ||||||||||   ||| |||| || |||||||||||||| ||| |||||||||    
T  23140908 gagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagccaataccattagaccaacccaa 23140981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 23552698 - 23552771
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||||  |||| ||||||||||   ||| |||| || |||||||||||||| ||| |||||||||    
T  23552698 gagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagccaataccattagaccaacccaa 23552771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 12801369 - 12801293
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    |||||| |||||||| |||| |||||||||||   || ||||| | |||| | ||||||||||||||||| ||||||    
T  12801369 gagagagtcgaacctgagactttgaggaggagcatacccccagatcccaaactaataccactaggccaactcaagtg 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 20217893 - 20217865
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggag 44  Q
    |||||||||||||||||||||||||||||    
T  20217893 agaatcgaacctaagaccttgaggaggag 20217865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 30808644 - 30808720
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| || ||||||||||||||||   | || |||||  |||||||||| ||| || |||||||||||||    
T  30808644 agagaatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaagtgg 30808720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 32650593 - 32650657
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggc 78  Q
    |||||||||||||  |||||||||| |||||| ||||||||| |  |||| || |||||||||||    
T  32650593 agagaatcgaacccgagaccttgagcaggagtacactcccagatctcaagtcagtaccactaggc 32650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 33569852 - 33569932
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa-taccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| |||||| ||||| |||  |||| ||| || | ||||||| |||||||| ||||||||| ||||    
T  33569852 cagagagaatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaacccatgtgg 33569932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 41908639 - 41908711
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||| | ||||||||||||||||  |||||| ||||  ||| || | ||||| ||||||||||||||||    
T  41908639 aatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgg 41908711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 94965 - 95044
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| ||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  94965 cagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 142231 - 142151
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||| |||||||||||||||||||| ||  |||||| |||| | ||||||| ||||| ||| ||| | |||||| ||||    
T  142231 gagaattgaacctaagaccttgaggagtagcacactccaaggtccaaagccaacaccaccaggtcaatcaaagtgggttat 142151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 16354886 - 16354965
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  16354886 cagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgg 16354965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 27093355 - 27093434
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  27093355 cagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgg 27093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 4222223 - 4222144
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| | ||||||||||||||||| ||||||||||||||    
T  4222223 cagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgg 4222144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 53413027 - 53412948
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| |||||| ||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||||||||    
T  53413027 cagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 37788460 - 37788538
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| ||||||||||||||||  |||||| |||||||||| |||||||||| |||||||||||||||    
T  37788460 agagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgg 37788538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 10445133 - 10445218
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa-taccactaggccaacccaagtggattat 95  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  10445133 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggttat 10445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 14186727 - 14186651
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||||||||||||||||  |||||| |||| ||||| ||||||||||||||||||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgg 14186651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 30311385 - 30311309
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| ||||||||||||||||  ||||||||| | ||||||| ||||||||||||||||||| ||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgg 30311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 46518710 - 46518631
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||| | ||||||||||||||  ||||||||| | ||||||||||||||||| ||||||||||||||    
T  46518710 cagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgg 46518631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 32651433 - 32651503
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    ||||||||||||| || ||| ||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  32651433 agagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 31520601 - 31520678
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| |||||||||||| |||||||||  ||||||||| | |||||||||| |||| ||||||||||||||||    
T  31520601 gagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgg 31520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 8170747 - 8170679
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||| |||||||||| |||||  |||||||| ||| |||||||||||||||||||||||||||    
