View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0620_low_1 (Length: 610)

Name: NF0620_low_1
Description: NF0620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0620_low_1
NF0620_low_1
[»] chr3 (62 HSPs)
chr3 (1-599)||(29369268-29369865)
chr3 (28-72)||(9264153-9264197)
chr3 (28-72)||(9264567-9264611)
chr3 (28-71)||(49477528-49477571)
chr3 (26-72)||(50692519-50692565)
chr3 (28-72)||(4191189-4191233)
chr3 (28-72)||(50692316-50692360)
chr3 (28-72)||(51338508-51338552)
chr3 (28-72)||(53640239-53640283)
chr3 (28-72)||(54495524-54495568)
chr3 (2-72)||(19984444-19984512)
chr3 (30-72)||(25627990-25628032)
chr3 (26-72)||(35015478-35015524)
chr3 (26-72)||(40926447-40926493)
chr3 (26-72)||(44145459-44145505)
chr3 (33-78)||(25578752-25578797)
chr3 (27-72)||(40230500-40230545)
chr3 (28-72)||(51642702-51642747)
chr3 (28-72)||(5440570-5440614)
chr3 (28-72)||(9264360-9264404)
chr3 (28-72)||(10758835-10758879)
chr3 (28-72)||(22339734-22339778)
chr3 (28-72)||(37058838-37058882)
chr3 (32-72)||(37223568-37223608)
chr3 (28-72)||(39078838-39078882)
chr3 (28-72)||(42258903-42258947)
chr3 (28-72)||(47702491-47702535)
chr3 (28-72)||(53640032-53640076)
chr3 (26-70)||(53761463-53761507)
chr3 (28-72)||(54591532-54591576)
chr3 (33-72)||(38421978-38422017)
chr3 (26-69)||(40927026-40927069)
chr3 (26-72)||(32034084-32034130)
chr3 (28-66)||(34992576-34992614)
chr3 (28-66)||(34992868-34992906)
chr3 (26-72)||(35011857-35011903)
chr3 (31-72)||(22407718-22407759)
chr3 (28-65)||(26366731-26366768)
chr3 (28-77)||(35358520-35358569)
chr3 (26-67)||(39269498-39269539)
chr3 (27-72)||(40230705-40230750)
chr3 (38-71)||(42311207-42311240)
chr3 (28-72)||(4029711-4029755)
chr3 (28-72)||(48308524-48308568)
chr3 (28-72)||(51642495-51642539)
chr3 (1-72)||(12799873-12799944)
chr3 (26-65)||(29763761-29763799)
chr3 (26-65)||(32515972-32516011)
chr3 (26-72)||(26915109-26915155)
chr3 (26-68)||(26926904-26926946)
chr3 (30-68)||(32034293-32034331)
chr3 (30-72)||(33798868-33798910)
chr3 (26-72)||(35011650-35011696)
chr3 (26-68)||(37541924-37541966)
chr3 (26-56)||(39018855-39018885)
chr3 (26-56)||(40926712-40926742)
chr3 (26-72)||(42637812-42637858)
chr3 (26-71)||(1715149-1715194)
chr3 (27-68)||(42604905-42604946)
chr3 (28-68)||(1353404-1353444)
chr3 (26-66)||(12800089-12800129)
chr3 (28-72)||(21832758-21832802)
[»] chr8 (34 HSPs)
chr8 (26-72)||(33435876-33435922)
chr8 (28-72)||(8559574-8559618)
chr8 (28-72)||(8559745-8559789)
chr8 (5-75)||(15967862-15967930)
chr8 (26-72)||(43901082-43901128)
chr8 (28-72)||(5720934-5720978)
chr8 (28-72)||(15857172-15857216)
chr8 (28-72)||(20760727-20760771)
chr8 (28-72)||(43599304-43599348)
chr8 (28-72)||(45122304-45122348)
chr8 (29-72)||(18313777-18313820)
chr8 (28-71)||(35561660-35561703)
chr8 (33-72)||(43599511-43599550)
chr8 (26-72)||(25186765-25186811)
chr8 (26-72)||(30065984-30066030)
chr8 (27-68)||(30117502-30117543)
chr8 (28-72)||(8559866-8559909)
chr8 (28-72)||(10989308-10989352)
chr8 (28-72)||(15011096-15011140)
chr8 (28-72)||(40902460-40902504)
chr8 (26-72)||(33435672-33435718)
chr8 (26-67)||(8056302-8056343)
chr8 (28-72)||(15010888-15010933)
chr8 (27-72)||(30176530-30176575)
chr8 (5-72)||(22188928-22188993)
chr8 (28-72)||(37537162-37537206)
chr8 (28-72)||(42228764-42228808)
chr8 (26-73)||(8056552-8056599)
chr8 (26-72)||(15968493-15968539)
chr8 (30-72)||(16454704-16454746)
chr8 (28-72)||(4196017-4196062)
chr8 (27-72)||(12941563-12941608)
chr8 (28-72)||(10989101-10989145)
chr8 (27-67)||(36039860-36039900)
[»] chr7 (44 HSPs)
chr7 (26-72)||(16565091-16565137)
chr7 (26-72)||(16600525-16600571)
chr7 (26-72)||(35866704-35866750)
chr7 (26-72)||(4258065-4258111)
chr7 (26-72)||(4258269-4258315)
chr7 (30-72)||(16564887-16564929)
chr7 (30-72)||(16600733-16600775)
chr7 (26-72)||(23390583-23390629)
chr7 (26-72)||(31357740-31357786)
chr7 (26-72)||(33855684-33855730)
chr7 (26-72)||(48113990-48114036)
chr7 (28-72)||(6214302-6214346)
chr7 (28-72)||(6782819-6782863)
chr7 (28-72)||(6783031-6783075)
chr7 (28-72)||(9378786-9378830)
chr7 (28-72)||(9378993-9379037)
chr7 (28-72)||(29252569-29252613)
chr7 (28-72)||(39808664-39808708)
chr7 (26-72)||(5266352-5266398)
chr7 (26-72)||(10903342-10903388)
chr7 (26-72)||(10903549-10903595)
chr7 (26-72)||(33833943-33833989)
chr7 (26-72)||(33855474-33855520)
chr7 (27-72)||(6751571-6751616)
chr7 (27-72)||(6751775-6751820)
chr7 (28-72)||(2179647-2179691)
chr7 (28-72)||(23396602-23396646)
chr7 (26-65)||(47856056-47856095)
chr7 (30-72)||(23821540-23821582)
chr7 (26-68)||(30768415-30768457)
chr7 (26-72)||(33834148-33834194)
chr7 (27-71)||(6813144-6813188)
chr7 (26-66)||(8681883-8681923)
chr7 (29-72)||(22841045-22841088)
chr7 (27-72)||(258424-258467)
chr7 (30-72)||(5775875-5775917)
chr7 (26-72)||(21557009-21557055)
chr7 (26-72)||(29646057-29646103)
chr7 (29-67)||(36238206-36238244)
chr7 (27-72)||(23821742-23821787)
chr7 (26-71)||(31374964-31375009)
chr7 (27-68)||(40703925-40703966)
chr7 (28-72)||(13310492-13310536)
chr7 (26-66)||(49040565-49040605)
[»] chr5 (52 HSPs)
chr5 (1-72)||(28156029-28156104)
chr5 (26-72)||(39268011-39268057)
chr5 (27-72)||(18107544-18107589)
chr5 (28-72)||(38376724-38376768)
chr5 (28-72)||(43490323-43490367)
chr5 (32-78)||(13413777-13413823)
chr5 (26-72)||(39268219-39268265)
chr5 (26-71)||(32501205-32501250)
chr5 (28-72)||(48171-48215)
chr5 (28-72)||(2908629-2908673)
chr5 (27-71)||(3015687-3015731)
chr5 (28-72)||(3762899-3762943)
chr5 (28-72)||(28358102-28358146)
chr5 (28-72)||(34457296-34457340)
chr5 (28-72)||(43490530-43490574)
chr5 (28-67)||(35527208-35527247)
chr5 (26-72)||(29008065-29008111)
chr5 (30-72)||(35527344-35527386)
chr5 (27-72)||(3015483-3015528)
chr5 (1-71)||(30330643-30330723)
chr5 (28-65)||(35527055-35527092)
chr5 (28-72)||(13413577-13413621)
chr5 (28-72)||(15286846-15286890)
chr5 (28-72)||(15287046-15287090)
chr5 (26-74)||(18873259-18873307)
chr5 (28-72)||(18914228-18914272)
chr5 (28-72)||(18914435-18914479)
chr5 (28-72)||(37781911-37781955)
chr5 (28-67)||(40169108-40169147)
chr5 (26-72)||(10668353-10668399)
chr5 (26-72)||(18107826-18107872)
chr5 (26-72)||(20720615-20720661)
chr5 (26-72)||(36878319-36878365)
chr5 (28-72)||(10516334-10516379)
chr5 (36-72)||(3763093-3763129)
chr5 (28-72)||(11632424-11632468)
chr5 (40-72)||(17130063-17130095)
chr5 (28-72)||(24125055-24125099)
chr5 (28-72)||(37656799-37656843)
chr5 (26-65)||(17135519-17135558)
chr5 (26-72)||(395098-395144)
chr5 (26-72)||(395225-395271)
chr5 (26-72)||(395360-395406)
chr5 (26-72)||(4563756-4563802)
chr5 (26-72)||(21019935-21019981)
chr5 (28-66)||(34457095-34457133)
chr5 (43-72)||(28156232-28156261)
chr5 (28-65)||(30592428-30592465)
chr5 (28-72)||(2908836-2908880)
chr5 (28-68)||(30870952-30870992)
chr5 (32-72)||(35656915-35656955)
chr5 (28-72)||(36307989-36308033)
[»] chr4 (51 HSPs)
chr4 (26-72)||(28497279-28497325)
chr4 (28-72)||(43943666-43943710)
chr4 (26-72)||(25753670-25753716)
chr4 (26-72)||(47491911-47491957)
chr4 (27-72)||(17077006-17077051)
chr4 (27-72)||(17077210-17077255)
chr4 (27-72)||(28245986-28246031)
chr4 (28-72)||(5488360-5488404)
chr4 (28-72)||(12016750-12016794)
chr4 (28-72)||(12016958-12017002)
chr4 (28-72)||(21498524-21498568)
chr4 (28-72)||(27634393-27634437)
chr4 (28-72)||(28395171-28395215)
chr4 (28-72)||(39110900-39110944)
chr4 (28-68)||(50307273-50307313)
chr4 (28-72)||(54210370-54210414)
chr4 (26-72)||(8560036-8560082)
chr4 (26-72)||(23350792-23350838)
chr4 (26-72)||(26806504-26806550)
chr4 (26-72)||(45684239-45684285)
chr4 (27-72)||(3055776-3055821)
chr4 (4-72)||(28245784-28245859)
chr4 (28-72)||(1923058-1923102)
chr4 (28-72)||(29113442-29113486)
chr4 (32-72)||(33629597-33629637)
chr4 (32-72)||(33629856-33629896)
chr4 (28-72)||(49380947-49380991)
chr4 (28-72)||(53559372-53559416)
chr4 (25-72)||(35565072-35565119)
chr4 (26-72)||(3640199-3640245)
chr4 (26-72)||(3640449-3640495)
chr4 (25-59)||(7892716-7892750)
chr4 (30-72)||(14945136-14945178)
chr4 (26-72)||(53720735-53720781)
chr4 (26-72)||(53863898-53863944)
chr4 (26-72)||(56511290-56511336)
chr4 (26-72)||(56511497-56511543)
chr4 (27-72)||(33629652-33629697)
chr4 (28-72)||(5065846-5065890)
chr4 (28-72)||(40716703-40716747)
chr4 (26-72)||(8305020-8305066)
chr4 (26-72)||(21647646-21647692)
chr4 (26-72)||(22865763-22865808)
chr4 (27-69)||(33629917-33629959)
chr4 (26-72)||(33797174-33797220)
chr4 (26-72)||(55100091-55100137)
chr4 (26-55)||(9758314-9758343)
chr4 (28-72)||(5066052-5066096)
chr4 (26-58)||(7198051-7198083)
chr4 (28-72)||(39110710-39110754)
chr4 (26-66)||(52827297-52827337)
[»] chr6 (27 HSPs)
chr6 (28-72)||(6623492-6623536)
chr6 (26-72)||(25998810-25998856)
chr6 (26-72)||(26098335-26098381)
chr6 (28-72)||(11313449-11313493)
chr6 (28-72)||(16877077-16877121)
chr6 (26-70)||(30539415-30539459)
chr6 (29-72)||(16590177-16590220)
chr6 (29-72)||(16605160-16605203)
chr6 (26-72)||(25999016-25999062)
chr6 (26-72)||(28149786-28149832)
chr6 (27-72)||(11317041-11317086)
chr6 (28-72)||(15101178-15101222)
chr6 (26-66)||(19291983-19292023)
chr6 (28-72)||(24558576-24558620)
chr6 (26-72)||(26098747-26098793)
chr6 (26-72)||(26394544-26394590)
chr6 (27-72)||(11316836-11316881)
chr6 (27-72)||(15102691-15102736)
chr6 (26-78)||(12124759-12124811)
chr6 (28-72)||(18494341-18494385)
chr6 (28-72)||(19712471-19712515)
chr6 (26-57)||(30539243-30539274)
chr6 (26-72)||(2923021-2923067)
chr6 (26-72)||(26098541-26098587)
chr6 (27-72)||(15102818-15102862)
chr6 (30-66)||(2902819-2902855)
chr6 (27-70)||(30526832-30526876)
[»] chr2 (41 HSPs)
chr2 (28-72)||(883668-883712)
chr2 (28-72)||(12419831-12419875)
chr2 (28-72)||(12431891-12431935)
chr2 (28-72)||(17727397-17727441)
chr2 (1-72)||(33985801-33985880)
chr2 (26-72)||(39386663-39386709)
chr2 (28-77)||(34775345-34775394)
chr2 (28-72)||(884050-884094)
chr2 (28-72)||(6986483-6986527)
chr2 (28-72)||(10570928-10570972)
chr2 (28-72)||(16006970-16007014)
chr2 (28-72)||(19859918-19859962)
chr2 (28-72)||(19860030-19860074)
chr2 (28-72)||(20999056-20999100)
chr2 (28-72)||(25621352-25621396)
chr2 (28-72)||(29695406-29695450)
chr2 (28-72)||(33986042-33986086)
chr2 (28-72)||(40009967-40010011)
chr2 (1-72)||(26847084-26847154)
chr2 (26-72)||(8044611-8044657)
chr2 (26-72)||(10485171-10485217)
chr2 (26-72)||(32667176-32667222)
chr2 (28-72)||(21734409-21734453)
chr2 (28-72)||(31761125-31761169)
chr2 (26-68)||(4721869-4721911)
chr2 (26-72)||(14127252-14127298)
chr2 (26-68)||(26847307-26847349)
chr2 (26-72)||(29676287-29676333)
chr2 (26-72)||(32666970-32667016)
chr2 (28-68)||(883847-883887)
chr2 (28-72)||(3435553-3435597)
chr2 (28-72)||(7257675-7257719)
chr2 (28-72)||(12432098-12432142)
chr2 (29-65)||(17265043-17265079)
chr2 (28-72)||(27545183-27545227)
chr2 (28-72)||(29684004-29684048)
chr2 (30-72)||(18607322-18607364)
chr2 (26-72)||(22447298-22447344)
chr2 (28-57)||(18901931-18901960)
chr2 (28-72)||(15518660-15518704)
chr2 (30-66)||(31761330-31761366)
[»] chr1 (51 HSPs)
chr1 (28-72)||(15392018-15392062)
chr1 (28-72)||(39649151-39649195)
chr1 (28-72)||(52846916-52846960)
chr1 (26-72)||(38871220-38871266)
chr1 (28-72)||(9380893-9380937)
chr1 (28-72)||(24382218-24382262)
chr1 (28-72)||(29265911-29265955)
chr1 (28-72)||(29273292-29273336)
chr1 (28-72)||(39648828-39648872)
chr1 (28-72)||(48558388-48558432)
chr1 (26-72)||(5222687-5222733)
chr1 (26-72)||(45395545-45395591)
chr1 (26-72)||(47377828-47377874)
chr1 (27-72)||(1233919-1233964)
chr1 (26-71)||(49828665-49828710)
chr1 (28-72)||(2997123-2997167)
chr1 (28-72)||(12314571-12314615)
chr1 (26-66)||(22826810-22826850)
chr1 (30-78)||(24382637-24382685)
chr1 (28-72)||(39648945-39648988)
chr1 (33-72)||(49142675-49142714)
chr1 (29-72)||(52921535-52921578)
chr1 (28-66)||(15391747-15391785)
chr1 (26-72)||(29413341-29413387)
chr1 (27-72)||(11581748-11581793)
chr1 (26-71)||(29413136-29413181)
