View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0618_low_26 (Length: 251)
Name: NF0618_low_26
Description: NF0618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0618_low_26 |
 | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 19394709 - 19394472
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19394709 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
19394610 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19394609 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
19394510 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttcttct |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19394509 |
ctgtagatggctttgcagttttaggattttcttcttct |
19394472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19465912 - 19465678
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
19465912 |
tcaatttctgcgaaagctatttaactttaccgtcaaagtaacatagagcttgtcacctattccatatataaaccgaaagtatgcatgcctccatttccta |
19465813 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| || || ||||| ||||||| |
|
|
| T |
19465812 |
ataagaaacaaagaaccacaaatcccccagaaacctgctgcaaatccaactcccgtccttagatacaatgattcttttatcgattcatcatcctcattct |
19465713 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttct |
235 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
19465712 |
ctgtagatggcagtgcagttttaggattttcttct |
19465678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19382453 - 19382219
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |
|
|
| T |
19382453 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatagataaaccgaaagtatgcatgcctccatttccta |
19382354 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||||||| || ||||||||||||| |
|
|
| T |
19382353 |
ataagaaataaagaaccacaaatcccccaaaaacctactccaaatccaactcccatgcctagatacaacgactctattatagattcatcatcttcattct |
19382254 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttct |
235 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
19382253 |
ctgtagatggcagtgcagttttaggattttcttct |
19382219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 18872318 - 18872553
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| |
|
|
| T |
18872318 |
tcaatatctgcgaaagctatttaactttatcatcaaagtaacatagagcttgtcacctactccatatataaaccaaaagtatgcatgcctccatttccta |
18872417 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||| | | ||||||||||| |
|
|
| T |
18872418 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatgccaagatacattgattctcttatagaagcataatcttcattct |
18872517 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
18872518 |
ttgtagatggctttgcagttttaggattttcttctt |
18872553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 17725989 - 17726214
Alignment:
| Q |
13 |
aaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaa |
112 |
Q |
| |
|
|||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||| || |||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
17725989 |
aaagctatttaactttacaattaaagtaacatagagcttgtcacctactccatcaataaaccaaaagtatgcatgcctccattttctaataagaaacaaa |
17726088 |
T |
|
| Q |
113 |
gaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggct |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| || |
|
|
| T |
17726089 |
gaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacaact |
17726188 |
T |
|
| Q |
213 |
ttgcagttttaggattttcttcttct |
238 |
Q |
| |
|
||| | |||||||||||||||||||| |
|
|
| T |
17726189 |
ttgaatttttaggattttcttcttct |
17726214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 19027218 - 19027443
Alignment:
| Q |
13 |
aaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaa |
112 |
Q |
| |
|
|||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||| || |||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
19027218 |
aaagctatttaactttacaattaaagtaacatagagcttgtcacctactccatcaataaaccaaaagtatgcatgcctccattttctaataagaaacaaa |
19027317 |
T |
|
| Q |
113 |
gaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggct |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| || |
|
|
| T |
19027318 |
gaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacaact |
19027417 |
T |
|
| Q |
213 |
ttgcagttttaggattttcttcttct |
238 |
Q |
| |
|
||| | |||||||||||||||||||| |
|
|
| T |
19027418 |
ttgaatttttaggattttcttcttct |
19027443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 19456856 - 19456621
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| | ||||||| | ||| ||| |||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
19456856 |
tcaatttctgcgaaagctatttaactttaccatcaaagttacatagaccctgttacccactccatatataacccaaaagtatgcatgcctccatttccta |
19456757 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||| ||||||| |||||||||| ||||||||| ||| |
|
|
| T |
19456756 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccaagccgagaaacattgattctcttatagagtcatcatcttcaatct |
