View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0618_low_11 (Length: 360)

Name: NF0618_low_11
Description: NF0618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0618_low_11
NF0618_low_11
[»] chr2 (44 HSPs)
chr2 (10-347)||(40458723-40459060)
chr2 (178-342)||(11006980-11007142)
chr2 (222-347)||(27464573-27464698)
chr2 (157-284)||(1094406-1094533)
chr2 (176-339)||(3409197-3409360)
chr2 (181-347)||(13829851-13830017)
chr2 (165-338)||(10412397-10412570)
chr2 (158-339)||(29806867-29807037)
chr2 (177-339)||(34116182-34116344)
chr2 (218-342)||(16544016-16544140)
chr2 (214-342)||(24844672-24844800)
chr2 (176-347)||(36538624-36538795)
chr2 (188-339)||(44740492-44740643)
chr2 (179-339)||(11027879-11028039)
chr2 (176-339)||(27634639-27634802)
chr2 (176-339)||(33831463-33831626)
chr2 (220-339)||(41332243-41332362)
chr2 (179-339)||(2646983-2647143)
chr2 (176-339)||(26436322-26436484)
chr2 (177-331)||(32713013-32713168)
chr2 (181-339)||(30713129-30713287)
chr2 (179-304)||(38409615-38409740)
chr2 (179-347)||(27902440-27902607)
chr2 (176-285)||(34064673-34064782)
chr2 (178-322)||(12070540-12070684)
chr2 (169-264)||(2328375-2328470)
chr2 (176-347)||(41959111-41959282)
chr2 (164-285)||(9963715-9963836)
chr2 (222-338)||(17616281-17616397)
chr2 (237-339)||(20203723-20203825)
chr2 (233-347)||(28968845-28968959)
chr2 (218-342)||(17368996-17369119)
chr2 (165-339)||(18667708-18667882)
chr2 (218-287)||(2578089-2578158)
chr2 (176-281)||(14103235-14103340)
chr2 (218-338)||(33163990-33164110)
chr2 (176-254)||(39690138-39690216)
chr2 (176-233)||(33831395-33831452)
chr2 (178-250)||(40680191-40680263)
chr2 (222-285)||(17503437-17503500)
chr2 (258-340)||(9753156-9753238)
chr2 (290-339)||(40680291-40680340)
chr2 (123-163)||(1094345-1094385)
chr2 (160-284)||(37314066-37314190)
[»] chr6 (22 HSPs)
chr6 (10-339)||(3081727-3082055)
chr6 (10-338)||(7437107-7437434)
chr6 (158-339)||(13311972-13312155)
chr6 (176-339)||(4441310-4441473)
chr6 (171-342)||(18099779-18099950)
chr6 (162-342)||(18095473-18095653)
chr6 (158-339)||(17441107-17441289)
chr6 (179-339)||(5640261-5640421)
chr6 (179-339)||(10961805-10961965)
chr6 (176-347)||(1501816-1501987)
chr6 (176-341)||(6999235-6999400)
chr6 (165-339)||(33110415-33110589)
chr6 (176-339)||(11460023-11460178)
chr6 (179-282)||(9950826-9950929)
chr6 (169-326)||(2962725-2962881)
chr6 (168-269)||(30773998-30774099)
chr6 (179-306)||(27984932-27985059)
chr6 (176-285)||(10346689-10346798)
chr6 (158-295)||(22295865-22296003)
chr6 (176-245)||(8200610-8200679)
chr6 (216-285)||(32163549-32163618)
chr6 (168-236)||(10474448-10474516)
[»] chr1 (64 HSPs)
chr1 (10-339)||(29677528-29677856)
chr1 (158-347)||(15257172-15257361)
chr1 (158-339)||(40159639-40159820)
chr1 (157-339)||(28006299-28006481)
chr1 (172-347)||(47983219-47983394)
chr1 (157-338)||(5204479-5204660)
chr1 (158-339)||(7956274-7956455)
chr1 (158-342)||(31816518-31816702)
chr1 (172-339)||(38061187-38061354)
chr1 (185-347)||(7995948-7996110)
chr1 (158-339)||(39802776-39802957)
chr1 (158-347)||(50447291-50447480)
chr1 (165-347)||(45581009-45581191)
chr1 (218-347)||(24575919-24576048)
chr1 (179-339)||(35810689-35810849)
chr1 (176-339)||(15306461-15306624)
chr1 (178-340)||(45653440-45653601)
chr1 (176-347)||(7016076-7016247)
chr1 (176-339)||(7596361-7596524)
chr1 (176-339)||(42916123-42916286)
chr1 (176-339)||(46264953-46265116)
chr1 (176-347)||(47602863-47603034)
chr1 (181-335)||(48575093-48575247)
chr1 (158-347)||(27076516-27076705)
chr1 (176-341)||(31869562-31869727)
chr1 (176-339)||(24469826-24469989)
chr1 (176-339)||(32179826-32179989)
chr1 (178-339)||(20349116-20349277)
chr1 (165-341)||(19508485-19508661)
chr1 (179-339)||(25124894-25125054)
chr1 (168-339)||(21680665-21680836)
chr1 (176-339)||(36419069-36419232)
chr1 (241-339)||(6413272-6413370)
chr1 (179-339)||(42937045-42937205)
chr1 (176-339)||(23915606-23915769)
chr1 (165-347)||(43087467-43087649)
chr1 (230-347)||(14578586-14578703)
chr1 (214-339)||(15014321-15014446)
chr1 (218-339)||(44596527-44596648)
chr1 (239-347)||(12224576-12224684)
chr1 (179-347)||(23916781-23916949)
chr1 (176-347)||(36119040-36119210)
chr1 (250-339)||(7841665-7841753)
chr1 (176-339)||(7702803-7702966)
chr1 (178-339)||(20347638-20347797)
chr1 (176-285)||(37441249-37441358)
chr1 (176-342)||(3577638-3577805)
chr1 (176-342)||(15662917-15663083)
chr1 (262-342)||(572422-572502)
chr1 (174-306)||(13645222-13645354)
chr1 (221-347)||(30251437-30251564)
chr1 (179-274)||(40002865-40002960)
chr1 (217-341)||(14101871-14101996)
chr1 (189-342)||(14796569-14796722)
chr1 (189-342)||(14805443-14805596)
chr1 (208-285)||(51432266-51432343)
chr1 (279-348)||(9381756-9381825)
chr1 (188-277)||(11991252-11991341)
chr1 (208-284)||(14770580-14770656)
chr1 (123-163)||(28006238-28006278)
chr1 (174-269)||(8828305-8828400)
chr1 (123-163)||(5204681-5204721)
chr1 (161-269)||(9381651-9381759)
chr1 (123-163)||(24575813-24575853)
[»] chr5 (48 HSPs)
chr5 (10-339)||(10493787-10494116)
chr5 (157-347)||(27196026-27196216)
chr5 (172-338)||(39407370-39407536)
chr5 (172-339)||(27450590-27450757)
chr5 (158-347)||(32945022-32945211)
chr5 (172-339)||(34719666-34719833)
chr5 (172-339)||(26298275-26298442)
chr5 (158-304)||(1225301-1225447)
chr5 (172-338)||(26299811-26299977)
chr5 (160-347)||(10327882-10328069)
chr5 (172-339)||(19716147-19716309)
chr5 (172-339)||(34857311-34857478)
chr5 (162-347)||(36523705-36523894)
chr5 (158-274)||(28246681-28246798)
chr5 (158-337)||(28431016-28431184)
chr5 (172-296)||(34723705-34723829)
chr5 (176-339)||(3801373-3801536)
chr5 (176-339)||(38522870-38523033)
chr5 (172-338)||(39409104-39409256)
chr5 (218-339)||(34724763-34724884)
chr5 (165-347)||(41783282-41783464)
chr5 (178-339)||(1840696-1840857)
chr5 (165-334)||(3457783-3457956)
chr5 (179-347)||(20188944-20189112)
chr5 (165-336)||(30660919-30661090)
chr5 (176-347)||(31620836-31621007)
chr5 (176-342)||(19282120-19282286)
chr5 (162-347)||(1091078-1091262)
chr5 (165-338)||(14500716-14500889)
chr5 (165-339)||(26218004-26218178)
chr5 (176-339)||(27906066-27906229)
chr5 (237-347)||(5382826-5382936)
chr5 (176-342)||(18880160-18880326)
chr5 (204-342)||(17168449-17168589)
chr5 (176-339)||(15933128-15933294)
chr5 (158-338)||(24535957-24536137)
chr5 (267-347)||(28247469-28247549)
chr5 (176-339)||(20190594-20190756)
chr5 (208-338)||(39414181-39414312)
chr5 (176-342)||(31021831-31021997)
chr5 (181-306)||(11136049-11136173)
chr5 (179-338)||(2675987-2676146)
chr5 (214-329)||(40056382-40056497)
chr5 (227-342)||(24202721-24202836)
chr5 (176-347)||(29328008-29328182)
chr5 (204-254)||(32157031-32157081)
chr5 (165-265)||(30051411-30051511)
chr5 (158-204)||(5384517-5384563)
[»] chr4 (74 HSPs)
chr4 (158-339)||(40797780-40797961)
chr4 (158-339)||(9222141-9222320)
chr4 (157-347)||(46944545-46944735)
chr4 (164-339)||(80453-80628)
chr4 (161-339)||(12673037-12673215)
chr4 (158-347)||(48802476-48802666)
chr4 (158-339)||(51995028-51995209)
chr4 (158-347)||(49405636-49405825)
chr4 (158-347)||(55891986-55892175)
chr4 (158-347)||(25134524-25134701)
chr4 (172-347)||(1803462-1803632)
chr4 (158-347)||(24007904-24008093)
chr4 (187-347)||(51407950-51408110)
chr4 (158-347)||(50710785-50710960)
chr4 (157-339)||(44378199-44378369)
chr4 (176-347)||(11055227-11055398)
chr4 (176-347)||(9469745-9469916)
chr4 (179-342)||(36156300-36156463)
chr4 (164-339)||(28265682-28265854)
chr4 (178-339)||(22184473-22184634)
chr4 (218-342)||(34980510-34980634)
chr4 (176-347)||(15697084-15697255)
chr4 (158-339)||(39736633-39736814)
chr4 (158-342)||(27891337-27891520)
chr4 (179-347)||(48339100-48339268)
chr4 (176-347)||(21441549-21441720)
chr4 (176-339)||(26632904-26633067)
chr4 (204-347)||(36543777-36543920)
chr4 (164-331)||(48151143-48151310)
chr4 (123-343)||(25102602-25102815)
chr4 (179-347)||(19455159-19455327)
chr4 (176-316)||(43798255-43798395)
chr4 (204-347)||(13455697-13455840)
chr4 (176-347)||(52813569-52813740)
chr4 (176-339)||(53369840-53370003)
chr4 (178-347)||(56224115-56224284)
chr4 (176-339)||(19852946-19853109)
chr4 (176-339)||(22721296-22721458)
chr4 (176-339)||(48977544-48977707)
chr4 (176-339)||(50605976-50606139)
chr4 (176-342)||(28470787-28470952)
chr4 (178-339)||(48731182-48731343)
chr4 (179-339)||(50146927-50147087)
chr4 (179-306)||(43812099-43812226)
chr4 (176-335)||(44791256-44791415)
chr4 (176-339)||(45674803-45674966)
chr4 (215-342)||(49083240-49083367)
chr4 (208-350)||(7505529-7505671)
chr4 (165-339)||(52706174-52706348)
chr4 (194-339)||(12789561-12789706)
chr4 (176-285)||(49820950-49821059)
chr4 (208-347)||(6866110-6866243)
chr4 (176-253)||(53369656-53369733)
chr4 (247-339)||(4274565-4274657)
chr4 (250-342)||(9874214-9874306)
chr4 (195-282)||(5762611-5762697)
chr4 (208-347)||(9906357-9906496)
chr4 (179-342)||(32397704-32397867)
chr4 (221-344)||(52733705-52733827)
chr4 (204-282)||(5769181-5769258)
chr4 (293-347)||(9959416-9959470)
chr4 (176-250)||(16742423-16742497)
chr4 (158-204)||(51408589-51408635)
chr4 (165-282)||(5728747-5728863)
chr4 (180-268)||(24550049-24550137)
chr4 (251-347)||(36643986-36644081)
chr4 (222-278)||(50137407-50137463)
chr4 (165-267)||(4274666-4274768)
chr4 (216-338)||(34718147-34718269)
chr4 (176-245)||(43387236-43387305)
chr4 (219-282)||(5764639-5764702)
chr4 (219-282)||(5766883-5766946)
chr4 (178-250)||(41822079-41822153)
chr4 (235-347)||(13761826-13761938)
[»] chr7 (61 HSPs)
chr7 (158-342)||(26719770-26719954)
chr7 (157-348)||(18249993-18250184)
chr7 (158-347)||(33898945-33899134)
chr7 (158-347)||(21760584-21760773)
chr7 (157-347)||(17025362-17025552)
chr7 (160-342)||(33019259-33019440)
chr7 (157-339)||(46573621-46573803)
chr7 (157-347)||(35543557-35543744)
chr7 (157-339)||(18740227-18740409)
chr7 (174-347)||(36472410-36472583)
chr7 (158-335)||(49034237-49034414)
chr7 (158-347)||(32356916-32357105)
chr7 (158-300)||(30919377-30919519)
chr7 (176-347)||(7447849-7448020)
chr7 (178-339)||(22075038-22075199)
chr7 (158-334)||(29037794-29037970)
chr7 (176-347)||(37334251-37334422)
chr7 (164-338)||(23227009-23227183)
chr7 (164-338)||(23236162-23236336)
chr7 (214-339)||(33124706-33124831)
chr7 (158-342)||(31491770-31491954)
chr7 (176-339)||(44421910-44422074)
chr7 (176-339)||(5776139-5776302)
chr7 (165-347)||(11595797-11595979)
chr7 (176-337)||(10618894-10619055)
chr7 (164-339)||(33171543-33171718)
chr7 (188-339)||(33935493-33935644)
chr7 (165-339)||(45055690-45055864)
chr7 (179-347)||(37401567-37401735)
chr7 (176-340)||(45176218-45176382)
chr7 (176-339)||(222235-222398)
chr7 (176-339)||(43052845-43053008)
chr7 (179-347)||(3942152-3942320)
chr7 (176-339)||(5794945-5795108)
chr7 (176-347)||(20400969-20401140)
chr7 (176-339)||(36926972-36927135)
chr7 (176-347)||(42072056-42072227)
chr7 (165-326)||(40480072-40480234)
chr7 (218-344)||(48634462-48634588)
chr7 (176-285)||(48505851-48505960)
chr7 (175-339)||(28949767-28949931)
chr7 (176-339)||(665856-666019)
chr7 (258-350)||(41449795-41449887)
chr7 (176-339)||(3930725-3930888)
chr7 (176-339)||(10096444-10096607)
chr7 (176-285)||(26216245-26216354)
chr7 (176-287)||(2466577-2466689)
chr7 (179-341)||(17608688-17608847)
chr7 (176-347)||(27231540-27231711)
chr7 (221-299)||(37101148-37101225)
chr7 (183-269)||(37250014-37250100)
chr7 (176-253)||(15434216-15434293)
chr7 (208-285)||(23237580-23237657)
chr7 (123-163)||(17025573-17025613)
chr7 (123-163)||(18740430-18740470)
chr7 (298-347)||(6866682-6866731)
chr7 (230-339)||(37106853-37106962)
chr7 (164-245)||(41449712-41449793)
chr7 (265-334)||(46652647-46652716)
chr7 (259-339)||(24128509-24128589)
chr7 (123-163)||(46573824-46573864)
[»] chr3 (43 HSPs)
chr3 (158-339)||(20550211-20550392)
chr3 (158-339)||(40943511-40943692)
chr3 (157-339)||(12710651-12710833)
chr3 (157-347)||(30662132-30662322)
chr3 (158-339)||(54432186-54432381)
chr3 (157-348)||(26049540-26049731)
chr3 (158-327)||(15822370-15822539)
chr3 (176-339)||(9505130-9505293)
chr3 (179-339)||(54393452-54393612)
chr3 (176-339)||(52934780-52934943)
chr3 (161-342)||(26136286-26136467)
chr3 (179-347)||(33438732-33438900)
chr3 (176-339)||(39135322-39135485)
chr3 (176-347)||(39469532-39469703)
chr3 (176-347)||(46293214-46293385)
chr3 (208-347)||(52199429-52199568)
chr3 (176-347)||(32689137-32689308)
chr3 (164-329)||(48730856-48731021)
chr3 (176-339)||(25253670-25253833)
chr3 (176-339)||(28242551-28242714)
chr3 (176-339)||(41609856-41610018)
chr3 (208-339)||(39942809-39942940)
chr3 (165-295)||(5418635-5418765)
chr3 (176-339)||(44574494-44574657)
chr3 (214-340)||(18074582-18074708)
chr3 (175-339)||(19560783-19560947)
chr3 (158-230)||(49026569-49026641)
chr3 (208-338)||(1674629-1674759)
chr3 (176-339)||(23206317-23206479)
chr3 (242-339)||(45714730-45714827)
chr3 (176-296)||(50965371-50965492)
chr3 (176-296)||(51068506-51068627)
chr3 (176-265)||(52199357-52199446)
chr3 (216-339)||(28687080-28687203)
chr3 (165-282)||(18652517-18652633)
chr3 (229-338)||(30743593-30743702)
chr3 (179-255)||(53529683-53529759)
chr3 (222-333)||(31589636-31589747)
chr3 (123-163)||(12710590-12710630)
chr3 (123-163)||(26049752-26049792)
chr3 (176-306)||(1072751-1072881)
chr3 (221-254)||(29536610-29536643)
chr3 (123-163)||(30662343-30662383)
[»] scaffold0135 (1 HSPs)
scaffold0135 (158-339)||(32794-32973)
[»] scaffold0171 (1 HSPs)
scaffold0171 (199-347)||(21079-21226)
[»] scaffold0223 (1 HSPs)
scaffold0223 (158-347)||(14376-14565)
[»] chr8 (21 HSPs)
chr8 (158-335)||(22563956-22564133)
chr8 (158-338)||(1091672-1091857)
chr8 (176-339)||(3307902-3308065)
chr8 (248-339)||(39478090-39478181)
chr8 (179-347)||(33279978-33280146)
chr8 (176-339)||(453451-453614)
chr8 (165-339)||(34654992-34655166)
chr8 (247-347)||(12378391-12378491)
chr8 (247-339)||(43384833-43384925)
chr8 (176-339)||(11161540-11161703)
chr8 (179-339)||(34516109-34516269)
chr8 (208-338)||(27189092-27189222)
chr8 (185-306)||(23181132-23181253)
chr8 (174-339)||(43967476-43967641)
chr8 (176-339)||(9412533-9412696)
chr8 (176-338)||(32740607-32740769)
chr8 (184-257)||(10749310-10749383)
chr8 (217-269)||(24854608-24854660)
chr8 (245-339)||(17865397-17865491)
chr8 (123-163)||(13784582-13784622)
chr8 (160-224)||(39478042-39478106)
[»] scaffold0444 (1 HSPs)
scaffold0444 (157-339)||(788-958)
[»] scaffold0224 (1 HSPs)
scaffold0224 (176-339)||(7317-7480)
[»] scaffold0022 (1 HSPs)
scaffold0022 (176-339)||(124490-124653)
[»] scaffold0204 (1 HSPs)
scaffold0204 (179-347)||(26622-26790)
[»] scaffold0063 (1 HSPs)
scaffold0063 (180-339)||(51311-51470)
[»] scaffold0002 (1 HSPs)
scaffold0002 (176-342)||(96248-96414)
[»] scaffold0260 (2 HSPs)
scaffold0260 (178-339)||(11439-11600)
scaffold0260 (178-339)||(9961-10120)
[»] scaffold0025 (1 HSPs)
scaffold0025 (217-342)||(11399-11524)
[»] scaffold0316 (1 HSPs)
scaffold0316 (176-339)||(19264-19427)
[»] scaffold0263 (1 HSPs)
scaffold0263 (176-269)||(17203-17296)
[»] scaffold0954 (1 HSPs)
scaffold0954 (208-285)||(247-324)


Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 347
Target Start/End: Original strand, 40458723 - 40459060
Alignment:
Q  10 gatgtgggacaaattttatacatacgtttgtttaaaagtcatgtgaaggtactattaactannnnnnnncctttctctagtataacaattatcgttgatt 109  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  40458723 gatgtgggacaaattttatgcatacgtttgtttaaaagtcatgtgaaggtactattaactattttttttcctttctctagtataacaattatcgttgatt 40458822  T
Q  110 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  40458823 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatttatttggttcatgaaccaaacgagtcgaactatacttagttc 40458922  T
Q  210 aagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatc 309  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40458923 aagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcgagtatc 40459022  T
Q  310 gaactattttcgagttggttcggttcattgtcatccct 347  Q
     |||||||||| ||||||||||||||||||||| ||||    
T  40459023 aaactattttcaagttggttcggttcattgtcagccct 40459060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 11007142 - 11006980
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11007142 atgaaccaaacgagtcgaattatacttatttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 11007043  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||| || ||||||||| ||||||  || ||||||||||||||||||||||||||||||||    
T  11007042 agttcaacgaatcaattatcggatcgag--tcaaactattttcgagttggttcggttcattgtca 11006980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 27464698 - 27464573
Alignment:
Q  222 tttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcg 321  Q
    ||||||||  || |||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| ||| ||||||||||||||    
T  27464698 tttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcg 27464599  T
Q  322 agttggttcggttcattgtcatccct 347  Q
    ||||||||||||||||||||| ||||    
T  27464598 agttggttcggttcattgtcagccct 27464573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 284
Target Start/End: Original strand, 1094406 - 1094533
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||| ||||||||||||||| ||||| |  ||||| ||  |||||||||| ||||||||||||||||||||||||||||    
T  1094406 ttatatatatcgagctggttcatgatccaaacgagtcgaaccatactcaactcaagttcgactcatttattcaacgagcttaattttcaactcaagttcg 1094505  T
Q  257 actcatttggttcgtgaaccaagttcaa 284  Q
    ||||||||||||| |||||||| |||||    
T  1094506 actcatttggttcatgaaccaaattcaa 1094533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 3409360 - 3409197
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| ||| ||||||||||||||   || ||||  |||||||||||||||||||| ||||||||||| |||||||||   ||||||||||| |||||    
T  3409360 tcatgaatcaatcgagtcgaactatatacagctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaac 3409261  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| |   |||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  3409260 caagttcaacgagttaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattg 3409197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 13829851 - 13830017
Alignment:
Q  181 aaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagt 280  Q
    ||||||||||||||||| ||||| | |||||| ||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||||  ||||||||||    
T  13829851 aaccaaacgagtcgaaccatactcaattcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagt 13829950  T
Q  281 tcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||| || ||||||||||||||| |||| |  |||||| ||||| |||||| ||| ||||| ||||    
T  13829951 tcaacgaatcaattatcgaatcgattatcaagttatttttgagtttgttcggctcaatgtcagccct 13830017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 165 - 338
Target Start/End: Original strand, 10412397 - 10412570
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||||| |||||||||||| |||||| | ||||  ||| |||||  || |||||||||||||||||||||||||| |||||||||||||||||| |    
T  10412397 atcgagttggctcatgaaccaaatgagtcggattatatatagctcaagtccaactcatttatttaacgagcttaatttttaactcaagttcgactcatct 10412496  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
     |||   ||||| | || ||| ||| ||||| |||||||| | |||||||||||||||||||||| ||||||||    
T  10412497 agtttacgaaccgaatttaacgaactaattaccgaatcgaatctcgaactattttcgagttggtttggttcatt 10412570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 29806867 - 29807037
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||| ||| ||||||||||||| |||||||||||| ||||  || ||||| ||| ||||||||||||||| | ||| |           |||||     
T  29806867 tatatatatagagctggttcatgaacctaacgagtcgaaccatacgaagctcaagttcaactcatttatttaacgggtttagt-----------gttcgg 29806955  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  29806956 ctcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattg 29807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 177 - 339
Target Start/End: Complemental strand, 34116344 - 34116182
Alignment:
Q  177 catgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacc 276  Q
    ||||||||||||||||||||||| |  ||| ||||| |||||||| ||||||| ||| ||||||||| | |||||||||| |||||||||||| |||||     
T  34116344 catgaaccaaacgagtcgaactacatatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaact 34116245  T
Q  277 aagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||| ||||| |||||||  |||||| |  |||||| |  |||||||||||||| ||||||    
T  34116244 aagttcgacaaatcaattattaaatcgaattacgaactctaatcgagttggttcggctcattg 34116182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 16544016 - 16544140
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||||||||||| ||||||||| ||||||| ||| | | |||||||| |||||||||||||||||||   ||||||||||||||| | ||||| ||    
T  16544016 ctcatttatttaacgaacttaatttttaactcaaattcaaattatttggttggtgaaccaagttcaacaaatacattatcgaatcgagtcttgaactttt 16544115  T
Q  318 ttcgagttggttcggttcattgtca 342  Q
    | ||||||| |||||||||||||||    
T  16544116 tccgagttgcttcggttcattgtca 16544140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 24844800 - 24844672
Alignment:
Q  214 tcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaac 313  Q
    |||||||||||||||| |||  |||||||||| |||||||||  |||||||||||| ||||||||||||||| |   ||||  |||||||||| ||||||    
T  24844800 tcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttcgaac 24844701  T
Q  314 tattttcgagttggttcggttcattgtca 342  Q
    |||| |||||||||||||| |||||||||    
T  24844700 tattatcgagttggttcggatcattgtca 24844672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 36538624 - 36538795
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| | |||||||||| ||||||| ||||||||||| ||||||| | |||| || ||||| |||||    
T  36538624 tcatgaacctaacgagtcgaactatatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaac 36538723  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  ||||||||||| |||||||||||| ||||    
T  36538724 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagccct 36538795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 188 - 339
Target Start/End: Complemental strand, 44740643 - 44740492
Alignment:
Q  188 cgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaa 287  Q
    ||||||||||||||   || ||||| ||||||||||| |||||||| ||||||||| | |||||||||  ||| |||||||| ||||||||||||||| |    
T  44740643 cgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacga 44740544  T
Q  288 accaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
       |||| |||||||||||  | ||||||| |||||||||||||||||||||    
T  44740543 gttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattg 44740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 179 - 339
Target Start/End: Original strand, 11027879 - 11028039
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||| ||||| |||||||| ||| || |||| ||||||||| |  ||||||||| |||||||||||| ||||||||    
T  11027879 tgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaa 11027978  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||| || || |||||||||||| || |  |||||| |  | |||||||||||||||||||    
T  11027979 gttcgacgaatcaattatcgaattgaattacgaactctaattgagttggttcggttcattg 11028039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 27634639 - 27634802
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| |||||||| |||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  27634639 tcatgaacctaacgagtcaaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 27634738  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
     |||||||||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  27634739 taagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 27634802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 33831463 - 33831626
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  33831463 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 33831562  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| ||||||  |  |  |||||| |||| | |||||||||  |||||||||||||||||||||    
T  33831563 caaattcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 33831626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 220 - 339
Target Start/End: Original strand, 41332243 - 41332362
Alignment:
Q  220 catttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatttt 319  Q
    |||||||||||| | ||||||||||| ||||| ||| ||||| ||||||  |||||||||||||||||   |||| ||||||||||| ||||||||| ||    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  320 cgagttggttcggttcattg 339  Q
    |||||||||| |||||||||    
T  41332343 cgagttggtttggttcattg 41332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 2647143 - 2646983
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||||||||||||||||  ||  ||||| ||| || ||||| ||||||| ||||||||| | |||||||||| ||| |||||||| ||||||||    
T  2647143 tgaaccaaacgagtcgaactatatataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaa 2647044  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| ||| ||||| ||| ||||||   ||||| | || ||||||  |||||||||||    
T  2647043 gttcaacgaactaattaccgagtcgagttctgaactttatttgagttgtatcggttcattg 2646983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 26436322 - 26436484
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| |||| ||||  ||| || ||||| |||||    
T  26436322 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaac 26436421  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | || || |||  |||||||||||||||||||||    
T  26436422 caagttcaacggattaaatatcgagtcgaatgtc-aattataatcgagttggttcggttcattg 26436484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 331
Target Start/End: Complemental strand, 32713168 - 32713013
Alignment:
Q  177 catgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacc 276  Q
    |||||| |||||||||||||| ||||| |||| ||| |||  | |||||||||||||||||||||||||||  | |||||||||||||||||| |||| |    
T  32713168 catgaatcaaacgagtcgaaccatactcagtttaagttcaaattatttatttaacgagcttaattttcaacatatgttcgactcatttggttcatgaatc 32713069  T
Q  277 aag-ttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcg 331  Q
    ||| |||||| || || ||||| ||| || ||| ||  |||||||||||| |||||    
T  32713068 aagtttcaacgaatcatttatcaaattgaatattgagttattttcgagtttgttcg 32713013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 30713129 - 30713287
Alignment:
Q  181 aaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagt 280  Q
    ||||||||||||||||||  |  ||| ||||| ||| |||| ||| || |||| ||||| ||||| |||| ||||| |||||||||||| ||||||||||    
T  30713129 aaccaaacgagtcgaactgcatatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagt 30713228  T
Q  281 tcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    || || || ||||||||||||||| |  |||||  |  |||||||||||||||||||||    
T  30713229 tcgacgaatcaattatcgaatcgaattacgaacactaatcgagttggttcggttcattg 30713287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 38409740 - 38409615