chr1 (28-65)||(43361619-43361656)
chr1 (28-65)||(43361824-43361861)
chr1 (28-68)||(2997328-2997368)
chr1 (28-72)||(13959395-13959439)
chr1 (5-72)||(22892467-22892532)
chr1 (28-72)||(25799113-25799157)
chr1 (26-72)||(38871014-38871061)
chr1 (26-60)||(20429039-20429073)
chr1 (26-72)||(21428123-21428169)
chr1 (26-72)||(30958655-30958701)
chr1 (26-68)||(42845086-42845128)
chr1 (26-72)||(45982175-45982221)
chr1 (26-72)||(47086342-47086388)
chr1 (38-71)||(331478-331511)
chr1 (31-72)||(18374518-18374559)
chr1 (27-72)||(22892754-22892799)
chr1 (27-72)||(24382426-24382471)
chr1 (28-65)||(33342345-33342382)
chr1 (27-72)||(36332304-36332349)
chr1 (28-72)||(5324993-5325037)
chr1 (29-65)||(6238157-6238193)
chr1 (28-64)||(11590421-11590457)
chr1 (28-72)||(21539001-21539045)
chr1 (40-72)||(36331908-36331940)
chr1 (32-72)||(40073301-40073341)
[»] scaffold0989 (1 HSPs)
scaffold0989 (28-72)||(3014-3058)
[»] scaffold0029 (1 HSPs)
scaffold0029 (28-66)||(76851-76889)
[»] scaffold1138 (1 HSPs)
scaffold1138 (26-66)||(1938-1978)
[»] scaffold0434 (2 HSPs)
scaffold0434 (28-72)||(13506-13550)
scaffold0434 (28-72)||(13299-13343)
[»] scaffold0060 (2 HSPs)
scaffold0060 (38-72)||(59518-59552)
scaffold0060 (28-72)||(13699-13743)
[»] scaffold0054 (1 HSPs)
scaffold0054 (28-72)||(21330-21375)


Alignment Details
Target: chr3 (Bit Score: 522; Significance: 0; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 522; E-Value: 0
Query Start/End: Original strand, 1 - 599
Target Start/End: Complemental strand, 29369865 - 29369268
Alignment:
Q  1 tgtaaggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaatccatccaagttccattttaacataagtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29369865 tgtaaggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaatacatccaagttccattttaacataagtt 29369766  T
Q  101 ggactcgggatcgggacatggaggagttttctgttccatacatggttcagttgtgttcccatnnnnnnnnntgcagtacttatccaattatgcacgttgt 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||    
T  29369765 ggactcgggatcgggacatggaggagttttccgttccatacatggttcagttgtgttcccataaaaaaaa-tgcagtacttatccaattatgcacgttgt 29369667  T
Q  201 aaacctcaattcaattataggggtagaatcacaacatcaaatgatagcaagcatgcctaatcctggaaaagaataccgataagaaactacagatatatcc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29369666 aaacctcaattcaattataggggtagaatcacaacatcaaatgatagcaagcatgcctaatcctggaaaagaataccgataagaaactacagatatatcc 29369567  T
Q  301 taaattcaggaccaagaaatgcatatccgtttacaaaatctatgaagtacatttagacnnnnnnntacctagttgtagagagaacacaaactccctttcc 400  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  29369566 taaattcaggaccaagaaatgcatatccgtttactaaatctataaagtacatttagacaaaaaaatacctagttgtagagagaacacaaactccctttcc 29369467  T
Q  401 atcagtctctgctttaatgcaaacttcatcgctaccactgcaaccctgttgacaacctgagctactattctcctttgggatagaagttatatcggctaga 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29369466 atcagtctctgctttaatgcaaacttcatcgctaccactgcaaccctgttgacaacctgagctactattctcctttgagatagaagttatatcggctaga 29369367  T
Q  501 aaattccagatgaacctaggaacgtcattaatgtatcctggattaggtgtggaagaaggttcatctaagataaaaccaacataattgctcgcacaggtt 599  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29369366 aaattccagatgaacctaggaacgtcattaatgtatcctggattaggtgtggaagaaggttcatctaagataacaccaacataattgctcgcacaggtt 29369268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 9264153 - 9264197
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9264153 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 9264197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 9264567 - 9264611
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9264567 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 9264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 49477571 - 49477528
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  49477571 tcaagagtcttatctatccgatgtgggacttgggtttttcccaa 49477528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 50692565 - 50692519
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  50692565 tatcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 50692519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 4191189 - 4191233
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  4191189 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 4191233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 50692360 - 50692316
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  50692360 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 50692316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 51338508 - 51338552
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  51338508 tcaagagtcttatctatctgatgtgggacttgggtttttcccaat 51338552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 53640239 - 53640283
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  53640239 tcaagagtcttatctatctgatgtgggacttgggtttttcccaat 53640283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 54495568 - 54495524
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  54495568 tcaagagtcttatctatccgatgtgggacttggatttttcccaat 54495524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 19984444 - 19984512
Alignment:
Q  2 gtaaggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| |||||||||||||||||| ||   |||||||||||||||||||||| || ||||||||||||    
T  19984444 gtaaggtgcggattgcctcctctatataaac--tcttatctatccgatgtgggacatgagtttttcccaat 19984512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 25627990 - 25628032
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  25627990 aagaatcttatctatccgatgtgggacttgggtttttcccaat 25628032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 35015524 - 35015478
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||    
T  35015524 tatcaagagttttatctatccgatgtgggacttggctttttcccaat 35015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 40926493 - 40926447
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  40926493 tatcaagagtcttatctatccgatgtgggacatgtgtttttcccaat 40926447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 44145459 - 44145505
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  44145459 tatcaagagtcatatctatccgatgtgggatttgggtttttcccaat 44145505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 25578752 - 25578797
Alignment:
Q  33 agtcttatctatccgatgtgggacttgggtttttcccaatccatcc 78  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||    
T  25578752 agtcttatctatccgatgtgggacatgggtttttcccaatacatcc 25578797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 40230500 - 40230545
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  40230500 atcaagagtctcatctatccgatgtggaacttgggtttttcccaat 40230545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 51642702 - 51642747
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggac-ttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  51642702 tcaagagtcttatctatccgatgtgggactttgggtttttcccaat 51642747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 5440614 - 5440570
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  5440614 tcaagagtcttgtctatccgatgtggaacttgggtttttcccaat 5440570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 9264360 - 9264404
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  9264360 tcaagagtcttgtctatccgatgtgggacttggatttttcccaat 9264404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 10758835 - 10758879
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  10758835 tcaagagtcttatctatccgatgtgggacttgagttttttccaat 10758879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 22339778 - 22339734
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  22339778 tcaagagtcttgtctatccgatgtgggacttggatttttcccaat 22339734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 37058838 - 37058882
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  37058838 tcaagagtcttgtctatctgatgtgggacttgggtttttcccaat 37058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 37223608 - 37223568
Alignment:
Q  32 gagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37223608 gagtcttatctatccgatgtgggacttaggtttttcccaat 37223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 39078838 - 39078882
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  39078838 tcaagagtcttgtctatccgatatgggacttgggtttttcccaat 39078882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 42258947 - 42258903
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  42258947 tcaagaatcttatctatccgatgtgggacttggatttttcccaat 42258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 47702491 - 47702535
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||    
T  47702491 tcaagagtctcatctatccgatgtgggacttgtgtttttcccaat 47702535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 53640032 - 53640076
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  53640032 tcaagagtcttatctatccgatatgggacttggatttttcccaat 53640076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 53761463 - 53761507
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttccca 70  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||    
T  53761463 tatcaagggtcttatctatccgaagtgggacttgggtttttccca 53761507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 54591532 - 54591576
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  54591532 tcaagagtcttgtctatccgatgtgggacttggatttttcccaat 54591576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 38422017 - 38421978
Alignment:
Q  33 agtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  38422017 agtcttatctatccgatgtgggacttaggtttttcccaat 38421978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 40927069 - 40927026
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttccc 69  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  40927069 tatcaagagtcttatctatccgatgtgggacatggatttttccc 40927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 32034130 - 32034084
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  32034130 tatcaagagtcttatctattcgatgtgggacatgagtttttcccaat 32034084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 34992614 - 34992576
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34992614 tcaagagtcttatctatctgatgtgggacttgggttttt 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 34992906 - 34992868
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34992906 tcaagagtcttatctatctgatgtgggacttgggttttt 34992868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 35011903 - 35011857
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||    
T  35011903 tatcaagagtcttatctactcaatgtgggacttgggtttttcccaat 35011857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 22407718 - 22407759
Alignment:
Q  31 agagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  22407718 agagtcttgtctatccgatgtgggacttggatttttcccaat 22407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 26366768 - 26366731
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26366768 tcaagagtcttgtctatccgatgtgggacttgggtttt 26366731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 35358520 - 35358569
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaatccatc 77  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||| ||||    
T  35358520 tcaagagtcttatctatctgatgtgagacttggatttttcccaatacatc 35358569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 39269539 - 39269498
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttc 67  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  39269539 tatcaagagtcttatctatccgatgtgggacatggatttttc 39269498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 40230705 - 40230750
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  40230705 atcaagagtctcatctatccgatgtggaacttgggtttttctcaat 40230750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 42311240 - 42311207
Alignment:
Q  38 tatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||||||||||||||||||||||||||    