19456657 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttcttc |
237 |
Q |
| |
|
|||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
19456656 |
ctgtggatgg-gttgcagtcttaggattttcttcttc |
19456621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18017582 - 18017348
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| ||||| | ||||| || ||| ||| ||||||||||||| |||||| |||||||||||||||| ||| |
|
|
| T |
18017582 |
tcaacttctacgaaagctatttaactttaccatcaaagttacataaagtctgttacccactccatatataaaccgaaaatatgcatgcctccattttcta |
18017483 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
18017482 |
atgagaaacaaagaaccacaaatcccccagaaacctgctgcaaagccaactcccatgcctagatacaatgattcttttatagattcatcatcctcattct |
18017383 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttct |
235 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18017382 |
ctgtagatggcattgcagttttaggattttcttct |
18017348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 19352947 - 19352717
Alignment:
| Q |
6 |
ttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataag |
105 |
Q |
| |
|
|||| ||||||||||||||||||||| | ||| | ||||| ||| ||| ||| ||||||||||||| |||||| |||||||||||||||| |||||||| |
|
|
| T |
19352947 |
ttctacgaaagctatttaactttaccattaaagttacataaagcctgttacccactccatatataaaccgaaaatatgcatgcctccattttctaataag |
19352848 |
T |
|
| Q |
106 |
aaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgta |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
19352847 |
aaacaaagaaccacaaatcccccagaaacctgctgcaaatccaactcccatgcctagatacaatgattcttttatggagtcatcaccttcattctctgtt |
19352748 |
T |
|
| Q |
206 |
gatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
|||||| ||||||| |||||||||||||||| |
|
|
| T |
19352747 |
gatggcgttgcagtcttaggattttcttctt |
19352717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 17943510 - 17943279
Alignment:
| Q |
5 |
tttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataa |
104 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||| ||||| || |||| || |||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
17943510 |
tttctgcgaaagctatttaactttacgatcaaagtaacatagagtttgtcgcccactctatcaataaaccgaaagcatgcatgcctccattttctaataa |
17943411 |
T |
|
| Q |
105 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgt |
204 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||||| ||||| || || |||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17943410 |
aaaacaaagaaccacaaatcccccaaaaacctgctgcaaatccaacccccatgccaaggtacagtgattcttttatagagtcatcatcttcattctctgt |
17943311 |
T |
|
| Q |
205 |
agatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |
|
|
| T |
17943310 |
ggacggctttgcagttttaggattttcttctt |
17943279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 18166712 - 18166481
Alignment:
| Q |
5 |
tttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataa |
104 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||| || |||| ||||||| ||||||| |||||||| ||||||| |
|
|
| T |
18166712 |
tttctgagaaagctatttaactttacgttcaaagtaacatagagcttgtcaccaactctatcaataaaccgaaagtatgcatgtctccattttctaataa |
18166613 |
T |
|
| Q |
105 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgt |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||||||||||||| ||| |
|
|
| T |
18166612 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatgcctaggtacaaccattctcttatagagtcatcatcttcattctttgt |
18166513 |
T |
|
| Q |
205 |
agatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
||| ||| |||||||||||| ||||| ||||| |
|
|
| T |
18166512 |
agacggcgttgcagttttagaatttttttctt |
18166481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 19335550 - 19335337
Alignment:
| Q |
23 |
aactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccacaaa |
122 |
Q |
| |
|
|||||||| ||||| ||||||||| ||||||||| |||| ||| | || ||||||| | |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19335550 |
aactttacgatcaaagtaacatagatcttgtcacccactctataaacaaaccgaaagtaagcatgcctccattttctaataagaaacaaagaaccacaaa |
19335451 |
T |
|
| Q |
123 |
tcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagtttt |
222 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||| ||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
19335450 |
tcccccagaaacctgctgcaaatccaactctcatccctagatacaatgattctcttaaagagtcgtcatcttcattatctgttgatggcattgcagtttt |
19335351 |
T |
|
| Q |
223 |
aggattttcttctt |
236 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19335350 |
aggattttcttctt |
19335337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 19426231 - 19426015
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||| |||| |||| || | || ||||||| |||||||| ||||||| |||||||| ||||||||||||| |
|
|
| T |
19426231 |
tttaactttacgatcaaagtaacatagatcttatcacgcactctatcaacaaaccgaaagtatgcatgcttccattttctaataaggaacaaagaaccac |