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||| |||||||||  ||||| ||| |||||||| ||| || || | ||||||||||| |||||||||| |||||||||||| ||||||||    
T  38409740 tgaaccaaacgagccgaactatatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 38409641  T
Q  279 gttcaacaaaccaattatcgaatcga 304  Q
     ||| || || ||||| |||||||||    
T  38409640 attcgacgaatcaattgtcgaatcga 38409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 347
Target Start/End: Complemental strand, 27902607 - 27902440
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||| ||||| ||| |||| ||| || ||||  |||||||||| ||||||||||  |||||| |||| ||||||||    
T  27902607 tgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgat-ttaattttcagctcaagttcggttcattttgttcatgaaccaa 27902509  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||| || || ||||| ||||||||| |  |||||| |  |||||||||||||||||| ||||| ||||    
T  27902508 gttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttcaatgtcagccct 27902440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 34064673 - 34064782
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  34064673 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 34064772  T
Q  276 caagttcaac 285  Q
     |||||||||    
T  34064773 taagttcaac 34064782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 322
Target Start/End: Complemental strand, 12070684 - 12070540
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||| ||||||||||||||||||| ||||| ||| | | || |||| ||||||||  |||||||||||||||||||||| |||||| |||   ||| ||    
T  12070684 atgaagcaaacgagtcgaactatacatagtttaagtttaacttatttgtttaacgaatttaattttcaactcaagttcgattcatttagttgacgaatca 12070585  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcga 322  Q
    | |||||| ||  ||||| ||||| |||| || ||||||||||||    
T  12070584 aattcaacgaattaattaccgaattgagtctcaaactattttcga 12070540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 2328470 - 2328375
Alignment:
Q  169 agttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||||||||| || |||||||||||||||  || |||||| ||| ||||||||||| | | | ||||||||||||||||||| |||||||||    
T  2328470 agttggttcatgaatcacacgagtcgaactatatataattcaagttcaactcatttatttgaagggtttaattttcaactcaagtttgactcattt 2328375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 41959111 - 41959282
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||| ||||||||||||||||  ||| | | | |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| ||||     
T  41959111 tcattaacctaacgagtcgaactatatgtagcttatgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaat 41959210  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||| ||||||||||||||| ||||    
T  41959211 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgtcagccct 41959282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 9963715 - 9963836
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    ||||||||| | ||||||||||| ||||||  ||||||   |  ||||| ||||||||||||| |||||| ||||||||| |||| ||||||  ||||||    
T  9963715 tatcgagttagctcatgaaccaatcgagtcagactatatacaactcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatt 9963814  T
Q  264 tggttcgtgaaccaagttcaac 285  Q
    |||||| |||||| ||||||||    
T  9963815 tggttcatgaacccagttcaac 9963836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 17616281 - 17616397
Alignment:
Q  222 tttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcg 321  Q
    |||| |||| || ||||||||| | |||||||||| |||||||||||| || | ||| |||||| |   |||| ||||||||||| || |||||||||||    
T  17616281 tttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcg 17616380  T
Q  322 agttggttcggttcatt 338  Q
    |||||||||| ||||||    
T  17616381 agttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 20203825 - 20203723
Alignment:
Q  237 taattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttca 336  Q
    ||||||||| |||| ||| |||||||||||||| ||||||||||||||| || ||||| | ||||||| |  |||||| |  |||||||||||||||| |    
T  20203825 taattttcagctcaggtttgactcatttggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaa 20203726  T
Q  337 ttg 339  Q
    |||    
T  20203725 ttg 20203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 347
Target Start/End: Original strand, 28968845 - 28968959
Alignment:
Q  233 agcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcgg 332  Q
    ||||||||||||||||||| || ||||||||||||||  ||||  | |||||| |   |||||||||||||||| || ||||||| ||| |||| || ||    
T  28968845 agcttaattttcaactcaaatttgactcatttggttcacgaactgaattcaacgagttaattatcgaatcgagtctcaaactattctcgggttgatttgg 28968944  T
Q  333 ttcattgtcatccct 347  Q
    |||||||||| ||||    
T  28968945 ttcattgtcagccct 28968959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 17369119 - 17368996
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||| ||||| |  |||||||||||||||||||||||||| ||||||| | ||| || |||||| |   |||| |||| | ||||  ||||||||     
T  17369119 ctcatttacttaacaaatttaattttcaactcaagttcgactca-ttggttcataaactaaattcaacgagttaattgtcgagttgagttccgaactata 17369021  T
Q  318 ttcgagttggttcggttcattgtca 342  Q
    |||||||||| ||||||||||||||    
T  17369020 ttcgagttggctcggttcattgtca 17368996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 339
Target Start/End: Original strand, 18667708 - 18667882
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  ||| ||||||||||||||||||||||||  ||  ||||| ||| || |||||||||||||  ||||  || | ||||| ||   ||| |||    
T  18667708 atcgagtcagtttatgaaccaaacgagtcgaactatatataactcaagttcaacttatttatttaacgaaattaagctttagctcaaattatgctcgttt 18667807  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||| |||||||||||||| |||  ||||| ||| ||||||  |||||| | || ||||||  |||||||||||    
T  18667808 ggttcatgaaccaagttcaataaaataattaccgagtcgagttccgaactttatttgagttgtatcggttcattg 18667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 2578089 - 2578158
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaa 287  Q
    ||||||||||||||||  |||||||||| |||||||||  |||||||| ||| |||| ||||||||||||    
T  2578089 ctcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaacaa 2578158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 14103235 - 14103340
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| |||| || ||||| ||||  ||||| ||| || ||||||||| ||||||| |||||||||||  | |||||||||| |||||| || |||||    
T  14103235 tcatgaatcaaatgaatcgaaatatatatagtttaagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaac 14103334  T
Q  276 caagtt 281  Q
    ||||||    
T  14103335 caagtt 14103340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 338
Target Start/End: Complemental strand, 33164110 - 33163990
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||  |  |  |||||| |||| | |||||||||     
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  318 ttcgagttggttcggttcatt 338  Q
     |||| |||||||||||||||    
T  33164010 atcgaattggttcggttcatt 33163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 254
Target Start/End: Original strand, 39690138 - 39690216
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagtt 254  Q
    |||||||||||||||||||||||| |  ||| ||||| ||| |||| ||| || |||| ||||||||||| ||||||||    
T  39690138 tcatgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcagctcaagtt 39690216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 33831395 - 33831452
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacga 233  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| |||||||    
T  33831395 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacga 33831452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 40680191 - 40680263
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactca 250  Q
    ||||||||| ||||||||||||||  ||  ||||  |||||||||||||||||||| | ||||||||| ||||    
T  40680191 atgaaccaatcgagtcgaactatatataactcaaattcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 17503437 - 17503500
Alignment:
Q  222 tttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaac 285  Q
    |||| ||||| | ||||||||||||||||| ||||| ||||||| ||  |||||||||||||||    
T  17503437 tttagttaacaaacttaattttcaactcaaattcgattcatttgtttaatgaaccaagttcaac 17503500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 9753156 - 9753238
Alignment:
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgt 340  Q
    |||||||||||| ||||||||  | ||| || ||||| ||||||||| | ||||||| | ||||| |||| ||||||||||||    
T  9753156 ctcatttggttcatgaaccaaacttaacgaatcaattgtcgaatcgaatctcgaactttgttcgacttggctcggttcattgt 9753238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 40680291 - 40680340
Alignment:
Q  290 caattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||||| |  ||||||||| | |||||||||||||||||||    
T  40680291 caattatcgaatcgaattccgaactattattgagttggttcggttcattg 40680340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 1094345 - 1094385
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    |||||||| |||||| ||||||||||||| |||||||||||    
T  1094345 taattattggaagaagcttgtaataaattacatattatata 1094385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 284
Target Start/End: Original strand, 37314066 - 37314190
Alignment:
Q  160 tatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgact 259  Q
    ||||||| ||||||||||||||| ||||| | | ||||||||| ||| | ||| | | |  ||||||||||| |  |||||||| ||||||| || ||||    
T  37314066 tatatattgagttggttcatgaatcaaacaaatggaactatacatagcttaagtttaacaaatttatttaacaaatttaattttgaactcaaatttgact 37314165  T
Q  260 catttggttcgtgaaccaagttcaa 284  Q
     ||||| ||  ||||| ||||||||    
T  37314166 tatttgatttatgaacaaagttcaa 37314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 10 - 339
Target Start/End: Complemental strand, 3082055 - 3081727
Alignment:
Q  10 gatgtgggacaaattttatacatacgtttgtttaaaagtcatgtgaaggtactattaactannnnnnnncctttctctagtataacaattatcgttgatt 109  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  3082055 gatgtgggacaaattttatgcatatgtttgtttaaaagtcatgtgaaggtactattaactattttttt-cctttctctagtataacaattatcgttgatt 3081957  T
Q  110 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  3081956 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatcaaaatggttcatgaaccaaacgagtcgaactatacttagttc 3081857  T
Q  210 aagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatc 309  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3081856 aagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcgagtatc 3081757  T
Q  310 gaactattttcgagttggttcggttcattg 339  Q
    |||||||||||||| |||||||||||||||    
T  3081756 gaactattttcgagctggttcggttcattg 3081727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 10 - 338
Target Start/End: Original strand, 7437107 - 7437434
Alignment:
Q  10 gatgtgggacaaattttatacatacgtttgtttaaaagtcatgtgaaggtactattaactannnnnnnncctttctctagtataacaattatcgttgatt 109  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  7437107 gatgtgggacaaattttatgcatatgtttgtttaaaagtcatgtgaaggtactattaactattttttt-cctttctctagtataacaattatcgttgatt 7437205  T
Q  110 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7437206 tttattcaaatagtaattattagaagaaacttgtaataaattttgtattatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttc 7437305  T
Q  210 aagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatc 309  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  7437306 aagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcgagtatc 7437405  T
Q  310 gaactattttcgagttggttcggttcatt 338  Q
    |||||||||||||||| ||||||||||||    
T  7437406 gaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 13311972 - 13312155
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| ||||||||||||||||||||| |||| ||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  13311972 tatatatgtcgagctggttcatgaaccaaacgagttgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcga 13312071  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgag--tatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||| |||||||||| |||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13312072 ctcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatatcgaactattttcgagttggttcggttcattg 13312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 4441473 - 4441310
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||| ||||||||||   |||||||| |||||||||||||||||||| |||||||||||||||||||||  ||||||| ||||||||||    
T  4441473 tcatgaaccaaccgaatcgaactatatacagttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaac 4441374  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| | | |||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  4441373 caagttcaacgagctaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattg 4441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 171 - 342
Target Start/End: Original strand, 18099779 - 18099950
Alignment:
Q  171 ttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcg 270  Q
    |||||||||||||||||||| | ||||||| | ||| ||||| ||| |||||||||||||||| ||||||| | ||||||| ||||||||||||||||||    
T  18099779 ttggttcatgaaccaaacgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcg 18099878  T
Q  271 tgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    ||||||||||||||| || | ||||||||||||||| || |||| |||||||||||||| ||||||||||||    
T  18099879 tgaaccaagttcaacgaatccattatcgaatcgagtctcaaacttttttcgagttggtttggttcattgtca 18099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 342
Target Start/End: Original strand, 18095473 - 18095653
Alignment:
Q  162 tatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactca 261  Q
    |||||||| ||||||||||||| ||| || | ||||||| | ||| ||||| ||| |||||||||||||||| ||||||||| ||||||||||||||| |    
T  18095473 tatatcgaattggttcatgaacaaaatgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgactta 18095572  T
Q  262 tttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||||||||||||||||||| || | ||||||||||||||| || |||| |||| ||||||||| ||||||||||||    
T  18095573 tttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtctcaaactttttttgagttggtttggttcattgtca 18095653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 17441107 - 17441289
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagc-tcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    ||||||||| ||||||  || ||||||||| |||||||||||| | ||  ||||| || || |||||||||| ||||||||||||||||||||||||||     
T  17441107 tatatatattgagttgtctcgtgaaccaaatgagtcgaactatccataactcaagttcggcctcatttatttgacgagcttaattttcaactcaagttca 17441206  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||||| ||||||||| ||  ||||| | |||||||| |||||||||||||| |||||||||||||||||    
T  17441207 actcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactattttcgggttggttcggttcattg 17441289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 5640421 - 5640261
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||||||||||||||||  ||||||||| |||||||| ||| || |||| |||||||||||  ||||||||| |||||||||||| ||||||||    
T  5640421 tgaaccaaacgagtcgaactatatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 5640322  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||| || || ||||||||||||||| |  |||||| |  |||||||||||||||||||||    
T  5640321 gttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcggttcattg 5640261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 10961965 - 10961805
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||||||||| |||||||| ||| || |||| ||||||||||| ||||| ||||||||||||||||| ||||||||    
T  10961965 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaa 10961866  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || ||||| ||||||| | |  | |||| |  |||||||||||||||||||||    
T  10961865 gttcaacgaatcaattgtcgaatcaaattacaaactttaatcgagttggttcggttcattg 10961805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 1501816 - 1501987
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||||||||   || | ||| |  ||||||||||||||||| ||||||||||| ||||||||||  ||||||||||| |||||    
T  1501816 tcatgaaccaaccgagtcgaactatatacagcttaagtttggctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaac 1501915  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
     ||||||||| |   |||| || |||||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  1501916 gaagttcaacgagttaattgtcaaatcgagtttcgaacaattgtcgagttggttcggttcattgtcagccct 1501987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 176 - 341
Target Start/End: Original strand, 6999235 - 6999400
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||||||||   |||||||| |||| |||||| |||||| | ||||||||||| |||||||||  ||||||| |||| | |||    
T  6999235 tcatgaaccaaccgagtcgaactatataaagttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaac 6999334  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtc 341  Q
    |||||||||| ||  |||||||||||||||| || ||||||| |||||||| |||| || ||||||    
T  6999335 caagttcaacgaattaattatcgaatcgagtctcaaactattgtcgagttgcttcgatttattgtc 6999400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 339
Target Start/End: Original strand, 33110415 - 33110589
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||| |||| |||||||||||||||||||||||  ||  ||||| ||  |||||||| ||||||| |||||| || | || ||||||| ||| |||    
T  33110415 atcgagttagttcgtgaaccaaacgagtcgaactatatataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgttt 33110514  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||| ||||||||||||||| ||| ||||| ||| ||||||  |||||| | |||||||||  |||||||||||    
T  33110515 ggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 33110589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 11460178 - 11460023
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||||| |||||||||||||| | |  ||||| |||||||||||||||||| | ||||||| ||| |||||        |||||||||| |||||    
T  11460178 tcataaaccaaccgagtcgaactatattcaactcaagttcagctcatttatttaacaaacttaattctcagctcaa--------catttggttcatgaac 11460087  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| || |||||||||||||||||  ||||||||| | ||||||| |||||||||||    
T  11460086 caagttcaacgaatcaattatcgaatcgagttccgaactattattgagttggatcggttcattg 11460023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 9950929 - 9950826
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||||||| |||||| |  ||| ||||| |||||||| ||| || |||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  9950929 tgaaccaaacgagttgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaa 9950830  T
Q  279 gttc 282  Q
    ||||    
T  9950829 gttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 326
Target Start/End: Complemental strand, 2962881 - 2962725
Alignment:
Q  169 agttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtt 268  Q
    |||||||||||||| ||||||||| ||| ||||| ||||| ||| |  ||||||||||||||| | ||||||||||||||||| ||  ||||||||||||    
T  2962881 agttggttcatgaatcaaacgagttgaattatacatagtttaagtttggctcatttatttaactaacttaattttcaactcaaatttaactcatttggtt 2962782  T
Q  269 cgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttg 326  Q
      ||||| | ||| ||||||  ||| || |||| ||| ||||||||||||| ||||||    
T  2962781 tttgaactatgtttaacaaattaatgattgaattgag-atcgaactatttttgagttg 2962725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 30773998 - 30774099
Alignment:
Q  168 gagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggt 267  Q
    ||||||| |||||||||||| |||||| | ||||| ||| | ||| ||| ||||||||||||||| ||||||| |||||||||| || ||||||||||||    
T  30773998 gagttggctcatgaaccaaatgagtcggattatacatagcttaagttcatctcatttatttaacgtgcttaatattcaactcaaatttgactcatttggt 30774097  T
Q  268 tc 269  Q
    ||    
T  30774098 tc 30774099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 27985059 - 27984932
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||| ||||||||||||||| |  ||||||||| |||||||| ||| || || | |||||||||||  ||||||||| |||||||||||| | ||||||    
T  27985059 tgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaa 27984960  T
Q  279 gttcaacaaaccaattatcgaatcgagt 306  Q
    |||| || || ||||| |||||| ||||    
T  27984959 gttcgacgaatcaattgtcgaattgagt 27984932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 10346689 - 10346798
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||  ||||||||||||||||  ||  ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  10346689 tcatgaacttaacgagtcgaactatatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 10346788  T
Q  276 caagttcaac 285  Q
    ||||||||||    
T  10346789 caagttcaac 10346798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 295
Target Start/End: Original strand, 22295865 - 22296003
Alignment:
Q  158 tatatatat-cgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    ||||||||| |||||  |||||||||||||| |||| ||||||||  ||  ||||  ||| | |||||| ||||||| |||||| || | ||||||||||    
T  22295865 tatatatattcgagtcagttcatgaaccaaaagagttgaactatatataactcaaattcaacacatttacttaacgaacttaatctttagctcaagttcg 22295964  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaatta 295  Q
     ||| |||||||| ||||||||||| || |||| |||||    
T  22295965 gctcgtttggttcatgaaccaagtttaataaactaatta 22296003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 8200610 - 8200679
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttca 245  Q
    ||||||||| ||||||||||||||||  ||| ||||| ||| |||||||| ||||||| |||||||||||    
T  8200610 tcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttca 8200679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 32163549 - 32163618
Alignment:
Q  216 agctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaac 285  Q
    |||||||||| ||||||| ||||||||||||||||||||   |||||| ||||| ||||||| |||||||    
T  32163549 agctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaac 32163618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 10474516 - 10474448
Alignment:
Q  168 gagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagct 236  Q
    ||||||||| ||||||||||||||| ||||| | | ||| ||||| ||| |||||||| ||||||||||    
T  10474516 gagttggtttatgaaccaaacgagttgaactttgcatagctcaagttcaactcatttagttaacgagct 10474448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 10 - 339
Target Start/End: Complemental strand, 29677856 - 29677528
Alignment:
Q  10 gatgtgggacaaattttatacatacgtttgtttaaaagtcatgtgaaggtactattaactannnnnnnncctttctctagtataacaattatcgttgatt 109  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||        |||||||||| ||||||||||||||||||||    
T  29677856 gatgtaggacaaattttatgcatatgtttgtttaaaagtcatgtgaaggtattattaactattttttttcctttctcta-tataacaattatcgttgatt 29677758  T
Q  110 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttc 209  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29677757 cttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatcgagttggttcatgaagcaaacgagtcgaactatacttagttc 29677658  T
Q  210 aagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatc 309  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  29677657 aagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcgagtatc 29677558  T
Q  310 gaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||||||||||||||||||||    
T  29677557 gaactattttcgagttggttcggttcattg 29677528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 15257361 - 15257172
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| ||||| |||||||||||||||||||  ||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  15257361 tatatatgtcgagctggttgatgaaccaaacgagtcgaatcatactaagttcaaattcaactcatttatttaacgagcttaattttcaactcaagttcga 15257262  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| |||||||||| |||  ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  15257261 ctcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaactatttttgagttggttcggttcattgtcagccct 15257172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 40159820 - 40159639
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  40159820 tatatatgtcgagctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcga 40159721  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||| ||| |||||||||| |||  |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  40159720 ctcatttgattcatgaaccaagtccaatgaaccaattatcgaatcgaatatcaaactattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 157 - 339
Target Start/End: Original strand, 28006299 - 28006481
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||| |  ||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  28006299 ttatatatatcgagctggttcatgaactaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcg 28006398  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||||||||||||||| |  ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  28006399 actcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 28006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 172 - 347
Target Start/End: Original strand, 47983219 - 47983394
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| |||||||  | ||| ||| ||||||||||||||||| |||  ||| |||||||||||||||||||||||||||    
T  47983219 tggttcatgaaccaaacgagtcgaaccatacttaacttaagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgt 47983318  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  47983319 gaaccaagttcaacaaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgtcaaccct 47983394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 157 - 338
Target Start/End: Complemental strand, 5204660 - 5204479
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| | |||||| ||  |||||||||||||||| ||||||||||||||||||||||    
T  5204660 ttatatatatcgagctggttcatgaaccaaacgagtcgaaccatactcaattcaagttcgactcatttatttaacgaacttaattttcaactcaagttcg 5204561  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    |||||||||||||  |||||||||||||| |  ||||||||||||||| | || ||||||||||||||||||||| ||||||    
T  5204560 actcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 7956274 - 7956455
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| | |||||||||||||||||||||||  ||||| |||||||| ||| |||||||||||||| |||||||||||||| ||||||||||    
T  7956274 tatatatgtcgagcttgttcatgaaccaaacgagtcgaatcatactaagttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcga 7956373  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    || |||| |||| |||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7956374 ctaattttgttcatgaaccaagtccaatgaaccaattatcgaattgagtatcgaactattttcgagttggttcggttcattg 7956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 342
Target Start/End: Original strand, 31816518 - 31816702
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||||||  || |||||||||||||||||| ||| | ||  ||||| || |||||||||||| ||||||||||||||| ||| |||||| |    