T  42311240 tatctatccgatgtgggacttgggtttttcccaa 42311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 4029711 - 4029755
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||  || ||||||||    
T  4029711 tcaagagtcttatctatccgatgtgggacttgcattattcccaat 4029755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 48308524 - 48308568
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||    
T  48308524 tcaagagtcttgtctattcgatgtgggacttggatttttcccaat 48308568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 51642495 - 51642539
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||    
T  51642495 tcaagagtcttatctatccaacgtgggacttgggtttttcgcaat 51642539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12799944 - 12799873
Alignment:
Q  1 tgtaaggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||| |||| ||| ||   |  |||||||||||||||||||||| |||||| |||||    
T  12799944 tgtaaggtgaggattgccttctctttataaactcttatatctatccgatgtgggacttgagttttttccaat 12799873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 29763761 - 29763799
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  29763761 tatcaagagtcttatctatccgatgtggga-ttgggtttt 29763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 32515972 - 32516011
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  32515972 tatcaagagtcttatctatccgatgtgggacatgagtttt 32516011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26915155 - 26915109
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| ||| ||||||||| |||||| |||||    
T  26915155 tatcaagagtcttatctatctgatctgggacttgagttttttccaat 26915109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 26926946 - 26926904
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||||||||||||||||| |||||||||| ||| |||||||    
T  26926946 tatcaagagtcttatctatctgatgtgggacatggttttttcc 26926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 32034331 - 32034293
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  32034331 aagagtcttatctatccgatgtgggacataggtttttcc 32034293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 33798868 - 33798910
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||| |||||||||||||||| |||||||||| |||||    
T  33798868 aagagtcttgtctatccgatgtgggatttgggttttttccaat 33798910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 35011696 - 35011650
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||  | ||||||||||||||||||| |||||    
T  35011696 tatcaagagtcttatctactcaatgtgggacttgggttttttccaat 35011650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 37541924 - 37541966
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  37541924 tatcaagagttttatctatccgatgtgggacttgaatttttcc 37541966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 56
Target Start/End: Original strand, 39018855 - 39018885
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggac 56  Q
    |||||||||||||||||||||||||||||||    
T  39018855 tatcaagagtcttatctatccgatgtgggac 39018885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 56
Target Start/End: Complemental strand, 40926742 - 40926712
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggac 56  Q
    |||||||||||||||||||||||||||||||    
T  40926742 tatcaagagtcttatctatccgatgtgggac 40926712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 42637812 - 42637858
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||| ||||||||  || ||||||||||||    
T  42637812 tatcaagagtcttatctatccaatgtgggatatgagtttttcccaat 42637858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 1715149 - 1715194
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||||||||| || |||||| ||||| ||||||||||||    
T  1715149 tatcaagagtcttatctgtctgatgtgagacttcggtttttcccaa 1715194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 42604946 - 42604905
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    ||||||||||| |||||||||||||| ||||||| |||||||    
T  42604946 atcaagagtctcatctatccgatgtgagacttggatttttcc 42604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 1353444 - 1353404
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||| |||| ||||| |||||||||||||||||||||||    
T  1353444 tcaagaatcttgtctatgcgatgtgggacttgggtttttcc 1353404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 12800129 - 12800089
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    |||||||||||||||||||| || |||||||||| ||||||    
T  12800129 tatcaagagtcttatctatctgacgtgggacttgagttttt 12800089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21832758 - 21832802
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||| | |||| |||||    
T  21832758 tcaagagtcttgtctatccgatgtgggacttgagatttttccaat 21832802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 33435922 - 33435876
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33435922 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 33435876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 8559618 - 8559574
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8559618 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 8559574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 8559745 - 8559789
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8559745 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 8559789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15967862 - 15967930
Alignment:
Q  5 aggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaatcca 75  Q
    |||||||||||| ||||||||||| ||   |||||||||||||||||||||| ||||||||||||||||||    
T  15967862 aggtgaggattgtctcctctatataaat--tcttatctatccgatgtgggacatgggtttttcccaatcca 15967930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 43901082 - 43901128
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  43901082 tatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 43901128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 5720934 - 5720978
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  5720934 tcaagagtcttatctatccgatgtgggacttggatttttcccaat 5720978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 15857216 - 15857172
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  15857216 tcaagagtcttatctatccgatgtgggacttgagtttttcccaat 15857172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 20760727 - 20760771
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  20760727 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 20760771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 43599348 - 43599304
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  43599348 tcaagagtcttatctatccgatgtgggacttgagtttttcccaat 43599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 45122348 - 45122304
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  45122348 tcaagagtcttatctatcagatgtgggacttgggtttttcccaat 45122304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 18313820 - 18313777
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  18313820 caagagtcttatctatccgatgtgggacttggatttttcccaat 18313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 35561703 - 35561660
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  35561703 tcaagaatcttatctatccgatgtgggacttgggtttttcccaa 35561660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 43599550 - 43599511
Alignment:
Q  33 agtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43599550 agtcttatctatccgatgtgggacttgggtttttcccaat 43599511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 25186811 - 25186765
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  25186811 tatcaagagtcttatctatccgatgtgggacttaggttttttccaat 25186765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 30066030 - 30065984
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  30066030 tatcaagagtcttatctatctgatgtgggacttgagtttttcccaat 30065984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 30117502 - 30117543
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  30117502 atcaagagtctcatctatccgatgtgggacttgggtttttcc 30117543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 8559866 - 8559909
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  8559866 tcaagagtct-atctatccgatgtgggacttgggtttttcccaat 8559909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 10989308 - 10989352
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  10989308 tcaagagtcttgtctatccgatgtgggacttgggttttttccaat 10989352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 15011096 - 15011140
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  15011096 tcaagagtcttgtctatccgatgtgggacttgggttttttccaat 15011140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 40902460 - 40902504
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  40902460 tcaagagtcttgtctatccgatgtggaacttgggtttttcccaat 40902504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 33435718 - 33435672
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||    
T  33435718 tatcaagagttttatctatccgatgtgagacttgagtttttcccaat 33435672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 8056302 - 8056343
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttc 67  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  8056302 tatcaagagtcttatctttccgatgtgggacatgggtttttc 8056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 15010888 - 15010933
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggactt-gggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  15010888 tcaagagtcttgtctatccgatgtgggacttggggtttttcccaat 15010933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 30176530 - 30176575
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||    
T  30176530 atcaagagtctcgtctatccgatgtgggacttgagtttttcccaat 30176575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 22188993 - 22188928
Alignment:
Q  5 aggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||| |||| ||   | |||||||||||||||||||| || ||||||||||||    
T  22188993 aggtgaggattgcctcctcaatataaac--ttttatctatccgatgtgggacatgagtttttcccaat 22188928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 37537162 - 37537206
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||    
T  37537162 tcaaaagtcttatctattcgatgtgggacttgagtttttcccaat 37537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 42228808 - 42228764
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||    
T  42228808 tcaagagtcttgtctatccgatgtgggacttagatttttcccaat 42228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 8056552 - 8056599
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaatc 73  Q
    |||||||||||||||||||| |||||||||| || |||||| ||||||    
T  8056552 tatcaagagtcttatctatctgatgtgggacatgtgttttttccaatc 8056599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 15968493 - 15968539
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||| |||||| ||||||||||| ||| |||||||||||    
T  15968493 tatcaagagtctaatctatacgatgtgggacatggatttttcccaat 15968539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 16454704 - 16454746
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||    
T  16454704 aagagtcttatctatccgatgtgagacttggtttttttccaat 16454746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 4196017 - 4196062
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggactt-gggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||    
T  4196017 tcaagagtcttgtctatccgatgtgggccttggggtttttcccaat 4196062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 12941608 - 12941563
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||| |||||| ||||||| ||||||| ||||||||||||||||||    
T  12941608 atcatgagtctcatctatctgatgtggtacttgggtttttcccaat 12941563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 10989101 - 10989145
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||    
T  10989101 tcaagagtcttgtctacctgatgtgggacttgggttttttccaat 10989145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 36039860 - 36039900