19426132 |
T |
|
| Q |
120 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagt |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
19426131 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattctttgatagagtcatcatcttcattctttgtagatggtgttgcagt |
19426032 |
T |
|
| Q |
220 |
tttaggattttcttctt |
236 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
19426031 |
tttaggattttcttctt |
19426015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 19355256 - 19355040
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||||||| |||| || | || ||||||| |||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
19355256 |
tttaactttacgatcaaagtaacatagatcttgtcacgcactctatcaacaaaccgaaagtatgcatgcctccattttctaattagaaacaaagaacggc |
19355157 |
T |
|
| Q |
120 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagt |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| | |||||||||| ||||||| |
|
|
| T |
19355156 |
aaatcccccagaaacctactgcaaatccaactcccatgcctagatacaatgattctttgatagagtcgtcatcttcattttttgtagatggcattgcagt |
19355057 |
T |
|
| Q |
220 |
tttaggattttcttctt |
236 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
19355056 |
tttaggattttcttctt |
19355040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17951383 - 17951181
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
|||| |||||| ||||||||||||||||||| ||||| | ||||||||| ||| ||| ||||||||||||| ||||||| |||||||||||||||| | | |
|
|
| T |
17951383 |
tcaacttctgcaaaagctatttaactttaccttcaaagttacatagagcctgttacccactccatatataaaccgaaagtatgcatgcctccattttcga |
17951284 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||||| ||| || ||||| ||||||| |
|
|
| T |
17951283 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatcccactcccataccaaggtacaatgattcttttagagattcatcatcctcattct |
17951184 |
T |
|
| Q |
201 |
ctg |
203 |
Q |
| |
|
||| |
|
|
| T |
17951183 |
ctg |
17951181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 33 - 238
Target Start/End: Original strand, 14894862 - 14895067
Alignment:
| Q |
33 |
tcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccacaaatcccccagaa |
132 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| || |
|
|
| T |
14894862 |
tcaaagtaacatagagcttgtcacctactccatcaataaaccgaaagtatgcatgcctccattttctaataagaaacaaagaaccagaaatcccccaaaa |
14894961 |
T |
|
| Q |
133 |
acctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagttttaggattttct |
232 |
Q |
| |
|
||||||||||||||||| |||||| || ||||||| ||||||| |||||||||| || |||||| ||| |||| | |||||| |||| |||||||||||| |
|
|
| T |
14894962 |
acctactgcaaatccaattcccatgccaagatacattgattctcttatagagtcctcgtcttcaatctgtgtaaaaggcttttcagtgttaggattttct |
14895061 |
T |
|
| Q |
233 |
tcttct |
238 |
Q |
| |
|
|||||| |
|
|
| T |
14895062 |
tcttct |
14895067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 25464610 - 25464375
Alignment:
| Q |
4 |
atttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaata |
103 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| |||||||||| ||||||| ||||||| |||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
25464610 |
atttctgcgaaagtggtttaactttacgatcaaagtaacatagagtttgtcactcactccattaataaaccgaaagtatgcatgcctccatttcctaata |
25464511 |
T |
|
| Q |
104 |
agaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttc---atcttcattct |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||| |
|
|
| T |
25464510 |
aaaaacaaagaaccacaaatcccccagaaacctattgcaaatccaactcccaagcctagatacaatgattcttttatagagtcatcgttatcttcactct |
25464411 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
|| ||| || ||||| |||||||||||||||||| |
|
|
| T |
25464410 |
ttgcagacggtgttgcatttttaggattttcttctt |
25464375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 19401275 - 19401084
Alignment:
| Q |
12 |
gaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaa |
111 |
Q |
| |
|
|||||||||||||||||||| ||||| | ||||||||| ||| ||| ||||||||||| | |||||| |||||||||||||||| ||||| |||||||| |
|
|
| T |
19401275 |
gaaagctatttaactttaccatcaaagttacatagagcctgttacccactccatatatgaaccgaaaatatgcatgcctccattttctaatgagaaacaa |
19401176 |
T |
|
| Q |
112 |
agaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctg |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| || || ||||| |||||||||||||| || |||||||||||||||| |
|
|
| T |
19401175 |
agaaccacaaatcccccagaaacctactgcaaatcccactcccatgccaaggtacaacgattcttttatagattcgtcatcttcattctctg |
19401084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 18117512 - 18117312
Alignment:
| Q |
5 |
tttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataa |
104 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| |||||||||| | |||||| |||| || | | ||||||| | |||||||||||||||||||||| |
|
|
| T |
18117512 |
tttcagcgaaagctatttaactttacgatcaaagtaacatagagatagtcacccactctatcaactaaccgaaagtacgcatgcctccatttcctaataa |