T  31816518 tatatatatcgagttgtctcgtgaaccaaacgagtcgaattatccataactcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaa 31816617  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||||||| ||||||||||||||| || |||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  31816618 ctcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagtttcgaactattttcgagttggttcggttcattgtca 31816702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 38061354 - 38061187
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||| |    
T  38061354 tggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcat 38061255  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
     || |||||||||| || |||||||| |||||| | ||| ||||||||||||||||||||||||||||    
T  38061254 aaatcaagttcaacgaatcaattatcaaatcgaatctcgcactattttcgagttggttcggttcattg 38061187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 185 - 347
Target Start/End: Original strand, 7995948 - 7996110
Alignment:
Q  185 aaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaa 284  Q
    ||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||| |||| |||||||||||||| ||||  ||||||||||||||    
T  7995948 aaacgagtcgaaccatacttaattcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaa 7996047  T
Q  285 caaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    | || ||||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||    
T  7996048 cgaatcaattatcgaatcgaatctcgaactattttcaagttggttcggttcattgtcaaccct 7996110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 39802957 - 39802776
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||| ||||||||||  ||||||||||||||| |||| |||||| ||| ||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  39802957 tatatttatcgagttgactcatgaaccaaacgaatcgagctatacatagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcga 39802858  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||| ||||||| ||||||| ||  || |  |||| ||||| |||||||||||||||||||||||| |||||||    
T  39802857 ctcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagtctcgaactattttcgagttggttcgattcattg 39802776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 158 - 347
Target Start/End: Original strand, 50447291 - 50447480
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||| ||| ||||||||||||||||||||||||   | || ||||||||| ||| |||||||||||||||| ||||||||| |  |||||||||     
T  50447291 tatatatattgagctggttcatgaaccaaacgagtcgagtcaaacatagttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcgg 50447390  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| | ||||||||| ||| ||  |||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  50447391 ctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagtctcgaactattttcgagttggtttggttcattgtcagccct 50447480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 165 - 347
Target Start/End: Complemental strand, 45581191 - 45581009
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||| ||| |||||||||||||||||||| |||  ||| | | | ||| |||||||| |||| || ||||||||||  ||||||||| ||||||||    
T  45581191 atcgagttagtttatgaaccaaacgagtcgaaccatatatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcattt 45581092  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||| ||||||||||||||| |   |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  45581091 ggttcatgaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcaagttggttcggttcattgtcagccct 45581009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 24575919 - 24576048
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |  ||||||||||||| | | ||||||||||    
T  24575919 ctcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatctcgaactatt 24576018  T
Q  318 ttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||||||||||||||||| ||||    
T  24576019 ttcgagttggttcggttcattgtcagccct 24576048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 179 - 339
Target Start/End: Original strand, 35810689 - 35810849
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||||||||| || ||||| |||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||    
T  35810689 tgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 35810788  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || ||||| ||||||||| |  |||||| |  |||||||||||||||||||||    
T  35810789 gttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattg 35810849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 15306461 - 15306624
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||||||||   || ||||| || |||||||||||||| || ||||||||||  |||||||||  |||||||||||| |||||    
T  15306461 tcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaac 15306560  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||  ||  ||||||||||||||||  ||||||||| || ||||||||||||||||||    
T  15306561 caagttcaatgaattaattatcgaatcgagttccgaactattgtcaagttggttcggttcattg 15306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 45653601 - 45653440
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||| ||||||||||||||||||  ||||||| | |||| |||||||  |||||| ||||| ||| | |||||||||| |||||||||||| |||||||    
T  45653601 atgaatcaaacgagtcgaactatatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaacca 45653502  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgt 340  Q
    |||||||| ||  |||| ||||||||||| | |||||||||||||||||| ||||||||||||    
T  45653501 agttcaacgaaataattgtcgaatcgagttttgaactattttcgagttgg-tcggttcattgt 45653440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 7016247 - 7016076
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||| |||||||||||||||  ||  ||| |||||||||||| |||   ||||| | |||| |||| | |||||||||  |||||||||||| |||||    
T  7016247 tcatgacccaaacgagtcgaaccgtatatagctcaagctcagcttattaggttaacaaacttagttttgagctcaagttcagctcatttggttcatgaac 7016148  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||||| ||||| ||||||||||| ||||| | | ||||||||||||||||||||||||| ||||    
T  7016147 caagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttggttcggttcattgtcagccct 7016076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 7596361 - 7596524
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| |||||||||||||||| |  ||||||||| |||||||| ||| ||| ||| ||||||||||| |||||||||| |||||||||||| | |||    
T  7596361 tcatgaatcaaacgagtcgaactacatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaac 7596460  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || || ||||||||||||| | |  |||||| |  |||||||||||||||||||||    
T  7596461 caagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 42916286 - 42916123
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||||||||||||||| |||||  | ||||||| |||||||| ||| ||| ||| ||||||||||| |||||||||| |||||||||||| |||||    
T  42916286 tcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaac 42916187  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || || ||||||||||||||| |  |||||  |  |||| ||||||||||||||||    
T  42916186 caagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 42916123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 46265116 - 46264953
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||||||||||||||| |||||  ||||||||| |||||||| ||| ||| ||| ||||||||||| |||||||||| ||||||| |||| |||||    
T  46265116 tcatgaaccaaacgagtcgacctatatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaac 46265017  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || || ||||||||||||||| |  |||||  |  |||| ||||||||||||||||    
T  46265016 caagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 46264953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 47603034 - 47602863
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  47603034 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 47602935  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||||| ||||    
T  47602934 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagccct 47602863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 48575247 - 48575093
Alignment:
Q  181 aaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagt 280  Q
    ||||||||| |||||||||||||||  ||||| ||| ||||||||||| |||| ||||||||| || |||||||||| || |||||||| ||||||||||    
T  48575247 aaccaaacgggtcgaactatacttaactcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagt 48575148  T
Q  281 tcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttc 335  Q
    ||||| ||  ||||| ||||| |||| ||  |||||||||||||| |||||||||    
T  48575147 tcaacgaattaattaccgaattgagtctcatactattttcgagttagttcggttc 48575093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 27076705 - 27076516
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| ||||||||||||||||||| | ||   | || ||||||||| ||| ||| |||||||||||| ||||| ||| | ||||||||||     
T  27076705 tatatatatcgagatggttcatgaaccaaacgaattgagtcaaacatagttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcgg 27076606  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||| |||| || |||||||||||| ||  |||||||||||| ||| |  |||||||||| |||||||||  |||||||||| ||||    
T  27076605 ctcatttagttcatggaccaagttcaacgaattaattatcgaatcaagtcttaaactattttcaagttggttcaattcattgtcagccct 27076516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 176 - 341
Target Start/End: Original strand, 31869562 - 31869727
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||| ||||   || ||||| || ||||||||||||||||| ||||||||||| || ||||||| |||||||||||| |||||    
T  31869562 tcatgaaccaaccgagtcgaattatatacagctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaac 31869661  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtc 341  Q
    |||||||||| |   |||| ||||||| |||  ||||||||| |||| || |||||||||||||||    
T  31869662 caagttcaacgatttaattgtcgaatcaagttccgaactattgtcgaattagttcggttcattgtc 31869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 24469989 - 24469826
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  24469989 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 24469890  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  24469889 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 24469826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 32179826 - 32179989
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  |||||| ||||  |||||    
T  32179826 tcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaac 32179925  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  32179926 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 32179989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 20349116 - 20349277
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||||||||||||| ||||  ||||||||  |||||||||||| ||||||| ||||||||||| || ||||||| ||||||||||   |||| ||    
T  20349116 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 20349215  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||| ||  ||||||||| || | | |  |||||| ||||||||||||||||||||||    
T  20349216 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 341
Target Start/End: Original strand, 19508485 - 19508661
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| |||||||||| ||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| ||| |||    
T  19508485 atcgagtcagttcgtgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttt 19508584  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtc 341  Q
    ||||| ||||||||||||||| ||| ||||| ||| ||||||  |||||| | |||||||||  |||||||||||||    
T  19508585 ggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtc 19508661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 25125054 - 25124894
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||||||  |||||| |  ||| ||||| |||||||| ||| || ||||  |||||||||| |||||||||| |||||||||||| ||||||||    
T  25125054 tgaaccaaacgagctgaactacatatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaa 25124955  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || |||||||| |||||| |  |||||| |  |||||||||||||||||||||    
T  25124954 gttcaacgaatcaattatcaaatcgaattacgaactttaatcgagttggttcggttcattg 25124894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 339
Target Start/End: Complemental strand, 21680836 - 21680665
Alignment:
Q  168 gagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggt 267  Q
    ||||| |||||||||| |||| ||| ||||||||  ||||| | | |||| || ||||  |||||| ||||||||| | |||||||||| |||||||  |    
T  21680836 gagttagttcatgaactaaacaagttgaactatatgtagtttatgttcagttcgtttagctaacgaacttaatttttagctcaagttcggctcatttcat 21680737  T
Q  268 tcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    || | ||||||||||||| |   |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  21680736 tcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctggttcggttcattg 21680665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 36419069 - 36419232
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||  ||||||| |  |||||| ||||| |||||    
T  36419069 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaac 36419168  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| ||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  36419169 caagttcgacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 36419232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 339
Target Start/End: Original strand, 6413272 - 6413370
Alignment:
Q  241 tttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||| || |||||||| |||||| | |||||||||||||||||||||||| |||||||    
T  6413272 tttcaactcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattg 6413370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 179 - 339
Target Start/End: Original strand, 42937045 - 42937205
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||||||| ||||||||| ||| ||||| |||||||| ||| || |||| ||||||||| | |||||||||| |||||||| ||| ||||||||    
T  42937045 tgaaccaaacgagttgaactatacatagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaa 42937144  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||| || || ||||| | ||||||| |  |||||| |  |||||||||||| ||||||||    
T  42937145 gttcgacgaatcaattgttgaatcgaattacgaactctaatcgagttggttcagttcattg 42937205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 23915769 - 23915606
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||||| ||||||||||||||   |  ||||| ||| ||||||||||||| || ||||||||||| || ||||||  |||||||||||| |||||    
T  23915769 tcattaaccaatcgagtcgaactatatacaactcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaac 23915670  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| |   |||| | ||||||||| ||||||| || ||||||||||||| |||||||    
T  23915669 caagttcaacgagataattgttgaatcgagtttcgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 165 - 347
Target Start/End: Complemental strand, 43087649 - 43087467
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| |||||||||||| ||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || |  ||||||||| ||| |||    
T  43087649 atcgagtcagttcgtgaaccaaacgaatcgaactatatataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgttt 43087550  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||| ||||||||||||||||||| ||||| ||| ||||||  |||||| | ||| |||||  || ||||||||||| ||||    
T  43087549 ggttcatgaaccaagttcaacaaactaattaccgagtcgagttccgaactttattcaagttgtatcagttcattgtcagccct 43087467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 347
Target Start/End: Complemental strand, 14578703 - 14578586
Alignment:
Q  230 acgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggtt 329  Q
    |||| ||||||||||| ||| |||||| |||||||||||| |||||||||||||||||| ||||| || |||||| |  |||||| |  |||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  330 cggttcattgtcatccct 347  Q
    ||||||||||||| ||||    
T  14578603 cggttcattgtcagccct 14578586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 15014321 - 15014446
Alignment:
Q  214 tcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaac 313  Q
    |||||||| ||| || | || |||||||||||||||||||||| |||||||||||| |||| ||||||| || || ||||||||||||||| |  |||||    
T  15014321 tcagctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaac 15014420  T
Q  314 tattttcgagttggttcggttcattg 339  Q
    | |  |||||||||||||||||||||    
T  15014421 tctaatcgagttggttcggttcattg 15014446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 44596527 - 44596648
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||||||||||| |||||||||||  ||||||||  |||||||||||| |||||||| |||||| |   |||| |||||||||||  | |||||||    
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactatt 44596626  T
Q  318 ttcgagttggttcggttcattg 339  Q
     |||||||||||||||||||||    
T  44596627 gtcgagttggttcggttcattg 44596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 12224684 - 12224576
Alignment:
Q  239 attttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    ||||||| |||||||||| |||||||||||| ||||||||||||||| |   |||| ||||||||| |  ||||||||| ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  339 gtcatccct 347  Q
    |||| ||||    
T  12224584 gtcagccct 12224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 347
Target Start/End: Original strand, 23916781 - 23916949
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  | | ||||| |||||||| ||| || |||| ||||||||||| |||||||| | |||||||||||  ||||||||    
T  23916781 tgaaccaaacgagtcgaactacatattgctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaa 23916880  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||  |  || ||||||||||||||| |  |||||| |  ||||||||||| |||||||||||| ||||    
T  23916881 gtttgatgaatcaattatcgaatcgaattacgaactttaatcgagttggtttggttcattgtcagccct 23916949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 36119040 - 36119210
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||| ||||| ||||  ||||||||| ||||||| |||| ||||| | ||| ||||  |||||||||||   ||||||||||| | |||    
T  36119040 tcatgaaccaaacgaatcgaattatatatagttcaagttcagctcgtttagttaacaaacttcatttg-aactcaagttcagttcatttggttcataaac 36119138  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||| || |   |||| ||||||||| | ||||||||||||  ||||||||||||||||||||| ||||    
T  36119139 caagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcattgtcagccct 36119210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 339
Target Start/End: Original strand, 7841665 - 7841753
Alignment:
Q  250 aagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||  ||||||||||| ||||||||||||||| ||  |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  7841665 aagttcggttcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattg 7841753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 7702803 - 7702966
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||| ||| ||| | ||| | ||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || | ||| |||||    
T  7702803 tcatgaacctaacgagtagaattatgcgtagcttaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaac 7702902  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  7702903 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 7702966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 20347638 - 20347797
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||||||||||||| ||||  |||| |||  |||||||||||| ||||||| ||||||||||| || ||||||| |||||||||| | |||| ||    
T  20347638 atgaaccaaacgagtcgaattata--tagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatca 20347735  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    | |||||| ||  |||| |||| || | | |  |||||| ||||||||| ||||||||||||    
T  20347736 aattcaacgaattaattgtcgagtcaaattttaaactatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 285
Target Start/End: Complemental strand, 37441358 - 37441249
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  37441358 tcattaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 37441259  T
Q  276 caagttcaac 285  Q
    ||||||||||    
T  37441258 caagttcaac 37441249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 342
Target Start/End: Original strand, 3577638 - 3577805
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaag-ttcgactcatttggttcgtgaa 274  Q
    |||| |||||| |||||||||||| |  ||| ||||| ||||||||||||||||||||  | | |||||| |||||| ||  | ||||||| ||| ||||    
T  3577638 tcataaaccaaccgagtcgaactacatatagctcaagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaa 3577737  T
Q  275 ccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    ||||||||||| |   || | |||||||||||  | ||||||| ||||||| ||||||||||||||||    
T  3577738 ccaagttcaacgagttaactgtcgaatcgagttccaaactattgtcgagttagttcggttcattgtca 3577805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 342
Target Start/End: Original strand, 15662917 - 15663083
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||||||| ||||||||||| |  ||| | ||| || | ||| ||| || |||| ||||||||||| |||||||||| |||||||||| | |||||    
T  15662917 tcatgaaccaaaagagtcgaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagctcaagttcggctcatttggtacatgaac 15663016  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    ||||||| || || ||||||| |||| || |  | |||| |  | ||||||||||||||||||||||    
T  15663017 caagttcgacgaatcaattattgaattgaattacaaactctaattgagttggttcggttcattgtca 15663083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 572502 - 572422
Alignment:
Q  262 tttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||  |||||||||||||||||| |||||||||| |||||| ||||||| | |||||||| | ||| ||||||||||    
T  572502 tttggtttttgaaccaagttcaacaaatcaattatcgagtcgagtctcgaactttgttcgagtttgctcgattcattgtca 572422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 306
Target Start/End: Complemental strand, 13645354 - 13645222
Alignment:
Q  174 gttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtga 273  Q
    |||||||||||||| |||||||||||||  ||  ||||  ||| |||||||| ||||||| |||||| || | |||||||||| ||| |||| ||| |||    
T  13645354 gttcatgaaccaaatgagtcgaactatatataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatga 13645255  T
Q  274 accaagttcaacaaaccaattatcgaatcgagt 306  Q
    |||||||| ||  ||| ||||| ||| ||||||    
T  13645254 accaagttaaatgaactaattaccgagtcgagt 13645222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 347
Target Start/End: Original strand, 30251437 - 30251564
Alignment:
Q  221 atttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactat-ttt 319  Q
    ||||| ||||||| ||||||||| | ||||||||| | |||||| |||| ||||||||  ||||| |   |||||||||||| ||| | ||||||| |||    
T  30251437 atttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaacgagttaattatcgaatcaagttttgaactatgttt 30251536  T
Q  320 cgagttggttcggttcattgtcatccct 347  Q
    ||| |||||| |||||||||||| ||||    
T  30251537 cgaattggtttggttcattgtcaaccct 30251564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 40002865 - 40002960
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaa 274  Q
    |||| |||||||||||||||| |  ||| ||||| ||| |||| ||| || |||| |||||||||||||||||||||| |||||||| ||| ||||    
T  40002865 tgaatcaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcatttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 341
Target Start/End: Original strand, 14101871 - 14101996
Alignment:
Q  217 gctcatttatttaacgagcttaatttt-caactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaacta 315  Q
    |||| ||||||||||||  |||||||| || ||||| |||  |||||||||||| ||||| ||||||||  |   |||| ||||||||||| | ||||||    
T  14101871 gctcgtttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagtttggaacta 14101970  T
Q  316 ttttcgagttggttcggttcattgtc 341  Q
    || || ||||||||||| ||||||||    
T  14101971 ttatcaagttggttcggatcattgtc 14101996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 342
Target Start/End: Original strand, 14796569 - 14796722
Alignment:
Q  189 gagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaa 288  Q
    |||||||||||||  ||||  ||| ||| |||||||||||||||| ||||||||  |  |||||||| ||| | ||||||| ||||||| ||||||| ||    
T  14796569 gagtcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaa 14796668  T
Q  289 ccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
      ||||||||| || |||  |||||| |  ||||||| | |||||| |||||||    
T  14796669 ttaattatcgagtcaagttccgaactttgatcgagttagctcggtttattgtca 14796722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 342
Target Start/End: Original strand, 14805443 - 14805596
Alignment:
Q  189 gagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaa 288  Q
    |||||||||||||  ||||  ||| ||| |||||||||||||||| ||||||||  |  |||||||| ||| | ||||||| ||||||| ||||||| ||    
T  14805443 gagtcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaa 14805542  T
Q  289 ccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
      ||||||||| || |||  |||||| |  ||||||| | |||||| |||||||    
T  14805543 ttaattatcgagtcaagttccgaactttgatcgagttagctcggtttattgtca 14805596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 51432343 - 51432266
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaac 285  Q
    ||||| |||||| |||||||||||||  |||||||||| || || ||| ||||||||||||| |||||||||| ||||    
T  51432343 tcaagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaac 51432266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 9381756 - 9381825
Alignment:
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccctt 348  Q
    ||||||| ||| ||||| ||| |||  | ||||| ||||||||||||||||||||||||||||| |||||    
T  9381756 gttcaacgaactaattaccgattcggatctcgaaatattttcgagttggttcggttcattgtcaaccctt 9381825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 11991252 - 11991341
Alignment:
Q  188 cgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||||||||  ||||| ||| |||| ||||||| ||||||| | |||||||||| | ||||||  || ||||||||| |||||||    
T  11991252 cgagtcgaactatatatagtttaagttcagttcatttagttaacgaacataattttcaatttaagttcatcttatttggttcatgaacca 11991341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 14770656 - 14770580
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaa 284  Q
    ||||| |||||||| ||| || |||| ||||||||| |  ||||||||| |||||||||||| | ||||||||||||    
T  14770656 tcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 28006238 - 28006278
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  28006238 taattattagaagaagcttgtaataaattacatattatata 28006278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 8828400 - 8828305
Alignment:
Q  174 gttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 269  Q
    ||||||||| ||||||||||||| |||   ||| ||||| ||| || ||||| |||||   ||||||||||| ||||||||| | |||||||||||    
T  8828400 gttcatgaatcaaacgagtcgaattatgtctagctcaagttcaacttatttagttaacagacttaattttcagctcaagttcaattcatttggttc 8828305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 5204721 - 5204681
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| |||||||||||||  ||||||||||    
T  5204721 taattattagaagaagcttgtaataaattagatattatata 5204681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 9381651 - 9381759
Alignment:
Q  161 atatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactc 260  Q