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttc 67  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  36039860 atcaagagtctcatctatccgatgtgagatttgggtttttc 36039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 16565137 - 16565091
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16565137 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 16565091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 16600525 - 16600571
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16600525 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 16600571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 35866704 - 35866750
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35866704 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 35866750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 4258065 - 4258111
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4258065 tatcaagagtcttatctatccgatgtgagacttgggtttttcccaat 4258111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 4258269 - 4258315
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  4258269 tatcaagagtcttatctatccgatgtgggacttgagtttttcccaat 4258315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 16564929 - 16564887
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16564929 aagagtcttatctatccgatgtgggacttgggtttttcccaat 16564887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 16600733 - 16600775
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16600733 aagagtcttatctatccgatgtgggacttgggtttttcccaat 16600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 23390629 - 23390583
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  23390629 tatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 23390583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 31357740 - 31357786
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  31357740 tatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 31357786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 33855730 - 33855684
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  33855730 tatcatgagtcttatctatccgatgtgggacttgggtttttcccaat 33855684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 48114036 - 48113990
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  48114036 tatcaagagtcttatctatccgatgtgggacttgggttattcccaat 48113990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 6214302 - 6214346
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  6214302 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 6214346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 6782863 - 6782819
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  6782863 tcaagagtcttatctatccgatgtgagacttgggtttttcccaat 6782819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 6783075 - 6783031
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  6783075 tcaagagtcttatctatccgatgtgagacttgggtttttcccaat 6783031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 9378830 - 9378786
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  9378830 tcaagagtcttatctattcgatgtgggacttgggtttttcccaat 9378786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 9379037 - 9378993
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  9379037 tcaagagtcttatctatccgatgtggaacttgggtttttcccaat 9378993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 29252613 - 29252569
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  29252613 tcaagagtcttatctatccgacgtgggacttgggtttttcccaat 29252569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 39808664 - 39808708
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  39808664 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 39808708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 5266398 - 5266352
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  5266398 tatcaagagtcttatctatctgatgtgggacatgggtttttcccaat 5266352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 10903342 - 10903388
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  10903342 tatcaagagtcttatctatccgatgtgggacatgtgtttttcccaat 10903388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 10903549 - 10903595
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  10903549 tatcaagagtcttatctatccgatgtgggacatgagtttttcccaat 10903595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 33833989 - 33833943
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33833989 tatcaagagtcttatctatccgatgtgggacatgggttttttccaat 33833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 33855520 - 33855474
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  33855520 tatcacgagtcttatctatccgatatgggacttgggtttttcccaat 33855474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 6751571 - 6751616
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  6751571 atcaagagtctcatctatccgatttgggacttgggtttttcccaat 6751616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 6751775 - 6751820
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  6751775 atcaagaatctcatctatccgatgtgggacttgggtttttcccaat 6751820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 2179691 - 2179647
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  2179691 tcaagagtcttatctatccgatgtgggacttgaatttttcccaat 2179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 23396646 - 23396602
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  23396646 tcaagagtcttatctatccgttgtgggacttggatttttcccaat 23396602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 47856056 - 47856095
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  47856056 tatcaagagtcttatctatccgatgtgggatttgggtttt 47856095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 23821540 - 23821582
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  23821540 aagagtctcatctatcctatgtgggacttgggtttttcccaat 23821582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 30768457 - 30768415
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  30768457 tatcaagagtcttatctatccgatgtgggacatgagtttttcc 30768415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 33834194 - 33834148
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||    
T  33834194 tatcaagagtcttatctatctgatgtgggacatggatttttcccaat 33834148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 6813144 - 6813188
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  6813144 atcaagagtcccatctatccgatgtgggacttgtgtttttcccaa 6813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 8681923 - 8681883
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  8681923 tatcaagagtcttatctatctgatgtgggacttggattttt 8681883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 22841088 - 22841045
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||| || | |||||||||||||||    
T  22841088 caagagtcttatctatccgatgtagggcatgggtttttcccaat 22841045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 258467 - 258424
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||    
T  258467 atcaagagtctcatctatccgatg--ggacttgggtttttcccaat 258424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 5775917 - 5775875
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| |||||| |||||||||||||| ||||||||||||    
T  5775917 aagagtctcatctatgcgatgtgggacttgagtttttcccaat 5775875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 21557055 - 21557009
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||  |||||||||||||||||||||| |||||| |||||    
T  21557055 tatcaagagttctatctatccgatgtgggacttgagttttttccaat 21557009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 29646103 - 29646057
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||| ||||||||| ||  |||||||||||    
T  29646103 tatcaagagtcttatctatccaatgtgggacatgaatttttcccaat 29646057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 36238244 - 36238206
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttttc 67  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  36238244 caagagtcttatgtatccaatgtgggacttgggtttttc 36238206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 23821742 - 23821787
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||| |||||||||||  ||||||||||||||||||    
T  23821742 atcaaaagtcttatttatccgatgtgaaacttgggtttttcccaat 23821787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 31375009 - 31374964
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||||||||||||  ||| |||||||| |||||||||||    
T  31375009 tatcaagagtcttatctatcttatgcgggacttgtgtttttcccaa 31374964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 40703925 - 40703966
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    ||||||||||| ||||||||||||||||||||| | ||||||    
T  40703925 atcaagagtctcatctatccgatgtgggacttgagcttttcc 40703966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 13310492 - 13310536
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||| || |||||||||||||||||| ||||    
T  13310492 tcaagagtctcatctatctgacgtgggacttgggtttttctcaat 13310536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 49040605 - 49040565
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    ||||||||||||||||||||||||||| ||| || ||||||    
T  49040605 tatcaagagtcttatctatccgatgtgagacatgagttttt 49040565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28156104 - 28156029
Alignment:
Q  1 tgtaaggtgaggattgcctcctctatatcaa----gagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||| ||| ||    ||||||| |||||||||||||||||||||||||||||||||    
T  28156104 tgtaaggtgaggattgcctcctctttataaactctgagtcttgtctatccgatgtgggacttgggtttttcccaat 28156029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 39268057 - 39268011
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39268057 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 39268011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 18107544 - 18107589
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18107544 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 18107589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 38376768 - 38376724
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38376768 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 38376724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 43490323 - 43490367
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43490323 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 43490367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 13413823 - 13413777
Alignment:
Q  32 gagtcttatctatccgatgtgggacttgggtttttcccaatccatcc 78  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13413823 gagtcttatctatccgatgtgggacttgggtttttcccaatacatcc 13413777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 39268265 - 39268219
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  39268265 tatcaagagttttatctatccgatgtgggacttgggtttttcccaat 39268219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 32501250 - 32501205
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32501250 tatcaagagtcttatctatccgatgtgggacttggatttttcccaa 32501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 48171 - 48215
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  48171 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 48215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 2908629 - 2908673
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  2908629 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 2908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 3015687 - 3015731
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  3015687 atcaagagtctcatctatccgatgtgggacttgggtttttcccaa 3015731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 3762943 - 3762899
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  3762943 tcaagagtcttatctatccgatgtgggacatgggtttttcccaat 3762899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 28358102 - 28358146