18117413 |
T |
|
| Q |
105 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgt |
204 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||| || ||||||||||||||||| |
|
|
| T |
18117412 |
gaaacatagaaccacaaatcccccagaaacctactgcaaatcccactcccatgcctagatacaatgactctcttatagattcatcatcttcattctctgt |
18117313 |
T |
|
| Q |
205 |
a |
205 |
Q |
| |
|
| |
|
|
| T |
18117312 |
a |
18117312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 19415740 - 19415509
Alignment:
| Q |
5 |
tttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataa |
104 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||| ||| | | |||| || |||| ||| ||| |||||||||| ||||| ||||||| |
|
|
| T |
19415740 |
tttctgcgaaagctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataa |
19415641 |
T |
|
| Q |
105 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgt |
204 |
Q |
| |
|
|||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| || | ||||||||||| ||| |
|
|
| T |
19415640 |
gaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcatagaatcataatcttcattctttgt |
19415541 |
T |
|
| Q |
205 |
agatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
|||||| |||||||| ||||||||||||||| |
|
|
| T |
19415540 |
tgatggcgttgcagttgtaggattttcttctt |
19415509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 180
Target Start/End: Complemental strand, 19377177 - 19377000
Alignment:
| Q |
3 |
aatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaat |
102 |
Q |
| |
|
||||||| |||| || ||||||||||| ||||| |||||||||| ||||||||||||| || |||| | ||||| |||||||||||||||||||||| |
|
|
| T |
19377177 |
aatttctttgaaacctgtttaactttacgatcaaagtaacatagagtttgtcacctactctattaataaactgaaagtatgcatgcctccatttcctaat |
19377078 |
T |
|
| Q |
103 |
aagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttat |
180 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
19377077 |
aagaaacaaagaaccgcaaatcccccagaaacctactgcaaatccaactcccatgcctagatacaatgattctcttat |
19377000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 18109978 - 18109790
Alignment:
| Q |
13 |
aaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaa |
112 |
Q |
| |
|
||||||||| ||||||||| |||| | ||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| |
|
|
| T |
18109978 |
aaagctattcaactttaccatcaatgttacatagagcctgttacccactccatatataaaacgaaagtatgcatgcctccatttcctgataacaaacaaa |
18109879 |
T |
|
| Q |
113 |
gaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctc |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
18109878 |
gaaccacaaatcccccagaaacctactgcaaatcccactcccataccaaggtacaatgattcttttatagattcatcatcctcattctc |
18109790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 19462736 - 19462536
Alignment:
| Q |
5 |
tttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataa |
104 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||| |||||| |||| || | | ||||||| | |||||||||||||||| ||||| |
|
|
| T |
19462736 |
tttctgcgaaagctatttaactttacggtcaaagtaacatagagaaagtcacccactctatcaactaaccgaaagtacgcatgcctccatttccgaataa |
19462637 |
T |
|
| Q |
105 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgt |
204 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||| || ||| ||||||| || ||||||||||||||||| |
|
|
| T |
19462636 |
gaaacaaagaaccacaaatgccccagaaacctactgcaaatcccactcccatgcctaaatacaacgactctcttatagattcatcatcttcattctctgt |
19462537 |
T |
|
| Q |
205 |
a |
205 |
Q |
| |
|
| |
|
|
| T |
19462536 |
a |
19462536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 18148369 - 18148176
Alignment:
| Q |
10 |
gcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaac |
109 |
Q |
| |
|
||||||||||||||||||||| ||| | |||||||||| | |||||| |||| || | | ||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
18148369 |
gcgaaagctatttaactttacgatcacagtaacatagagatagtcacccactctatcaactaaccgaaagtacgcatgcctccatttcctaataagaaac |
18148270 |
T |
|
| Q |
110 |
aaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctg |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||| || ||| ||||||| || |||||||||||||||| |
|
|
| T |
18148269 |
aaagaaccacaaatcccccagaaacctactgcaaatcccactcccatgcctaaatacaacgactctcttatagattcatcatcttcattctctg |
18148176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 19438497 - 19438304
Alignment:
| Q |
10 |
gcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaac |
109 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| || | ||||| ||| || | | ||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
19438497 |
gcgaaagctatttaactttactatcaaagtaacataaagatagtcacacactgtatcaactaaccgaaagtacgcatgcctccatttcctaataagaaac |
19438398 |
T |
|
| Q |
110 |
aaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctg |
203 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||| ||||||| || |||||||||||||||| |
|
|