    |||||||||| ||  || ||||| |||||||| ||| ||||  ||||||||  |||  |||||| |||||| |  |  |||||||||||||||||| |||    
T  9381651 atatatcgagctgactcgtgaactaaacgagttgaattatatgtagttcaaattcaaatcatttttttaacaaattacattttcaactcaagttcggctc 9381750  T
Q  261 atttggttc 269  Q
    |||||||||    
T  9381751 atttggttc 9381759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 24575813 - 24575853
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    |||||||| |||||| ||||||||||||| |||||||||||    
T  24575813 taattattggaagaagcttgtaataaattacatattatata 24575853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 10 - 339
Target Start/End: Original strand, 10493787 - 10494116
Alignment:
Q  10 gatgtgggacaaattttatacatacgtttgtttaaaagtcatgtgaaggtactattaactannnnnnnncctttctctagtataacaattatcgttgatt 109  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||         |||||||||||||||| ||||||||||||||    
T  10493787 gatgtgggacaaattttatgcatatgtttgtttaaaagtcatgtgaagatactaataacttttttttttcctttctctagtataataattatcgttgatt 10493886  T
Q  110 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10493887 tttattcaaatagtaattattagaagaaacttgtaataaatttcatattatatatattgagttggttcatgaaccaaacgagtcgaactatacttagttc 10493986  T
Q  210 aagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatc 309  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| ||||    
T  10493987 aagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcgaatatc 10494086  T
Q  310 gaactattttcgagttggttcggttcattg 339  Q
     ||||||||| |||||||||||||||||||    
T  10494087 aaactatttttgagttggttcggttcattg 10494116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 157 - 347
Target Start/End: Original strand, 27196026 - 27196216
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||| ||| ||| ||||| |||||||||||||||||||||||||||||    
T  27196026 ttatatatatcgagctggttcatgaaccagacgagtcgaatcatacttagctcaagttcaactcctttatctaacgagcttaattttcaactcaagttcg 27196125  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||||| |||||||| || ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  27196126 actcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtctcgaactattttcgagttggttcggttcattgtcagccct 27196216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 39407370 - 39407536
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |    
T  39407370 tggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcat 39407469  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    ||| |||||||||| || ||||||||||||||| | ||| |||||||| ||||||||||||||||||    
T  39407470 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 27450757 - 27450590
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| | | |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |    
T  27450757 tggttcatgaaccaaacgagtcgaaccacatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcat 27450658  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| ||| |||||| || ||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  27450657 gaatcaaattcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcattg 27450590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 32945211 - 32945022
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||||||  |||||||| |||||||| ||||||| | ||  || || || |||||||||||| ||||||||||||||  ||||||||||||    
T  32945211 tatatatatcgagttgtctcatgaacaaaacgagttgaactatgcataactccagttcggctcatttatttgacgagcttaatttttgactcaagttcga 32945112  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| ||||||||||| ||| || |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  32945111 ctcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccct 32945022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 34719833 - 34719666
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||  |||| |    
T  34719833 tggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcat 34719734  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| |||||||||| || ||||||||||||| | | ||| |||||||||||||||||||| |||||||    
T  34719733 gaatcaagttcaacgaatcaattatcgaatcaaatctcgcactattttcgagttggttcgtttcattg 34719666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 26298275 - 26298442
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| ||| |||||| ||| ||| |||||||||||||||||||||||||| |||||||||| |||||||| ||||| |    
T  26298275 tggttcatgaaccaaacgagtcgaaccatatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcat 26298374  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| |||||||||| || ||||||||||||||| | ||  |||||||| |||||||||||||||||||    
T  26298375 gaatcaagttcaacgaatcaattatcgaatcgaatctcacactatttttgagttggttcggttcattg 26298442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 304
Target Start/End: Original strand, 1225301 - 1225447
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| || | |||||||||| ||||||||||||||||||||||||||||    
T  1225301 tatatatatcgagttggctcatgaaccaaacgagtcgaattatacgtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcga 1225400  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcga 304  Q
    |||||||||||| | ||| ||||||||| || |||||||||||||||    
T  1225401 ctcatttggttcataaactaagttcaacgaaacaattatcgaatcga 1225447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 26299811 - 26299977
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    ||||||||||| |||||||||||||| ||| |||||||||| |||  ||||||||||||||||||||||||| |||||||||| |||||||| ||||| |    
T  26299811 tggttcatgaatcaaacgagtcgaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcat 26299910  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    |||  ||||||||| || ||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  26299911 gaatgaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 160 - 347
Target Start/End: Original strand, 10327882 - 10328069
Alignment:
Q  160 tatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgact 259  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||| ||||| | |  ||||||||||  |||| ||||| ||| ||||||||| || |    
T  10327882 tatatatcgagttggctcatgaacaaaacgagtcgaactatacatagctcaagtttaattcatttatttgtcgagtttaatattcgactcaagtttgatt 10327981  T
Q  260 catttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||| |||| |||||||||| || |||||| |||||||||| | |||| |||||||||||||||||||||||||||| ||||    
T  10327982 catttggttcatgaatcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagccct 10328069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 19716147 - 19716309
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||| ||| ||| |||||||||| |||  ||||||||||||||||||||||||| |||| |||||||||||||| ||||| |    
T  19716147 tggttcatgaaccaaacgagtcaaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcat 19716246  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| |||||||||| || |||||||||||||     ||| ||||||||||||||||||||||||||||    
T  19716247 gaatcaagttcaacgaatcaattatcgaatc-----tcgcactattttcgagttggttcggttcattg 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 34857311 - 34857478
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| ||| |||||| ||| | | |||||||||||||||||||||||||| ||||||||||||||||||| | ||| |    
T  34857311 tggttcatgaaccaaacgagtcgaaccatatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcat 34857410  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| |||||||||| || ||||||| |||| || | ||  ||||||||||||||||||||||||||||    
T  34857411 gaatcaagttcaacgaatcaattattgaattgaatctcacactattttcgagttggttcggttcattg 34857478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 162 - 347
Target Start/End: Original strand, 36523705 - 36523894
Alignment:
Q  162 tatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgag----cttaattttcaactcaagttcga 257  Q
    ||||||||| ||||||||||||||||||| || |||||||| ||| ||||| |||||||||||||||||| |     ||||||||| || ||||||||||    
T  36523705 tatatcgagctggttcatgaaccaaacgaatcaaactatacatagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcga 36523804  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| ||||||||||||||  || | ||||||||||| ||| ||| ||| | ||||||||  ||||||||||||||||||||    
T  36523805 ctcatttggttcatgaaccaagttcaatgaatctattatcgaatcaagtctcggactttattcgagttaattcggttcattgtcatccct 36523894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 28246681 - 28246798
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatactta-gttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  28246681 tatatatatcgagctggttcatgaaccaaacgagtcgaatcatacttaagttcaagttcaactcatttatttaatgagtttaattttcaactcaagttcg 28246780  T
Q  257 actcatttggttcgtgaa 274  Q
    ||||||||||||||||||    
T  28246781 actcatttggttcgtgaa 28246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 337
Target Start/End: Original strand, 28431016 - 28431184
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||||||||||||||||||||||| | ||||  || |||||||||| ||||||| ||||||||||| ||||||||||||           |    
T  28431016 tatatatatcgagttggttcatgaaccaaacgatttgaaccttatttagttcaagttcagctcgtttatttaacgggcttaattttca-----------a 28431104  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcat 337  Q
    ||||||| |||| |||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||| |||||||    
T  28431105 ctcatttagttcatgaaccaagttcaacaattcaattatcgaatcgtgtatcgaactatttacgagttggtttggttcat 28431184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 34723829 - 34723705
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |    
T  34723829 tggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcat 34723730  T
Q  272 gaaccaagttcaacaaaccaattat 296  Q
    ||| |||||||||| || |||||||    
T  34723729 gaatcaagttcaacgaatcaattat 34723705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 3801536 - 3801373
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||| |||||| ||   ||||||||| ||| |||||||| ||||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  3801536 tcatgaacctaacgaatcgaaccatttatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaac 3801437  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||  |||||||| |||| |||| |  |||||||| ||||||||||||||||||||||    
T  3801436 caagttcaatgaaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattg 3801373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 38523033 - 38522870
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||| |||||| ||   ||||||||| |||||||||||| ||||||| ||||||||||| |||||||| | |||||||||||| |||||    
T  38523033 tcatgaacccaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaac 38522934  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||   |||||||||||| || | |  |||||||| ||||||||||||||||||||||    
T  38522933 caagttcaatggaccaattatcgagtcaaattacgaactatattcgagttggttcggttcattg 38522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 39409104 - 39409256
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |    
T  39409104 tggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcat 39409203  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    |              || ||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  39409204 g--------------aatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatt 39409256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 34724884 - 34724763
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||| || |||||||| |||||| | ||  ||||||    
T  34724884 ctcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctcacactatt 34724785  T
Q  318 ttcgagttggttcggttcattg 339  Q
    ||| ||||||||||||||||||    
T  34724784 ttcaagttggttcggttcattg 34724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 347
Target Start/End: Original strand, 41783282 - 41783464
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| ||||||||||| ||||||||| |  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| |||||||    
T  41783282 atcgagtcagttcgtgaaccaaacgggtcgaactacatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcattt 41783381  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||| ||||||||||||||| ||| ||||| ||| ||||||  |||||| | |||||||||  |||||||||||||| ||||    
T  41783382 ggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagccct 41783464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 1840857 - 1840696
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||| |||| |||||||||   |  ||||| ||||||||||||||| |||| ||||||||||| |||||||||  |||||||||||| |||||||    
T  1840857 atgaaccaaccgagccgaactatatacatctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaacca 1840758  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||| |   |||| |||||| ||||   |||||||| |||||||||||||||||||||    
T  1840757 agttcaacgagttaattgtcgaattgagttctgaactattgtcgagttggttcggttcattg 1840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 334
Target Start/End: Original strand, 3457783 - 3457956
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttca----actcaagttcgactc 260  Q
    |||||||||| ||||||||||||||||||  ||||||  ||| |||||  || |||||||||||||||| ||||||||| |    |||||||||||| ||    
T  3457783 atcgagttggctcatgaaccaaacgagtcagactatatatagctcaagtccaactcatttatttaacgaacttaatttttatttaactcaagttcgattc 3457882  T
Q  261 atttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggtt 334  Q
    |||||||||  ||| | |||||||| ||| ||||| | |||||| | || ||||||||||||||||||||||||    
T  3457883 atttggttcaagaatcgagttcaacgaactaattaccaaatcgaatctcaaactattttcgagttggttcggtt 3457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 347
Target Start/End: Original strand, 20188944 - 20189112
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||| ||||| |||||||| ||| || |||| ||||||||| |  ||||||||| |||||||||||| ||||||||    
T  20188944 tgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaa 20189043  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||| || || ||||||||||||| | |  |||||| |  |||||||| ||||||||||||||| ||||    
T  20189044 gttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttgattcggttcattgtcagccct 20189112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 165 - 336
Target Start/End: Complemental strand, 30661090 - 30660919
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  ||||||||||||||||||||||||||||  ||||||| | ||  ||||| || ||||| | |||||||||||||| || |||  |||||||    
T  30661090 atcgagtcagttcatgaaccaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcattt 30660991  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttca 336  Q
     |||| ||||| |||||||| ||| ||||||||||||||||| |  |||||  |||||||||||||| ||||    
T  30660990 agttcatgaactaagttcaataaatcaattatcgaatcgagttttaaactaaattcgagttggttcgattca 30660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 31620836 - 31621007
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||||||||||||||| ||||  ||  ||||| |||||||||||| ||||||| |||||| |||| || |||||| ||||||| ||||| |||||    
T  31620836 tcattaaccaaacgagtcgaattatatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaac 31620935  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| |||||   || |||| |||| |||| | ||||||||| ||| ||||||||||||||||||||| ||||    
T  31620936 caaattcaatggactaattgtcgagtcgaatttcgaactatattcaagttggttcggttcattgtcagccct 31621007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 342
Target Start/End: Complemental strand, 19282286 - 19282120
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| ||| ||||||||||||||   |||||||| ||||||||| || ||||||| | ||||||||| |||||||||  |||||||||||| |||||    
T  19282286 tcatgaatcaaccgagtcgaactatatacagttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaac 19282187  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||||| |   |||| ||||||  |||  ||||||||| |||||||||||| | |||||||||    
T  19282186 caagttcaacgagttaattgtcgaatgaagttccgaactattatcgagttggttcagctcattgtca 19282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 347
Target Start/End: Original strand, 1091078 - 1091262
Alignment:
Q  162 tatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactca 261  Q
    ||||||||| ||||||||||||||||  | ||||| |||   ||| ||||| ||| ||||||||||||| || |||| |||| |||||||||||||| ||    
T  1091078 tatatcgagctggttcatgaaccaaataaatcgaattatgaatagctcaagttcaactcatttatttaatgaacttattttt-aactcaagttcgaccca 1091176  T
Q  262 tttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| ||| |||||| ||||||||| ||   ||||||||||||||| | ||||| ||||  |||||||||||||||| |||| ||||    
T  1091177 tttagtttgtgaactaagttcaacgaattcattatcgaatcgagtcttgaactttttttaagttggttcggttcatcgtcagccct 1091262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 165 - 338
Target Start/End: Complemental strand, 14500889 - 14500716
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| ||||||||||||||||| |||||  ||  ||||| ||| |||||| | ||||||| |||||| || | |||||||||| ||| |||    
T  14500889 atcgagtcagttcgtgaaccaaacgagtcgagctatatataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgttt 14500790  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||  |||||| | |||||||||  ||||||||||    
T  14500789 ggttcatgaaccaagttcaacgaactaattatcgagtcgagttccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 165 - 339
Target Start/End: Original strand, 26218004 - 26218178
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| |||||||||||||||||||||||  ||  ||||| | | |||||||| ||||||| |||||| || | |||||||||| ||| |||    
T  26218004 atcgagtcagttcgtgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgttt 26218103  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||| ||||||||||||||| ||| ||||| ||| ||||||  |||||| | || ||||||  |||||||||||    
T  26218104 ggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttatttgagttgtatcggttcattg 26218178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 27906066 - 27906229
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||| || ||| ||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  27906066 tcatgagcctaacaagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 27906165  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||||||||||||||||    
T  27906166 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 27906229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 347
Target Start/End: Complemental strand, 5382936 - 5382826
Alignment:
Q  237 taattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttca 336  Q
    ||||||| |||||| ||||||||| |||||||| |||| |||||||||| ||  ||||| |||||||||| ||||||| ||||| ||||||||| |||||    
T  5382936 taattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttca 5382837  T
Q  337 ttgtcatccct 347  Q
    |||||| ||||    
T  5382836 ttgtcagccct 5382826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 342
Target Start/End: Original strand, 18880160 - 18880326
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||| ||| ||||||| ||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| || |||| |  ||| || ||||| |||||    
T  18880160 tcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaac 18880259  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  ||||||||||||||||||||||||    
T  18880260 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 18880326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 17168589 - 17168449
Alignment:
Q  204 tagttcaagctcagctcatttatttaacgagcttaattttc--aactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaat 301  Q
    ||||||||| ||| ||| ||||| ||||||  ||||||||   | || ||||||| ||||||||||| |||||||||||||||||||  || ||||||||    
T  17168589 tagttcaagttcaactcgtttatataacgaagttaattttttgagcttaagttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaat 17168490  T
Q  302 cgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    | ||| || |||||||||||||||  |||||||||||||||    
T  17168489 ctagtctcaaactattttcgagttacttcggttcattgtca 17168449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 15933128 - 15933294
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaatt---ttcaactcaagttcgactcatttggttcgtg 272  Q
    |||||||||||||||||||||| ||   ||| ||||| || ||||||||||||||||| ||||||    || | |||| |||| ||||||| ||||| ||    
T  15933128 tcatgaaccaaacgagtcgaaccatctatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatg 15933227  T
Q  273 aaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||  || | |||| |||| | |||||||||  |||||||||||||||||||||    
T  15933228 aaccaagttcaacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattg 15933294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 24535957 - 24536137
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| |||||||||| |||||| |||||| | | || ||||| ||  ||| ||| |||||||||||| ||||||||| | ||||| ||       
T  24535957 tatatatatcgagctggttcatgatccaaactagtcgagccaaacatagtttaaattcaactcgtttatttaacgaacttaattttgagctcaaatttag 24536056  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    |||||||| ||| |||||||  |||||||||  ||||||| |||  ||| | ||||||||||| ||||||||| |||||||    
T  24536057 ctcatttgattcatgaaccagattcaacaaattaattatcaaattaagtcttgaactattttcaagttggttcagttcatt 24536137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 28247469 - 28247549
Alignment:
Q  267 ttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||||||||||| || |||||||| |||| | ||||||||||||||||| ||||||||||||||||||| ||||    
T  28247469 ttcgtgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagccct 28247549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 20190756 - 20190594
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||| |||||||| |  ||| ||||| |||||||| |||   | ||| ||||||||| | |||||||||| |||||||||||| |||||    
T  20190756 tcatgaaccaaacgattcgaactacatatagctcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcatttggttcatgaac 20190657  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| |  || ||||||||||||||| |  |||||| |  | |||||||||||||||||||    
T  20190656 caagttcgatgaatcaattatcgaatcgaattacgaact-taatagagttggttcggttcattg 20190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 39414181 - 39414312
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaa-gttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagt 306  Q
    ||||| |||||||||||||||||||| ||||||||| |||| || ||||  |||||| ||||| || |||||||||||| |   |||| ||||||  |||    
T  39414181 tcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtcgaattaagt 39414280  T
Q  307 atcgaactattttcgagttggttcggttcatt 338  Q
     |||||||||| ||||||||||||||||||||    
T  39414281 ttcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 342
Target Start/End: Original strand, 31021831 - 31021997
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| |||||||| ||||||||   ||| | ||  |||||||||||| ||||| | ||||||||  | ||||| |||  |||||||||||| |||||    
T  31021831 tcatgaatcaaacgagacgaactatgtatagcttaaattcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaac 31021930  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||  ||||| |   ||||||||| ||||||  |||||||| |||||||||||||||||||||||||    
T  31021931 caaactcaacgagttaattatcgagtcgagttccgaactatattcgagttggttcggttcattgtca 31021997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 306
Target Start/End: Complemental strand, 11136173 - 11136049
Alignment:
Q  181 aaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagt 280  Q
    |||||||||||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| ||| |||||||| ||||||||||    
T  11136173 aaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagt 11136075  T
Q  281 tcaacaaaccaattatcgaatcgagt 306  Q
    ||||| ||| ||||| ||| ||||||    
T  11136074 tcaacgaactaattaccgagtcgagt 11136049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 2675987 - 2676146
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||||||||||| || |  ||||||||| |||  | | ||| || |||| ||||||||||| ||||||||||||||||||||||| |||||| |    
T  2675987 tgaaccaaacgagtcgaattacatatagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccta 2676086  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    |||| || || ||||| ||| ||||| |  |||||| |  |||| |||||| ||||||||    
T  2676087 gttcgacgaatcaattgtcggatcgaattacgaactttaatcgaattggtttggttcatt 2676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 40056497 - 40056382
Alignment:
Q  214 tcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaac 313  Q
    |||||||||||||||||||| ||||||||||| ||||| ||  ||| ||||||||| |||||||| |||||| |   |||| ||||||||| | || |||    
T  40056497 tcagctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaac 40056398  T
Q  314 tattttcgagttggtt 329  Q
    |||| |||||||||||    
T  40056397 tattatcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 24202721 - 24202836
Alignment:
Q  227 ttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttg 326  Q
    ||||||||||||||||||||||||||||||| |||||| |||| | ||| ||||  |||||    |||| |||||| ||| ||||||||||||  |||||    
T  24202721 ttaacgagcttaattttcaactcaagttcgattcatttagttcatcaacaaagtctaacaagttgattaccgaatcaagtttcgaactatttttaagttg 24202820  T
Q  327 gttcggttcattgtca 342  Q
    ||| |||||| |||||    
T  24202821 gtttggttcactgtca 24202836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 29328008 - 29328182
Alignment:
Q  176 tcatgaaccaaacgagtcgaactata----cttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    ||||||||| ||||||||||||||||    | ||| ||||| | |||||||||| ||||||| ||||||||||| ||||||| |  ||  || ||||| |    
T  29328008 tcatgaacctaacgagtcgaactatatgtacgtagctcaagttaagctcatttaattaacgaacttaattttcagctcaagtccagct-gttaggttcat 29328106  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| ||||||||||  |  || |||||| |||| | |||||||||  ||||||| |||||||||||||||| ||||    
T  29328107 gaatcaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtttgttcggttcattgtcagccct 29328182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 32157081 - 32157031
Alignment:
Q  204 tagttcaagctcagctcatttatttaacgagcttaattttcaactcaagtt 254  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  32157081 tagttcaagttcagctcatttaattaacgaacttaattttcaactcaagtt 32157031  T

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Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 30051411 - 30051511
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||||||||| |||||||||||||||||  ||||||| | ||  ||||| || ||||| | ||||||||||| ||||| ||||| ||||||    
T  30051411 atcgagtcagttcatgaactaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcatctcaaattcgattcattt 30051510  T
Q  265 g 265  Q
    |    
T  30051511 g 30051511  T

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Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 5384563 - 5384517
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatactt 204  Q
    ||||||||||||  ||  |||||||||||||||||||||||||||||    
T  5384563 tatatatatcgatctgactcatgaaccaaacgagtcgaactatactt 5384517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 40797780 - 40797961
