View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0616_low_34 (Length: 291)

Name: NF0616_low_34
Description: NF0616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0616_low_34
NF0616_low_34
[»] chr8 (60 HSPs)
chr8 (148-277)||(17841645-17841774)
chr8 (148-277)||(26041908-26042037)
chr8 (148-277)||(40779924-40780053)
chr8 (149-281)||(14128996-14129128)
chr8 (148-277)||(3596836-3596965)
chr8 (148-277)||(6108028-6108157)
chr8 (148-277)||(25581034-25581163)
chr8 (148-274)||(42754837-42754963)
chr8 (148-277)||(37985851-37985979)
chr8 (150-277)||(20091598-20091725)
chr8 (148-269)||(32064894-32065016)
chr8 (148-275)||(15187704-15187830)
chr8 (148-277)||(1645759-1645889)
chr8 (150-275)||(34665525-34665649)
chr8 (148-252)||(10044514-10044618)
chr8 (160-276)||(35353183-35353299)
chr8 (148-242)||(1503638-1503732)
chr8 (150-252)||(24211169-24211271)
chr8 (148-277)||(30055657-30055786)
chr8 (173-275)||(8453977-8454078)
chr8 (150-277)||(38017075-38017201)
chr8 (159-274)||(39772608-39772723)
chr8 (160-277)||(32393999-32394114)
chr8 (148-236)||(31347571-31347659)
chr8 (150-269)||(37132477-37132596)
chr8 (148-277)||(7022119-7022249)
chr8 (148-281)||(24844655-24844787)
chr8 (151-240)||(3890412-3890502)
chr8 (179-252)||(41819594-41819667)
chr8 (148-277)||(30834850-30834979)
chr8 (148-238)||(7017653-7017743)
chr8 (152-224)||(32064749-32064822)
chr8 (152-224)||(34665386-34665459)
chr8 (188-274)||(27835288-27835374)
chr8 (152-224)||(17841838-17841911)
chr8 (152-224)||(20091789-20091862)
chr8 (152-224)||(31347770-31347843)
chr8 (152-224)||(40780117-40780190)
chr8 (160-224)||(42755030-42755095)
chr8 (153-224)||(25581227-25581299)
chr8 (151-224)||(24844847-24844920)
chr8 (152-224)||(7017853-7017926)
chr8 (160-224)||(7021990-7022055)
chr8 (152-224)||(8453838-8453911)
chr8 (152-224)||(14128868-14128941)
chr8 (152-224)||(15187564-15187637)
chr8 (152-224)||(26042104-26042177)
chr8 (152-224)||(27782105-27782178)
chr8 (152-224)||(32393862-32393935)
chr8 (152-224)||(35353045-35353118)
chr8 (152-224)||(37986043-37986116)
chr8 (160-224)||(30835035-30835099)
chr8 (160-215)||(38016983-38017039)
chr8 (179-217)||(3890611-3890649)
chr8 (160-224)||(6108221-6108286)
chr8 (152-224)||(27835441-27835514)
chr8 (160-224)||(39772789-39772854)
chr8 (160-210)||(1886621-1886672)
chr8 (152-213)||(37132657-37132719)
chr8 (179-224)||(3817918-3817963)
[»] chr5 (40 HSPs)
chr5 (148-277)||(33584124-33584253)
chr5 (148-277)||(25398379-25398508)
chr5 (148-277)||(3521802-3521930)
chr5 (148-277)||(4892343-4892472)
chr5 (148-277)||(8145515-8145643)
chr5 (148-269)||(6043307-6043427)
chr5 (148-277)||(37321588-37321717)
chr5 (151-277)||(12850942-12851069)
chr5 (148-277)||(38899520-38899650)
chr5 (149-277)||(3362919-3363048)
chr5 (148-277)||(14138809-14138937)
chr5 (148-277)||(2477777-2477906)
chr5 (148-252)||(12614532-12614637)
chr5 (169-277)||(11360947-11361055)
chr5 (148-277)||(22912852-22912978)
chr5 (190-274)||(4433845-4433928)
chr5 (148-238)||(17545477-17545567)
chr5 (165-277)||(27481963-27482077)
chr5 (152-224)||(22913042-22913115)
chr5 (186-269)||(13664709-13664791)
chr5 (179-277)||(31640767-31640864)
chr5 (152-224)||(2477640-2477713)
chr5 (152-224)||(6043499-6043572)
chr5 (160-224)||(8145387-8145452)
chr5 (152-224)||(11361119-11361192)
chr5 (160-219)||(10458409-10458469)
chr5 (152-224)||(3362782-3362855)
chr5 (152-224)||(4433995-4434068)
chr5 (152-224)||(4892206-4892279)
chr5 (152-224)||(12614721-12614794)
chr5 (179-224)||(17545673-17545718)
chr5 (152-224)||(25398242-25398315)
chr5 (152-224)||(38899714-38899787)
chr5 (160-224)||(3521994-3522059)
chr5 (152-224)||(12850805-12850878)
chr5 (152-224)||(33584317-33584390)
chr5 (152-224)||(37321781-37321855)
chr5 (179-224)||(31640928-31640973)
chr5 (150-178)||(12614483-12614511)
chr5 (188-252)||(36880148-36880217)
[»] chr4 (57 HSPs)
chr4 (148-277)||(46441985-46442114)
chr4 (148-277)||(36073491-36073619)
chr4 (148-274)||(44893008-44893134)
chr4 (148-274)||(44893570-44893696)
chr4 (148-277)||(47290207-47290336)
chr4 (148-277)||(53123172-53123301)
chr4 (150-277)||(9089011-9089138)
chr4 (148-277)||(22199401-22199529)
chr4 (148-269)||(31078614-31078735)
chr4 (150-277)||(24128380-24128507)
chr4 (148-277)||(49387682-49387812)
chr4 (148-277)||(50156374-50156502)
chr4 (148-276)||(21802115-21802242)
chr4 (148-277)||(36073088-36073221)
chr4 (148-275)||(2624980-2625107)
chr4 (148-277)||(4751587-4751717)
chr4 (148-277)||(7744907-7745036)
chr4 (148-277)||(10442582-10442713)
chr4 (148-252)||(33530479-33530583)
chr4 (158-276)||(23964269-23964388)
chr4 (150-269)||(17655579-17655699)
chr4 (179-277)||(30563350-30563448)
chr4 (148-252)||(37219797-37219902)
chr4 (148-245)||(11314046-11314144)
chr4 (150-238)||(24392854-24392942)
chr4 (148-267)||(37934736-37934855)
chr4 (148-252)||(42671834-42671939)
chr4 (29-80)||(31726655-31726706)
chr4 (152-224)||(33530676-33530749)
chr4 (148-214)||(25063369-25063436)
chr4 (152-224)||(10442777-10442850)
chr4 (152-224)||(31078807-31078880)
chr4 (152-224)||(49387876-49387949)
chr4 (149-281)||(44744571-44744698)
chr4 (152-224)||(2624841-2624914)
chr4 (152-224)||(7745100-7745173)
chr4 (152-224)||(21802310-21802383)
chr4 (152-224)||(22199265-22199338)
chr4 (152-224)||(24392671-24392744)
chr4 (152-224)||(36072951-36073024)
chr4 (152-224)||(46441848-46441921)
chr4 (152-224)||(47290070-47290143)
chr4 (152-224)||(53123034-53123108)
chr4 (152-224)||(4751450-4751523)
chr4 (152-224)||(24128243-24128316)
chr4 (148-240)||(36073256-36073349)
chr4 (152-224)||(36073354-36073427)
chr4 (152-224)||(44893430-44893503)
chr4 (105-140)||(31726596-31726631)
chr4 (154-224)||(42671675-42671746)
chr4 (178-224)||(17655461-17655507)
chr4 (179-224)||(9088902-9088947)
chr4 (160-224)||(23964453-23964518)
chr4 (152-224)||(50156566-50156639)
chr4 (161-224)||(36073731-36073795)
chr4 (152-224)||(44893201-44893275)
chr4 (152-224)||(37934929-37935002)
[»] chr1 (39 HSPs)
chr1 (148-277)||(51737646-51737775)
chr1 (148-277)||(36966503-36966632)
chr1 (148-277)||(41876237-41876366)
chr1 (148-277)||(6883628-6883757)
chr1 (148-277)||(19015545-19015674)
chr1 (148-269)||(37821629-37821750)
chr1 (149-277)||(40215129-40215257)
chr1 (148-277)||(25463817-25463946)
chr1 (148-277)||(25973550-25973677)
chr1 (148-274)||(20304925-20305052)
chr1 (148-277)||(44094839-44094967)
chr1 (148-277)||(9910086-9910217)
chr1 (148-252)||(18404614-18404718)
chr1 (148-277)||(3559758-3559887)
chr1 (148-277)||(32000061-32000191)
chr1 (148-238)||(33786426-33786516)
chr1 (150-238)||(40273888-40273976)
chr1 (148-224)||(19722894-19722970)
chr1 (150-252)||(44690818-44690921)
chr1 (148-252)||(10167565-10167670)
chr1 (151-224)||(33786623-33786696)
chr1 (148-274)||(22157333-22157459)
chr1 (148-269)||(27523050-27523171)
chr1 (152-224)||(16045786-16045859)
chr1 (152-224)||(40214992-40215065)
chr1 (152-224)||(40273706-40273779)
chr1 (152-224)||(18404446-18404519)
chr1 (152-224)||(25463680-25463753)
chr1 (152-224)||(44094702-44094775)
chr1 (149-220)||(52064373-52064445)
chr1 (186-252)||(52329441-52329507)
chr1 (152-224)||(6883491-6883564)
chr1 (152-224)||(9910281-9910354)
chr1 (152-224)||(19015408-19015481)
chr1 (152-224)||(32000255-32000328)
chr1 (152-224)||(36966696-36966769)
chr1 (152-224)||(37821822-37821895)
chr1 (152-224)||(3559621-3559694)
chr1 (152-220)||(41876434-41876503)
[»] scaffold0228 (6 HSPs)
scaffold0228 (148-274)||(26080-26206)
scaffold0228 (148-274)||(16128-16254)
scaffold0228 (215-274)||(8546-8605)
scaffold0228 (160-224)||(8414-8479)
scaffold0228 (160-224)||(15996-16061)
scaffold0228 (160-224)||(25948-26013)
[»] chr2 (37 HSPs)
chr2 (148-277)||(23267857-23267986)
chr2 (148-277)||(33380348-33380477)
chr2 (148-281)||(10662024-10662158)
chr2 (148-277)||(35160898-35161029)
chr2 (148-277)||(7475303-7475432)
chr2 (148-277)||(9293370-9293500)
chr2 (152-277)||(3989217-3989342)
chr2 (148-275)||(13354990-13355118)
chr2 (151-277)||(31174633-31174758)
chr2 (148-277)||(43331053-43331182)
chr2 (189-277)||(21936223-21936311)
chr2 (148-252)||(22592876-22592983)
chr2 (148-277)||(9723546-9723677)
chr2 (150-238)||(21393483-21393570)
chr2 (179-252)||(16767288-16767361)
chr2 (148-238)||(34320963-34321042)
chr2 (152-224)||(14941354-14941427)
chr2 (152-224)||(9293564-9293637)
chr2 (152-224)||(10661891-10661964)
chr2 (188-276)||(14941199-14941290)
chr2 (152-224)||(21936085-21936158)
chr2 (152-224)||(23268050-23268123)
chr2 (160-224)||(31174822-31174887)
chr2 (152-224)||(35160761-35160834)
chr2 (148-193)||(39819272-39819317)
chr2 (148-277)||(40262531-40262660)
chr2 (152-224)||(43330916-43330989)
chr2 (169-238)||(37335824-37335894)
chr2 (152-224)||(7475496-7475569)
chr2 (160-224)||(13354858-13354923)
chr2 (152-224)||(21393676-21393749)
chr2 (160-224)||(27847644-27847709)
chr2 (152-224)||(33380211-33380284)
chr2 (178-223)||(37335744-37335789)
chr2 (179-224)||(3989108-3989153)
chr2 (152-224)||(9723409-9723482)
chr2 (160-212)||(22591494-22591547)
[»] chr3 (46 HSPs)
chr3 (148-274)||(34482683-34482809)
chr3 (148-269)||(3137209-3137330)
chr3 (148-281)||(37216848-37216981)
chr3 (148-277)||(37522194-37522323)
chr3 (148-277)||(22426140-22426268)
chr3 (148-277)||(33113934-33114064)
chr3 (148-277)||(3456205-3456334)
chr3 (148-277)||(3574321-3574450)
chr3 (148-277)||(19650695-19650823)
chr3 (148-277)||(30385542-30385670)
chr3 (149-269)||(8320378-8320499)
chr3 (148-252)||(3089585-3089689)
chr3 (148-252)||(6042043-6042147)
chr3 (150-276)||(33145854-33145980)
chr3 (148-277)||(48161046-48161176)
chr3 (148-252)||(2754885-2754989)
chr3 (148-252)||(47738277-47738382)
chr3 (148-276)||(26612891-26613017)
chr3 (150-270)||(42921273-42921394)
chr3 (148-274)||(36864827-36864952)
chr3 (148-252)||(40327997-40328102)
chr3 (148-277)||(41224374-41224504)
chr3 (148-238)||(8361834-8361924)
chr3 (148-277)||(9796824-9796953)
chr3 (160-252)||(33839701-33839794)
chr3 (149-251)||(46919061-46919164)
chr3 (148-277)||(24343688-24343820)
chr3 (148-277)||(42298005-42298122)
chr3 (163-277)||(41883031-41883147)
chr3 (152-224)||(2754721-2754794)
chr3 (152-224)||(3137402-3137475)
chr3 (152-224)||(3574515-3574588)
chr3 (152-224)||(6041888-6041961)
chr3 (160-224)||(9797017-9797082)
chr3 (152-224)||(33145717-33145789)
chr3 (211-277)||(11347409-11347476)
chr3 (179-224)||(8362033-8362078)
chr3 (152-224)||(11347272-11347345)
chr3 (152-224)||(37217041-37217114)
chr3 (160-224)||(47738117-47738182)
chr3 (160-224)||(19650888-19650953)
chr3 (152-224)||(30385015-30385088)
chr3 (152-224)||(34482898-34482971)
chr3 (179-224)||(41883211-41883256)
chr3 (160-224)||(22426332-22426397)
chr3 (160-224)||(26612797-26612862)
[»] chr7 (37 HSPs)
chr7 (148-277)||(48880722-48880851)
chr7 (148-269)||(30848718-30848839)
chr7 (148-269)||(35445546-35445667)
chr7 (148-277)||(3962120-3962248)
chr7 (148-277)||(24395113-24395241)
chr7 (148-277)||(42611952-42612081)
chr7 (148-277)||(45637853-45637981)
chr7 (150-276)||(4974532-4974658)
chr7 (148-269)||(25167651-25167766)
chr7 (148-252)||(15329440-15329544)
chr7 (148-252)||(34483004-34483108)
chr7 (148-252)||(15577642-15577746)
chr7 (148-252)||(35876410-35876514)
chr7 (148-277)||(42696224-42696354)
chr7 (149-277)||(37476876-37477004)
chr7 (157-249)||(29737313-29737406)
chr7 (148-277)||(18037119-18037247)
chr7 (148-238)||(15238564-15238654)
chr7 (150-269)||(20009895-20010014)
chr7 (152-224)||(4974723-4974796)
chr7 (152-224)||(42611815-42611888)
chr7 (152-224)||(45637716-45637789)
chr7 (152-221)||(15577841-15577911)
chr7 (152-224)||(15329277-15329350)
chr7 (152-224)||(34482839-34482912)
chr7 (152-224)||(48880915-48880988)
chr7 (148-277)||(36790271-36790390)
chr7 (179-224)||(15238414-15238459)
chr7 (152-224)||(24394976-24395049)
chr7 (152-224)||(35444562-35444635)
chr7 (152-213)||(37477079-37477141)
chr7 (148-214)||(40880641-40880706)
chr7 (152-224)||(3961983-3962056)
chr7 (160-224)||(18036990-18037055)
chr7 (152-224)||(25167838-25167911)
chr7 (152-224)||(29737143-29737216)
chr7 (152-224)||(36790454-36790527)
[»] scaffold0204 (2 HSPs)
scaffold0204 (148-277)||(4537-4666)
scaffold0204 (152-224)||(4400-4473)
[»] chr6 (36 HSPs)
chr6 (148-277)||(17175816-17175945)
chr6 (148-277)||(32702346-32702475)
chr6 (148-277)||(33696837-33696967)
chr6 (148-269)||(18365369-18365489)
chr6 (148-269)||(18370633-18370753)
chr6 (148-277)||(33695121-33695251)
chr6 (148-269)||(2309218-2309339)
chr6 (148-277)||(28675289-28675418)
chr6 (148-258)||(23290876-23290986)
chr6 (150-277)||(6031537-6031665)
chr6 (148-252)||(17705264-17705367)
chr6 (186-277)||(18889477-18889567)
chr6 (150-269)||(11548386-11548505)
chr6 (189-277)||(6127417-6127506)
chr6 (148-252)||(29693611-29693716)
chr6 (152-224)||(33695315-33695388)
chr6 (152-224)||(33696700-33696773)
chr6 (149-214)||(34238883-34238948)
chr6 (148-226)||(582522-582602)
chr6 (222-277)||(25987071-25987126)
chr6 (152-224)||(6127279-6127352)
chr6 (152-224)||(23291072-23291145)
chr6 (154-224)||(11548576-11548647)
chr6 (152-214)||(25986934-25986997)
chr6 (216-269)||(9752109-9752161)
chr6 (152-224)||(17176009-17176082)
chr6 (152-224)||(17705453-17705526)
chr6 (152-224)||(18365561-18365634)
chr6 (152-224)||(18370825-18370898)
chr6 (152-224)||(28675152-28675225)
chr6 (193-277)||(8515567-8515650)
chr6 (152-224)||(18889685-18889757)
chr6 (148-202)||(2121004-2121059)
chr6 (179-224)||(9752233-9752278)
chr6 (152-214)||(8515723-8515786)
chr6 (160-224)||(32702217-32702282)
[»] scaffold0178 (2 HSPs)
scaffold0178 (148-277)||(11762-11891)
scaffold0178 (152-224)||(11625-11698)
[»] scaffold0471 (2 HSPs)
scaffold0471 (150-277)||(12983-13110)
scaffold0471 (152-224)||(12846-12919)
[»] scaffold0096 (2 HSPs)
scaffold0096 (148-277)||(41152-41280)
scaffold0096 (152-224)||(41015-41088)
[»] scaffold0085 (2 HSPs)
scaffold0085 (148-277)||(47991-48119)
scaffold0085 (152-224)||(47854-47927)
[»] scaffold0665 (2 HSPs)
scaffold0665 (229-281)||(3200-3252)
scaffold0665 (152-224)||(3072-3145)
[»] scaffold0041 (1 HSPs)
scaffold0041 (148-214)||(85577-85642)


Alignment Details
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 17841645 - 17841774