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  28358102 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 28358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 34457340 - 34457296
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  34457340 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 34457296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 43490530 - 43490574
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  43490530 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 43490574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 35527208 - 35527247
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttc 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35527208 tcaagagtcttatctatccgatgtgggacttgggtttttc 35527247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 29008111 - 29008065
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  29008111 tatcaagagtcttatctatccgatgtggaacatgggtttttcccaat 29008065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 35527344 - 35527386
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  35527344 aagagtcttagctatccgatgtgggacttgggtttttcccaat 35527386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 3015483 - 3015528
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  3015483 atcaagagtctcatctatccgatgtggggcttgggtttttcccaat 3015528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30330723 - 30330643
Alignment:
Q  1 tgtaaggtgaggattgcctcctctatatcaa----------gagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    |||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||| ||||||||||    
T  30330723 tgtaaggtgaggattgcctcctctatataaactctaattcagagtcttatctatccgatgtgggacttggatttttcccaa 30330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 35527055 - 35527092
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35527055 tcaagagtcttatctatccgatgtgggacttgggtttt 35527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 13413621 - 13413577
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  13413621 tcaagagtcttatctatttgatgtgggacttgggtttttcccaat 13413577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 15286890 - 15286846
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  15286890 tcaagagtcttatctatccgatgtgagacttggatttttcccaat 15286846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 15287090 - 15287046
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  15287090 tcaagagtcttatctatccgatataggacttgggtttttcccaat 15287046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 18873259 - 18873307
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaatcc 74  Q
    |||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  18873259 tatcaatagtcttatctatccgatgtgggacatgggcttttcccaatcc 18873307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 18914228 - 18914272
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  18914228 tcaagagtcttgactatccgatgtgggacttgggtttttcccaat 18914272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 18914435 - 18914479
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  18914435 tcaagagtcttgactatccgatgtgggacttgggtttttcccaat 18914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 37781911 - 37781955
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  37781911 tcaagagtcttatctatccgatgtgagacttgagtttttcccaat 37781955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 40169108 - 40169147
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttc 67  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40169108 tcaagagtcttatctatctgatgtgggacttgggtttttc 40169147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 10668399 - 10668353
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||    
T  10668399 tatcaagagttttatctatttgatgtgggacttgggtttttcccaat 10668353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 18107872 - 18107826
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||| || |||||||||| ||||||||||||||||    
T  18107872 tatcaagagtcttatcgattcgatgtgggaattgggtttttcccaat 18107826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 20720615 - 20720661
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  20720615 tatcaagaatcttatctatctgatgtgggacttgagtttttcccaat 20720661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 36878365 - 36878319
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||    
T  36878365 tatcaaaagtcttatctatctgatgtgggactttggtttttcccaat 36878319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 10516334 - 10516379
Alignment:
Q  28 tcaagagtctt-atctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  10516334 tcaagagtctttatctatccgatgtgggacttgagtttttcccaat 10516379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 3763129 - 3763093
Alignment:
Q  36 cttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3763129 cttatctatccgatgtgggacatgggtttttcccaat 3763093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 11632468 - 11632424
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||    
T  11632468 tcaagagtcttgtctatccgatgtgggacttggattttttccaat 11632424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 17130063 - 17130095
Alignment:
Q  40 tctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||    
T  17130063 tctatccgatgtgggacttgggtttttcccaat 17130095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 24125099 - 24125055
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  24125099 tcaagagtcttgtttatccgatgtaggacttgggtttttcccaat 24125055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 37656799 - 37656843
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||| |||||| |||||    
T  37656799 tcaagagtcttatctatccgatgtgagacttgagttttttccaat 37656843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 17135558 - 17135519
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  17135558 tatcaagagtcttatttatccgatgtgggacttgagtttt 17135519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 395098 - 395144
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||| ||| | |||||||||||||||||||||||    
T  395098 tatcaagagtcgtatctttccaacgtgggacttgggtttttcccaat 395144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 395271 - 395225
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||| ||| ||| |||||||||||||||||||||    
T  395271 tatcaagagtcatatctttccaatgcgggacttgggtttttcccaat 395225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 395406 - 395360
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| || ||||||||| ||||||||||||||| |||||||||    
T  395406 tatcaagaatcctatctatccaatgtgggacttgggtctttcccaat 395360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 4563756 - 4563802
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| |||||||||||||||||||| ||| || ||||||||||||    
T  4563756 tatcaaaagtcttatctatccgatgtgagacatgagtttttcccaat 4563802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 21019935 - 21019981
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||| |||||||||||| || || ||||||||||||    
T  21019935 tatcaagagtcttatatatccgatgtggaacatgagtttttcccaat 21019981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 34457133 - 34457095
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  34457133 tcaagagtcttgtctatccgatatgggacttgggttttt 34457095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 72
Target Start/End: Complemental strand, 28156261 - 28156232
Alignment:
Q  43 atccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||    
T  28156261 atccgatgtgggacttgggtttttcccaat 28156232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 30592465 - 30592428
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  30592465 tcaagagtcttatctatccgatgtgagacttggatttt 30592428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 2908836 - 2908880
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||| |||||| |||||| |||||||||||||| |||||||||||    
T  2908836 tcaaaagtcttgtctatctgatgtgggacttggatttttcccaat 2908880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 30870952 - 30870992
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||| ||||||||||||||||||| | ||||||||||||    
T  30870952 tcaagaatcttatctatccgatgtggaatttgggtttttcc 30870992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 35656955 - 35656915
Alignment:
Q  32 gagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| ||||||||| ||||| |||||||||||||||||||    
T  35656955 gagtcctatctatccaatgtgagacttgggtttttcccaat 35656915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 36307989 - 36308033
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||| |||||  ||||| |||||    
T  36307989 tcaagagtcttatctatccgatgtggaacttgaattttttccaat 36308033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 28497279 - 28497325
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28497279 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 28497325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 43943710 - 43943666
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43943710 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 43943666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 25753670 - 25753716
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  25753670 tatcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 25753716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 47491911 - 47491957
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  47491911 tatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 47491957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 17077006 - 17077051
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  17077006 atcaagagtctcatctatccgatgtgggacttgggtttttcccaat 17077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 17077210 - 17077255
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  17077210 atcaagagtctcatctatccgatgtgggacttgggtttttcccaat 17077255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 28246031 - 28245986
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  28246031 atcaagagtctcatctatccgatgtgggacttgggtttttcccaat 28245986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 5488404 - 5488360
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  5488404 tcaagagtcttatttatccgatgtgggacttgggtttttcccaat 5488360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 12016750 - 12016794
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  12016750 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 12016794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 12016958 - 12017002
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  12016958 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 12017002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 21498568 - 21498524
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  21498568 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 21498524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27634393 - 27634437
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  27634393 tcaagagtcttatctatccgatgtgggactttggtttttcccaat 27634437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 28395215 - 28395171
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  28395215 tcaagagtcttatctatccaatgtgggacttgggtttttcccaat 28395171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 39110944 - 39110900
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  39110944 tcaagagtcttatctatccgatgtgggacttgagtttttcccaat 39110900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 50307313 - 50307273
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  50307313 tcaagagtcttatctatccgatgtgggacttgggtttttcc 50307273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 54210414 - 54210370
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  54210414 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 54210370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8560036 - 8560082
