View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0621_low_12 (Length: 343)

Name: NF0621_low_12
Description: NF0621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0621_low_12
NF0621_low_12
[»] chr8 (29 HSPs)
chr8 (218-325)||(45084244-45084351)
chr8 (220-325)||(483175-483280)
chr8 (220-333)||(8352381-8352493)
chr8 (220-325)||(35393539-35393644)
chr8 (220-325)||(36781653-36781758)
chr8 (220-325)||(20818956-20819061)
chr8 (220-323)||(33411046-33411150)
chr8 (220-323)||(27719243-27719346)
chr8 (218-325)||(38098802-38098909)
chr8 (220-325)||(11020404-11020509)
chr8 (220-325)||(25487242-25487347)
chr8 (220-325)||(29997495-29997600)
chr8 (222-325)||(30655004-30655107)
chr8 (218-314)||(5458259-5458355)
chr8 (220-325)||(26416317-26416422)
chr8 (220-325)||(30700034-30700139)
chr8 (220-324)||(24757787-24757890)
chr8 (220-322)||(12986672-12986774)
chr8 (220-334)||(20187473-20187586)
chr8 (220-334)||(20206542-20206655)
chr8 (220-321)||(39780313-39780415)
chr8 (230-325)||(32834600-32834695)
chr8 (220-304)||(31097516-31097600)
chr8 (221-324)||(1104963-1105066)
chr8 (219-315)||(13174238-13174334)
chr8 (244-325)||(18574818-18574900)
chr8 (244-316)||(20524967-20525038)
chr8 (221-264)||(16584425-16584468)
chr8 (231-265)||(29225979-29226013)
[»] chr2 (25 HSPs)
chr2 (220-325)||(11124353-11124458)
chr2 (220-325)||(21867003-21867108)
chr2 (218-324)||(19390592-19390698)
chr2 (220-325)||(2372112-2372217)
chr2 (220-325)||(30787163-30787268)
chr2 (218-326)||(12242742-12242850)
chr2 (218-325)||(2380311-2380418)
chr2 (220-325)||(17977766-17977872)
chr2 (220-333)||(8113689-8113805)
chr2 (220-325)||(14287471-14287576)
chr2 (220-325)||(26479872-26479977)
chr2 (229-325)||(2357348-2357444)
chr2 (220-319)||(33965471-33965570)
chr2 (228-322)||(31547297-31547391)
chr2 (220-324)||(41568727-41568831)
chr2 (220-323)||(20115063-20115166)
chr2 (220-334)||(4049461-4049573)
chr2 (220-321)||(6034413-6034515)
chr2 (220-325)||(25336526-25336631)
chr2 (222-325)||(1222643-1222746)
chr2 (222-324)||(39430280-39430382)
chr2 (220-325)||(11978764-11978869)
chr2 (228-264)||(43652940-43652976)
chr2 (230-264)||(17435366-17435400)
chr2 (221-269)||(35006460-35006508)
[»] scaffold0189 (1 HSPs)
scaffold0189 (218-325)||(27832-27939)
[»] chr6 (27 HSPs)
chr6 (218-325)||(5545371-5545478)
chr6 (220-325)||(4169666-4169771)
chr6 (220-325)||(4210395-4210500)
chr6 (220-325)||(17595889-17595994)
chr6 (220-325)||(33489794-33489899)
chr6 (218-325)||(32938426-32938533)
chr6 (220-321)||(10790493-10790594)
chr6 (220-325)||(34475145-34475250)
chr6 (229-325)||(742876-742972)
chr6 (218-318)||(12713118-12713218)
chr6 (222-325)||(33131158-33131261)
chr6 (220-325)||(8658989-8659097)
chr6 (219-325)||(8933830-8933936)
chr6 (220-322)||(29516667-29516769)
chr6 (220-324)||(8062791-8062895)
chr6 (220-324)||(18676728-18676833)
chr6 (220-325)||(28914150-28914255)
chr6 (218-316)||(11590246-11590344)
chr6 (218-324)||(2559730-2559835)
chr6 (230-334)||(9224609-9224712)
chr6 (218-324)||(9576029-9576135)
chr6 (218-315)||(20554819-20554916)
chr6 (231-290)||(8313817-8313876)
chr6 (218-266)||(25144159-25144207)
chr6 (230-265)||(13889149-13889184)
chr6 (226-264)||(26947088-26947126)
chr6 (281-325)||(29863953-29863997)
[»] chr3 (51 HSPs)
chr3 (218-325)||(26717990-26718097)
chr3 (220-325)||(13286931-13287036)
chr3 (220-325)||(30357252-30357357)
chr3 (220-325)||(35846748-35846853)
chr3 (220-325)||(37126654-37126759)
chr3 (220-325)||(38252520-38252625)
chr3 (220-325)||(51167200-51167305)
chr3 (220-325)||(51754424-51754529)
chr3 (218-325)||(22497239-22497346)
chr3 (222-325)||(24405774-24405877)
chr3 (218-325)||(43218755-43218862)
chr3 (218-325)||(48458385-48458492)
chr3 (220-325)||(1546207-1546312)
chr3 (220-325)||(24348804-24348909)
chr3 (220-325)||(44377783-44377888)
chr3 (220-323)||(10049140-10049243)
chr3 (230-333)||(12227766-12227869)
chr3 (218-321)||(17338506-17338609)
chr3 (220-325)||(5273603-5273708)
chr3 (220-325)||(8828639-8828744)
chr3 (220-325)||(10471377-10471482)
chr3 (228-325)||(10659535-10659632)
chr3 (220-325)||(20607714-20607819)