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841645 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 17841744  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  17841745 taaaaaaaagatacataacacccaccaccc 17841774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 26041908 - 26042037
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26041908 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 26042007  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  26042008 taaaaaaaagatacataacacccaccaccc 26042037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 40779924 - 40780053
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40779924 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 40780023  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||| | |||||||    
T  40780024 taaaaaaaagatacataacatccaccaccc 40780053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 14129128 - 14128996
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14129128 gaaaatgctagatatcaagaatgattttataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 14129029  T
Q  249 aaaagaaagatacataacaccgaccaccctatg 281  Q
    |||| ||| |||||||||||| |||||||||||    
T  14129028 aaaaaaaaaatacataacacccaccaccctatg 14128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 3596836 - 3596965
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3596836 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 3596935  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  3596936 taaaaaaaagatacataacacccaccaccc 3596965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 6108028 - 6108157
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6108028 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 6108127  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    |||||  ||||||||||||||| |||||||    
T  6108128 taaaaagaagatacataacacccaccaccc 6108157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 25581034 - 25581163
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25581034 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctttca 25581133  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  25581134 taaaaaaaagatacataacacccaccaccc 25581163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 42754837 - 42754963
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42754837 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 42754936  T
Q  248 taaaagaaagatacataacaccgacca 274  Q
    ||||| ||| |||||||||||| ||||    
T  42754937 taaaaaaaaaatacataacacccacca 42754963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 37985851 - 37985979
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37985851 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttca 37985950  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  37985951 taaaa-aaaaatacataacacccaccaccc 37985979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 150 - 277
Target Start/End: Original strand, 20091598 - 20091725
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  20091598 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 20091697  T
Q  250 aaagaaagatacataacaccgaccaccc 277  Q
    ||| ||| |||||||||||| |||||||    
T  20091698 aaaaaaaaatacataacacccaccaccc 20091725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 32065016 - 32064894
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32065016 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 32064917  T
Q  248 t-aaaagaaagatacataacacc 269  Q
    | |||| ||||||||||||||||    
T  32064916 taaaaaaaaagatacataacacc 32064894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 15187830 - 15187704
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15187830 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 15187731  T
Q  248 taaaagaaagatacataacaccgaccac 275  Q
    ||||| ||| |||||||||||| |||||    
T  15187730 taaaa-aaaaatacataacacccaccac 15187704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 1645759 - 1645889
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1645759 ggaaaatgctagatatcaagaatgattttataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 1645858  T
Q  248 t-aaaagaaagatacataacaccgaccaccc 277  Q
    | |||| ||| |||||||||||| |||||||    
T  1645859 taaaaaaaaaaatacataacacccaccaccc 1645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 34665649 - 34665525
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  34665649 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 34665550  T
Q  250 aaagaaagatacataacaccgaccac 275  Q
    ||| ||| |||||||||||| |||||    
T  34665549 aaa-aaaaatacataacacccaccac 34665525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 10044618 - 10044514
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10044618 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 10044519  T
Q  248 taaaa 252  Q
    |||||    
T  10044518 taaaa 10044514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 160 - 276
Target Start/End: Complemental strand, 35353299 - 35353183
Alignment:
Q  160 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagat 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||||||    
T  35353299 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcataaaaaaaagat 35353200  T
Q  260 acataacaccgaccacc 276  Q
    |||||||||| ||||||    
T  35353199 acataacacccaccacc 35353183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 1503638 - 1503732
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503638 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 1503732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 24211169 - 24211271
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24211169 aaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 24211268  T
Q  250 aaa 252  Q
    |||    
T  24211269 aaa 24211271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 30055786 - 30055657
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||||||    
T  30055786 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctttca 30055687  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||| | |||||||    
T  30055686 taaaaaaaaaatacataacatccaccaccc 30055657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 8454078 - 8453977
Alignment:
Q  173 ttttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgac 272  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  8454078 ttttataagaagaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa-aaagatacataacacccac 8453980  T
Q  273 cac 275  Q
    |||    
T  8453979 cac 8453977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 150 - 277
Target Start/End: Complemental strand, 38017201 - 38017075
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataa-tcacctttagatttcagtctcatttattaatctttcat 248  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||      
T  38017201 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttc-- 38017104  T
Q  249 aaaagaaagatacataacaccgaccaccc 277  Q
    |||| ||| |||||||||||| |||||||    
T  38017103 aaaaaaaaaatacataacacccaccaccc 38017075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 39772608 - 39772723
Alignment:
Q  159 gatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaaga 258  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||| |    
T  39772608 gatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcataaaaaaaaaa 39772707  T
Q  259 tacataacaccgacca 274  Q
    ||||||||||| ||||    
T  39772708 tacataacacccacca 39772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 32394114 - 32393999
Alignment:
Q  160 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagat 259  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  32394114 atatcaagaatgattttataaaaaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaat 32394017  T
Q  260 acataacaccgaccaccc 277  Q
    |||||||||| |||||||    
T  32394016 acataacacctaccaccc 32393999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 31347571 - 31347659
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 236  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31347571 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 37132477 - 37132596
Alignment:
Q  150 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||     
T  37132477 aaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca- 37132575  T
Q  249 aaaagaaagatacataacacc 269  Q
    |||| ||| | ||||||||||    
T  37132576 aaaaaaaaaaaacataacacc 37132596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 7022249 - 7022119
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||| ||||||||   |||||| |||||||||||||| | |||||||||| || ||||||||||||||||||||||   ||||||    
T  7022249 ggaaaatgctagatatcaacaatgatttatcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt--cctttca 7022152  T
Q  248 t---aaaagaaagatacataacaccgaccaccc 277  Q
    |   |||| ||| |||||||||||| |||||||    
T  7022151 taaaaaaaaaaaaatacataacacccaccaccc 7022119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 24844655 - 24844787
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||| ||||||||||| |||||| ||| ||||||| ||||||| |||||||||  |||||||| | ||| | ||||||| |||||    
T  24844655 ggaaaatgttagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttc 24844754  T
Q  247 ataaaagaaagatacataacaccgaccaccctatg 281  Q
    |||||  ||| |||||||||||| |||||||||||    
T  24844755 ataaa--aaaaatacataacacccaccaccctatg 24844787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 3890412 - 3890502
Alignment:
Q  151 aaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 240  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||||||||| |||||||| | ||| |||||||||    
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaa 3890502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 41819594 - 41819667
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 252  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||    
T  41819594 aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcataaaa 41819667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 30834850 - 30834979
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||||||||||||||| |||||| ||| |||||||||||| || ||||| |||| |||||||||||| | |||| | ||  |||     
T  30834850 ggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagtgttatttttcaacttttg 30834949  T
Q  247 ataaaagaaagatacataacaccgaccaccc 277  Q
    |||||| ||| |||||||||||| |||||||    
T  30834950 ataaaataaa-atacataacacccaccaccc 30834979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 7017653 - 7017743
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||||   |||||| ||| |||||||||||   | |||||||| | ||||||||||||||||||||||    
T  7017653 ggaaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt 7017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 32064749 - 32064822
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  32064749 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 34665386 - 34665459
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 27835288 - 27835374
Alignment:
Q  188 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgacca 274  Q
    |||| ||||| ||| ||||||||||| | |||||||||| ||||||||||||| |||| |||||| ||| |||||||||||| ||||    
T  27835288 tcaaaaatgatatgacacaataatcatccttagatttcaatctcatttattaaccttttataaaacaaaaatacataacacccacca 27835374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 17841911 - 17841838
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  17841911 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 20091862 - 20091789
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 31347843 - 31347770
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  31347843 aatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 40780190 - 40780117
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40780190 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 42755095 - 42755030
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 25581299 - 25581227
Alignment:
Q  153 atgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||| |||||||||| | |||||  ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattt 25581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 24844920 - 24844847
Alignment:
Q  151 aaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||| ||||||||    
T  24844920 aaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattt 24844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 7017926 - 7017853
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||| ||| |||||| | |||||||||||||||||||||||||| |||||||| | ||||||||    
T  7017926 aatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 7021990 - 7022055
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 8453838 - 8453911
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattt 8453911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 14128868 - 14128941
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| || |||| || ||||||||||||||| |||||||||| ||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 14128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 15187564 - 15187637
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||| ||| ||||||||    
T  15187564 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 15187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 26042177 - 26042104
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  26042177 aatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 27782178 - 27782105
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||||||  ||||||| |||||| |||||| |||||||||||| |||||||||| ||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 32393862 - 32393935
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 32393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 35353045 - 35353118
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 37986116 - 37986043
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 37986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 30835099 - 30835035
Alignment:
Q  160 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| ||||||||   ||||||||||||||||||||||| |||||||||| || |||||    
T  30835099 atatcaagaaagattttatcgaaaaaattcaagaatgacatggcagaataatcaccctttgattt 30835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 38016983 - 38017039