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  8560036 tatcaagagtcttatctatccgatgtgggacttggacttttcccaat 8560082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 23350838 - 23350792
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  23350838 tatcaagagtcttatttatccgatgtgggatttgggtttttcccaat 23350792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26806550 - 26806504
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  26806550 tatcaagagtcctatctatccgatttgggacttgggtttttcccaat 26806504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 45684239 - 45684285
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  45684239 tatcaagagtcgtatctatccgatgtgggacatgggtttttcccaat 45684285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 3055821 - 3055776
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||    
T  3055821 atcaagagtcctatctatccaatgtgggacttgggtttttcccaat 3055776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 28245859 - 28245784
Alignment:
Q  4 aaggtgaggattgcctcctctatatcaa-------gagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||| ||| ||       |||||| ||||||||||||||||||||||||||||||||||    
T  28245859 aaggtgaggattgcctcctctttataaactctcatgagtctcatctatccgatgtgggacttgggtttttcccaat 28245784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 1923058 - 1923102
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  1923058 tcaagagtcttatctatctgatgtgggacatgggtttttcccaat 1923102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 29113486 - 29113442
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  29113486 tcaagagtcttatctatctgatgtgggacatgggtttttcccaat 29113442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 33629637 - 33629597
Alignment:
Q  32 gagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  33629637 gagtctcatctatccgatgtgggacttgggtttttcccaat 33629597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 33629896 - 33629856
Alignment:
Q  32 gagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  33629896 gagtctcatctatccgatgtgggacttgggtttttcccaat 33629856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 49380947 - 49380991
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  49380947 tcaagagtcttatctatccgatgtgagacttggatttttcccaat 49380991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 53559372 - 53559416
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  53559372 tcaagagttttatctatccgatgtgggacttggttttttcccaat 53559416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 35565119 - 35565072
Alignment:
Q  25 atatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||| ||||||||| | |||||||||||||||||||||||    
T  35565119 atatcaagagtcctatctatccaacgtgggacttgggtttttcccaat 35565072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 3640245 - 3640199
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||    
T  3640245 tatcaagagtcttatctatccgacgtgggacatgagtttttcccaat 3640199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 3640495 - 3640449
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||    
T  3640495 tatcaagagtcttatctatccgatgtgggagatgagtttttcccaat 3640449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 7892716 - 7892750
Alignment:
Q  25 atatcaagagtcttatctatccgatgtgggacttg 59  Q
    |||||||||||||||||||||||||||||||||||    
T  7892716 atatcaagagtcttatctatccgatgtgggacttg 7892750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 14945178 - 14945136
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  14945178 aagagtcttatctatccgatgtgggacatgtgtttttcccaat 14945136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 53720735 - 53720781
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||    
T  53720735 tatcaaaagtcttatctatccgatgtgggacttcagtttttcccaat 53720781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 53863944 - 53863898
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  53863944 tatcaaaagtcttatctatccgatgttggacttgggtttttctcaat 53863898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 56511336 - 56511290
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||    
T  56511336 tatcaagagtcttatctactcaatgtgggacttgggtttttcccaat 56511290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 56511543 - 56511497
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||    
T  56511543 tatcaagagtcttatctactcaatgtgggacttgggtttttcccaat 56511497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 33629697 - 33629652
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||    
T  33629697 atcaagagtctcatctatccaatgtggaacttgggtttttcccaat 33629652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 5065890 - 5065846
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||| |||||| |||||    
T  5065890 tcaagagtcttatctatccgatgtgagacttgagttttttccaat 5065846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 40716703 - 40716747
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||    
T  40716703 tcaagagtcttatctatacgatgtgggacttgagttttttccaat 40716747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8305020 - 8305066
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| ||||||||||||||||||| |||| || ||||||||||||    
T  8305020 tatcaaaagtcttatctatccgatgtaggacatgagtttttcccaat 8305066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 21647646 - 21647692
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||||  |||||| ||||    
T  21647646 tatcaagagtcatatctatccgatgtgggacttgaatttttctcaat 21647692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 22865808 - 22865763
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  22865808 tatcaagggtcttatctatccgatgt-ggacttgagtttttcccaat 22865763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 33629959 - 33629917
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttccc 69  Q
    ||||||||||| |||||||| |||||||||||| |||||||||    
T  33629959 atcaagagtctcatctatccaatgtgggacttgagtttttccc 33629917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 33797174 - 33797220
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||| |||||||| | ||||||||||||||    
T  33797174 tatcaagagtcctatctatccaatgtgggattcgggtttttcccaat 33797220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 55100137 - 55100091
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||    
T  55100137 tatcaagagtcatatctatctaatgtgggacttggatttttcccaat 55100091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 9758343 - 9758314
Alignment:
Q  26 tatcaagagtcttatctatccgatgtggga 55  Q
    ||||||||||||||||||||||||||||||    
T  9758343 tatcaagagtcttatctatccgatgtggga 9758314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 5066096 - 5066052
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||| |||| |||||||||||||  |||||||||||    
T  5066096 tcaagagtcttatttatctgatgtgggacttgaatttttcccaat 5066052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 7198051 - 7198083
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggactt 58  Q
    ||||||||||||||||||||| |||||||||||    
T  7198051 tatcaagagtcttatctatccaatgtgggactt 7198083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 39110754 - 39110710
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| |||||||||||||||||| |||||| |||||| |||||    
T  39110754 tcaagattcttatctatccgatgtgagacttgagttttttccaat 39110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 52827297 - 52827337
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    ||||||||||| ||||||||| ||||| |||||||||||||    
T  52827297 tatcaagagtcctatctatccaatgtgagacttgggttttt 52827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 6623492 - 6623536
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6623492 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 6623536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 25998856 - 25998810
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  25998856 tatcatgagtcttatctatccgatgtgggacttgggtttttcccaat 25998810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26098381 - 26098335
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  26098381 tatcatgagtcttatctatccgatgtgggacttgggtttttcccaat 26098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 11313449 - 11313493
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  11313449 tcaagagtcttatctatccgatgtgggatttgggtttttcccaat 11313493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 16877077 - 16877121
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  16877077 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 16877121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 30539459 - 30539415
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttccca 70  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  30539459 tatcaaaagtcttatctatccgatgtgggacttgggtttttccca 30539415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 16590220 - 16590177
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  16590220 caagagtcttgtctatccgatgtgggacttgggtttttcccaat 16590177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 16605160 - 16605203
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  16605160 caagagtcttgtctatccgatgtgggacttgggtttttcccaat 16605203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 25999062 - 25999016
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  25999062 tatcatgagtcttatcaatccgatgtgggacttgggtttttcccaat 25999016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 28149832 - 28149786
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||    
T  28149832 tatcaagagttttatctatccgatgtgggacatgggtttttcccaat 28149786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 11317086 - 11317041
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||    
T  11317086 atcaagagtttcatctatccgatgtgggacttgggtttttcccaat 11317041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 15101178 - 15101222
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  15101178 tcaagagtcttgtctatccgatgtgggacttggatttttcccaat 15101222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 19291983 - 19292023
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  19291983 tatcaagagtcttatctatccgatgtgggactttggttttt 19292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 24558620 - 24558576
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    
T  24558620 tcaagagtcttatctatctgatgtgggacttggatttttcccaat 24558576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26098793 - 26098747
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  26098793 tatcatgagtcttatcaatccgatgtaggacttgggtttttcccaat 26098747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26394590 - 26394544
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||| || || ||||||||||||    
T  26394590 tatcaagagtcttatctatccgatgtggaacatgagtttttcccaat 26394544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 11316881 - 11316836
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  11316881 atcaagagtctcatctatccgatgtggaacttgagtttttcccaat 11316836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 15102691 - 15102736
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  15102691 atcaagagtctcatctatttgatgtgggacttgggtttttcccaat 15102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 12124759 - 12124811
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaatccatcc 78  Q
    |||||| ||||| ||||||| |||||||||||| ||||||||||||| |||||    
T  12124759 tatcaatagtctcatctatctgatgtgggacttaggtttttcccaatacatcc 12124811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 18494341 - 18494385
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||    
T  18494341 tcaagagtcttgtctatctgatgtgggatttgggtttttcccaat 18494385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 19712471 - 19712515
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||| || ||| |||||||||||    