T  8170747 aatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaa 8170679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 31788964 - 31789043
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||| ||||||| |||| |||||||||  ||||||||| | ||||||||||| ||||||||||||||||||||    
T  31788964 cagagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgg 31789043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 7975488 - 7975428
Alignment:
Q  23 aacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacc 83  Q
    ||||||||||||||||||||||  ||||||||| | ||||||| |||||||||||||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacc 7975428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 15048055 - 15048134
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||||||| ||||||||||||||||  || |||||| | ||||||| |||||| || ||||||||||||||    
T  15048055 cagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgg 15048134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 28703398 - 28703477
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||| | |||||| |||| |||| | |||||||||||||    
T  28703398 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgg 28703477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 2667943 - 2667869
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||| |||||||||| |||||| ||||| |||  ||||||||| | ||||||||||||||| ||||||||||||    
T  2667943 agagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 8075122 - 8075196
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||| ||||||||||| | ||||||||||||||  |||||||| || ||||||| ||||||||||| ||||||||    
T  8075122 agagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 34062542 - 34062623
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtg--cactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| |||||| |||||||||||||||| |  ||||||||  || |||||||||| |||| |||||||||||||||    
T  34062542 cagagagaattgaacctgagaccttgaggaggagagcacactcccaaatttcaagccaatatcactgggccaacccaagtgg 34062623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 36720462 - 36720384
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| | |||| |||||||||  ||||||||  | ||||||||||||||| || |||||||||||||    
T  36720462 agagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgg 36720384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 10499105 - 10499182
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||||||  |||| |||   |||||||| | ||||||||||||||| ||||||||||||||||    
T  10499105 gagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgg 10499182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 26482007 - 26481930
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||| || |||||||||||  ||||| ||||| |||||||| |||||| | || |||||||||||    
T  26482007 gagagaatcgaacctaaaactttgaggaggagcacactctcaggtcccaagccattaccaccaagctaacccaagtgg 26481930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 28928896 - 28928957
Alignment:
Q  34 ttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||||||||  ||||| ||| | ||||||||||||||||||||||| |||||||||||||    
T  28928896 ttgaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtggattat 28928957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 30510194 - 30510275
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||||||||||||| |||||| ||| |||||   ||||| |||| |||||||| |||||| ||| |||||||||||||||    
T  30510194 agagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtggatt 30510275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 19154710 - 19154638
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||||||| ||||||| ||||||||  ||||| ||||   ||||||||||| |||||||||||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaacccaa 19154638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 10969938 - 10969973
Alignment:
Q  61 aagccaataccactaggccaacccaagtggattatc 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  10969938 aagccaataccactaggccaacccaagtggattatc 10969973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 14339688 - 14339617
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||| |||| |||||||||||  ||||||||  | ||||||||||||||| ||||||| ||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaa 14339617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 18316497 - 18316571
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||| ||||||  |||||| |||| ||||||||  ||||| || |||||||||||||    
T  18316497 gagaatcgaacctaagaccttga-gaggagcacactccaaggtcccaagccagcaccaccagaccaacccaagtgg 18316571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 42799746 - 42799820
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| |||||||| |||||||||| |||||  |||||| |||| ||||||||| ||||| ||||||||||||||||    
T  42799746 gagagtcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 42799820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 47454615 - 47454690
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||||| |||||||||  |||||| || |  |||||||||||||||||  ||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgg 47454690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 53863862 - 53863940
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| |||||||||||||||| ||||||  |||||| |||| ||||||||| | ||| ||| ||||||||||||    
T  53863862 cagagagaattgaacctaagaccttga-gaggagcacactccaaggtcccaagccaacatcaccaggacaacccaagtgg 53863940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 26871503 - 26871577
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| ||||| |||| |||||||||||   ||||| |||| ||||||||| ||||| ||||||||||||||||    
