View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0619_low_39 (Length: 287)
Name: NF0619_low_39
Description: NF0619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0619_low_39 |
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Alignment Details
Target: chr4 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 56226721 - 56226870
Alignment:
| Q |
1 |
tcacgtgataaacaacagttcatataggactaatatactcaaaaactacaatggaattcttttctgttgatgctaattcctataaatattcttttgaaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56226721 |
tcacgtgataaacaacagttcatataggactaatatactcaaaaactacaatggaattcttttctgttgatgctaattcctataaatattcttttgaaat |
56226820 |
T |
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| Q |
101 |
taatttcctaattgaattcttcgacggttattgtcaaaatcccttttcat |
150 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
56226821 |
taatttcctaattgaattcctcgacggttattgtcaaaatcccttttcat |
56226870 |
T |
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