View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0619_low_21 (Length: 382)
Name: NF0619_low_21
Description: NF0619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0619_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 43083013 - 43083289
Alignment:
| Q |
1 |
ttattctcctattttcattttgtacggattcaaaaaagagtttctacgtactctctgcaacactttttcaacattttccagacttaccaaaccatgaaac |
100 |
Q |
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| T |
43083013 |
ttattctcctattttcattttgtacggattcaaaaaagagtttctacgtactctctgcaacactttttcaacattttccagacttaccaaaccatgaaac |
43083112 |
T |
|
| Q |
101 |
ataccaacattttgtactatgactatcgaagaagccacttgcgccttaatcaaaactacttcaccaaacacactcagaacgttttatacaaaggaaactg |
200 |
Q |
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| T |
43083113 |
ataccaacagttcgtactatgactatccaagaagccacttgcgccttaatcaaaactacttcaccaaacacactcagaacgttttatacaaaggaaactg |
43083212 |
T |
|
| Q |
201 |
ctaataatatctttaggatattcattaataaaatatggatgtgatgtgtataaaaatagtgtattcagagaaggtgt |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43083213 |
ctaataatatctttaggatattcattaataaaatatggatgtgatgtgtataaaaatagtgtattcagagaaggtgt |
43083289 |
T |
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