T  26871503 agaatcaaacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaacccaagtgg 26871577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 39253779 - 39253698
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||| | ||||| | | ||||||||| ||||| |||||||||    
T  39253779 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagtcta-accactaggtcaacctaagtggatt 39253698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 4844507 - 4844580
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||| ||| |||||| |||||||||  ||||||||| | ||||| ||||||||| || |||||||||    
T  4844507 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 4870203 - 4870276
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||| ||| |||||| |||||||||  ||||||||| | ||||| ||||||||| || |||||||||    
T  4870203 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 8051290 - 8051217
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| | |||||| |||||| ||   ||| |||||| ||||||||||||||| ||||||||||||||||    
T  8051290 gaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgg 8051217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 17035064 - 17034986
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||||| |||||||||||| |||  ||||| ||| | ||||| ||||||||| ||  |||||||||||||||||    
T  17035064 gagaatcgaacctgagaccttgaggatgag--cactctcagatcccaagtcaataccaccagagcaacccaagtggattat 17034986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 21960631 - 21960558
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||||| || |||||| |||||||||  ||||| ||||| ||||||||||||||| ||  ||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaa 21960558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 27923043 - 27923116
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||| ||||  ||||||||||  |||| ||| || ||||||||||||||| ||||||||| ||||||    
T  27923043 gaatcgaacctgagactatgaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgg 27923116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 51903874 - 51903951
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| |||||  |||||||||  ||||||||| | ||||||||||||||  ||| ||||||| ||||    
T  51903874 gagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgg 51903951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 9832544 - 9832500
Alignment:
Q  46 gcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| |||||||||||||||  |||||||||||||||    
T  9832544 gcactcccaggtcccaagccaataccaccgggccaacccaagtgg 9832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 26989031 - 26988999
Alignment:
Q  58 tccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||||||||||||||||||||    
T  26989031 tccaagccaataccactaggccaacccaagtgg 26988999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 5499405 - 5499480
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||| ||||||| ||||||||  ||||| ||| |  |||| ||||||||| ||||||||||||||||    
T  5499405 gagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgg 5499480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 8368797 - 8368864
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    ||||||| ||||| |||||| ||||| |||  |||| ||||||| |||| ||||||||||||||||||    
T  8368797 gagaatcaaacctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaac 8368864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 40268566 - 40268492
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| ||||||| || |||||  |||||| |||| ||||||||| ||||| |||| |||||||||||    
T  40268566 gagaatcgaacctgagaccttaag-aggagcccactccaaggtcccaagccaacaccaccaggcaaacccaagtgg 40268492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 203171 - 203093
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||||||| | ||||| ||||  ||  ||||||| | | ||||| ||||||||||||||||||||||||||    
T  203171 agagataatcgaacctcaaaccttaaggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgg 203093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 8390714 - 8390640
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| ||||||||||||||| |||  |||| ||| ||  |||| |||||||||||| |||| ||||||||    
T  8390714 agaatcgaatctaagaccttgaggaagagcacacttccaagtctcaaggcaataccactagaccaatccaagtgg 8390640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 11612373 - 11612307
Alignment:
Q  19 atcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaaccca 85  Q
    ||||||||| ||||||| ||||||||  ||||||||| | |||||  |||||||| |||||||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 13808880 - 13808962
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatta 94  Q
    ||||||||| |||||| |||||| |||||||||  |||| |||| | ||||| |||||  || || |||||||||||||||||    
T  13808880 agagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtggatta 13808962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 27259243 - 27259185
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaata 69  Q
    ||||||||||| ||||| | |||| |||||||||  ||||||||||| |||||||||||    
T  27259243 cagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 47236969 - 47237035
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaa 81  Q
    ||||||||||| | ||||||||| ||||||  ||||||| ||| |||| |||||||||| |||||||    
T  47236969 gagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccaggccaa 47237035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 49494144 - 49494218
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||| ||||| |||||| ||||| |||  ||||||||  || |||| |||||||||||||| ||||||||||    
T  49494144 gagaatcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtg 49494218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 3055065 - 3054992
Alignment:
Q  22 gaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||| ||| ||||||||| ||  | |||| |||| ||||||||| ||||| |||||||||||||||| ||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaacccaagtgggttat 3054992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 16991622 - 16991549
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||| || || ||||||  | || |||| ||||||||| | ||||||||||||||| ||||||||||||    
T  16991622 gagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggccaacccaa 16991549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 40063699 - 40063622
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| | ||||||| ||||||||   |||| ||| | |||||||||||| |||| | ||||||||||||    
T  40063699 gagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgg 40063622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 47810740 - 47810817
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| ||||  |||||||| |||||||  |||||||| |  | ||||||||||||| || |||||||||||||    
T  47810740 gagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaacccaagtgg 47810817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 2709459 - 2709387
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacc 83  Q
    ||||||||||| ||||||| |||| |||||||||   ||| |||| | ||||  |||||||||||||||||||    
T  2709459 cagagagaatcaaacctaaaacctcgaggaggagcatacttccagatcccaacacaataccactaggccaacc 2709387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 11092206 - 11092242
Alignment:
Q  54 aggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  11092206 aggtcccaagccaacaccactaggccaacccaagtgg 11092242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 13164757 - 13164837
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    |||||| |||||||||||||||||||| ||  |||||| |||| | ||||||| ||||| ||| ||| | |||||| ||||    
T  13164757 gagaattgaacctaagaccttgaggagtagcacactccaaggtccaaagccaacaccaccaggtcaatcaaagtgggttat 13164837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 17554842 - 17554778
Alignment:
Q  22 gaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||| || ||||||||| |||  ||||||||||| ||||||||||||||| |  |||||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaataccaccaaaccaacccaa 17554778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 47824199 - 47824115
Alignment:
Q  9 agcagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||||||||||||||   |||| |||||||||||| ||||| ||| | ||||   |||| |||||||||||| ||| ||||||    
T  47824199 agcagagagaatcgaactagagactttgaggaggagtacactctcagatcccaaattaatatcactaggccaactcaaatggatt 47824115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 54990780 - 54990728
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaa 67  Q
    ||||||||||||| ||||||||||||||||  | |||| |||| |||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 19956 - 20027
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    ||||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  19956 cagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 12188298 - 12188376
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| | | ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  12188298 agagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 12188376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 33549184 - 33549107
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| |||||| |||||||||  ||||||||||| ||||||||||||||| || |||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgg 33549107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 10338174 - 10338246
Alignment:
Q  17 gaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||||||||||||||| | |||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 13330168 - 13330090
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| || ||||||||||||||||   ||||||| |||| ||| ||||||||||||| ||||||||||||    
T  13330168 agagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccactaggtcaacccaagtgg 13330090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 14278105 - 14278188
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggattat 95  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| | ||||||||| ||| ||||||||||| |||| ||||    
T  14278105 cagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaata-caccaggccaacccatgtgggttat 14278188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 1056679 - 1056758
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||| |||||||||| |||   ||||||| || ||| ||||||||||||||| ||||||||||||    
T  1056679 cagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccactaggtcaacccaagtgg 1056758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 12234503 - 12234580
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| |||||| |||  ||||  ||||||||||| ||||| ||||||||| ||||||||| ||||||    
T  12234503 gagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgg 12234580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 24507532 - 24507605
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||| |||||  ||||||||||||||||   ||||| |||| ||||||||| ||||||||||||||||||    
T  24507532 gagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 24507605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 19638001 - 19638077
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||| ||||| ||||||||||  ||||  ||||||||||||||| |||||||||||| | ||||| |||||||    
T  19638001 agagaatcaaacctgagaccttgagctggagcacactcccaggttccacgccaataccactggaccaacgcaagtgg 19638077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 34444881 - 34444809
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||||||| |||||||| |||||||  |||||  |||| ||||| ||||||||| |||||||||||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 14558040 - 14557965