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacc 215  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacc 38017039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 3890649 - 3890611
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctt 217  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  3890649 aagaaaaattcaagaatgacatggcagaataatcacctt 3890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 6108286 - 6108221
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  6108286 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattt 6108221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 27835514 - 27835441
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||| || ||| |||| |||||||||||||||||||||||| | |||||||| | ||||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattt 27835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 39772854 - 39772789
Alignment:
Q  160 atatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||||||  ||||||| | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  39772854 atatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 210  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||| |||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 37132719 - 37132657
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatca 213  Q
    ||||||| ||||||| ||  ||||||| |||||||||| ||||||||||||||| ||||||||    
T  37132719 aatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatca 37132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 3817963 - 3817918
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||||||||||||| ||||| || |||||||||| ||||||||    
T  3817963 aagaaaaattcaagaattacatgacagaataatcacccttagattt 3817918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 33584124 - 33584253
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33584124 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33584223  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  33584224 taaaaaaaagatacataacacccaccaccc 33584253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 25398508 - 25398379
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398508 ggaaaatgctagatatcaagaatgattttataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 25398409  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  25398408 taaaaaaaagatacataacacccaccaccc 25398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 3521802 - 3521930
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3521802 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3521901  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  3521902 taaaa-aaagatacataacacccaccaccc 3521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 4892472 - 4892343
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4892472 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 4892373  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    | |||  ||||||||||||||| |||||||    
T  4892372 ttaaaagaagatacataacacccaccaccc 4892343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 8145643 - 8145515
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145643 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 8145544  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  8145543 taaaa-aaaaatacataacacccaccaccc 8145515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 6043307 - 6043427
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6043307 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 6043406  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||| ||||||||||||    
T  6043407 taaaa-aaaaatacataacacc 6043427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 37321588 - 37321717
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321588 ggaaaatgctagatatcaagaatgattttataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttca 37321687  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||  ||| |||||||||||| |||||||    
T  37321688 taaataaaaaatacataacacccaccaccc 37321717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 12851069 - 12850942
Alignment:
Q  151 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataa 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12851069 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataa 12850970  T
Q  251 aaga-aagatacataacaccgaccaccc 277  Q
    || | || |||||||||||| |||||||    
T  12850969 aaaagaaaatacataacacccaccaccc 12850942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 38899520 - 38899650
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38899520 ggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 38899619  T
Q  247 ataaaagaaagatacataacaccgaccaccc 277  Q
    |||||| ||||||| |||||||| |||||||    
T  38899620 ataaaaaaaagatatataacacccaccaccc 38899650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 149 - 277
Target Start/End: Complemental strand, 3363048 - 3362919
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3363048 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcat 3362949  T
Q  249 -aaaagaaagatacataacaccgaccaccc 277  Q
     |||| |||||||||||||||| |||||||    
T  3362948 aaaaaaaaagatacataacacccaccaccc 3362919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 14138937 - 14138809
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14138937 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 14138838  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  14138837 taaaa-aaaaatacataacacccaccaccc 14138809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 2477906 - 2477777
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2477906 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttca 2477807  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  2477806 taaaaaaaaaatacataacacccaccaccc 2477777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 12614532 - 12614637
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||||||||||||||| |||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12614532 ggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttc 12614631  T
Q  247 ataaaa 252  Q
    ||||||    
T  12614632 ataaaa 12614637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 11360947 - 11361055
Alignment:
Q  169 atgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacac 268  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| || ||| |||||||||||    
T  11360947 atgattttataagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaatacataacac 11361046  T
Q  269 cgaccaccc 277  Q
    | |||||||    
T  11361047 ccaccaccc 11361055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 22912852 - 22912978
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||    
T  22912852 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--tctctca 22912949  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||| | |||||||    
T  22912950 taaaa-aaaaatacataacatccaccaccc 22912978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 4433845 - 4433928
Alignment:
Q  190 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgacca 274  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||    
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaa-aaaaatacataacacccacca 4433928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 17545477 - 17545567
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  17545477 ggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 17545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 27482077 - 27481963
Alignment:
Q  165 aagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttaga-tttcagtctcatttattaatctttcataaaagaaagataca 262  Q
    |||||||||||||| | |||| |||||||||||||||  || |||||||||||||||| ||| | ||| ||||||||| |||| |||||| ||| |||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttttataaaaaaaaaataca 27481978  T
Q  263 taacaccgaccaccc 277  Q
    ||||||| |||||||    
T  27481977 taacacccaccaccc 27481963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 22913115 - 22913042
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 13664791 - 13664709
Alignment:
Q  186 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacacc 269  Q
    ||||||||||||||||  | |||||||||| |||||||||||||| |||||||||| ||| |||||| ||| ||||||||||||    
T  13664791 attcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaatgttttataaaa-aaaaatacataacacc 13664709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 31640767 - 31640864
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 277  Q
    |||||| ||||||||||||||||||| |||||||  |||||||||    ||| ||||||||| ||||||||||| ||| |||||||||||| |||||||    
T  31640767 aagaaagattcaagaatgacatggcagaataatcgactttagattgatatcttatttattaacctttcataaaa-aaaaatacataacacccaccaccc 31640864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 2477640 - 2477713
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  2477640 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 6043572 - 6043499
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||||| ||||||||    
T  6043572 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 8145387 - 8145452
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 11361192 - 11361119
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 10458409 - 10458469
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcaccttta 219  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcaccttta 10458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 3362782 - 3362855
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  3362782 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 3362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 4434068 - 4433995
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattt 4433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 4892206 - 4892279
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  4892206 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 12614794 - 12614721
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||||| ||||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 17545718 - 17545673
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  17545718 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 25398242 - 25398315
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 25398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 38899787 - 38899714
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  38899787 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 38899714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 3522059 - 3521994
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||| | ||||||| ||||| |||||||||||| |||||||||| ||||||||    
T  3522059 atatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatcaccattagattt 3521994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 12850805 - 12850878
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| | ||| |||||||||||| ||||| |||| ||||||||    
T  12850805 aatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattt 12850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 33584390 - 33584317
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 33584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 37321855 - 37321781
Alignment:
Q  152 aatgctagatatc-aagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  37321855 aatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37321781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 31640973 - 31640928
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||| ||||||||||||||||||| ||||| |||| ||||||||    
T  31640973 aagaaagattcaagaatgacatggcagaataaccacccttagattt 31640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 12614511 - 12614483
Alignment:
Q  150 aaaatgctagatatcaagaatgattttat 178  Q
    |||||||||||||||||||||||||||||    
T  12614511 aaaatgctagatatcaagaatgattttat 12614483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 36880148 - 36880217
Alignment:
Q  188 tcaagaatgacatggcacaata----atcacctttagattt-cagtctcatttattaatctttcataaaa 252  Q
    |||||||||||||| |||||||    |||||| |||||||| ||||||||| |||||| |||||||||||    
T  36880148 tcaagaatgacatgacacaatatataatcacccttagattttcagtctcatctattaacctttcataaaa 36880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 46442114 - 46441985
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46442114 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 46442015  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  46442014 taaaaaaaagatacataacacccaccaccc 46441985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 36073619 - 36073491
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073619 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 36073520  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  36073519 taaaa-aaagatacataacacccaccaccc 36073491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 44893008 - 44893134
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893008 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 44893107  T
Q  248 taaaagaaagatacataacaccgacca 274  Q
    ||||| |||||||||||||||| ||||    
T  44893108 taaaaaaaagatacataacacccacca 44893134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 148 - 274
Target Start/End: Complemental strand, 44893696 - 44893570
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893696 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 44893597  T
Q  248 taaaagaaagatacataacaccgacca 274  Q
    ||||| |||||||||||||||| ||||    
T  44893596 taaaaaaaagatacataacacccacca 44893570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 47290336 - 47290207
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  47290336 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattctttca 47290237  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  47290236 taaaaaaaagatacataacacccaccaccc 47290207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 53123301 - 53123172
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53123301 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttca 53123202  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    || || |||||||||||||||| |||||||    