| T |
19438397 |
atagaaccacaaatcccccaaaaacctactgcaaatccaactcccatgcctagatacaacgactctcttatagattcatcatcttcattctctg |
19438304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 16678767 - 16678535
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||| ||||| | ||||| |||||||| || ||||||| |||| || || ||| ||||||||||||||| |
|
|
| T |
16678767 |
tcaacttctgtgaaagttatttaactttaccatcaaagttacatacagcttgtcgcccactccatcaataaattgatagtatgtgtgcctccatttccta |
16678668 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| || ||||||||||||||||||| || || | ||||||| | | |
|
|
| T |
16678667 |
ataagaaacaaagaaccacaaataccccagaaacctaccgcaaaaccaactcccaagcccagatacaatgattcttttagagtatcattatcttcacttt |
16678568 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttctt |
233 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| |
|
|
| T |
16678567 |
ctgtagatggtgttgtgtttttaggattttctt |
16678535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 18105052 - 18104854
Alignment:
| Q |
5 |
tttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataa |
104 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| |||||||||| | |||||| |||| || | | ||||||| |||||||||||||||||||||||| |
|
|
| T |
18105052 |
tttcggcgaaagctatttaactttacgatcaaagtaacatagagatagtcacccactctattaactaaccgaaagtatgcatgcctccatttcctaataa |
18104953 |
T |
|
| Q |
105 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctg |
203 |
Q |
| |
|
|||||| |||||| |||||||| |||| |||||||||||||| |||||||| |||| |||||| || ||| ||||||| || |||| ||||||||||| |
|
|
| T |
18104952 |
gaaacatagaaccgaaaatccccaagaatcctactgcaaatcccactcccatgcctaaatacaacgactctcttatagattcatcattttcattctctg |
18104854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 24493226 - 24493377
Alignment:
| Q |
5 |
tttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataa |
104 |
Q |
| |
|
|||||| ||||||||| ||||| ||| ||||| | ||||||| | ||||||| ||||||| |||| ||| || | || ||||||||||||||||||| |
|
|
| T |
24493226 |
tttctgtgaaagctat--aacttcaccatcaaagttacatagatcctgtcacccactccatcgataaaccggtagtacgcgtgcctccatttcctaataa |
24493323 |
T |
|
| Q |
105 |
gaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatcc |
158 |
Q |
| |
|
|||| |||| |||||| ||| ||| ||||||||| |||| ||||||||||||| |
|
|
| T |
24493324 |
gaaataaaggaccacacatcaaccaaaaacctactccaaacccaactcccatcc |
24493377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 24496750 - 24496823
Alignment:
| Q |
91 |
ccatttcctaataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagat |
164 |
Q |
| |
|
||||||||||||| ||||||||| |||||| ||| ||||||||||| | |||||||||||||||| ||||||| |
|
|
| T |
24496750 |
ccatttcctaatacgaaacaaaggaccacagatcaaccagaaacctattccaaatccaactcccatgcctagat |
24496823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 8461126 - 8460891
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| | ||||| |||| ||| || |||||||||||||||||||| |
|
|
| T |
8461126 |
tcaatttctgcgaaatctaattaactttaccatcaaaattccatagagcttgtcacccattccatcaataaatcgatagtatgcatgcctccatttccta |
8461027 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
8461026 |
ataagaaacaaagaaccacaaatcccccaaaaacccactgcaaatccaactcccatgccaagatacaatgattctcttatagagtcatcatcttcattct |
8460927 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
8460926 |
ctgtagacggcattgcagttttaggattttcttctt |
8460891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 15537093 - 15536858
Alignment:
| Q |
1 |
tcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttccta |
100 |
Q |
| |
|
|||||||||| |||| | ||||||||||| ||||| ||||||||| ||||||||||||| || ||| ||||||| |||||||||||||||| ||| |
|
|
| T |
15537093 |
tcaatttctgtgaaacatgtttaactttacgatcaaagtaacatagatcttgtcacctactttatcagtaaaccgaaagtatgcatgcctccattttcta |
15536994 |
T |
|
| Q |
101 |
ataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
15536993 |
ataagaaacaaagaaccacaaatcccccagaaacctaccgcaaatccaactcccatccctagatacaatgattctttgttagagtcatcatcttcattct |
15536894 |
T |
|
| Q |
201 |
ctgtagatggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
|||| ||||| |||| ||||| ||||||||||||| |
|
|
| T |
15536893 |
ctgtggatggtgttgcggttttgggattttcttctt |
15536858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 2709032 - 2709250
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
|||||||||| | ||||| | ||||||||||||||||||||||||| |||| |||| || ||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
2709032 |
tttaactttatcatcaaagttacatagagcttgtcacctactccatcaataaaccgatagtatgtgttcctccatttcctaataagaaacaaaggaccac |
2709131 |
T |
|
| Q |
120 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagt |
219 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||| || || ||||| || || |||||||| |||| | |
|
|
| T |
2709132 |
aaatcccccaaaaacctactgcaaatccaactcccatgcctagatacaatgattctcttatagattcgtcgtcttcttttcctctagatggcattgcctt |