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||| |||||  |||||||||  |||| |||||| ||||||||| ||||| || |||||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgg 14557965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 21418548 - 21418477
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||| | |||| | |||||||||  |||||||| || ||||||||||||||| ||||||||||||    
T  21418548 gagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 21418477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 31622997 - 31623064
Alignment:
Q  23 aacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||||| |||||||||  ||||||||||| |||||||||||||||  | |||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgg 31623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 34293833 - 34293892
Alignment:
Q  34 ttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    |||||||||||  ||||||||  |||||| |||||||||||||| |||||||||||||||    
T  34293833 ttgaggaggagcacactcccaaattccaaaccaataccactaggtcaacccaagtggatt 34293892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 6776601 - 6776679
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||||||| ||| | |||| | |||||||||  ||| ||||| | ||||||||||||||| |||||||||||||||    
T  6776601 cagagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 27989651 - 27989729
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    |||||| |||||||||| | ||||| || |||||   ||||||| ||||||||| |||||||||||||||| |||||||    
T  27989651 cagagataatcgaacctgaaaccttaagaaggagcatactcccaagttccaagctaataccactaggccaatccaagtg 27989729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 30127477 - 30127403
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| |||||| || ||||||  |||||||||   ||||||||||||||| || |||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgg 30127403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 20213122 - 20213057
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactagg 77  Q
    |||| ||||||||||| |||| |||||||||||  ||||||||||| ||||||  |||||||||||    
T  20213122 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 20213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 22107145 - 22107080
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactagg 77  Q
    |||| ||||||||||| |||| |||||||||||  ||||||||||| ||||||  |||||||||||    
T  22107145 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 22107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 6385942 - 6385882
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccac 73  Q
    ||||||||||||||| ||||||| ||||||||  || |||||||| ||||| |||||||||    
T  6385942 gagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccac 6385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 32613137 - 32613213
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||||| | ||| |||||| |||||  |||||||||   ||||| ||||||||| ||||||||||||||||    
T  32613137 agagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtgg 32613213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 3779421 - 3779342
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||| |||| ||| || |||||||||| |||||  |||||||| ||  |||||||||||||||||| ||||| ||||||    
T  3779421 cagagggaattgaatctgagaccttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacctaagtgg 3779342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 4105133 - 4105048
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaata---ccactaggccaacccaagtggatt 93  Q
    |||||| |||||||||| ||| ||| ||||||||  |||||| ||||| ||||||||||   ||||||| ||||| ||||||||||    
T  4105133 cagagaaaatcgaacctgagatcttaaggaggagcacactcctaggtttcaagccaataataccactagaccaactcaagtggatt 4105048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 24641188 - 24641259
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||| | |||| |||||||||  ||||||||| | ||||| ||||||||| | ||||||||||    
T  24641188 gagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaa 24641259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 28364019 - 28363948
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaac 82  Q
    |||||| ||||||| || ||||||||||||||||  ||||| ||| | |||| |||||||||||| ||||||    
T  28364019 cagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccactatgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 13441096 - 13441050
Alignment:
Q  47 cactcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||||||||| |||||||||||||||  | ||||||||||||||||    
T  13441096 cactcccaggtcccaagccaataccacccgaccaacccaagtggatt 13441050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 6691547 - 6691627
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtggatta 94  Q
    ||||||||||||||| ||||||||| ||||||  |||||| ||||   ||| ||| ||||| |||||||||||||| |||||    
T  6691547 gagagaatcgaacctgagaccttga-gaggagcacactccaaggtctaaagtcaacaccaccaggccaacccaagttgatta 6691627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 23910108 - 23910157
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaag 63  Q
    ||||| |||||||| ||||||||||||||||  ||||||||||| |||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 15319 - 15396
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| |||||| |||||||||  ||||||||||| ||||||||||||||| || |||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgg 15396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 11610 - 11534
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||| | ||||||||||||||| |||||| ||||||    
T  11610 cagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 13042 - 13118
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| |  |||||||||||||| | ||||||| |||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 42517 - 42589
Alignment:
Q  14 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||||||||| ||||  ||||||||||   |||||||| ||||||| ||||||||||||||||||||||    
T  42517 agagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaa 42589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 38933 - 38978
Alignment:
Q  48 actcccaggttccaagccaataccactaggccaacccaagtggatt 93  Q
    ||||| |||| ||||||||||||||| || ||||||||||||||||    
T  38933 actcctaggtcccaagccaataccaccagaccaacccaagtggatt 38978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 6921 - 6988
Alignment:
Q  19 atcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||| |||| |||||||||||  |||||||  || ||||||||||||||||||||||||||||    
T  6921 atcgaacctgagactttgaggaggagcacactccccagtcccaagccaataccactaggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 41627 - 41706
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||||||| |||||| |||||| |||||||||   |||| ||| |  |||||||||||||||||||||||||||||||    
T  41627 cagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgg 41706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 35383 - 35462
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||||| |||||||| ||||||||||||||||||   ||||| || |||||||||||||||||| ||| |||| ||||||    
T  35383 cagagataatcgaacttaagaccttgaggaggagcatactcctagattccaagccaataccactgggcaaaccgaagtgg 35462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 1833 - 1760
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    |||||||| |||||  ||||||||||||||||   ||||| |||| ||||||||| ||||||||||||||||||    
T  1833 gagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 112362 - 112285
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||| ||||||  | |||||   ||||||||| |||||||||||||| || ||||||||||||||||    
T  112362 gagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgg 112285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 835 - 910
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaag 87  Q
    |||||||||||||||| |||| | |||||||||  || |||||| | ||||||||||||||| |||||| ||||||    
T  835 agagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 5275 - 5196
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||| || || ||||||||  |||||||| || ||||||||||  ||||||| |||| |||||||    
T  5275 cagagagaatcgaacctaaaactttaaggaggagcacactcccaagtcccaagccaattacactaggacaactcaagtgg 5196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 2705 - 2738
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggag 44  Q
    ||||||||||||||||| ||||||||||||||||    
T  2705 cagagagaatcgaacctgagaccttgaggaggag 2738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 12271 - 12196
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||  ||| | ||||||||||||||||   ||||| |||| ||||||||| ||||||||||||||||||    
T  12271 cagagagaatttaactttagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 12196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 81562 - 81636
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtg 89  Q
    |||||||||| || ||||||||||||||||  |||| |||| |||||| |||||| |||||| |||||| |||||    
T  81562 gagaatcgaatctgagaccttgaggaggagcacacttccagattccaaaccaatatcactagaccaaccaaagtg 81636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 25341 - 25406
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactag 76  Q
    |||||| |||||||||| |||||||||| |||||  |||||||| ||  |||||||||||||||||    
T  25341 cagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccactag 25406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 32770 - 32842
Alignment:
Q  18 aatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    |||| ||| ||| |||||||||||||| |||| ||||| | |  |||||||||||| ||||||||||||||||    
T  32770 aatcaaacttaaaaccttgaggaggagcgcacccccagatcctcagccaataccaccaggccaacccaagtgg 32842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 18381 - 18317
Alignment:
Q  11 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 75  Q
    ||||||||||| ||||| | ||||||||||||||  || |||||| |||||||||||| ||||||    
T  18381 cagagagaatcaaacctgaaaccttgaggaggagcacaatcccagattccaagccaatgccacta 18317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 2468 - 2539
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 86  Q
    ||||||||||||| ||||||||||||||||  ||||||||| | | || ||||||||||  | |||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaa 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 10299 - 10222
Alignment:
Q  13 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 90  Q
    ||||||||| ||| |||||| | ||||||  | |||||||||| | ||||||||||| ||  ||||||||||||||||    
T  10299 gagagaatcaaacttaagacttcgaggagaggcgcactcccagatcccaagccaatatcatcaggccaacccaagtgg 10222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 4421 - 4348
Alignment:
Q  12 agagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaaccca 85  Q
    |||| ||||||||||||| ||||| || |||||  ||||||||  | ||||||| ||||||||||| |||||||    
T  4421 agagggaatcgaacctaaaaccttaagaaggagcacactcccaaatcccaagcctataccactagggcaaccca 4348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 17722 - 17794
Alignment:
Q  15 gagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    ||||||||||||| |||||||||| |||||  |||||| ||||   | ||||||||||| ||||||||||||||    
T  17722 gagaatcgaacctgagaccttgag-aggagaacactccaaggtcttacgccaataccaccaggccaacccaagt 17794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 7725 - 7797
Alignment:
Q  16 agaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagt 88  Q
    |||||||||| | ||||||| ||||||||  ||||  |||||  |||||||||||||| || |||||||||||    
T  7725 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagt 7797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 179 times since January 2019
Visitors: 3833