T  53123201 tacaaaaaagatacataacacccaccaccc 53123172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 150 - 277
Target Start/End: Complemental strand, 9089138 - 9089011
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9089138 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcata 9089039  T
Q  250 aaagaaagatacataacaccgaccaccc 277  Q
     || |||||||||||||||| |||||||    
T  9089038 caaaaaagatacataacacccaccaccc 9089011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 22199529 - 22199401
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22199529 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 22199430  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  22199429 taaaa-aaaaatacataacacccaccaccc 22199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 31078614 - 31078735
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31078614 ggaaaatgctagatatcaagaatgattttataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttca 31078713  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||||||||||||||||    
T  31078714 taaaaaaaagatacataacacc 31078735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 150 - 277
Target Start/End: Complemental strand, 24128507 - 24128380
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  24128507 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 24128408  T
Q  250 aaagaaagatacataacaccgaccaccc 277  Q
    ||| |||||||||||||| | |||||||    
T  24128407 aaaaaaagatacataacatccaccaccc 24128380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 49387682 - 49387812
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387682 ggaaaatgttagatatcaaggatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 49387781  T
Q  248 t-aaaagaaagatacataacaccgaccaccc 277  Q
    | |||| |||||||||||||| | |||||||    
T  49387782 taaaaaaaaagatacataacatccaccaccc 49387812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 50156374 - 50156502
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  50156374 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatgacataataatcacc-ttagatttcagtctcatttattaatctttca 50156472  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  50156473 taaaaaaaagatacataacacccaccaccc 50156502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 21802115 - 21802242
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  21802115 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttca 21802214  T
Q  248 taaaagaaagatacataacaccgaccacc 276  Q
    ||||| ||| |||||||||||| ||||||    
T  21802215 taaaa-aaaaatacataacacccaccacc 21802242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 36073221 - 36073088
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36073221 ggaaaatgctagatatcaaaaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttca 36073122  T
Q  248 t----aaaagaaagatacataacaccgaccaccc 277  Q
    |    |||| |||||||||||||||| |||||||    
T  36073121 taaaaaaaaaaaagatacataacacccaccaccc 36073088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 2625107 - 2624980
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2625107 ggaaaatgttagatatcaagaatgattttataagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 2625008  T
Q  248 taaaagaaagatacataacaccgaccac 275  Q
    ||||| ||| |||||||||||| |||||    
T  2625007 taaaaaaaaaatacataacacccaccac 2624980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 4751717 - 4751587
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4751717 ggaaaatgctagatatcaagaataattttataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttca 4751618  T
Q  248 taaaaga-aagatacataacaccgaccaccc 277  Q
    ||||| | || |||||||||||| |||||||    
T  4751617 taaaaaagaaaatacataacacccaccaccc 4751587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 7744907 - 7745036
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  7744907 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaatatttca 7745006  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  7745007 taaaaaaaaaatacataacacccaccaccc 7745036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 10442582 - 10442713
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcattta-ttaatctttc 246  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10442582 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatttaatctttc 10442681  T
Q  247 -ataaaagaaagatacataacaccgaccaccc 277  Q
     | |||| ||| | |||||||||| |||||||    
T  10442682 aaaaaaaaaaaaaaacataacacccaccaccc 10442713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 33530479 - 33530583
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33530479 ggaaaatgctagatatcaagaatgattttataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 33530578  T
Q  248 taaaa 252  Q
    |||||    
T  33530579 taaaa 33530583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 23964269 - 23964388
Alignment:
Q  158 agatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaa 256  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||| |||    
T  23964269 agatatcaagaatgattttataagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaa 23964368  T
Q  257 gatacataacaccgaccacc 276  Q
     |||||||||||| ||||||    
T  23964369 aatacataacacccaccacc 23964388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 269
Target Start/End: Complemental strand, 17655699 - 17655579
Alignment:
Q  150 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||| || |||||| |||||||||||||||||||||||||||| |||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T
Q  249 aaaagaaagatacataacacc 269  Q
    |||| ||| | | ||||||||    
T  17655599 aaaaaaaatacatataacacc 17655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 30563448 - 30563350
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 277  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| ||||||||||| ||| |||||||||||| |||||||    
T  30563448 aagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataacacccaccaccc 30563350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 37219902 - 37219797
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||| | |||||||||| ||| ||||||||| |||||    
T  37219902 ggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttc 37219803  T
Q  247 ataaaa 252  Q
    ||||||    
T  37219802 ataaaa 37219797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 11314046 - 11314144
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 245  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||| |||||||  ||||| ||||||||| ||||    
T  11314046 ggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 24392942 - 24392854
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||   |||||| ||| ||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  24392942 aaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttatt 24392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 37934736 - 37934855
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| ||||||| | || ||||||||| |||||| |||||| ||||| ||| ||||||||||||| |||||||||| ||||||||||||| |||||    
T  37934736 ggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttc 37934835  T
Q  247 ataaaagaaagatacataaca 267  Q
    |||||| ||| ||||||||||    
T  37934836 ataaaa-aaaaatacataaca 37934855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 42671939 - 42671834
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||| || ||||||||   |||||||| |||||||||| |||| |||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T
Q  247 ataaaa 252  Q
     |||||    
T  42671839 gtaaaa 42671834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 31726706 - 31726655
Alignment:
Q  29 atgcctgtcctacttgagtttttatttaccaaaatgtcctagtttcatctag 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31726706 atgcctgtcctacttgagtttttatttaccaaaatgtcctagtttcatctag 31726655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 33530749 - 33530676
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  33530749 aatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 25063369 - 25063436
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 214  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  25063369 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcac 25063436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 10442850 - 10442777
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  10442850 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 31078880 - 31078807
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  31078880 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 49387949 - 49387876
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 44744698 - 44744571
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    ||||||| |||||||||| ||||||||||| |   | |||||||||||||||| | ||||||| | | |||||||||||||| ||||||||| || | |     
T  44744698 gaaaatgttagatatcaaaaatgattttatca---agattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacctat-ac 44744603  T
Q  249 aaaagaaagatacataacaccgaccaccctatg 281  Q
    |||| ||| |||||||||||| |||||||||||    
T  44744602 aaaa-aaaaatacataacacccaccaccctatg 44744571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 2624841 - 2624914
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 7745173 - 7745100
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 21802383 - 21802310
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  21802383 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 22199265 - 22199338
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 24392671 - 24392744
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  24392671 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 36072951 - 36073024
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||||| |||| ||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 46441848 - 46441921
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 47290070 - 47290143
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  47290070 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 53123034 - 53123108
Alignment:
Q  152 aatgctagatatcaagaatgattttat--aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| |  ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  53123034 aatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 4751450 - 4751523
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  4751450 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 4751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 24128243 - 24128316
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  24128243 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 24128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 36073256 - 36073349
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 240  Q
    |||||||||||||||  || ||||||||||| |||||| ||| |||||||| ||| || |||||| ||  |||||||||||||| |||||||||    
T  36073256 ggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 36073354 - 36073427
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||| ||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattt 36073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 44893430 - 44893503
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  44893430 aatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 31726631 - 31726596
Alignment:
Q  105 agtgctatgtcacgccaaaccaaatggtgtgacatc 140  Q
    ||||||||||||||||||||||||||||||||||||    
T  31726631 agtgctatgtcacgccaaaccaaatggtgtgacatc 31726596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 42671675 - 42671746
Alignment:
Q  154 tgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||| ||||||| || |||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattt 42671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 17655461 - 17655507
Alignment:
Q  178 taagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||    
T  17655461 taagaaaatttcaagaatgacatggcagaataatcacccttagattt 17655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 9088902 - 9088947
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  9088902 aagaaaatttcaagaatgacatggcagaataatcacccttagattt 9088947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 23964518 - 23964453
Alignment:
Q  160 atatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 23964453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 50156639 - 50156566
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||| ||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  50156639 aatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 50156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 36073795 - 36073731
Alignment:
Q  161 tatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||||| |||||||| |||||| ||| |||||||||||| || ||||||||| |||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 44893275 - 44893201
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaa--ttcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||| ||||| |||||| | | |||||  |||||||||||||||||| |||||||||| ||||||||    
T  44893275 aatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 37935002 - 37934929
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaat-tcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||| || |||||||| | |||||| ||||||||||||||| | |||| ||||| ||||||||    
T  37935002 aatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaatactcacccttagattt 37934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 51737775 - 51737646
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737775 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 51737676  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  51737675 taaaaaaaagatacataacacccaccaccc 51737646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 36966503 - 36966632
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36966503 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttca 36966602  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  36966603 taaaaaaaagatacataacacccaccaccc 36966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 41876237 - 41876366
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41876237 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 41876336  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  41876337 taaaaaaaagatacataacacccaccaccc 41876366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 6883757 - 6883628