2709231 |
T |
|
| Q |
220 |
tttaggattttcttcttct |
238 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
2709232 |
tttatgattttcttcttct |
2709250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 13665395 - 13665623
Alignment:
| Q |
8 |
ctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaa |
107 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||| |||||| ||||| || |||| || | || |||||||||||||||||||||||| |||||||||| |
|
|
| T |
13665395 |
ctgcgaaagctatttaactttaccatcaaagtaatatagagattgtcgcccactctatcaaaaaaccgaaagcatgcatgcctccattttctaataagaa |
13665494 |
T |
|
| Q |
108 |
acaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtaga |
207 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||| ||||| || || | ||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
13665495 |
acaaagaaccacatatcccccagaaacctgctgcaaatccaacccccatgccaaggttcaatgattcttttatagagtcgtcatcttcattctttgtaga |
13665594 |
T |
|
| Q |
208 |
tggctttgcagttttaggattttcttctt |
236 |
Q |
| |
|
||| |||||||| ||||||||||||||| |
|
|
| T |
13665595 |
tggtgttgcagttctaggattttcttctt |
13665623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 238
Target Start/End: Complemental strand, 22127 - 21909
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||| |||| || |||| |||| || |||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
22127 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccaa |
22028 |
T |
|
| Q |
120 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagt |
219 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||| || ||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
22027 |
aaatcccccagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagt |
21928 |
T |
|
| Q |
220 |
tttaggattttcttcttct |
238 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
21927 |
tttaggattttcttcttct |
21909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 235
Target Start/End: Original strand, 2029 - 2244
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||| |||| || |||| |||| || |||||||||||||||| |||| |||||||||||||| |
|
|
| T |
2029 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
2128 |
T |
|
| Q |
120 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagt |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||| || ||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
2129 |
aaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagt |
2228 |
T |
|
| Q |
220 |
tttaggattttcttct |
235 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
2229 |
tataggattttcttct |
2244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 2558 - 2777
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||| |||| || |||| |||| || |||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
2558 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccaa |
2657 |
T |
|
| Q |
120 |
aaat-cccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcag |
218 |
Q |
| |
|
|||| |||||||||||| |||||||||||||| ||||| || ||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
2658 |
aaatacccccagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcag |
2757 |
T |
|
| Q |
219 |
ttttaggattttcttcttct |
238 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
2758 |
ttttaggattttcttcttct |
2777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 12042 - 11826
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||| |||| || |||| |||| || |||||||||||||||| |||| |||||||||||||| |
|
|
| T |
12042 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
11943 |
T |
|
| Q |
120 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagt |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||| || ||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
11942 |
aaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagt |
11843 |
T |
|
| Q |
220 |
tttaggattttcttctt |
236 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
11842 |
tttaggattttcttctt |
11826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 6944 - 6729
Alignment:
| Q |
20 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
119 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||| |||| || |||| |||| || |||||||||||||||| |||| |||||||||||||| |
|
|
| T |
6944 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
6845 |
T |
|
| Q |
120 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagt |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||| || ||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
6844 |
aaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagt |
6745 |
T |
|
| Q |
220 |
tttaggattttcttct |
235 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
6744 |
tataggattttcttct |
6729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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