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  40797780 tatatatgtcgagctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcga 40797879  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  40797880 ctcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaagtatcgaactatttttgagttggttcggttcattg 40797961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 9222320 - 9222141
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| | |||||||||||| ||||||||||| ||||| |||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  9222320 tatatatgtcgagcttgttcatgaaccagacgagtcgaaccatactaagttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcga 9222221  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9222220 ctcatttggt--gtgaaccaagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 157 - 347
Target Start/End: Complemental strand, 46944735 - 46944545
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |  ||||| ||  || ||||||||||||||||||| ||||||||||||||||    
T  46944735 ttatatatatcgagctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcg 46944636  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||    
T  46944635 actcatttggttcatgaaccaagttcaacgagccaattatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagccct 46944545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 164 - 339
Target Start/End: Original strand, 80453 - 80628
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  80453 tatcgagctggttcatgaaccaaacgagtcgaattatacgtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatt 80552  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||| ||||||||||||||| || |||||| |||||| | | |||||||||||||||||||| |||||||||||    
T  80553 tggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcgaactattttcgagttggatcggttcattg 80628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 339
Target Start/End: Complemental strand, 12673215 - 12673037
Alignment:
Q  161 atatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactc 260  Q
    ||||||| || |||||||||||||||||||||||||| ||||| |  ||||| ||  ||||||||||||| |||||||||||||||||||||||||||||    
T  12673215 atatatcaagctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactc 12673116  T
Q  261 atttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||| ||||||||||||||| |  ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12673115 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 48802666 - 48802476
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||||||  || |||||||||||||||||||||| | ||| ||||| || |||||||||||| ||||||||||||||| ||||||||||||    
T  48802666 tatatatatcgagttgtctcgtgaaccaaacgagtcgaactattcatagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcga 48802567  T
Q  258 ctcatttggttcgtgaaccaagttc-aacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| |||| ||||||| || ||| |||| | | |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  48802566 ctcatttggttcatgaatcaagttcaaaaaaatcaataaccaaatcgagtttcgaactattttcgagttggttcggttcattgtcagccct 48802476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 51995028 - 51995209
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| ||||||||||||||||||||||||   | || ||||||||| ||| ||| |||||||||| | ||||||||| | ||||||||||     
T  51995028 tatatatatcgagctggttcatgaaccaaacgagtcgagtcaaacatagttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcgg 51995127  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||| ||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51995128 ctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaactattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 49405825 - 49405636
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    |||||||||  |||||  || |||| ||||||||||||||||| | ||  ||||| || |||||||||||| ||||||||||||||| | ||||||||||    
T  49405825 tatatatatatagttgtctcgtgaatcaaacgagtcgaactatccataactcaagttcggctcatttatttgacgagcttaattttcgattcaagttcga 49405726  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| | ||||||||||||| || |||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  49405725 ctcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagccct 49405636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 55892175 - 55891986
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||| | ||||| ||| ||||||| ||| |||| ||||||||| ||| || ||||||    
T  55892175 tatatatatcgagctggttcatgaaccaaacgaattgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcga 55892076  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| |||||||| ||||||||||||||| ||  ||||| |||||||||| |||||||||||| |||||||||| ||||||||||| ||||    
T  55892075 ctcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactatttttgagttggttcagttcattgtcagccct 55891986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 347
Target Start/End: Original strand, 25134524 - 25134701
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| || || |||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  25134524 tatatatgtcaagctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcga 25134623  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| |||||||||| ||| ||||||||            |||| |||||||||||||||||||||||||||||||| ||||    
T  25134624 ctcatttggttcatgaaccaagtccaataaaccaat------------tatccaactattttcgagttggttcggttcattgtcagccct 25134701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 172 - 347
Target Start/End: Original strand, 1803462 - 1803632
Alignment:
Q  172 tggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 271  Q
    ||||| |||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |    
T  1803462 tggtttatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcat 1803561  T
Q  272 gaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| |||||| ||| || |||||||||||||     ||| ||| ||||||||||||||||||||||||||| ||||    
T  1803562 gaatcaagtttaacgaatcaattatcgaatc-----tcgcactcttttcgagttggttcggttcattgtcagccct 1803632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 24008093 - 24007904
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||  | |||||||||||||||||||||||||| ||| |||| ||||| ||| |||||||||||||||| ||||||||| ||||||||||  |    
T  24008093 tatatatatcaggctggttcatgaaccaaacgagtcgaaccatatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaa 24007994  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| || ||||| ||||||||||||||| || |||| ||| |||||| | |||||||||||||||||||||||  |||||||||| ||||    
T  24007993 ctcgttaggttcatgaaccaagttcaacgaatcaatcatcaaatcgaatctcgaactattttcgagttggttcaattcattgtcagccct 24007904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 187 - 347
Target Start/End: Complemental strand, 51408110 - 51407950
Alignment:
Q  187 acgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaaca 286  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||| |||| ||||||||| ||| || |||||||||||||||||| ||||||||||| |||     
T  51408110 acgagtcgaactatacttggttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacg 51408011  T
Q  287 aaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||  ||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  51408010 aattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgtcagccct 51407950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 50710960 - 50710785
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||| |||| ||| ||| || ||||||||||||||||||||||||||||||| |||||    
T  50710960 tatatatgtcgagttggttcataaaccaaacgagtcgaaccatactaagtttaagttcaacttatttatttaacgagcttaattttcaactcaatttcga 50710861  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||| ||| ||              ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  50710860 ctcatttgattcatg--------------aaccaattatcaaatcgagtatcgaactattttcgagttgattcggttcattgtcagccct 50710785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 339
Target Start/End: Original strand, 44378199 - 44378369
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| | |||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||| |||     
T  44378199 ttatatatatcgagctagttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattca 44378298  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||||||||||||||            |||||||||| || |||||||||||| ||||||||||||||||    
T  44378299 actcatttggttcatgaaccaagttcaa------------cgaatcgagtctcaaactattttcgaattggttcggttcattg 44378369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 11055398 - 11055227
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||||||||   || ||||| || ||||||||||||||||| ||||||||||  |||||||||  |||||||||||| |||||    
T  11055398 tcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaac 11055299  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||  |   ||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||||    
T  11055298 caagttcaatgagttaattatcgaatcgagttccgaactattgtcgagttggttcggttcattgtcagccct 11055227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 9469745 - 9469916
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||| |||||| ||   ||||||||| |||||||||||| | ||||| ||||||||||| |||||||| | |||||||||||| |||||    
T  9469745 tcatgaacctaacgaatcgaaccatctatagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaac 9469844  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||| | ||||||| |||| |||| |  |||||||| ||||||||||||||||||||||||| ||||    
T  9469845 caagttcaatagaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgtcagccct 9469916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 36156463 - 36156300
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||||||||| |||||||| ||| || |||| ||||||||||| |||||||||| ||||||||||||  |||||||    
T  36156463 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaa 36156364  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    ||||||| || ||||| ||||||||| |  |||||| |  ||||||||||||||||||||||||    
T  36156363 gttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgtca 36156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 28265854 - 28265682
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    ||||||| ||| |||||||||||||||||||||||| |||| | ||||| ||| ||||||| ||| |||| ||||||||| ||||||  |||   || ||    
T  28265854 tatcgagctggctcatgaaccaaacgagtcgaactacacttggctcaagttcaactcatttgtttgacgaacttaattttaaactcagattc---tcgtt 28265758  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||| ||||||||||||||| ||  ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  28265757 tggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattg 28265682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 22184473 - 22184634
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    |||||||||  |||||||||||||   |||||||| ||||||||||| |||||||| ||||||||||| |||||||||  ||| |||||||| |||||||    
T  22184473 atgaaccaactgagtcgaactatataaagttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaacca 22184572  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||| |   |||| |||||||||||  | ||||||| |||||||||||||||||||||    
T  22184573 agttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattg 22184634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 34980634 - 34980510
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||| ||| |||| |||||||||  || ||||||||||||||||| || |||||||    
T  34980634 ctcatttatttagcgagtttaattttcaactcaagttcgattcatttgattcatgaatcaagttcaatgaatcaattatcgaatcgagtctcaaactatt 34980535  T
Q  318 ttcgagttggttcggttcattgtca 342  Q
    |||||||||||| |||||| |||||    
T  34980534 ttcgagttggtttggttcactgtca 34980510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 15697255 - 15697084
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||||||| |||||  |||||||| | |||||||||| | ||||||| ||||||||| | |||||||||  || ||||||||| ||||     
T  15697255 tcatgaaccaaacgagtcggactatgtttagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaat 15697156  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||| || ||||| |||| |||||| ||||||| | |||||||||  |||||||||||||| ||||    
T  15697155 caagttcaacgaatcaattgtcgagtcgagtctcgaactttattcgagttgtctcggttcattgtcagccct 15697084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 39736633 - 39736814
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| |||||||||||  |||  |||||||  |||| ||| ||||  | | ||| |||||||||| | ||||||||| || ||||||||||    
T  39736633 tatatatatcgagctggttcatgaattaaataagtcgaatcatacatagctcaaatttaactcgtttatttaacaaacttaatttttaattcaagttcga 39736732  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    || ||||||| |||||||||| |||||| || ||||||||||||||||| || |||||||||||||||| ||| ||| ||||    
T  39736733 cttatttggtccgtgaaccaaattcaacgaatcaattatcgaatcgagtctcaaactattttcgagttgattcagtttattg 39736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 158 - 342
Target Start/End: Original strand, 27891337 - 27891520
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||   | |||||  |||||||||||||||||| |  || ||||||| |||||||||      
T  27891337 tatatatatcgagttagctcatgaaccaaccgagtcgaactatataaaattcaaattcagctcatttatttaacaaatttgattttcagctcaagttcag 27891436  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||| ||| ||||||||||||||| |   |||| |||||||||||  ||||||||| |||||||| |||| ||||||||||    
T  27891437 ctcatttg-ttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttgattcgattcattgtca 27891520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 179 - 347
Target Start/End: Complemental strand, 48339268 - 48339100
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||| | ||| |||||||| ||| || |||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  48339268 tgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaa 48339169  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||| || || ||||||||| |  |||||| |  | ||||||||||| |||||||||| ||||    
T  48339168 gttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagccct 48339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 21441549 - 21441720
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  21441549 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 21441648  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||||||||||||||||||| ||||    
T  21441649 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcaaccct 21441720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 26632904 - 26633067
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||||||   ||||| ||||||  || |||||| || ||||||||||||||||| ||||||||||| |||||||||  |||||||||||  ||| |    
T  26632904 tcatgaaccaactaagtcggactatatgtaattcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagc 26633003  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| |   |||| |||||||||||  ||||||||| |||||||||||||||||||||    
T  26633004 caagttcaacgagttaattgtcgaatcgagttacgaactattatcgagttggttcggttcattg 26633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 347
Target Start/End: Original strand, 36543777 - 36543920
Alignment:
Q  204 tagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcg 303  Q
    ||||||||| |||||||||||| ||||||| ||||||||||| |||||||| | || ||||||||| ||||||||||||||   ||||||| |||| |||    
T  36543777 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcg 36543876  T
Q  304 agtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    | |  |||||||| ||||||||||||| ||||||||||| ||||    
T  36543877 aattacgaactatattcgagttggttcagttcattgtcagccct 36543920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 164 - 331
Target Start/End: Complemental strand, 48151310 - 48151143
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    |||||||| |||||||||||||| ||| |  |||||||   |  ||||| ||  || ||||||||||||| ||||||||||| |||||||||  ||||||    
T  48151310 tatcgagtcggttcatgaaccaaccgaattaaactatatacaactcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatt 48151211  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcg 331  Q
    ||||| ||||||||||||||||||   |||| ||||||||||| |||||||||| |||||||||||||    
T  48151210 tggtttgtgaaccaagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 343
Target Start/End: Complemental strand, 25102815 - 25102602
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcat 222  Q
    ||||||||| ||||| ||||||||||||||||  ||||       ||| |||||||| |||||||||||| |||| |||||||||| ||  ||| |||||    
T  25102815 taattattaaaagaagcttgtaataaatttcacgttat-------gagctggttcataaaccaaacgagttgaaccatacttagtttaaattcaactcat 25102723  T
Q  223 ttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcga 322  Q
    ||||||||| || ||||| |||||||||| |||| |||||||||||| ||||||||   ||||||| || |||||||    | ||||||  |||||| |     
T  25102722 ttatttaacaagtttaatgttcaactcaatttcggctcatttggttcatgaaccaaacgcaacaaatcatttatcgagctaaatatcgagttatttttgt 25102623  T
Q  323 gttggttcggttcattgtcat 343  Q
    |||||||||||||||||||||    
T  25102622 gttggttcggttcattgtcat 25102602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 347
Target Start/End: Complemental strand, 19455327 - 19455159
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||| ||||||||| ||  ||| ||||| ||| ||||||||  |||| | |||||||||||||||||||||  |||||||| ||| ||||||||    
T  19455327 tgaaccaaacaagtcgaactgtatatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaa 19455228  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||| ||  |||| || |||||||| ||||||||||||||| |  | |||||||||||||| ||||    
T  19455227 gttcaacgaattaattgtcaaatcgagtttcgaactattttcgaataagctcggttcattgtcagccct 19455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 316
Target Start/End: Complemental strand, 43798395 - 43798255
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||| || ||| |||||  ||||||| ||||||||||||||||  ||||    
T  43798395 tcatgaaccaaacgagtcgaactatacatagctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaac 43798296  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactat 316  Q
    | |||||||| |   |||||||||||||||| || ||||||    
T  43798295 cgagttcaacgagttaattatcgaatcgagtctcaaactat 43798255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 204 - 347
Target Start/End: Original strand, 13455697 - 13455840
Alignment:
Q  204 tagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcg 303  Q
    ||||||||| ||| ||| |||||||||||| ||||||||| | |||||||| |||||||||||||| | || |||||||||| ||  |||||||||||||    
T  13455697 tagttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcg 13455796  T
Q  304 agtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    | | || || ||||||| ||||||||||||| ||||||| ||||    
T  13455797 aatctcaaattattttcaagttggttcggtttattgtcagccct 13455840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 52813569 - 52813740
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||| ||||||||||   || ||||| ||||||||||| |||||||| ||||||||||| || ||||||  ||| |||||||| |||||    
T  52813569 tcatgaaccaaccgaatcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaac 52813668  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||| |   |||| || ||| ||||  | ||||||| |||||||||||||||||||||||| ||||    
T  52813669 caagttcaacgagttaattgtcaaatagagtcccaaactattgtcgagttggttcggttcattgtcaaccct 52813740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 53369840 - 53370003
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  53369840 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 53369939  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| | || | |||||||||  |||||||||||||||||||||    
T  53369940 caagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttggttcggttcattg 53370003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 56224115 - 56224284
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||||| | ||||| ||||  ||||||||| ||| || ||||| |||||||  |||||||||| |||||||||| |||||||||||  | |||||    
T  56224115 atgaaccaaacaaatcgaattatatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaacca 56224214  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||| ||  |||| | || || ||| ||||||||| || |||||||||||||||||||||| ||||    
T  56224215 agttcaacgaattaattgttgagtcaagtttcgaactatgtttgagttggttcggttcattgtcagccct 56224284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 19852946 - 19853109
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  19852946 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaac 19853045  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | || ||||||  ||||||||||||| |||||||    
T  19853046 caagttcaacggattaaatatcgagtcgaatgtcaaactataatcgagttggttcgattcattg 19853109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 22721296 - 22721458
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||||||||||||||  ||  ||||| ||| |||||||||||||||| ||||||||| | || ||||| | ||| |||||||| |||||    
T  22721296 tcatgaaccaaacgagtcgaactatatataactcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaac 22721394  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||  ||| ||||| ||||||||||  |||||| | |||||||||  ||| |||||||    
T  22721395 caagttcaatgaactaattaccgaatcgagttccgaactttattcgagttgtctcgattcattg 22721458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 48977544 - 48977707
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| |||||||  |||||||||| |||| || |  |||||| ||||| |||||    
T  48977544 tcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaac 48977643  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
     ||||||||| ||  || |||||| |||| | ||||| |||  |||||||||||||||||||||    
T  48977644 gaagttcaacgaattaaatatcgagtcgaatgtcgaattataatcgagttggttcggttcattg 48977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 50605976 - 50606139
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  50605976 tcataaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 50606075  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||| ||||||||||||||||    
T  50606076 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgaattggttcggttcattg 50606139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 342
Target Start/End: Original strand, 28470787 - 28470952
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||| |||||||| || |||| | ||| ||||| ||||||||||||||||| ||  ||||||| ||  |||   | |||||||||||||| |||||    
T  28470787 tcatgaactaaacgagttgagctattcatagctcaagttcagctcatttatttaatgaaattaatttacagttcacaattgactcatttggttcatgaac 28470886  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||||| ||  ||||| |||||||||| ||| ||| ||||||||||||||  |||||||||||    
T  28470887 caagttcaacgaattaattaccgaatcgagt-tcgtacttttttcgagttggtttagttcattgtca 28470952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 48731343 - 48731182
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    |||||||||| || | |||||||   || ||||||  ||||||||||| ||||||| ||||||||| | |||||||||   | ||||||||| |||||||    
T  48731343 atgaaccaaatgaattgaactatctataattcaagtacagctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaacca 48731244  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    | |||||   ||||||| |||| |||| | ||||||||| ||||||||||||||||||||||    
T  48731243 aattcaatggaccaattgtcgagtcgaatttcgaactatattcgagttggttcggttcattg 48731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 50147087 - 50146927
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||| ||||||| |  ||  | ||| |||||||| ||| || |||| ||||||||||| ||||||| ||  ||||||||||| ||||||||    
T  50147087 tgaaccaaacgagccgaactacatataacttaagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaa 50146988  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || ||||| ||||||||| |  |||||| |  |||| ||||||||||||||||    
T  50146987 gttcaacgaatcaattgtcgaatcgaattacgaactttaatcgaattggttcggttcattg 50146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 43812226 - 43812099
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||| ||||||||||||||| |  ||||||||| |||||||| ||| || |||| |||||||||||  | ||||||| | |||||||||| ||||||||    
T  43812226 tgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaa 43812127  T
Q  279 gttcaacaaaccaattatcgaatcgagt 306  Q
    |||| || || ||||| |||||||||||    
T  43812126 gttcgacgaatcaattgtcgaatcgagt 43812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 335
Target Start/End: Complemental strand, 44791415 - 44791256
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||  |||||||||||| ||||||| |||||||||||  |||||| |  ||| || ||||| |||||    
T  44791415 tcatgaacctaacgagtcgaactatatgtagctcaaattcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaac 44791316  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttc 335  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||||||||||||    
T  44791315 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 45674803 - 45674966
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| ||| |||||||| |||||||  |||||||||| ||||||| |  ||| || ||||| |||||    
T  45674803 tcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaac 45674902  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| ||  |  |  |||||| |||| | |||||||||  |||||||||||||||||||||    
T  45674903 caagttcgacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 45674966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 49083367 - 49083240
Alignment:
Q  215 cagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaact 314  Q
    ||||||||||| |||||||  ||||||||||  |||||||| ||||||| ||||  |||||||||||||||| || ||||||||| || | | || ||||    
T  49083367 cagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagactaattatcgagtccaatttcaaact 49083268  T
Q  315 attttcgagttggttcggttcattgtca 342  Q
    ||| || |||||||||| ||||||||||    
T  49083267 attctcaagttggttcgattcattgtca 49083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 350
Target Start/End: Original strand, 7505529 - 7505671
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagta 307  Q
    ||||| ||| |||||||| |||||||  |||||||| | |||||||||| |||||||||||| |||| |||||||||| ||| ||||| ||| || |||     
T  7505529 tcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaattaccgagtcaagtt 7505628  T
Q  308 tcgaactattttcgagttggttcggttcattgtcatccctttg 350  Q
      ||||| | |||||||||  |||||||||||||| |||||||    
T  7505629 ctgaactttattcgagttgtatcggttcattgtcagccctttg 7505671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 339
Target Start/End: Original strand, 52706174 - 52706348
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| |||| ||||||||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| ||| |||    
T  52706174 atcgagtcagttcgtgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttt 52706273  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||| ||||||||||| ||| ||| ||||| ||| || |||  |||| | | |||||||||  |||||||||||    
T  52706274 ggttcatgaaccaagtttaacgaactaattaccgagtcaagttccgaattttattcgagttgtatcggttcattg 52706348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 339