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  6883757 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttca 6883658  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  6883657 taaaaaaaagatacataacacccaccaccc 6883628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 19015674 - 19015545
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19015674 ggaaaatgctacatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 19015575  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    || || |||||||||||||||| |||||||    
T  19015574 tacaaaaaagatacataacacccaccaccc 19015545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 37821629 - 37821750
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37821629 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 37821728  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||||||||||||||||    
T  37821729 taaaaaaaagatacataacacc 37821750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 149 - 277
Target Start/End: Complemental strand, 40215257 - 40215129
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40215257 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatatttcat 40215158  T
Q  249 aaaagaaagatacataacaccgaccaccc 277  Q
    |||| ||| |||||||||||| |||||||    
T  40215157 aaaaaaaaaatacataacacccaccaccc 40215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 25463946 - 25463817
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25463946 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttca 25463847  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  25463846 taaaaaaaaaatacataacacccaccaccc 25463817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 25973677 - 25973550
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25973677 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttca 25973578  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||  ||| |||||||||||| |||||||    
T  25973577 taaa--aaaaatacataacacccaccaccc 25973550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 20304925 - 20305052
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20304925 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttca 20305024  T
Q  248 t-aaaagaaagatacataacaccgacca 274  Q
    | |||| ||| |||||||||||| ||||    
T  20305025 taaaaaaaaaaatacataacacccacca 20305052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 44094967 - 44094839
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44094967 ggaaaatgctagatatcaagaattattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 44094868  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    | ||||||| |||||||||||| |||||||    
T  44094867 t-aaagaaaaatacataacacccaccaccc 44094839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 9910086 - 9910217
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  9910086 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttca 9910185  T
Q  248 t--aaaagaaagatacataacaccgaccaccc 277  Q
    |  |||| |||||| ||||||||| |||||||    
T  9910186 taaaaaaaaaagatgcataacacccaccaccc 9910217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 18404718 - 18404614
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18404718 ggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttca 18404619  T
Q  248 taaaa 252  Q
    |||||    
T  18404618 taaaa 18404614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 3559887 - 3559758
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  3559887 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttca 3559788  T
Q  248 taaaagaaagataca-taacaccgaccaccc 277  Q
    ||||| ||| ||||| ||||||| |||||||    
T  3559787 taaaa-aaaaatacattaacacccaccaccc 3559758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 32000061 - 32000191
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||||    
T  32000061 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattca--tttca 32000158  T
Q  248 taaaa---gaaagatacataacaccgaccaccc 277  Q
    |||||    ||| |||||||||||| |||||||    
T  32000159 taaaaaataaaaaatacataacacccaccaccc 32000191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 33786426 - 33786516
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33786426 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 33786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 40273976 - 40273888
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40273976 aaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 19722894 - 19722970
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  19722894 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 44690818 - 44690921
Alignment:
Q  150 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||||| ||    
T  44690818 aaaatgttagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttttat 44690917  T
Q  249 aaaa 252  Q
    ||||    
T  44690918 aaaa 44690921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 10167670 - 10167565
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| || |||| |||||||||||||||| |||| ||| |||||| | |||  ||||||||||||||||||||||||||| |||||||||| ||||    
T  10167670 ggaaaatgttacatattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaatttttc 10167571  T
Q  247 ataaaa 252  Q
    ||||||    
T  10167570 ataaaa 10167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 33786696 - 33786623
Alignment:
Q  151 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| ||||    
T  33786696 aaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 22157333 - 22157459
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||| ||||| ||  || ||   ||| ||||||||||||| | |||||||||  ||| |||||| ||| |||||||||  |||||    
T  22157333 ggaaaatgctagatatcaaaaatgaattcttatgatggatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaacatttca 22157432  T
Q  248 taaaagaaagatacataacaccgacca 274  Q
    ||||||||| |||||||||||| ||||    
T  22157433 taaaagaaaaatacataacacctacca 22157459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 27523050 - 27523171
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| || ||||||||||||||||||| |||||| ||||||||||   |||||| | |||||||| || ||||| ||||| |||||||||  ||||    
T  27523050 ggaaaatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttc 27523149  T
Q  247 ataaaagaaagatacataacacc 269  Q
    |||||| ||| ||||||||||||    
T  27523150 ataaaa-aaaaatacataacacc 27523171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 16045859 - 16045786
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 40214992 - 40215065
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 40273706 - 40273779
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||| || |||||||||| ||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 18404446 - 18404519
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||| | |||||||||||||||||||    
T  18404446 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 25463680 - 25463753
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  25463680 aatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 44094702 - 44094775
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 52064373 - 52064445
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttag 220  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||||||| || |||| ||||| ||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 52329507 - 52329441
Alignment:
Q  186 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 252  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||| | |||||||  ||||||||||    
T  52329507 attcaagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcataaaa 52329441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 6883491 - 6883564
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 9910354 - 9910281
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattt 9910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 19015408 - 19015481
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  19015408 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 19015481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 32000328 - 32000255
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||||||||||||||||||| || ||||| |||| ||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattt 32000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 36966769 - 36966696
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 36966696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 37821895 - 37821822
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 37821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 3559621 - 3559694
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||| ||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattt 3559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 41876503 - 41876434
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttag 220  Q
    ||||||| |||||||||| |||||| | | |||||||  ||||||||||||||| |||||||||| ||||    
T  41876503 aatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttag 41876434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 119; Significance: 8e-61; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 148 - 274
Target Start/End: Complemental strand, 26206 - 26080
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26206 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 26107  T
Q  248 taaaagaaagatacataacaccgacca 274  Q
    ||||| |||||||||||||||| ||||    
T  26106 taaaaaaaagatacataacacccacca 26080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 148 - 274
Target Start/End: Complemental strand, 16254 - 16128
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16254 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttca 16155  T
Q  248 taaaagaaagatacataacaccgacca 274  Q
    ||||| |||||||||||||||| ||||    
T  16154 taaaaaaaagatacataacacccacca 16128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 8605 - 8546
Alignment:
Q  215 ctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgacca 274  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  8605 ctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccacca 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 8414 - 8479
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 15996 - 16061
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 25948 - 26013
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 23267857 - 23267986
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23267857 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 23267956  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  23267957 taaaaaaaagatacataacacccaccaccc 23267986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 33380477 - 33380348
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33380477 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33380378  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    | ||| |||||||||||||||| |||||||    
T  33380377 ttaaaaaaagatacataacacccaccaccc 33380348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 10662158 - 10662024
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10662158 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 10662059  T
Q  248 t-aaaagaaagatacataacaccgaccaccctatg 281  Q
    | |||| |||||||||||||||| |||||||||||    
T  10662058 taaaaaaaaagatacataacacccaccaccctatg 10662024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 35161029 - 35160898
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35161029 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35160930  T
Q  248 t--aaaagaaagatacataacaccgaccaccc 277  Q
    |  |||| |||||||||||||||| |||||||    
T  35160929 taaaaaaaaaagatacataacacccaccaccc 35160898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 7475303 - 7475432
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  7475303 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctttca 7475402  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  7475403 taaaaaaaagatacataacacccaccaccc 7475432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 9293370 - 9293500
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  9293370 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttca 9293469  T
Q  248 t-aaaagaaagatacataacaccgaccaccc 277  Q
    | |||| ||| |||||||||||| |||||||    
T  9293470 taaaaaaaaaaatacataacacccaccaccc 9293500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 3989342 - 3989217
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaa 251  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3989342 aatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataaa 3989243  T
Q  252 agaaagatacataacaccgaccaccc 277  Q
    | ||| |||||||||||| |||||||    
T  3989242 aaaaaaatacataacacccaccaccc 3989217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 13355118 - 13354990
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13355118 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttca 13355019  T
Q  248 t-aaaagaaagatacataacaccgaccac 275  Q
    | |||| ||| |||||||||||| |||||    
T  13355018 taaaaaaaaaaatacataacacccaccac 13354990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 31174633 - 31174758
Alignment:
Q  151 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataa 250  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||    
T  31174633 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcataa 31174732  T
Q  251 aagaaagatacataacaccgaccaccc 277  Q
    || ||| |||||||||||| |||||||    
T  31174733 aa-aaaaatacataacacccaccaccc 31174758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 43331182 - 43331053
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||   |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||   |    
T  43331182 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattcctctcata 43331083  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
     |||| ||| |||||||||||| |||||||    
T  43331082 aaaaaaaaaaatacataacacccaccaccc 43331053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 21936311 - 21936223
Alignment:
Q  189 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 277  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  21936311 caagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaatacataacacccaccaccc 21936223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 22592983 - 22592876
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaga--tttcagtctcatttattaatctt 244  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||  ||||||||| ||||||||| |||    
T  22592983 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctt 22592884  T
Q  245 tcataaaa 252  Q
    ||||||||    
T  22592883 tcataaaa 22592876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 9723677 - 9723546
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| ||||||||||||||||||| || |||||| ||| |||||||||||| || ||||||||||||||||||||||||| ||||||| |  ||||    
T  9723677 ggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttttc 9723578  T
Q  247 at-aaaagaaagatacataacaccgaccaccc 277  Q
    || |||| ||| |||||||||||| |||||||    
T  9723577 ataaaaaaaaaaatacataacacccaccaccc 9723546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 21393483 - 21393570
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||   ||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  21393483 aaaatgctagatatcaagaatgatttatcaagaaaa-ttcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt 21393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 16767288 - 16767361
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 252  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  16767288 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcataaaa 16767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 34320963 - 34321042
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34320963 ggaaaatgctagatatcaagaatgatttt-----------tcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 14941427 - 14941354
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  14941427 aatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 9293637 - 9293564
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  9293637 aatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 10661891 - 10661964
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 14941199 - 14941290
Alignment:
Q  188 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataa---aagaaagatacataacaccgaccacc 276  Q
    |||||||||||||| ||||||||||| | |||||||||| ||| ||||||||| |||||||||   || ||| |||||||||||| ||||||    
T  14941199 tcaagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacc 14941290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 21936085 - 21936158
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 23268123 - 23268050
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  23268123 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 31174887 - 31174822
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  31174887 atatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 35160761 - 35160834
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  35160761 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 39819317 - 39819272
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaaga 193  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39819317 ggaaaatgttagatatcaagaatgattttataagaaaaattcaaga 39819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 40262531 - 40262660
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||  |||  | ||   ||||||||||||||||| | |||||| ||  |||||||||||| | |||| ||||  |||||    
T  40262531 ggaaaatgctagatatcaagaatggattttcacgatggattcaagaatgacatggtagaataataactcttagatttcagttttatttgttaacgtttca 40262630  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| | | |||||||||||| |||||||    
T  40262631 taaaaaataaatacataacacccaccaccc 40262660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 43330916 - 43330989
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | || ||||||||||||||||||||||| |||||||||| ||||||||    
T  43330916 aatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  169 atgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    |||||||||| |||||| ||| || ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 7475569 - 7475496
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||  | |||||||||| ||||||||    
T  7475569 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattt 7475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 13354858 - 13354923
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||| ||| ||||||||    
T  13354858 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 13354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 21393749 - 21393676
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| ||||||||||  ||||| | |||||||||| ||||||||||||| | |||||||||| ||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattt 21393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 27847644 - 27847709
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||| ||||| |||||||| |||||| |||||||||||||||| || |||||||||| ||||||||    
T  27847644 atataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 33380211 - 33380284
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||  |||||||||| ||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattt 33380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 37335744 - 37335789
Alignment:
Q  178 taagaaaaattcaagaatgacatggcacaataatcacctttagatt 223  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  37335744 taagaaagattcaagaatgacatggcagaataatcacttttagatt 37335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 3989108 - 3989153
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  3989108 aagaaaattttaagaatgacatggcagaataatcacccttagattt 3989153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 9723409 - 9723482
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||| ||||| |||||||| |||||| ||| |||||||||||| || |||||||||| ||| ||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 212  Q
    |||||||||| |||||||| || |||||||||||||||| |||||| |||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 34482683 - 34482809
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482683 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 34482782  T
Q  248 taaaagaaagatacataacaccgacca 274  Q
    ||||| |||||||||||| ||| ||||    
T  34482783 taaaaaaaagatacataatacccacca 34482809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 3137209 - 3137330
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137209 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3137308  T
Q  248 taaaagaaagatacataacacc 269  Q
    || || ||||||||||||||||    
T  3137309 tacaaaaaagatacataacacc 3137330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 37216848 - 37216981
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37216848 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 37216947  T
Q  248 taaaagaaagatacataacaccgaccaccctatg 281  Q
    ||||| ||| |||||||||||| |||||||||||    
T  37216948 taaaaaaaaaatacataacacccaccaccctatg 37216981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 37522323 - 37522194
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37522323 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttca 37522224  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  37522223 taaaaaaaagatacataacacccaccaccc 37522194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 22426140 - 22426268
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22426140 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttca 22426239  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  22426240 taaaa-aaaaatacataacacccaccaccc 22426268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 33114064 - 33113934
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33114064 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 33113965  T
Q  248 t-aaaagaaagatacataacaccgaccaccc 277  Q
    | |||| ||| |||||||||||| |||||||    
T  33113964 taaaaaaaaaaatacataacacccaccaccc 33113934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 3456334 - 3456205
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  3456334 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatctttca 3456235  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  3456234 taaaaaaaaaatacataacacccaccaccc 3456205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 3574321 - 3574450
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  3574321 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttca 3574420  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  3574421 taaaaaaaaaatacataacacccaccaccc 3574450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 19650695 - 19650823
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19650695 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 19650794  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  19650795 taaaa-aaaaatacataacacccaccaccc 19650823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 30385670 - 30385542
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385670 ggaaaatgctaaatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 30385571  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| | | |||||||||||| |||||||    
T  30385570 taaaa-ataaatacataacacccaccaccc 30385542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 8320378 - 8320499
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8320378 gaaaatgctagatatcaataatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8320477  T
Q  249 -aaaagaaagatacataacacc 269  Q
     |||| ||| ||||||||||||    
T  8320478 aaaaaaaaaaatacataacacc 8320499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 3089689 - 3089585
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3089689 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3089590  T
Q  248 taaaa 252  Q
    |||||    
T  3089589 taaaa 3089585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 6042147 - 6042043
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6042147 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatttttca 6042048  T
Q  248 taaaa 252  Q
    |||||    
T  6042047 taaaa 6042043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 150 - 276
Target Start/End: Complemental strand, 33145980 - 33145854
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  33145980 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcata 33145881  T
Q  250 aaagaaagatacataacaccgaccacc 276  Q
    ||| ||| ||||||| |||| ||||||    
T  33145880 aaaaaaaaatacataccacccaccacc 33145854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 48161176 - 48161046
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  48161176 ggaaaatgctagatatcaagaatgattttataagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaatttttca 48161077  T
Q  248 t-aaaagaaagatacataacaccgaccaccc 277  Q
    | |||| ||| |||||||||||| |||||||    
T  48161076 taaaaaaaaaaatacataacacccaccaccc 48161046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 2754989 - 2754885
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2754989 ggaaaatgctagatatcaagaatcattttataagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 2754890  T
Q  248 taaaa 252  Q
    |||||    
T  2754889 taaaa 2754885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 47738382 - 47738277
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  47738382 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctttc 47738283  T
Q  247 ataaaa 252  Q
    ||||||    
T  47738282 ataaaa 47738277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 148 - 276
Target Start/End: Complemental strand, 26613017 - 26612891
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  26613017 ggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctttc 26612918  T
Q  247 ataaaagaaagatacataacaccgaccacc 276  Q
    ||||   ||| |||||||||||| ||||||    
T  26612917 ataa---aaaaatacataacacccaccacc 26612891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 42921394 - 42921273
Alignment:
Q  150 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||    
T  42921394 aaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T
Q  249 aaaagaaagatacataacaccg 270  Q
    |||| ||| |||||||| ||||    
T  42921294 aaaaaaaaaatacataataccg 42921273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 36864827 - 36864952
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    ||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||    
T  36864827 ggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttc 36864926  T
Q  247 ataaaagaaagatacataacaccgacca 274  Q
    ||| |  ||| |||||||||||| ||||    
T  36864927 atata--aaaaatacataacacccacca 36864952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 40328102 - 40327997
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||| | ||||     
T  40328102 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttacctttg 40328003  T
Q  247 ataaaa 252  Q
    ||||||    
T  40328002 ataaaa 40327997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 41224504 - 41224374
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||||    
T  41224504 ggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatt--tctttca 41224407  T
Q  248 t---aaaagaaagatacataacaccgaccaccc 277  Q
    |   |||| ||| |||||||||||| |||||||    
T  41224406 taaaaaaaaaaaaatacataacacccaccaccc 41224374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 8361834 - 8361924
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8361834 ggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttatt 8361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 9796824 - 9796953
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||   ||||||    
T  9796824 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt--cctttca 9796921  T
Q  248 t--aaaagaaagatacataacaccgaccaccc 277  Q
    |  |||||||| |||||||| ||| |||||||    
T  9796922 taaaaaagaaaaatacataagacccaccaccc 9796953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 33839794 - 33839701
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa 252  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcataaaa 33839701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 46919164 - 46919061