T  19712471 tcaagagtcttatctatccgatgtggaacatggatttttcccaat 19712515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 30539274 - 30539243
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggact 57  Q
    ||||||||||||||||||||||||||||||||    
T  30539274 tatcaagagtcttatctatccgatgtgggact 30539243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 2923021 - 2923067
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||| ||||||| || ||||||||||||    
T  2923021 tatcaagagtcatatctatccgacgtgggacatgagtttttcccaat 2923067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26098587 - 26098541
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||| |||||||||| |  |||||||||||||||||||||||||||    
T  26098587 tatcatgagtcttatcaagacgatgtgggacttgggtttttcccaat 26098541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 15102818 - 15102862
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  15102818 atcaagagtctcatctatctgatgtgg-acttgggtttttcccaat 15102862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 2902855 - 2902819
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggttttt 66  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  2902855 aagagtcttatctatccgatgtaggacttgagttttt 2902819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 30526876 - 30526832
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggac-ttgggtttttccca 70  Q
    ||||||||||| |||||||||||||||||| || |||||||||||    
T  30526876 atcaagagtctcatctatccgatgtgggactttaggtttttccca 30526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 883668 - 883712
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  883668 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 883712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 12419875 - 12419831
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12419875 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 12419831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 12431935 - 12431891
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12431935 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 12431891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 17727441 - 17727397
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17727441 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 17727397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33985801 - 33985880
Alignment:
Q  1 tgtaaggtgaggattgcctcctctatat--------caagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||| |||||    
T  33985801 tgtaaggtgaggattgcctcctctttatactcttctcaagagtcttatctatccgatgtgggacttgggtttttgccaat 33985880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 39386709 - 39386663
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  39386709 tatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 39386663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 34775394 - 34775345
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaatccatc 77  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  34775394 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaatacatc 34775345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 884094 - 884050
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  884094 tcaagagtctcatctatccgatgtgggacttgggtttttcccaat 884050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 6986483 - 6986527
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  6986483 tcaagagtcttatctatccgatgtgggacttggatttttcccaat 6986527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 10570972 - 10570928
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  10570972 tcaagagtcttatctatctgatgtgggacttgggtttttcccaat 10570928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 16007014 - 16006970
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  16007014 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 16006970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 19859962 - 19859918
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  19859962 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 19859918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 19860074 - 19860030
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  19860074 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 19860030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 20999056 - 20999100
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  20999056 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 20999100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 25621352 - 25621396
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  25621352 tcaagagtcttatctatccgatgtgagacttgggtttttcccaat 25621396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 29695406 - 29695450
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  29695406 tcaagagtcttatctatccgatgtgagacttgggtttttcccaat 29695450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 33986042 - 33986086
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  33986042 tcaagagtcttatctatccgatgtgggagttgggtttttcccaat 33986086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 40010011 - 40009967
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  40010011 tcaagagttttatctatccgatgtgggacttgggtttttcccaat 40009967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26847084 - 26847154
Alignment:
Q  1 tgtaaggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||  ||||| ||| ||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  26847084 tgtaaggtgaggagagcctc-tctttatcaagagtcctatctatccaatgtgggacttgggttttttccaat 26847154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8044611 - 8044657
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||    
T  8044611 tatcaagagtcttatctatctgatgcgggacttgggtttttcccaat 8044657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 10485217 - 10485171
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  10485217 tatcaagagtcttatctatccgatgtgggacatggatttttcccaat 10485171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 32667222 - 32667176
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  32667222 tatcaagagtcttatctatctgatgtgggacttcggtttttcccaat 32667176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 21734453 - 21734409
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  21734453 tcaagagtcttatctatccgatgtgggatgtgggtttttcccaat 21734409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 31761169 - 31761125
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||| |||||||||||||||||||||||||| |||||||||||||    
T  31761169 tcaaaagtcttatctatccgatgtgggacttaggtttttcccaat 31761125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 4721869 - 4721911
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  4721869 tatcaagagtctaatctatccgatgtgggacatgggtttttcc 4721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 14127252 - 14127298
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||    
T  14127252 tatcaagagtcttatttatctgatgtgggacttcggtttttcccaat 14127298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 26847307 - 26847349
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  26847307 tatcaagagtcctatctatccaatgtgggacttgggtttttcc 26847349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 29676333 - 29676287
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||    
T  29676333 tatcaagagtcttatctatccgatgtgagacatgtgtttttcccaat 29676287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 32667016 - 32666970
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  32667016 tatcaagagtcttatttatccaatgagggacttgggtttttcccaat 32666970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 883887 - 883847
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  883887 tcaagagtcttgtctatccgatatgggacttgggtttttcc 883847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 3435553 - 3435597
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||    
T  3435553 tcaagagtcttatctatccgatgtgggacttgaattttttccaat 3435597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 7257675 - 7257719
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||| |||||||| | |||||||||||    
T  7257675 tcaagagtcttatctatccgatatgggacttagatttttcccaat 7257719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 12432142 - 12432098
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||    
T  12432142 tcaagattcttatctatccgatgtgggacttggattttttccaat 12432098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 17265043 - 17265079
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttt 65  Q
    |||||||||||||||||||||||||||| ||||||||    
T  17265043 caagagtcttatctatccgatgtgggacatgggtttt 17265079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27545183 - 27545227
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||    
T  27545183 tcaagagtcttatctatccgatgtgggacatggattttttccaat 27545227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 29684048 - 29684004
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||    
T  29684048 tcaagagtcttgtctatctgatgcgggacttgggtttttcccaat 29684004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 18607322 - 18607364
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||| ||||||||||||| |||||| ||||||||||||    
T  18607322 aagagtcttgtctatccgatgtgagacttgtgtttttcccaat 18607364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 22447344 - 22447298
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| |||||||||||| | |||| ||||||||||||||||||||    
T  22447344 tatcaaaagtcttatctattcaatgtaggacttgggtttttcccaat 22447298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 18901931 - 18901960
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggact 57  Q
    ||||||||||||||||||||||||||||||    
T  18901931 tcaagagtcttatctatccgatgtgggact 18901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 15518704 - 15518660
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||| ||| || ||| |||||||||||    
T  15518704 tcaagagtcttatctatccgatttggaacatggatttttcccaat 15518660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 31761366 - 31761330
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggttttt 66  Q
    |||||||||||||| |||||||||||||| |||||||    
T  31761366 aagagtcttatctacccgatgtgggacttaggttttt 31761330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 15392062 - 15392018
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15392062 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 15392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 39649151 - 39649195
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39649151 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 39649195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 52846916 - 52846960
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  52846916 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 52846960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 38871220 - 38871266
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  38871220 tatcaagagtcttatctatctgatgtgggacttgggtttttcccaat 38871266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 9380937 - 9380893
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  9380937 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 9380893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 24382218 - 24382262
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  24382218 tcaagagtcttatctatccgatgtgggacttgggattttcccaat 24382262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 29265955 - 29265911
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  29265955 tcaagagtcttatccatccgatgtgggacttgggtttttcccaat 29265911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 29273292 - 29273336
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  29273292 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 29273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 39648872 - 39648828