Target Start/End: Complemental strand, 12789706 - 12789561
Alignment:
Q  194 gaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaat 293  Q
    ||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| |||||||||  ||| || ||||| | |||||||||||||  |  |      
T  12789706 gaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattaga 12789607  T
Q  294 tatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||| |||| | |||||||||  |||||||||||||||||||||    
T  12789606 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 12789561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 49820950 - 49821059
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| || |||| |  ||| || ||||| |||||    
T  49820950 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaac 49821049  T
Q  276 caagttcaac 285  Q
    ||||||||||    
T  49821050 caagttcaac 49821059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 347
Target Start/End: Complemental strand, 6866243 - 6866110
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagta 307  Q
    ||||| |||||||| ||| || |||| ||||||||||| |||||||||| |||||||||||| |||||||||||  || || ||||||||||||| |       
T  6866243 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaatcaa--- 6866147  T
Q  308 tcgaactattttcgagttggttcggttcattgtcatccct 347  Q
       |||| |  |||||||||||||||||||||||| ||||    
T  6866146 ---aactttaatcgagttggttcggttcattgtcaaccct 6866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 53369656 - 53369733
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagt 253  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| |||||||    
T  53369656 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagt 53369733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 4274657 - 4274565
Alignment:
Q  247 ctcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| |||||||| ||| |||| || ||||||| |   |||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  4274657 ctcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcattg 4274565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 342
Target Start/End: Complemental strand, 9874306 - 9874214
Alignment:
Q  250 aagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    ||||||| |||||||||||| || ||||| |||||| ||  |||||  ||||||| | | |||||||||| ||||||||||||||||||||||    
T  9874306 aagttcggctcatttggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtca 9874214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 5762697 - 5762611
Alignment:
Q  195 aactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttc 282  Q
    |||||||  ||||| ||||||||| ||||||||||||||  |||||||||| |||||  || ||||||||||||| ||||||||||||    
T  5762697 aactatatatagttgaagctcagc-catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaagttc 5762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 347
Target Start/End: Complemental strand, 9906496 - 9906357
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagta 307  Q
    ||||| ||| || |||||| ||| ||| |||||||||||||||||||||| ||||||   || |||| |||||||||| ||| |||||  ||||| | |     
T  9906496 tcaagttcaacttatttatataatgagtttaattttcaactcaagttcgaatcatttaagtcatgaatcaagttcaacgaactaattactgaatcaaatc 9906397  T
Q  308 tcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    || |||||||||  ||||||||  ||||||||||| ||||    
T  9906396 tcaaactatttttaagttggtttagttcattgtcagccct 9906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 32397867 - 32397704
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||| |||||||||||| ||| |  ||||||||| |||||||| ||| || |||| ||||||||| |  ||||||||| || ||||| ||| ||||||||    
T  32397867 tgaatcaaacgagtcgagctacatatagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaa 32397768  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    ||||  | || ||||| |||| |||| |  |||||| |  |||| ||||||||||| |||||||    
T  32397767 gttcggcgaatcaattgtcgagtcgaattacgaactttaatcgaattggttcggtttattgtca 32397704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 344
Target Start/End: Complemental strand, 52733827 - 52733705
Alignment:
Q  221 atttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttc 320  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||||||||||| ||||  || |||||| |   |||||||||||| | | ||||| |||| |     
T  52733827 atttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatcaaatttcgaattattatt 52733729  T
Q  321 gagttggttcggttcattgtcatc 344  Q
     ||||||||| |||||||||||||    
T  52733728 aagttggttcagttcattgtcatc 52733705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 5769258 - 5769181
Alignment:
Q  204 tagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttc 282  Q
    ||||| ||||||||| ||||||||||||||  |||||||||| ||||| ||| || |||||||||| ||||||||||||    
T  5769258 tagttgaagctcagc-catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaagttc 5769181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 9959416 - 9959470
Alignment:
Q  293 ttatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  9959416 ttatagaatcgagtttcgaactattgtcgagttggttcggttcattgtcagccct 9959470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 16742497 - 16742423
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactca 250  Q
    ||||||||||| ||| ||||||||||   |  ||||| |||||||||||||||||||| ||||||||||||||||    
T  16742497 tcatgaaccaatcgaatcgaactatatacaactcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 51408635 - 51408589
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatactt 204  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  51408635 tatatatatcgagctggctcatgaaccaaacgagtcgaactatactt 51408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 5728863 - 5728747
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    ||||||| | ||||||||| ||| ||||  |||||||  ||||| ||||||||| ||||||||||||||  |||||||| | |||||  || ||||||||    
T  5728863 atcgagtcgattcatgaactaaatgagtgaaactatatatagttgaagctcagc-catttatttaacgaatttaatttttagctcaaactcaactcattt 5728765  T
Q  265 ggttcgtgaaccaagttc 282  Q
    ||||| | ||||||||||    
T  5728764 ggttcattaaccaagttc 5728747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 24550049 - 24550137
Alignment:
Q  180 gaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtt 268  Q
    |||||||||||||||| |||||| ||  ||||| ||| |||||||| ||||| | ||||||||| | ||||||||| ||||| ||||||    
T  24550049 gaaccaaacgagtcgagctatacataactcaagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtt 24550137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 36644081 - 36643986
Alignment:
Q  251 agttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||| ||||||||||||| ||||| ||||||||  |   ||||||| ||| |||| |||||||||||| |||||||||||||| ||||||| ||||    
T  36644081 agttcaactcatttggttcatgaacaaagttcaatgagttaattatcaaat-gagtctcgaactattttggagttggttcggttgattgtcagccct 36643986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 50137407 - 50137463
Alignment:
Q  222 tttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||| | ||||||    
T  50137407 tttatttaacgagtttaattttcacctcaagttcgactcatctggttcataaaccaa 50137463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 4274768 - 4274666
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||| ||||||||| ||||||||||||||||||  ||||| | | ||||||| ||||  |||| | ||||||||| | || ||||||| | |||||    
T  4274768 atcgagttagttcatgaatcaaacgagtcgaactatatatagttaatgttcagctcgtttagctaacaaacttaatttttagctgaagttcggcccattt 4274669  T
Q  265 ggt 267  Q
    |||    
T  4274668 ggt 4274666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 338
Target Start/End: Original strand, 34718147 - 34718269
Alignment:
Q  216 agctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaacta 315  Q
    |||| |||||||||||||  |||||||||| || ||||||||||||||| |||| | |||||| |||||| |    | | || |||||||| || |||||    
T  34718147 agcttatttatttaacgaaattaattttcagctgaagttcgactcatttagttcataaaccaaattcaacgagttgactgtcaaatcgagtttcaaacta 34718246  T
Q  316 ttttcgagttggttcggttcatt 338  Q
    || |||||||  |||||||||||    
T  34718247 ttgtcgagttatttcggttcatt 34718269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 43387236 - 43387305
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttca 245  Q
    ||||||||||| ||||||||||||||   |||||||| ||||||||||| |||||||   ||||||||||    
T  43387236 tcatgaaccaaccgagtcgaactatataaagttcaagttcagctcatttgtttaacggatttaattttca 43387305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 5764702 - 5764639
Alignment:
Q  219 tcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttc 282  Q
    |||||||||||||||  |||||||||| |||||  || ||| ||||||||| ||||||||||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttc 5764639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 5766946 - 5766883
Alignment:
Q  219 tcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttc 282  Q
    |||||||||||||||  |||||||||| |||||  || ||| ||||||||| ||||||||||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttc 5766883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 41822079 - 41822153
Alignment:
Q  178 atgaaccaaacgagtcgaactatactta--gttcaagctcagctcatttatttaacgagcttaattttcaactca 250  Q
    ||||||||||||| ||||||||||  ||  ||| ||| |||||||||||| ||||| | ||||||||||||||||    
T  41822079 atgaaccaaacgaatcgaactatatatatagtttaagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 347
Target Start/End: Original strand, 13761826 - 13761938
Alignment:
Q  235 cttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggtt 334  Q
    ||||||||||| ||||| |||  |||||||||||| |||||||||| |||| |   |||| |||||||||||  |||||| | ||||| |||  || ||     
T  13761826 cttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacgagttaattgtcgaatcgagttccgaactttgttcgaattgtctcagtc 13761925  T
Q  335 cattgtcatccct 347  Q
    |||||||| ||||    
T  13761926 cattgtcagccct 13761938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 158 - 342
Target Start/End: Original strand, 26719770 - 26719954
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  26719770 tatatatatcgagctggttcatgaatcaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcga 26719869  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||||||| |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26719870 ctcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcgattcattgtca 26719954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 18250184 - 18249993
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||||| ||||||||||  |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  18250184 ttatatatatcgagctggttcatgaaccagacgagtcgaatcatacttagttcaagttcaactcatttatttaacgagcataattttcaactcaagttcg 18250085  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccctt 348  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||||| || |||||    
T  18250084 actcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgagttggttcggttcattgccagccctt 18249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 33899134 - 33898945
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||| | || ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  33899134 tatatatgtcgagctggttcatgaaccaaacgagtcgaaccatactaaatttaagttcaactcatttatttaacgagcttaattttcaactcaagttcga 33899035  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| |||||||||| |||  ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  33899034 ctcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatcgaactattttcgagttggttcggttcattgtcagccct 33898945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 21760773 - 21760584
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| ||||||||||| | |||||||||||| ||||  || ||||| ||| ||||||||||||||||| ||| ||||||||||||||||||    
T  21760773 tatatatatcgagctggttcatgaatctaacgagtcgaaccatacgaagctcaagttcaactcatttatttaacgagtttagttttcaactcaagttcga 21760674  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  21760673 ctcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtttcgaactattttcgagttggttcggttcattatcagccct 21760584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 157 - 347
Target Start/End: Complemental strand, 17025552 - 17025362
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    ||||||||||| || |||||||||||| ||||||||||||| ||||| |  ||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  17025552 ttatatatatcaagctggttcatgaacaaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcg 17025453  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||   | ||||||||||||||||||||||||||||||||| ||||    
T  17025452 actcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaaccttgaactattttcgagttggttcggttcattgtcagccct 17025362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 160 - 342
Target Start/End: Original strand, 33019259 - 33019440
Alignment:
Q  160 tatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgact 259  Q
    ||||| ||||| ||||||||||||||||| |||||||||||| | |||||||  ||| || ||| |||||||||| ||||||||||||||||||||||||    
T  33019259 tatatctcgagctggttcatgaaccaaacaagtcgaactatagtaagttcaaattcaacttatt-atttaacgagtttaattttcaactcaagttcgact 33019357  T
Q  260 catttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
     ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33019358 tatttgattcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcattgtca 33019440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 157 - 339
Target Start/End: Complemental strand, 46573803 - 46573621
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |  ||||| ||  ||||||||||||||||||||||||||||||| |||||||    
T  46573803 ttatatatatcgagctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaacttaagttcg 46573704  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||||||||||||||| |  ||||||||||||||| | ||||| |||||| |||||||||||||||||||    
T  46573703 actcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaattatttttgagttggttcggttcattg 46573621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 157 - 347
Target Start/End: Complemental strand, 35543744 - 35543557
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    ||||||||||| || |||||||||||||| ||||||||||  |||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||    
T  35543744 ttatatatatcaagctggttcatgaaccagacgagtcgaatcatacttagttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcg 35543648  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||| |||| ||||||||||||||| || |||||||||||| |||| || ||||||||||||||||||||| |||||||||| ||||    
T  35543647 actcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagtctcaaactattttcgagttggttcgattcattgtcagccct 35543557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 157 - 339
Target Start/End: Complemental strand, 18740409 - 18740227
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||| |  ||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  18740409 ttatatatatcgagctggttcatgaactaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcg 18740310  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||||||||||| ||  |  |||||||| |||||| | ||||||||||||||||||||||||||||||||    
T  18740309 actcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatctcgaactattttcgagttggttcggttcattg 18740227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 174 - 347
Target Start/End: Original strand, 36472410 - 36472583
Alignment:
Q  174 gttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtga 273  Q
    |||||||||||||||||||||||| || ||  ||||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  36472410 gttcatgaaccaaacgagtcgaaccatgctcggttcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatga 36472509  T
Q  274 accaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||||| || || ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  36472510 accaagttcaacgaatcatttatcgaatcgagtatcaagttattttcgagttggttcggttcattgtcagccct 36472583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 335
Target Start/End: Complemental strand, 49034414 - 49034237
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    |||||||||||||||||||||| || |||| |||||||| ||||  ||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||    
T  49034414 tatatatatcgagttggttcataaatcaaatgagtcgaattatatgtagttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcga 49034315  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttc 335  Q
    |||||||||||| ||||||||||||||| || |||||| |||||||| | |||||||||||||||||||| |||||||    
T  49034314 ctcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactattttcgagttggatcggttc 49034237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 347
Target Start/End: Original strand, 32356916 - 32357105
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| |||||||||||||||| |||||||  ||||| ||||| ||| ||| ||| |||| ||||||| ||| ||||||||||||| ||||     
T  32356916 tatatatatcgagctggttcatgaaccaaatgagtcgagttatacatagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcgg 32357015  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||| |||| |||| |||||||||| ||  |||||||||||||||| ||||||||||||  |||||||| |||||||||||| ||||    
T  32357016 ctcatttagttcatgaatcaagttcaacgaattaattatcgaatcgagtctcgaactatttttaagttggtttggttcattgtcagccct 32357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 158 - 300
Target Start/End: Original strand, 30919377 - 30919519
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||  || ||||| ||| ||||||||| ||||||| ||| ||||||||||||||||||    
T  30919377 tatatatatcgagctggttcatgaacctaacgagtcgaaccatacgaagctcaagttcaactcatttatctaacgagtttagttttcaactcaagttcga 30919476  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaa 300  Q
    |||||||||||||| ||||||||||||| || |||||||||||    
T  30919477 ctcatttggttcgtaaaccaagttcaacgaatcaattatcgaa 30919519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 7447849 - 7448020
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||| |||||| ||   ||||||||| ||| |||||||| ||||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  7447849 tcatgaacctaacgaatcgaaccatctatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaac 7447948  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||  |||||||| |||| |||| |   ||||||| ||||||||||||||||||||||||| ||||    
T  7447949 caagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggttcattgtcagccct 7448020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 22075038 - 22075199
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||| ||||||||||||||   || ||||| |||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||    
T  22075038 atgaaccaatcgagtcgaactatatacagatcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaacca 22075137  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
     ||||||| |   |||| |||||||||||    ||||||| |||||||||||||||||||||    
T  22075138 cgttcaacgagttaattgtcgaatcgagttctaaactattatcgagttggttcggttcattg 22075199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 334
Target Start/End: Complemental strand, 29037970 - 29037794
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| ||  ||||||| |||||||||||||| |||  ||||| ||  ||| ||||||| |||||||  ||||||||||||||||||||||     
T  29037970 tatatatctcgagctgactcatgaatcaaacgagtcgaaccatatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgt 29037871  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggtt 334  Q
    |||||||||||| ||||| ||||||| ||||  ||||| |||||||||| || ||||||||||||| |||| |||||    
T  29037870 ctcatttggttcatgaacaaagttcagcaaattaattaccgaatcgagtctcaaactattttcgagctggtacggtt 29037794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 37334251 - 37334422
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| || |||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  37334251 tcatgaacctaatgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 37334350  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||  |  || ||||||||||| | |||||||||  |||||||||||||||||||||||| ||||    
T  37334351 caagttcaacggattaaatatcgaatcgaatgtcgaactataatcgagttggttcggttcattgtcaaccct 37334422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 164 - 338
Target Start/End: Complemental strand, 23227183 - 23227009
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    ||||||||  ||||||||||||| |||||| | |||||   |  ||||| || ||||||||||||||||| ||||||||||| |||||||||  ||||||    
T  23227183 tatcgagtcagttcatgaaccaaccgagtcaagctatatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatt 23227084  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    || ||| || ||||||||||||||   |||| ||||||||||| |||||||||| |||||||||||||| |||||    
T  23227083 tgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcatt 23227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 164 - 338
Target Start/End: Complemental strand, 23236336 - 23236162
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    ||||||||  ||||||||||||| |||||| | |||||   |  ||||| || ||||||||||||||||| ||||||||||| |||||||||  ||||||    
T  23236336 tatcgagtcagttcatgaaccaaccgagtcaagctatatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatt 23236237  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    || ||| || ||||||||||||||   |||| ||||||||||| |||||||||| |||||||||||||| |||||    
T  23236236 tgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcatt 23236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 33124706 - 33124831
Alignment:
Q  214 tcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaac 313  Q
    |||||||||||||||||||| ||||||||||| ||||||||| | ||||||||||| | ||||||||||||| |   |||| ||||||||||| || |||    
T  33124706 tcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaac 33124805  T
Q  314 tattttcgagttggttcggttcattg 339  Q
    |||| |||||||||||||||||||||    
T  33124806 tattgtcgagttggttcggttcattg 33124831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 158 - 342
Target Start/End: Original strand, 31491770 - 31491954
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    |||||| |||||||||||| ||||||||||| | | || ||| || ||||||||| ||| || ||||||||||||| |||||| || |  | ||||||||    
T  31491770 tatatacatcgagttggtttatgaaccaaacaaattgagctaaacatagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcga 31491869  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    |||||||||||| ||   |||||||||| ||  |||||||||||||| | || ||||||||| |||||| |||||||||||||||    
T  31491870 ctcatttggttcatgtgtcaagttcaacgaattaattatcgaatcgaatctcaaactatttttgagttgattcggttcattgtca 31491954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 44422074 - 44421910
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaa-ttttcaactcaagttcgactcatttggttcgtgaa 274  Q
    ||||||||||| ||||||||||||||   || ||||| ||||||||||| |||||||| ||||| |||||| |||||||||  ||| |||||||| ||||    
T  44422074 tcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaa 44421975  T
Q  275 ccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||| |   |||| |||||||||||  | ||||||| |||||||||||||||||||||    
T  44421974 ccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattg 44421910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 5776302 - 5776139
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  5776302 tcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 5776203  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  5776202 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 5776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 347
Target Start/End: Complemental strand, 11595979 - 11595797
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| |||||||||| ||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| ||| |||    
T  11595979 atcgagtcagttcgtgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttt 11595880  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||| ||||||||||||||| ||| ||||| ||| ||||||  |||||| | |||||||||  |||||||||||||| ||||    
T  11595879 ggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagccct 11595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 337
Target Start/End: Original strand, 10618894 - 10619055
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| |||  |||||||||||||   || ||||| |||||||||||||||||||| ||||||||||| |||||||||  ||||||| |||| |||||    
T  10618894 tcatgaagcaacagagtcgaactatatacagctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaac 10618993  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcat 337  Q
    |||||||||| |   |||| |||||||||||  | ||||||| |||||||| ||||||||||    
T  10618994 caagttcaacgagttaattgtcgaatcgagttccaaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 33171718 - 33171543
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    ||||||||||| ||||||||||| |||||| |||||||   |  ||||| || |||||||||||||| || ||||||||| | |||||||||  ||||||    
T  33171718 tatcgagttggctcatgaaccaaccgagtcaaactatatacaactcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatt 33171619  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||| | || ||||||||||||   |||| ||  ||||||| |||||||||| |||||||||||||| ||||||    
T  33171618 tggttcataaatcaagttcaacaagataattgtcttatcgagtttcgaactattatcgagttggttcggatcattg 33171543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 188 - 339
Target Start/End: Original strand, 33935493 - 33935644
Alignment:
Q  188 cgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaa 287  Q
    ||||||||||||||   || ||||| ||| ||||||| |||||||| ||||||||||| |||||||||  ||| |||||||| ||||||||||||||| |    
T  33935493 cgagtcgaactatataaagctcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacga 33935592  T
Q  288 accaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
       ||||||||||||||||  | ||||||| ||||||||||||| |||||||    
T  33935593 gttaattatcgaatcgagtcccaaactattgtcgagttggttcgattcattg 33935644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 339
Target Start/End: Original strand, 45055690 - 45055864
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| |||| ||||||||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| ||| |||    
T  45055690 atcgagtcagttcgtgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttt 45055789  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||| ||||||||||||||| ||| ||||| ||| ||||||  |||||| | |||||||||  |||||||||||    
T  45055790 ggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 179 - 347
Target Start/End: Complemental strand, 37401735 - 37401567
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||| |||||||||| ||||| |  ||| ||||  |||||||| ||| || |||| |||||||||||||||||||| | |||||||||||| |||| |||    
T  37401735 tgaatcaaacgagtccaactacatatagctcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaa 37401636  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||| ||||| ||||||||| |  |||||| |  |||| |||||| |||||||||||| ||||    