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||| |||||||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||| |||||||| |||| |||||||||||| |||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaatctatca 46919065  T
Q  248 taaa 251  Q
    ||||    
T  46919064 taaa 46919061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 24343820 - 24343688
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||||||||||||||| | |||| ||||||||||||||||  |  ||||||||| |||||||||||||| ||||||||| |||||    
T  24343820 ggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctttc 24343721  T
Q  247 --ataaaagaaagatacataacaccgaccaccc 277  Q
      | |||| ||| |||||||||||| |||||||    
T  24343720 aaaaaaaaaaaaaatacataacacccaccaccc 24343688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 42298122 - 42298005
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||| |||||||||||||||||||          ||||||||||||| |||||||| |||| |||||||||||||||||||||||| ||||||    
T  42298122 ggaaaatgctaaatatcaagaatgattttat----------caagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttca 42298033  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||  ||| |||||||||| | |||||||    
T  42298032 taaa--aaaaatacataacatctaccaccc 42298005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 41883031 - 41883147
Alignment:
Q  163 tcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaagata 260  Q
    |||| ||||||||||| |||||| ||||||||||||||||| | |||||||| |||| ||||||||||| |||||| || |||| || |||| ||| |||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttttataaaaaaaaaaata 41883130  T
Q  261 cataacaccgaccaccc 277  Q
    ||||||||| |||||||    
T  41883131 cataacacccaccaccc 41883147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 2754721 - 2754794
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  2754721 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 3137475 - 3137402
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  3137475 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 3574588 - 3574515
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  3574588 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 6041888 - 6041961
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 9797082 - 9797017
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 33145717 - 33145789
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| | |||| || ||||||||||||||| |||||||||| ||||||||    
T  33145717 aatgctatatatcaagaaagattttattaaaaaattttaagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 11347476 - 11347409
Alignment:
Q  211 tcacctttagatttcagtctcatttattaatctttcat-aaaagaaagatacataacaccgaccaccc 277  Q
    |||||||||||||||| |||||||||||||| |||||| |||| ||| |||||||||||| |||||||    
T  11347476 tcacctttagatttcaatctcatttattaatttttcataaaaaaaaaaatacataacacccaccaccc 11347409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 8362078 - 8362033
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  8362078 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 11347272 - 11347345
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||| ||| ||||||||    
T  11347272 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattt 11347345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 37217114 - 37217041
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 47738117 - 47738182
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattt 47738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 19650953 - 19650888
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  19650953 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattt 19650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 30385015 - 30385088
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||  ||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||||| ||| ||||    
T  30385015 aatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattt 30385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 34482971 - 34482898
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||| | |||||||||| ||||||||    
T  34482971 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattt 34482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 41883256 - 41883211
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  41883256 aagaaaaattcaagaatgacatggcagaataatcacccttaaattt 41883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 22426397 - 22426332
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||| ||||| |||||||| ||||||| || || |||||||||||| |||||||||| ||||||||    
T  22426397 atattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagattt 22426332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 26612797 - 26612862
Alignment:
Q  160 atatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| || |||||||||| |||| ||||||||||||||||||| ||||| ||  |||||||||    
T  26612797 atatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataaccatttttagattt 26612862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 7e-58; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 48880722 - 48880851
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  48880722 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttca 48880821  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||||||| |||||||    
T  48880822 taaaaaaaagatacataacacccaccaccc 48880851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 30848839 - 30848718
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30848839 ggaaaatgctagatatcaagaatgcttttataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 30848740  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||||||||||||||||    
T  30848739 taaaaaaaagatacataacacc 30848718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 35445667 - 35445546
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35445667 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttca 35445568  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||||||||||||||||    
T  35445567 taaaaaaaagatacataacacc 35445546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 3962248 - 3962120
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962248 ggaaaatgctagatatcaagaatgattttataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3962149  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  3962148 taaaa-aaaaatacataacacccaccaccc 3962120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 24395241 - 24395113
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395241 ggaaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 24395142  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| | | |||||||||||| |||||||    
T  24395141 taaaa-ataaatacataacacccaccaccc 24395113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 42612081 - 42611952
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42612081 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 42611982  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  42611981 taaaaaaaaaatacataacacccaccaccc 42611952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 45637981 - 45637853
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45637981 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 45637882  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||| | |||||||    
T  45637881 taaaa-aaaaatacataacatccaccaccc 45637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 4974532 - 4974658
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  4974532 aaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 4974631  T
Q  250 aaagaaagatacataacaccgaccacc 276  Q
    ||| ||| |||||||||||| ||||||    
T  4974632 aaaaaaaaatacataacacccaccacc 4974658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 25167651 - 25167766
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||    
T  25167651 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca------aatctttca 25167744  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||||||||||||||||    
T  25167745 taaaaaaaagatacataacacc 25167766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 15329544 - 15329440
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15329544 ggaaaatgctagatataaagaatgattttataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttca 15329445  T
Q  248 taaaa 252  Q
    |||||    
T  15329444 taaaa 15329440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 34483108 - 34483004
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34483108 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 34483009  T
Q  248 taaaa 252  Q
    |||||    
T  34483008 taaaa 34483004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 15577642 - 15577746
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  15577642 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatctttta 15577741  T
Q  248 taaaa 252  Q
    |||||    
T  15577742 taaaa 15577746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 35876514 - 35876410
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35876514 ggaaaatgctagatatcaagaatgattttataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35876415  T
Q  248 taaaa 252  Q
    |||||    
T  35876414 taaaa 35876410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 42696354 - 42696224
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    |||||||| |||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||    
T  42696354 ggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttc 42696255  T
Q  247 ataaaagaaagatacataacaccgaccaccc 277  Q
    |||||| ||| |||||||||| | |||||||    
T  42696254 ataaaaaaaaaatacataacatccaccaccc 42696224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 277
Target Start/End: Original strand, 37476876 - 37477004
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||||||||||||||||||||||||   |||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||| || ||  |     
T  37476876 gaaaatgctagatatcaagaatgatttatcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttattcattttatac 37476975  T
Q  249 aaaagaaagatacataacaccgaccaccc 277  Q
    | || ||| |||||||||||| |||||||    
T  37476976 agaaaaaaaatacataacacccaccaccc 37477004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 29737406 - 29737313
Alignment:
Q  157 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    |||||||||||||||||||||| |||||| ||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcata 29737313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 18037247 - 18037119
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||| ||||||||   |||||| ||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||   || |||    
T  18037247 ggaaaatgctagatatcaacaatgatttatcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt--cctctca 18037150  T
Q  248 t-aaaagaaagatacataacaccgaccaccc 277  Q
    | |||| ||| |||||||||||| |||||||    
T  18037149 taaaaaaaaaaatacataacacccaccaccc 18037119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 15238654 - 15238564
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 238  Q
    ||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  15238654 ggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 15238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 20009895 - 20010014
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 248  Q
    |||||| ||||||||| |||||||||||| | |||| |||||||||||||||| |||||||||||   |||||||| ||||||||||||||| |||| ||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaacctttaat 20009994  T
Q  249 aaaagaaagatacataacacc 269  Q
    || | ||| ||||||||||||    
T  20009995 aaga-aaaaatacataacacc 20010014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 4974796 - 4974723
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 42611815 - 42611888
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 45637716 - 45637789
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  45637716 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 15577911 - 15577841
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaga 221  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| |||||    
T  15577911 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 15329277 - 15329350
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  15329277 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 34482839 - 34482912
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 48880988 - 48880915
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 36790271 - 36790390
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    ||||||||||| ||||||| |||| |||||| || ||| |||||||||||||||| ||||||||||           || |||||||||||||| |||||    
T  36790271 ggaaaatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc-----------tctgtctcatttattaacctttc 36790359  T
Q  247 ataaaagaaagatacataacaccgaccaccc 277  Q
    |||||| ||| |||||||||||| |||||||    
T  36790360 ataaaacaaaaatacataacacccaccaccc 36790390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 15238414 - 15238459
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  15238414 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 24394976 - 24395049
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||  ||||||||||||    
T  24394976 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataacaacctttagattt 24395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 35444562 - 35444635
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  35444562 aatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 37477141 - 37477079
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatca 213  Q
    ||||||| |||||||||| |||||| | |||||||||| ||||||||||||||| ||||||||    
T  37477141 aatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatca 37477079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 40880641 - 40880706
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 214  Q
    |||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  40880641 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 40880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 3961983 - 3962056
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||| ||| ||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattt 3962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 18036990 - 18037055