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  39648872 tcaagagtcttatctatccgatgtgggacttgggattttcccaat 39648828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 48558388 - 48558432
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  48558388 tcaagagtcttatctatccgatatgggacttgggtttttcccaat 48558432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 5222733 - 5222687
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  5222733 tatcaagagtcttatctatcagatgtgggacttaggtttttcccaat 5222687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 45395591 - 45395545
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  45395591 tatcaagagtcttatctatctgatatgggacttgggtttttcccaat 45395545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 47377874 - 47377828
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  47377874 tatcaagagtcttatctatccgatgtgggacatgagtttttcccaat 47377828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 1233964 - 1233919
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||    
T  1233964 atcaagagtctcatctatccgatgtgggacttgggtttttaccaat 1233919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 49828710 - 49828665
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||    
T  49828710 tatcaagagtcctatctatcagatgtgggacttgggtttttcccaa 49828665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 2997123 - 2997167
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  2997123 tcaagagttttatctatccgatgtgggacttaggtttttcccaat 2997167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 12314615 - 12314571
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  12314615 tcaagagtcttgtctatccgatgtgggacttggatttttcccaat 12314571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 22826810 - 22826850
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  22826810 tatcaagagtcttatctatccgatgtgggacatgggttttt 22826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 24382637 - 24382685
Alignment:
Q  30 aagagtcttatctatccgatgtgggacttgggtttttcccaatccatcc 78  Q
    ||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  24382637 aagagtcttatctatccgatgtgggacttggttttttctcaatacatcc 24382685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 39648945 - 39648988
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  39648945 tcaagagtcttatctatc-gatgtgggacttgggtttttcccaat 39648988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 49142714 - 49142675
Alignment:
Q  33 agtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  49142714 agtcttatctatccaatgtgggacttgggtttttcccaat 49142675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 52921535 - 52921578
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  52921535 caagagtactatctatccgatgtgggacttgggtttttcccaat 52921578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 15391785 - 15391747
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  15391785 tcaagagtcttatctatccgatgtgggacttggtttttt 15391747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 29413387 - 29413341
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||    
T  29413387 tatcaagagtcttatctacccgaagtaggacttgggtttttcccaat 29413341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 11581793 - 11581748
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||||    
T  11581793 atcaagagtcttatctatccgatgtgggatttgagttttttccaat 11581748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 29413181 - 29413136
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaa 71  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  29413181 tatcaagagtcttatctacccgaagtgggacttgggtctttcccaa 29413136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 43361619 - 43361656
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  43361619 tcaagagtcttgtctatccgatgtgggacttgggtttt 43361656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 43361824 - 43361861
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  43361824 tcaagagtcttgtctatccgatgtgggacttgggtttt 43361861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 2997328 - 2997368
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  2997328 tcaagagtcttatctatccgatgtgggatttgagtttttcc 2997368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 13959439 - 13959395
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  13959439 tcaagagtcttatctatccgatgtgagacttgcgttattcccaat 13959395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 22892467 - 22892532
Alignment:
Q  5 aggtgaggattgcctcctctatatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||| |||||||||| ||| ||   ||| ||||||| ||||||||||||||||||||||||||    
T  22892467 aggtgaggagtgcctcctctttataaac--tctcatctatctgatgtgggacttgggtttttcccaat 22892532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 25799157 - 25799113
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||    
T  25799157 tcaagagttttatctatctgatgtgggacatgggtttttcccaat 25799113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 38871014 - 38871061
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggactt-gggtttttcccaat 72  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  38871014 tatcaagagtcttatcgatctgatgtgggacttggggtttttcccaat 38871061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 20429039 - 20429073
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgg 60  Q
    ||||||||||||||| |||||||||||||||||||    
T  20429039 tatcaagagtcttatgtatccgatgtgggacttgg 20429073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 21428123 - 21428169
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||||||||||| |||| |||||||  |||||||||||    
T  21428123 tatcaagagtcttatctatccaatgtaggacttgaatttttcccaat 21428169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 30958701 - 30958655
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| |||||||| ||||||||||||||||| ||||||| |||||    
T  30958701 tatcaaaagtcttatatatccgatgtgggactttggttttttccaat 30958655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 42845086 - 42845128
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcc 68  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||    
T  42845086 tatcaagagtcttatctatctgatgtggtacttgagtttttcc 42845128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 45982221 - 45982175
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||    
T  45982221 tatcaagagttttatctatctgacgttggacttgggtttttcccaat 45982175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 47086342 - 47086388
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||| |||||||||| ||| ||||| |||||    
T  47086342 tatcaagagtcttatctatctgatgtgggacatggattttttccaat 47086388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 331478 - 331511
Alignment:
Q  38 tatctatccgatgtgggacttgggtttttcccaa 71  Q
    |||||||||||||||| |||||||||||||||||    
T  331478 tatctatccgatgtggtacttgggtttttcccaa 331511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 18374559 - 18374518
Alignment:
Q  31 agagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||| ||||||||| |||||||||||||||||||| ||||    
T  18374559 agagtcctatctatccaatgtgggacttgggtttttctcaat 18374518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 22892754 - 22892799
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| || |||  ||||||||||||||||||||||||||    
T  22892754 atcaagagtctcatttatttgatgtgggacttgggtttttcccaat 22892799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 24382426 - 24382471
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| || |||||||||| ||| ||||||||||||||||    
T  24382426 atcaagagtctcatttatccgatgttggatttgggtttttcccaat 24382471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 33342345 - 33342382
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttt 65  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  33342345 tcaagagtctcatctatctgatgtgggacttgggtttt 33342382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 36332349 - 36332304
Alignment:
Q  27 atcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||  ||||||||| |||||||||||| ||||||||||||    
T  36332349 atcaagagttctatctatccaatgtgggacttgcgtttttcccaat 36332304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 5324993 - 5325037
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||| |||||||| ||||||||||||||||||  |||||||||||    
T  5324993 tcaaaagtcttatttatccgatgtgggacttgaatttttcccaat 5325037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 6238157 - 6238193
Alignment:
Q  29 caagagtcttatctatccgatgtgggacttgggtttt 65  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  6238157 caagagtcttatctatccgatttgggacatgggtttt 6238193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 11590457 - 11590421
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggttt 64  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  11590457 tcaagagtcttgtctatccgatgtgggactcgggttt 11590421  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21539001 - 21539045
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||||| |||||||| |||||| ||| |||||||||||    
T  21539001 tcaagagtcttatttatccgatatgggacatggatttttcccaat 21539045  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 36331940 - 36331908
Alignment:
Q  40 tctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||| |||||||||||||||||||||||||    
T  36331940 tctatccaatgtgggacttgggtttttcccaat 36331908  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 40073341 - 40073301
Alignment:
Q  32 gagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||| ||||||||||||||| ||| |||||||||||    
T  40073341 gagtcttatatatccgatgtgggacatggatttttcccaat 40073301  T

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Target: scaffold0989 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 3014 - 3058
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  3014 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 3058  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 76889 - 76851
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    |||||||||||||||||||||||||||||||||||||||    
T  76889 tcaagagtcttatctatccgatgtgggacttgggttttt 76851  T

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Target: scaffold1138 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 1938 - 1978
Alignment:
Q  26 tatcaagagtcttatctatccgatgtgggacttgggttttt 66  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  1938 tatcaagagtcttatctatccgatgtgagacttgggttttt 1978  T

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Target: scaffold0434 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 13550 - 13506
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  13550 tcaagagtcttgtctatccgatttgggacttgggtttttcccaat 13506  T

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Target: scaffold0434; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 13343 - 13299
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||    
T  13343 tcaagagtcttgtctatccgatgtgggacctgagtttttcccaat 13299  T

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Target: scaffold0060 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 59552 - 59518
Alignment:
Q  38 tatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  59552 tatctatccgatgtgggacttgggtttttcccaat 59518  T

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Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 13699 - 13743
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggtttttcccaat 72  Q
    |||||||||| |||||||||||||| |||||| ||||| ||||||    
T  13699 tcaagagtctcatctatccgatgtgtgacttgagttttccccaat 13743  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21330 - 21375
Alignment:
Q  28 tcaagagtcttatctatccgatgtgggacttgggt-ttttcccaat 72  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  21330 tcaagagtcttgtctatccgatgtgggacttgggtattttcccaat 21375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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