T  37401635 gttcaacaaatcaattttcgaatcgaattacgaactctaatcgaattggtttggttcattgtcagccct 37401567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 176 - 340
Target Start/End: Original strand, 45176218 - 45176382
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||| ||||  ||| ||||| ||| |||||||| ||||||| ||||||||||| || ||||||  ||| |||||||| |||||    
T  45176218 tcatgaacctaacgagtcgaattatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaac 45176317  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgt 340  Q
    ||||||||||  |  ||||||||| |||| | || ||||||  ||||||| ||||||||||||||    
T  45176318 caagttcaacggattaattatcgagtcgaatgtcaaactataatcgagtttgttcggttcattgt 45176382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 222398 - 222235
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||||||||   || ||||| ||||||||||| ||||||||  ||||||||||  ||||||||  ||| |||||||| |||||    
T  222398 tcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaac 222299  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| |||||| |   |||| ||||||| |||  | ||||||| |||||||||||||||||||||    
T  222298 caaattcaacgagttaattgtcgaatcaagtcccaaactattgtcgagttggttcggttcattg 222235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 43052845 - 43053008
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| | ||||||||||||||||  ||| ||||| ||||||||| || ||||||| ||||||||||  ||||||| |  |||||| ||||| |||||    
T  43052845 tcatgaatctaacgagtcgaactatatgtagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaac 43052944  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  43052945 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 43053008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 347
Target Start/End: Original strand, 3942152 - 3942320
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||| ||||||| |  ||| ||||| |||||||| ||| || |||| ||||||||||| |||||||  |  ||||||||||| ||||||||    
T  3942152 tgaaccaaacgagccgaactacatatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaa 3942251  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||  || ||| | ||||||||| |  |||||| |  |||||||||||||||||||||||| ||||    
T  3942252 gttcaatgaatcaactgtcgaatcgaattacgaactttaatcgagttggttcggttcattgtcagccct 3942320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 5795108 - 5794945
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||| ||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  5795108 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 5795009  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  ||| |||||||||||||||||    
T  5795008 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgggttggttcggttcattg 5794945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 20400969 - 20401140
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||||||||||||||||||||  ||  ||||| |||||||||||| |||| || |||||| || | |||||||||   ||| | ||||| |||||    
T  20400969 tcattaaccaaacgagtcgaactatatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaac 20401068  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| |||||   || ||||| ||| |||| | ||||||||| ||||||||||||||||||||||||| ||||    
T  20401069 caaattcaatggactaattaccgagtcgaatttcgaactatattcgagttggttcggttcattgtcaaccct 20401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 36926972 - 36927135
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||| || ||||||||||||||||  ||| ||||| ||| |||||||| ||||||| ||||||||| | ||||||| | |||| || ||||| |||||    
T  36926972 tcatgagcctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaac 36927071  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||||||||||||||||    
T  36927072 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 36927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 42072056 - 42072227
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| ||||     
T  42072056 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaat 42072155  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||  |  |  ||||||||||| | || ||||||  |||||||| |||||| |||||||| ||||    
T  42072156 caagttcaacggattagatatcgaatcgaatgtcaaactataatcgagttgtttcggtacattgtcagccct 42072227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 326
Target Start/End: Complemental strand, 40480234 - 40480072
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactc-att 263  Q
    |||||||  |||| |||||||||||||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| |||  ||    
T  40480234 atcgagtcagttcgtgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttt 40480135  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttg 326  Q
    |||||| ||||||||||||||| ||| ||||| ||| ||||||  |||||| | |||||||||    
T  40480134 tggttcatgaaccaagttcaacgaactaattaccgactcgagttccgaactttattcgagttg 40480072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 344
Target Start/End: Original strand, 48634462 - 48634588
Alignment:
Q  218 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactatt 317  Q
    |||||||||||||||| ||||||||| | ||||||||| ||||||||||||| ||||||||||||||| |   |||   ||||||||||   ||||||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaatctacgaatcgagttctgaactatt 48634561  T
Q  318 ttcgagttggttcggttcattgtcatc 344  Q
     |||||||| || ||||||||||||||    
T  48634562 gtcgagttgatttggttcattgtcatc 48634588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 176 - 285
Target Start/End: Complemental strand, 48505960 - 48505851
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||| ||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  |||||| ||||| |||||    
T  48505960 tcatgtacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaac 48505861  T
Q  276 caagttcaac 285  Q
    ||||||||||    
T  48505860 caagttcaac 48505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 339
Target Start/End: Complemental strand, 28949931 - 28949767
Alignment:
Q  175 ttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaa 274  Q
    |||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||| | ||||| | |  ||| || ||||| ||||    
T  28949931 ttcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaa 28949832  T
Q  275 ccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||  |  |  |||||| |||| | |||||||||  |||||||| ||||||||||||    
T  28949831 ccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattg 28949767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 666019 - 665856
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| |||||||||| |||||  ||| ||||  |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  666019 tcatgaacctaacgagtcgagctatatgtagctcaaattcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 665920  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| || |||  |  || |||||| |||| | |||||||||  |||||||||||||||||||||    
T  665919 caaatttaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 665856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 41449795 - 41449887
Alignment:
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccctttg 350  Q
    ||||||||| || ||||||||||||||| |   |||| ||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||    
T  41449795 ctcatttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagccctttg 41449887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 3930888 - 3930725
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||| ||| ||||||| ||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| || ||    
T  3930888 tcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggac 3930789  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||| ||||||||||||    
T  3930788 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgtttcggttcattg 3930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 10096444 - 10096607
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||| |||||||| |||| ||||  ||||| ||| |||||||||||| ||| ||| ||||||||     |||||||| ||||||||||||| |||||    
T  10096444 tcatgaatcaaacgagccgaattatatgtagtttaagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaac 10096543  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| |  ||| |||| |||| |||||| ||||||||| ||||| |||  || ||||||||    
T  10096544 caagttcgatgaacaaattgtcgagtcgagtttcgaactatgttcgaattgcctcagttcattg 10096607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 26216245 - 26216354
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| ||||||| |||| ||||||| ||||||||||| ||||||| |  ||| || ||||| | |||    
T  26216245 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaac 26216344  T
Q  276 caagttcaac 285  Q
    ||||||||||    
T  26216345 caagttcaac 26216354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 287
Target Start/End: Complemental strand, 2466689 - 2466577
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga-ctcatttggttcgtgaa 274  Q
    ||||||||||| ||||||||| || |  ||||| ||| | |||||||||||||||||| || |||||||| ||||||||  | ||||||  |||||||||    
T  2466689 tcatgaaccaatcgagtcgaattacatatagtttaagtttagctcatttatttaacgaactaaattttcagctcaagttttagctcattaagttcgtgaa 2466590  T
Q  275 ccaagttcaacaa 287  Q
    |||||||||||||    
T  2466589 ccaagttcaacaa 2466577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 341
Target Start/End: Original strand, 17608688 - 17608847
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||| | ||| |||||| |  ||| ||||| ||| |||| ||| || |||| |||||||||||  ||||||||| |||||||||||| | ||||||    
T  17608688 tgaaccaaccaagttgaactacatatagatcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaa 17608787  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtc 341  Q
    |||| || || |||||   ||||||| |  |||||| || |||||||| ||||||||||||||    
T  17608788 gttcgacgaatcaatt---gaatcgaattacgaacttttatcgagttgattcggttcattgtc 17608847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 27231711 - 27231540
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||||||||||||| ||||| |  ||| | ||| || | ||| ||| || |||| |||||||||||  ||||||||| |||||||| | | ||||     
T  27231711 tcatgaaccaaacgagtcaaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagttcaagttcggctcatttgatacatgaat 27231612  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||| || || ||||||||||||||| |  |||||| |  |  || |||||||||||||||||| ||||    
T  27231611 caagttcgacgaatcaattatcgaatcgaattacgaactctaattaagctggttcggttcattgtcagccct 27231540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 37101225 - 37101148
Alignment:
Q  221 atttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcga 299  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||| |||||||| | ||||||||| |  |||||||||    
T  37101225 atttatttaacaaacttaattttcaactcaagttc-actcatttgattcgtgaatcgagttcaacagattaattatcga 37101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 269
Target Start/End: Original strand, 37250014 - 37250100
Alignment:
Q  183 ccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 269  Q
    |||||||||| |||||||| |||||||||| | |||||| ||  |||||||  |||||||||| ||||||| || ||||||||||||    
T  37250014 ccaaacgagttgaactatatttagttcaagtttagctcacttggttaacgaaattaattttcagctcaagtgcggctcatttggttc 37250100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 15434216 - 15434293
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagt 253  Q
    ||||||| | |||||||||||||| |  ||| ||||| |||||||||||| ||||||| ||||||||||| |||||||    
T  15434216 tcatgaagctaacgagtcgaactagatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagt 15434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 23237657 - 23237580
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaac 285  Q
    ||||| ||| |||||||| ||||||| ||||||| | |||||||||||| || ||| ||||| |||||||||| ||||    
T  23237657 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaac 23237580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 17025613 - 17025573
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  17025613 taattattagaagaagcttgtaataaattacatattatata 17025573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 18740470 - 18740430
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  18740470 taattattagaagaagcttgtaataaattacatattatata 18740430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 6866731 - 6866682
Alignment:
Q  298 gaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||| || ||||||||||||||| |||| ||||||||||| ||||    
T  6866731 gaatcgagtctcaaactattttcgagtttgttcagttcattgtcagccct 6866682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 339
Target Start/End: Original strand, 37106853 - 37106962
Alignment:
Q  230 acgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggtt 329  Q
    |||| ||||||||| | |||||||||| |||||||||| | | ||| |||||| || ||  |||||||||||||| |  |||||| |  | |||| ||||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  330 cggttcattg 339  Q
    ||||||||||    
T  37106953 cggttcattg 37106962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 41449712 - 41449793
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttca 245  Q
    |||||||| |||||||||||||| |||||| ||| |||   |  ||||| |||||| |||||||||||||  ||||||||||    
T  41449712 tatcgagtcggttcatgaaccaaccgagtcaaacgatatacaactcaagttcagctaatttatttaacgaatttaattttca 41449793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 46652716 - 46652647
Alignment:
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggtt 334  Q
    ||||| |||||||||| ||||| |  |||||||||||||| | ||||||||| ||||| ||||| |||||    
T  46652716 ggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaactatattcgaattggtccggtt 46652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 24128589 - 24128509
Alignment:
Q  259 tcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||| |||||||| |||||| |   |||||||||||| |||  |||| ||| |||||||  |||||||||||||    
T  24128589 tcatttggttcatgaaccaaattcaacgagttaattatcgaatcaagttccgaaatatgttcgagtgtgttcggttcattg 24128509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 46573864 - 46573824
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| |||||| |||||| |||||||||||    
T  46573864 taattattagaagaagcttgtactaaattacatattatata 46573824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 1e-69; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 20550392 - 20550211
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||  || ||||||||||||||||  ||||||||||||||| ||||||    
T  20550392 tatatatttcgagctggttcatgaatcaaacgagtcgaaccatacttagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcga 20550293  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20550292 ctcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgagtatcgaactattttcgagttggtttggttcattg 20550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 40943511 - 40943692
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  40943511 tatatatgtcgagctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcga 40943610  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||| |||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  40943611 ctcatttggttcatgaaccaagtccaatgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggtttattg 40943692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 157 - 339
Target Start/End: Original strand, 12710651 - 12710833
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |  ||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  12710651 ttatatatatcgagctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcg 12710750  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||||||||||||||| |  ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12710751 actcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 12710833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 157 - 347
Target Start/End: Complemental strand, 30662322 - 30662132
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||| |  ||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  30662322 ttatatatattgagctggttcatgaaccaaacgagtcgaactatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcg 30662223  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||| ||| ||||||||||||||| |  ||||||||||||||| | || |||||||||||||||||||||| ||||||||| ||||    
T  30662222 actcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcggctcattgtcagccct 30662132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 54432381 - 54432186
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| ||||||||||||||||||||||||||  |||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  54432381 tatatatgtcgagctggttcatgaaccaaacgagtcgaaccgtactaagttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcga 54432282  T
Q  258 ctcatttggttcgtgaaccaagttcaa-----ca---------aaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| |||| |||||||||| |||     ||         |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54432281 ctcatttagttcatgaaccaagtccaatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 54432186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 26049731 - 26049540
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||  | | ||||||||| ||||| |||||  ||||| |  ||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  26049731 ttatatatatcgaactaggtcatgaacctaacgaatcgaatcatactcaactcaagttcgactaatttatttaacgagcttaattttcaactcaagttcg 26049632  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccctt 348  Q
    ||||||||| ||| ||||||||||||||||   ||||||||||||||| | || ||||||||||||||||||||||||||||| || |||||    
T  26049631 actcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatctcaaactattttcgagttggttcggttcattgccagccctt 26049540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 15822539 - 15822370
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    |||||||||  |||||||||||||| |||||||||| || ||||| || |||||| || |||||||||||| |||||||||||||||||||||||||| |    
T  15822539 tatatatatatagttggttcatgaatcaaacgagtctaattatacgtaattcaagttcggctcatttatttgacgagcttaattttcaactcaagttcta 15822440  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttgg 327  Q
    |||| |||| || ||||||||||||||| || |||||| |||||||| | ||||||||||||||| ||||    
T  15822439 ctcaattggatcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactattttcgaattgg 15822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 9505293 - 9505130
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| |||  |||||||||  ||  ||||| |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||    
T  9505293 tcatgaaccaaccgaaccgaactatatatatctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaac 9505194  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| |   |||| |||||||||||  ||||||||| |||||||||||||||||||||    
T  9505193 caagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattg 9505130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 54393612 - 54393452
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||||||||| || ||||| |||||| |||| ||||||||||| |||||||||| |||||||||||  ||||||||    
T  54393612 tgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaa 54393513  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || ||||| ||||||||| |  |||||| |  |||||||||||||||||||||    
T  54393512 gttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattg 54393452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 52934780 - 52934943
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||||||||  ||| ||||| || ||||||||||||||||| ||||||||||  |||||||||  |||||||||||| |||||    
T  52934780 tcatgaaccaatcgagtcgaactatatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaac 52934879  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||  |   ||||||||||||||||  ||||||||| || ||||||||| ||||||||    
T  52934880 caagttcaatgagttaattatcgaatcgagttccgaactattgtcaagttggttcagttcattg 52934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 161 - 342
Target Start/End: Original strand, 26136286 - 26136467
Alignment:
Q  161 atatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactc 260  Q
    |||||||||| ||  |||||||||||||||||| |||||||  ||||| | | ||| ||||||| |||||| | | ||||||| |||||||||||| |||    
T  26136286 atatatcgagctgactcatgaaccaaacgagtcaaactatatgtagtttatgttcaactcatttgtttaacaaacataattttgaactcaagttcggctc 26136385  T
Q  261 atttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
    | || |||| | ||||||||||||||||| ||||| |||||||||| || ||||||| || |||||||| ||||||||||||    
T  26136386 acttagttcataaaccaagttcaacaaactaattaacgaatcgagtctcaaactattatcaagttggttgggttcattgtca 26136467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 347
Target Start/End: Complemental strand, 33438900 - 33438732
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    |||||||||| |||||||||| |  ||||||||  | |||||| ||| || |||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  33438900 tgaaccaaacaagtcgaactacatatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaa 33438801  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||| || ||||| ||||||||| |  | |||| |  |||||||||||||||||||||||| ||||    
T  33438800 gttcaacgaatcaattgtcgaatcgaattacaaactttaatcgagttggttcggttcattgtcagccct 33438732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 39135322 - 39135485
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||| |||||| ||   ||||| ||| |||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  39135322 tcatgaacctaacgaatcgaaccatctatagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaac 39135421  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||  |||||||| |||| |||| |   ||||||| ||||||||||||||||| ||||    
T  39135422 caagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggtttattg 39135485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 39469703 - 39469532
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||| |||||| ||   || |||||| | |||||||||| ||||||| ||||||||||| |||||||||| |||||||| ||| |||||    
T  39469703 tcatgaacctaacgaatcgaacaatctataattcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaac 39469604  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||   ||||||||||||||||| |  |||||||| ||||||||||||| ||||||| ||| ||||    
T  39469603 caagttcaatggaccaattatcgaatcgaattacgaactatattcgagttggttcagttcattatcagccct 39469532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 46293385 - 46293214
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||| |||||||||   ||||| ||| ||| |||||||| ||||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  46293385 tcatgaaccaaacgaatcgaactatttatagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaac 46293286  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||| |||||   ||||||| || | |||| | | ||||||| ||||||||| ||||||||||||||| ||||    
T  46293285 caaattcaattgaccaattgtcaagtcgaattttgaactatattcgagttgattcggttcattgtcagccct 46293214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 208 - 347
Target Start/End: Original strand, 52199429 - 52199568
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagta 307  Q
    ||||| ||||||||||| |||||||| ||||||||||| |||||||||  ||| |||||||| ||||||||||||||| ||  |||| |||||||||||     
T  52199429 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtc 52199528  T
Q  308 tcgaactattttcgagttggttcggttcattgtcatccct 347  Q
     | ||||||| ||||||||||||| |||||||||| ||||    
T  52199529 ccaaactattgtcgagttggttcgattcattgtcagccct 52199568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 32689137 - 32689308
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||  ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  32689137 tcatgaacttaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 32689236  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||||||||||||||||||| ||||    
T  32689237 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagccct 32689308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 164 - 329
Target Start/End: Complemental strand, 48731021 - 48730856
Alignment:
Q  164 tatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatt 263  Q
    |||||||||| ||||||||  |||||| |||||||||||||| || | | ||| |||||||||||| |||| ||||||||  ||| ||||| |||| |||    
T  48731021 tatcgagttgattcatgaattaaacgaatcgaactatacttaatttatgttcaactcatttatttatcgagtttaattttgcacttaagtttgacttatt 48730922  T
Q  264 tggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggtt 329  Q
    |||||| |||| |||||| ||| ||  ||||| | |||||| | ||||||||||||||||||||||    
T  48730921 tggttcatgaatcaagtttaacgaattaattagcaaatcgaatctcgaactattttcgagttggtt 48730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 25253670 - 25253833
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||  || |  ||| | ||| || ||||||||||||||||| ||||||||| | |||||||||  |||||||||||| |||||    
T  25253670 tcatgaaccaatcgagtcgagttacatatagcttaagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaac 25253769  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||    ||| |||| ||||||  | |||||| ||||||||||||||||||||||    
T  25253770 caagttcaacaagtttattgtcgagtcgagttccaaactatattcgagttggttcggttcattg 25253833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 28242551 - 28242714
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||| ||||||||||||||   || ||||| |||| |||||||||||||||  |||||||||| ||||| |||  |||||||||||| |||||    
T  28242551 tcatgaaccaaccgagtcgaactatatacagctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaac 28242650  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||| |||||| |   |||| ||||||| |||  |||| |||| |||||||| ||||||||||||    
T  28242651 caaattcaacgagttaattgtcgaatcaagttccgaattattgtcgagttgattcggttcattg 28242714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 41609856 - 41610018
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  41609856 tcatgaacccaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 41609955  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | |||||||||  ||||||||| |||||||||||    
T  41609956 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttgg-tcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 39942940 - 39942809
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagta 307  Q
    ||||| ||||||||| |||||||||| ||||||||||| |||||||||  ||||||  |||| |||||||||||||||| |  ||||  |||||||| |     
T  39942940 tcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatcgaatt 39942841  T
Q  308 tcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||  |||||||||||| ||||||||    
T  39942840 tcgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 5418635 - 5418765
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| ||||||||| |||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||||||| |||    
T  5418635 atcgagtcagttcgtgaaccaaatgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgttt 5418734  T
Q  265 ggttcgtgaaccaagttcaacaaaccaatta 295  Q
    ||||| ||||| ||||||||||||| |||||    