Alignment:
Q  160 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||| ||| ||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattt 18037055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 25167911 - 25167838
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||| | ||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattt 25167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 29737143 - 29737216
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||| | |||||||||| ||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattt 29737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 36790527 - 36790454
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| | |||||| |||||||||| ||||||||||||||| |||||| ||| ||| ||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattt 36790454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 4666 - 4537
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4666 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 4567  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| | |||||||||||||| |||||||    
T  4566 taaaaaacagatacataacacccaccaccc 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 4400 - 4473
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  4400 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 17175816 - 17175945
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17175816 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 17175915  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  17175916 taaaaaaaaaatacataacacccaccaccc 17175945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 32702475 - 32702346
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  32702475 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttca 32702376  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| |||||||||||| ||| |||||||    
T  32702375 taaaaaaaagatacataagacccaccaccc 32702346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 33696967 - 33696837
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33696967 ggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33696868  T
Q  248 taaaagaaaga-tacataacaccgaccaccc 277  Q
    ||||| ||| | ||||||||||| |||||||    
T  33696867 taaaaaaaaaattacataacacccaccaccc 33696837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 18365369 - 18365489
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18365369 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18365468  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||| ||||||||||||    
T  18365469 taaaa-aaaaatacataacacc 18365489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 18370633 - 18370753
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18370633 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18370732  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||| ||||||||||||    
T  18370733 taaaa-aaaaatacataacacc 18370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 33695121 - 33695251
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33695121 ggaaaatgctagatatcaagaatgattttataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatctttca 33695220  T
Q  248 taaaagaaaga-tacataacaccgaccaccc 277  Q
    ||||| ||| | ||||||||||| |||||||    
T  33695221 taaaaaaaaaattacataacacccaccaccc 33695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 2309218 - 2309339
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  2309218 ggaaaatgctagatatcaacgatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 2309317  T
Q  248 taaaagaaagatacataacacc 269  Q
    ||||| ||| ||||||||||||    
T  2309318 taaaaaaaaaatacataacacc 2309339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 28675418 - 28675289
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  28675418 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttca 28675319  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||  ||| ||||||||| || |||||||    
T  28675318 taaataaaaaatacataacccccaccaccc 28675289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 23290876 - 23290986
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23290876 ggaaaatgctagatatcaaaaatgattttataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttca 23290975  T
Q  248 taaaagaaaga 258  Q
    ||||| |||||    
T  23290976 taaaaaaaaga 23290986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 150 - 277
Target Start/End: Original strand, 6031537 - 6031665
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 248  Q
    ||||| || |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  6031537 aaaatactggatatcaagaatgattttataaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttttata 6031636  T
Q  249 aaaagaaagatacataacaccgaccaccc 277  Q
    |||| ||| |||||||||||| |||||||    
T  6031637 aaaaaaaaaatacataacacccaccaccc 6031665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 17705264 - 17705367
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  17705264 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacc-ttagatttcagtctcatttattaacctttca 17705362  T
Q  248 taaaa 252  Q
    |||||    
T  17705363 taaaa 17705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 18889477 - 18889567
Alignment:
Q  186 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  18889477 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataaaacccaccaccc 18889567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 11548386 - 11548505
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 248  Q
    ||||||||||||||||||||||||||   |||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||     
T  11548386 aaaatgctagatatcaagaatgatttatcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcata 11548483  T
Q  249 -aaaagaaagatacataacacc 269  Q
     |||||||| ||||||||||||    
T  11548484 aaaaagaaaaatacataacacc 11548505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 6127506 - 6127417
Alignment:
Q  189 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata-aaagaaagatacataacaccgaccaccc 277  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  6127506 caagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataacacccaccaccc 6127417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 29693716 - 29693611
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 246  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||| |||||||||||||| ||||||||  |||||    
T  29693716 ggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctttc 29693617  T
Q  247 ataaaa 252  Q
    ||||||    
T  29693616 ataaaa 29693611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 33695388 - 33695315
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33695388 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 33696700 - 33696773
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33696700 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 34238883 - 34238948
Alignment:
Q  149 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 214  Q
    |||||||||||||||||||||||||||||| |  || |||||||||||||||| ||||||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaagaagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 582522 - 582602
Alignment:
Q  148 ggaaaatgctagatatcaagaatgatttta-taagaaaaattcaagaatgacat-ggcacaataatcacctttagatttca 226  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||| || |||| |||||||||| ||||||||||    
T  582522 ggaaaatgttagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 25987126 - 25987071
Alignment:
Q  222 tttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 277  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  25987126 tttcagtctcatttactaatctttcataaaaaaaagatacataacacccaccaccc 25987071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 6127279 - 6127352
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  6127279 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 23291145 - 23291072
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  23291145 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 11548647 - 11548576
Alignment:
Q  154 tgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||| ||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 25986934 - 25986997
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 214  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcac 25986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 9752109 - 9752161
Alignment:
Q  216 tttagatttcagtctcatttattaatctttcataaaagaaagatacataacacc 269  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  9752109 tttagatttcagtctcatttattaacctttcataaaa-aaaaatacataacacc 9752161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 17176082 - 17176009
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| || |||| ||||||||||||||| || |||||||||| ||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattt 17176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 17705526 - 17705453
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||| ||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattt 17705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 18365634 - 18365561
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||    
T  18365634 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 18370898 - 18370825
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||    
T  18370898 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18370825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 28675152 - 28675225
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| |  |||||||||| ||||||||    
T  28675152 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattt 28675225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 8515567 - 8515650
Alignment:
Q  193 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataacaccgaccaccc 277  Q
    |||||||||| | |||||||||  |||||||||||||| |||||||||  |||||||||| ||| |||||||||| | |||||||    
T  8515567 aatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcataaaa-aaaaatacataacatccaccaccc 8515650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 18889757 - 18889685
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||   ||||||| |||||||||||||||||| |||||| ||| ||||||||    
T  18889757 aatgctatatatcaagaaagatttatcaagaaaatttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 2121004 - 2121059
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatgg 202  Q
    |||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||    
T  2121004 ggaaaatgttagatatcaaaaatgattttataaaaaaagattcaagaatgacatgg 2121059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 9752278 - 9752233
Alignment:
Q  179 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  9752278 aagaaaaattcaagaatgatatggcagaataatcacccttagattt 9752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 8515786 - 8515723
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 214  Q
    ||||||| |||||||||| |||||||| |||| | ||| ||||||||||||||| |||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 32702217 - 32702282
Alignment:
Q  160 atatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||||| |||||| | | ||||| ||||||||||| |||||| |||||||||| ||||||||    
T  32702217 atatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatcacccttagattt 32702282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 11891 - 11762
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891 ggaaaatgttagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 11792  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||  |||||||    
T  11791 taaaaaaaaaatacataacactcaccaccc 11762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 11625 - 11698
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 150 - 277
Target Start/End: Complemental strand, 13110 - 12983
Alignment:
Q  150 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata 249  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13110 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 13011  T
Q  250 aaagaaagatacataacaccgaccaccc 277  Q
    ||| |||||||||||||| | |||||||    
T  13010 aaaaaaagatacataacatccaccaccc 12983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 12846 - 12919
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  12846 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 41280 - 41152
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41280 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttca 41181  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| ||| |||||||||||| |||||||    
T  41180 taaaa-aaaaatacataacacccaccaccc 41152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 41015 - 41088
Alignment:
Q  152 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  41015 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 48119 - 47991
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 247  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  48119 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctttca 48020  T
Q  248 taaaagaaagatacataacaccgaccaccc 277  Q
    ||||| | | |||||||||||| |||||||    
T  48019 taaaa-ataaatacataacacccaccaccc 47991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 47854 - 47927
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    |||||||  ||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 3252 - 3200
Alignment:
Q  229 ctcatttattaatctttcataaaagaaagatacataacaccgaccaccctatg 281  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  3252 ctcatttattaatctttcataaaaaaaaaatacataacacccaccaccctatg 3200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 3072 - 3145
Alignment:
Q  152 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 224  Q
    ||||||| |||||||||| |||||||| || |||| || ||||||||||||||| |||||||||| ||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 3145  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 85642 - 85577
Alignment:
Q  148 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 214  Q
    |||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  85642 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 85577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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