T  5418735 ggttcatgaactaagttcaacaaactaatta 5418765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 44574494 - 44574657
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||||||||||| |||||||||  ||| ||||| || ||||||||| | ||||| ||| ||||| |||||||||||  |||||| |||||  ||||    
T  44574494 tcatgaaccaaacgagccgaactatatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaac 44574593  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
     ||||||||| ||  ||||  ||| |||||  ||||||||| |||||||||  |||||||||||    
T  44574594 taagttcaacgaattaattgccgagtcgagcttcgaactatattcgagttgtctcggttcattg 44574657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 340
Target Start/End: Original strand, 18074582 - 18074708
Alignment:
Q  214 tcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaac 313  Q
    |||||||||||| ||||||| |||||||||||  |||| ||| |||||||| |||| |||| ||| |||||| ||  ||||||| |||||||| ||||||    
T  18074582 tcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatcaaatcgagtctcgaac 18074681  T
Q  314 tattttcgagttggttcggttcattgt 340  Q
    | | |||||||||| || |||||||||    
T  18074682 tctattcgagttggctcagttcattgt 18074708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 175 - 339
Target Start/End: Complemental strand, 19560947 - 19560783
Alignment:
Q  175 ttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaa 274  Q
    ||||||||| || |||||| |||||||  ||  ||||| || ||||||||||||||||  ||||| | | |||||||||||  ||  ||| |||| ||||    
T  19560947 ttcatgaacaaatcgagtcaaactatatataactcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaa 19560848  T
Q  275 ccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||| ||  |||| |||| |||| |  |||||||| ||||||||||||||||||||||    
T  19560847 ccaagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcattg 19560783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 49026569 - 49026641
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaa 230  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| ||| ||| |||||||||    
T  49026569 tatatatatcgggttggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcgtttatttaa 49026641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 1674629 - 1674759
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagta 307  Q
    ||||| |||||| |||||||||||   |  |||||||| || |||||| ||||||||||||| |||||||||||||||||   |||| | ||||||| |     
T  1674629 tcaagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaagataattgttgaatcgaatt 1674728  T
Q  308 tcgaactattttcgagttggttcggttcatt 338  Q
      |||||||| ||||||||||||||||||||    
T  1674729 ctgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 23206479 - 23206317
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||  ||||||||||||  ||| | ||| |||||||||||| |||| || ||||||||||| ||||||| |  ||| || ||||| |||||    
T  23206479 tcatgaacctaataagtcgaactatatgtagcttaagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaac 23206381  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
     |||||||||| |  || |||| | |||| | |||||||||  |||||||||||||||||||||    
T  23206380 aaagttcaacagattaaatatcaagtcgaatgtcgaactataatcgagttggttcggttcattg 23206317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 339
Target Start/End: Original strand, 45714730 - 45714827
Alignment:
Q  242 ttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||| ||||||||||||||||||| ||  |||| |||||||||| || ||||| ||||||||| || |||||| |  |||||||||||| ||||||||    
T  45714730 ttcagctcaagttcgactcatttgatttatgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattg 45714827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 296
Target Start/End: Original strand, 50965371 - 50965492
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaa-ttttcaactcaagttcgactcatttggttcgtgaa 274  Q
    |||||| |||| |||||||||| |||  ||| ||||| |||||||||||||||||||| ||||| |||||| ||||| |||  |||||| ||||| ||||    
T  50965371 tcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaa 50965470  T
Q  275 ccaagttcaacaaaccaattat 296  Q
    |||| || ||| ||| ||||||    
T  50965471 ccaaatttaacgaactaattat 50965492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 296
Target Start/End: Original strand, 51068506 - 51068627
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaa-ttttcaactcaagttcgactcatttggttcgtgaa 274  Q
    |||||| |||| |||||||||| |||  ||| ||||| |||||||||||||||||||| ||||| |||||| ||||| |||  |||||| ||||| ||||    
T  51068506 tcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaa 51068605  T
Q  275 ccaagttcaacaaaccaattat 296  Q
    |||| || ||| ||| ||||||    
T  51068606 ccaaatttaacgaactaattat 51068627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 265
Target Start/End: Original strand, 52199357 - 52199446
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttg 265  Q
    |||||||||||  |||||||||||||   || ||||| ||||||||||| |||||||| ||||||||||| |||||||||  ||||||||    
T  52199357 tcatgaaccaactgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcatttg 52199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 28687080 - 28687203
Alignment:
Q  216 agctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaacta 315  Q
    ||||| |||||||||||| ||||||||||| ||||| ||   | | | |||||| ||||||||||||||||| | |||||| || ||||||  ||||| |    
T  28687080 agctcgtttatttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaacaagcaaattattgagtcgagttccgaacca 28687179  T
Q  316 ttttcgagttggttcggttcattg 339  Q
    | ||||| |||||||| |||||||    
T  28687180 tattcgatttggttcgcttcattg 28687203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 18652633 - 18652517
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    ||||||| | ||||||||| ||| ||||  |||||||  ||||| ||||||||| ||||||||||||||  |||||||| | |||||  || ||||||||    
T  18652633 atcgagtcgattcatgaactaaatgagtgaaactatatatagttgaagctcagc-catttatttaacgaatttaatttttagctcaaactcaactcattt 18652535  T
Q  265 ggttcgtgaaccaagttc 282  Q
    ||||| | ||||||||||    
T  18652534 ggttcattaaccaagttc 18652517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 30743593 - 30743702
Alignment:
Q  229 aacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggt 328  Q
    ||||| ||||||| ||||||||| |||  |||||||||||| ||||||||||||||| |    ||  |||| |||||   |||||||| |||||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggt 30743692  T
Q  329 tcggttcatt 338  Q
    ||||||||||    
T  30743693 tcggttcatt 30743702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 53529759 - 53529683
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttc 255  Q
    ||||||||||||||||||| | |  ||||||||| |||||||| ||| || |||| ||||||||||| |||||||||    
T  53529759 tgaaccaaacgagtcgaacaacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttc 53529683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 333
Target Start/End: Original strand, 31589636 - 31589747
Alignment:
Q  222 tttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcg 321  Q
    |||||||||| | |||||||||||||||||||| |||| ||||||||  |||||||||| |||  ||   |||| |||||| | | | ||| |||||| |    
T  31589636 tttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaagtccaatgaattgattaccgaatcaaattttgaattattttgg 31589735  T
Q  322 agttggttcggt 333  Q
    ||||||||||||    
T  31589736 agttggttcggt 31589747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 12710590 - 12710630
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  12710590 taattattagaagaagcttgtaataaattacatattatata 12710630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 26049792 - 26049752
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  26049792 taattattagaagaagcttgtaataaattacatattatata 26049752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 306
Target Start/End: Complemental strand, 1072881 - 1072751
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||| |||||||||| |||||||||  ||  ||||| |||| |||||   ||||| | ||||||||||  |||||  || ||||||||||||| |||||    
T  1072881 tcatggaccaaacgaggcgaactatatataactcaagttcagttcattatattaacaaacttaattttcggctcaaactcaactcatttggttcatgaac 1072782  T
Q  276 caagttcaacaaaccaattatcgaatcgagt 306  Q
      ||| |||| || |||||||||| ||||||    
T  1072781 ttagtccaacgaatcaattatcgagtcgagt 1072751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 29536610 - 29536643
Alignment:
Q  221 atttatttaacgagcttaattttcaactcaagtt 254  Q
    |||||||||||||| |||||||||||||||||||    
T  29536610 atttatttaacgagtttaattttcaactcaagtt 29536643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 30662383 - 30662343
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    |||||||| |||||| ||||||||||||| |||||||||||    
T  30662383 taattattggaagaagcttgtaataaattacatattatata 30662343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 32973 - 32794
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||||| ||||| | |||||||||||| ||||||||||| ||||| |||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  32973 tatatatgtcgagcttgttcatgaaccagacgagtcgaaccatactaagttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcga 32874  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32873 ctcatttggt--gtgaaccaagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattg 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 21079 - 21226
Alignment:
Q  199 atacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcg 298  Q
    |||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||    
T  21079 atacttagctcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcg 21177  T
Q  299 aatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21178 aatcgagtctcgaactattttcgagttggttcggttcattgtcagccct 21226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 158 - 347
Target Start/End: Original strand, 14376 - 14565
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    |||||||||  |||||  || |||||||||||||||||||||| | ||  | ||| || |||||||||||| ||||||||||||||| |||||||||| |    
T  14376 tatatatatatagttgtctcgtgaaccaaacgagtcgaactatccataactaaagttcggctcatttatttgacgagcttaattttcgactcaagttcaa 14475  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
     ||||||||||| ||||||||||||||  || |||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  14476 atcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagccct 14565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 8e-46; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 158 - 335
Target Start/End: Original strand, 22563956 - 22564133
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||| || | ||||| |||| ||||||||||||||||||||||||||||    
T  22563956 tatatttatcgagttggttcatgaaccaaacgagtcgaattatatgtagttcaagttcggttcattcatttgacgagcttaattttcaactcaagttcga 22564055  T
Q  258 ctcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttc 335  Q
     | ||||||||| ||||||||||||||| || |||||| |||||| | | || || |||||||||||||| |||||||    
T  22564056 tttatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcaaattattttcgagttggatcggttc 22564133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 1091672 - 1091857
Alignment:
Q  158 tatatatatcgagttggttcatgaaccaaacgagtcga-----actatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaag 252  Q
    ||||||||||||| ||| |||||||||||| |||||||     ||||||||| | ||||| ||| ||||||| ||| |||| ||||||||| |||||| |    
T  1091672 tatatatatcgagctggctcatgaaccaaatgagtcgaatcgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaactcagg 1091771  T
Q  253 ttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    |||||||| |||||||| |||| |||||||||| ||  |||||||||||||||| || ||||||||| ||||| |||| |||||||    
T  1091772 ttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagtctcaaactatttttgagtttgttcagttcatt 1091857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 3307902 - 3308065
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||| |||||| ||||||||||||||   || ||||| || ||||||||||||||||| ||||||||||  |||||||||| |||||||||||| |||||    
T  3307902 tcataaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaac 3308001  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
     |||||| || |   |||| |||||||||||  ||||||||| |||||||||||||||||||||    
T  3308002 taagttctacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattg 3308065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 339
Target Start/End: Original strand, 39478090 - 39478181
Alignment:
Q  248 tcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||| ||||||||||||| |||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 39478181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 347
Target Start/End: Complemental strand, 33280146 - 33279978
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||| ||||| |  ||||||||| |||||||| ||| || |||| ||||||||| | ||||  |||| |||||||||||| ||||||||    
T  33280146 tgaaccaaacgagtctaactacatatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaa 33280047  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||| || || ||||||||||||| | |  |||||| |  |||||||||||||||||||||||| ||||    
T  33280046 gttcgacgaatcaattatcgaatcaaattacgaactttaatcgagttggttcggttcattgtcagccct 33279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 453451 - 453614
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| ||| |||||||| ||||||| ||||||||||||||||||| |  ||| || ||||| |||||    
T  453451 tcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 453550  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  |  |||||| |||| | |||||||||  |||||||||||||||||||||    
T  453551 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 453614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 339
Target Start/End: Original strand, 34654992 - 34655166
Alignment:
Q  165 atcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcattt 264  Q
    |||||||  |||| |||||||||||||||||||||||  ||  ||||| | | |||||||| ||||| | |||||| || | |||||||||||||| |||    
T  34654992 atcgagtcagttcgtgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgttt 34655091  T
Q  265 ggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||| ||||| ||||||||||||| ||||| ||| ||||||  |||||| | |||||||||  |||||||||||    
T  34655092 ggttcatgaactaagttcaacaaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 34655166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 12378391 - 12378491
Alignment:
Q  247 ctcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccc 346  Q
    ||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||| | ||| |||||||| ||||| |||||||||||||||| |||    
T  12378391 ctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcattgtcaaccc 12378490  T
Q  347 t 347  Q
    |    
T  12378491 t 12378491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 43384833 - 43384925
Alignment:
Q  247 ctcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||| ||||||||||||| |||||||| |||||| ||  |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  43384833 ctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 43384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 11161540 - 11161703
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||||||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  11161540 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 11161639  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||  |  || |||||| |||| | |||||||||  || |||||||| |||||||||    
T  11161640 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 339
Target Start/End: Original strand, 34516109 - 34516269
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||||||||| |||||||| ||| |  |||| ||||||||||| |||||||||| |||||||||||  |||| |||    
T  34516109 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaa 34516208  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||  || ||||| |||||| || |  |||||| |  | |||||||||||||||||||    
T  34516209 gttcaatgaatcaattgtcgaattgaattacgaactttaattgagttggttcggttcattg 34516269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 338
Target Start/End: Complemental strand, 27189222 - 27189092
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagta 307  Q
    ||||| ||| |||| ||| || |||| ||||||||||| ||||||||||||||||||||||| |||||||||||| || || ||||||||||||| | |     
T  27189222 tcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatctaatt 27189123  T
Q  308 tcgaactattttcgagttggttcggttcatt 338  Q
     |||||| |  |||||||| |||||||||||    
T  27189122 acgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 185 - 306
Target Start/End: Original strand, 23181132 - 23181253
Alignment:
Q  185 aaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaa 284  Q
    ||||||||||||||| |  ||||||||| |||||||| ||| || |||| |||||||||||  ||||||||| |||||||||||| |||||||| ||| |    
T  23181132 aaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcga 23181231  T
Q  285 caaaccaattatcgaatcgagt 306  Q
    | || ||||| |||||||||||    
T  23181232 cgaatcaattgtcgaatcgagt 23181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 174 - 339
Target Start/End: Original strand, 43967476 - 43967641
Alignment:
Q  174 gttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtga 273  Q
    |||| |||||||||||||||||||||||  ||  ||||| ||| |||||||| ||||||| |||||| || | |||||||||| ||| |||||||| |||    
T  43967476 gttcgtgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 43967575  T
Q  274 accaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||| |||||| ||| |||||  || ||||||  |||||| | ||| |||||  |||||||||||    
T  43967576 accaaattcaacgaactaattactgagtcgagttccgaactttgttcaagttgtatcggttcattg 43967641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 9412696 - 9412533
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||  |||||||||||| ||||  ||  ||||  ||||||||||||| ||||||  |||||| |||||||||||||  |||||||||||| |||||    
T  9412696 tcatgaattaaacgagtcgaattatatataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaac 9412597  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||| |    ||| |||| |||||   | ||||||  |||||||||||||||||||||    
T  9412596 caagttcaacgagttcattgtcgagtcgagctccaaactataatcgagttggttcggttcattg 9412533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 338
Target Start/End: Original strand, 32740607 - 32740769
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||| || ||||||||| ||||   || ||||| |||||| ||| || ||| || |||| ||||||  ||||||||   ||||||||||| |||||    
T  32740607 tcatgaactaaccgagtcgaattataaaaagctcaagttcagcttattaatctaatgaacttatttttcagttcaagttcagttcatttggttcatgaac 32740706  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 338  Q
    ||| |||||  |   |||| |||||| ||||  | ||||||| ||||||||||||||||||||    
T  32740707 caaattcaatgagttaattgtcgaattgagttccaaactattgtcgagttggttcggttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 10749383 - 10749310
Alignment:
Q  184 caaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcga 257  Q
    |||||||||||||||| |  ||| ||||| |||||||| ||| || |||| ||||||||||| |||||||||||    
T  10749383 caaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcga 10749310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 24854608 - 24854660
Alignment:
Q  217 gctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 269  Q
    |||| |||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  24854608 gctcgtttaattaacgagtttaattttcagctcaagttcaactcatttggttc 24854660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 339
Target Start/End: Complemental strand, 17865491 - 17865397
Alignment:
Q  245 aactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||||| ||| |||||||| ||||||||||| ||| ||| ||||| ||| ||||||  |||| | | || ||||||  |||||||||||    
T  17865491 aactcaagttcggctcgtttggttcatgaaccaagttaaacgaactaattaccgagtcgagttccgaattttatttgagttgtctcggttcattg 17865397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 13784582 - 13784622
Alignment:
Q  123 taattattagaagaaacttgtaataaatttcatattatata 163  Q
    ||||||||||||||| ||||||||||||| ||||| |||||    
T  13784582 taattattagaagaagcttgtaataaattacatataatata 13784622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 39478042 - 39478106
Alignment:
Q  160 tatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcattt 224  Q
    ||||| ||||| || |||||||| |||||||||||||| ||||  |||||||| ||| |||||||    
T  39478042 tatatgtcgagctgtttcatgaatcaaacgagtcgaaccataccaagttcaagttcaactcattt 39478106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 339
Target Start/End: Complemental strand, 958 - 788
Alignment:
Q  157 ttatatatatcgagttggttcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcg 256  Q
    |||||||||||||| | |||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||| |||     
T  958 ttatatatatcgagctagttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattca 859  T
Q  257 actcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||||||||| ||||||||||||||            |||||||||| || |||||||||||| ||||||||||||||||    
T  858 actcatttggttcatgaaccaagttcaa------------cgaatcgagtctcaaactattttcgaattggttcggttcattg 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 7480 - 7317
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    |||||||||||||||||||| |||||  | ||||||| |||||||| ||| ||| ||| ||||||||||| |||||||||| |||||||||||| |||||    
T  7480 tcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaac 7381  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    ||||||| || || ||||||||||||||| |  |||||  |  |||| ||||||||||||||||    
T  7380 caagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 7317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 339
Target Start/End: Complemental strand, 124653 - 124490
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||| ||||| |||   ||||||||  |||||||||||| ||||| | ||||||  ||| ||||||||||||||||||||||| |||||    
T  124653 tcatgaaccaaacgaatcgaaatatctatagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaac 124554  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||   ||||||| |||| || | | ||||||||| ||||||||||||||||||||||    
T  124553 caagttcaatggaccaattgtcgagtcaaatttcgaactatattcgagttggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 179 - 347
Target Start/End: Complemental strand, 26790 - 26622
Alignment:
Q  179 tgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaa 278  Q
    ||||||||||||||||||||| |  ||| | ||| |||||||| ||| || |||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  26790 tgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaa 26691  T
Q  279 gttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtcatccct 347  Q
    |||||||||| || || ||||||||| |  |||||| |  | ||||||||||| |||||||||| ||||    
T  26690 gttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagccct 26622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 339
Target Start/End: Complemental strand, 51470 - 51311
Alignment:
Q  180 gaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaag 279  Q
    |||||||| ||||||||||| || || |||||| ||| |||||||||||||| ||||||||||| || ||| ||||||||||||||||||  |||| |||    
T  51470 gaaccaaatgagtcgaactacacataattcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaag 51371  T
Q  280 ttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||| ||  | ||| |||| ||| | |||||||||||||||| | |||||||||||||    
T  51370 ttcaacgaattatttaccgaaccgaatctcgaactattttcgagctagttcggttcattg 51311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 342
Target Start/End: Original strand, 96248 - 96414
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||||||||||||||| || || ||  ||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||  |||     
T  96248 tcatgaaccaaacgagtcgaattacacataactcaagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaat 96347  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgtca 342  Q
     ||||||||  ||  | ||| |||| ||| | |||||||||||||||| | ||||||||||||||||    
T  96348 taagttcaatgaattatttaacgaaccgaatctcgaactattttcgagctagttcggttcattgtca 96414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 11439 - 11600
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||||||||||||| ||||  ||||||||  |||||||||||| ||||||| ||||||||||| || ||||||| ||||||||||   |||| ||    
T  11439 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 11538  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||| ||  ||||||||| || | | |  |||||| ||||||||||||||||||||||    
T  11539 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 9961 - 10120
Alignment:
Q  178 atgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 277  Q
    ||||||||||||||||||| ||||  |||| |||  |||||||||||| ||||||| ||||||||||| || ||||||| |||||||||| | |||| ||    
T  9961 atgaaccaaacgagtcgaattata--tagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatca 10058  T
Q  278 agttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    | |||||| ||  |||| |||| || | | |  |||||| ||||||||| ||||||||||||    
T  10059 aattcaacgaattaattgtcgagtcaaattttaaactatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 11399 - 11524
Alignment:
Q  217 gctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattatcgaatcgagtatcgaactat 316  Q
    ||||||||||||||||| ||||||||| |||| ||||||  |||||||||||| ||||| |||||| || |   |||| |||||||||||  | ||||||    
T  11399 gctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactat 11498  T
Q  317 tttcgagttggttcggttcattgtca 342  Q
    | ||||||||||||||||||||||||    
T  11499 tatcgagttggttcggttcattgtca 11524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 19264 - 19427
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 275  Q
    ||||||||| ||||||||||| ||||  ||| ||||| |||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||    
T  19264 tcatgaacctaacgagtcgaattatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 19363  T
Q  276 caagttcaacaaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattg 339  Q
    |||||||||   |  |  |||||| |||| | |||||||||  |||||||||||||||||||||    
T  19364 caagttcaaaggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 19427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 17203 - 17296
Alignment:
Q  176 tcatgaaccaaacgagtcgaactatacttagttcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 269  Q
    |||||||| |||||||| |||||| || ||  |  || ||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  17203 tcatgaacaaaacgagttgaactacacataactttagttcaactcatttatttaacgagcttaattttgaattcaagctcgactcatttggttc 17296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 324 - 247
Alignment:
Q  208 tcaagctcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaac 285  Q
    ||||| ||| |||||||| ||||||| ||||||| | |||||||||||| || ||| ||||| |||||||||| ||||    
T  324 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaac 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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