chr3 (220-325)||(27449492-27449597)
chr3 (228-325)||(43973254-43973351)
chr3 (220-325)||(46528091-46528196)
chr3 (220-325)||(47697769-47697874)
chr3 (220-325)||(55274170-55274275)
chr3 (220-322)||(31655046-31655148)
chr3 (220-322)||(37821063-37821165)
chr3 (223-325)||(49804884-49804986)
chr3 (220-325)||(998341-998446)
chr3 (222-325)||(23150742-23150845)
chr3 (218-325)||(53018980-53019087)
chr3 (220-325)||(9745945-9746049)
chr3 (220-324)||(2445962-2446066)
chr3 (220-325)||(41114127-41114232)
chr3 (218-317)||(501738-501837)
chr3 (220-322)||(28555193-28555295)
chr3 (220-324)||(8068546-8068650)
chr3 (220-304)||(26229373-26229457)
chr3 (218-325)||(35513083-35513190)
chr3 (220-320)||(3019203-3019303)
chr3 (218-325)||(41454245-41454352)
chr3 (253-323)||(33591124-33591194)
chr3 (220-325)||(26975498-26975594)
chr3 (220-288)||(5218974-5219042)
chr3 (218-290)||(9126350-9126421)
chr3 (218-290)||(9134457-9134528)
chr3 (229-266)||(31608390-31608427)
chr3 (222-258)||(9116495-9116531)
[»] chr1 (50 HSPs)
chr1 (222-325)||(15907242-15907345)
chr1 (220-325)||(50490803-50490908)
chr1 (189-325)||(13556046-13556182)
chr1 (218-325)||(3416304-3416411)
chr1 (218-325)||(25828675-25828782)
chr1 (220-325)||(26770145-26770250)
chr1 (220-325)||(48542572-48542677)
chr1 (220-328)||(30361156-30361264)
chr1 (218-322)||(40359665-40359769)
chr1 (220-324)||(44054838-44054942)
chr1 (220-325)||(3770505-3770610)
chr1 (220-325)||(15476000-15476105)
chr1 (220-325)||(28226363-28226468)
chr1 (220-325)||(42885268-42885373)
chr1 (230-325)||(28068849-28068944)
chr1 (218-325)||(46674743-46674850)
chr1 (220-325)||(8895623-8895728)
chr1 (220-325)||(37094172-37094277)
chr1 (220-325)||(52469453-52469558)
chr1 (220-325)||(44234046-44234153)
chr1 (218-325)||(47533999-47534106)
chr1 (220-321)||(35719711-35719813)
chr1 (220-325)||(6978903-6979008)
chr1 (220-325)||(45502373-45502477)
chr1 (220-325)||(46234352-46234457)
chr1 (220-320)||(3046763-3046863)
chr1 (221-324)||(18604860-18604963)
chr1 (220-321)||(24180584-24180686)
chr1 (218-304)||(25729961-25730047)
chr1 (220-322)||(49456839-49456941)
chr1 (220-321)||(4490165-4490266)
chr1 (220-325)||(17580903-17581008)
chr1 (220-325)||(31760722-31760827)
chr1 (220-325)||(3994890-3994994)
chr1 (220-325)||(20599615-20599720)
chr1 (220-299)||(11335634-11335713)
chr1 (220-299)||(11493654-11493733)
chr1 (218-324)||(7042878-7042984)
chr1 (220-325)||(30159014-30159119)
chr1 (218-314)||(17926221-17926317)
chr1 (229-324)||(8969475-8969570)
chr1 (229-325)||(43106550-43106653)
chr1 (218-314)||(49740084-49740180)
chr1 (230-289)||(12320252-12320311)
chr1 (270-325)||(29033685-29033740)
chr1 (219-265)||(17136896-17136942)
chr1 (218-250)||(641456-641488)
chr1 (221-269)||(14246544-14246592)
chr1 (221-269)||(24526945-24526993)
chr1 (221-269)||(45926252-45926300)
[»] chr7 (28 HSPs)
chr7 (220-325)||(9741251-9741356)
chr7 (220-325)||(18676781-18676886)
chr7 (220-325)||(31587943-31588048)
chr7 (220-325)||(47455052-47455157)
chr7 (189-325)||(40431300-40431436)
chr7 (220-325)||(30888417-30888522)
chr7 (222-321)||(31621940-31622039)
chr7 (218-325)||(42697406-42697513)
chr7 (218-324)||(42076334-42076440)
chr7 (220-325)||(44508505-44508611)
chr7 (220-325)||(3887672-3887777)
chr7 (220-325)||(5544329-5544434)
chr7 (220-325)||(12726243-12726348)
chr7 (220-325)||(12848442-12848547)
chr7 (220-325)||(40186731-40186836)
chr7 (220-325)||(41118802-41118907)
chr7 (220-325)||(47020494-47020599)
chr7 (227-325)||(44061817-44061915)
chr7 (220-334)||(44291054-44291167)
chr7 (218-325)||(3112100-3112207)
chr7 (220-325)||(9870427-9870532)
chr7 (220-322)||(38743257-38743353)
chr7 (230-299)||(40190120-40190188)
chr7 (218-265)||(38168132-38168179)
chr7 (219-260)||(39494885-39494926)
chr7 (229-280)||(10242424-10242475)
chr7 (230-271)||(27419112-27419153)
chr7 (221-285)||(25065987-25066050)
[»] chr5 (24 HSPs)
chr5 (220-325)||(3390852-3390957)
chr5 (220-325)||(41743381-41743486)
chr5 (220-324)||(18185763-18185867)
chr5 (218-325)||(1420968-1421075)
chr5 (218-325)||(42221725-42221832)
chr5 (220-325)||(33591715-33591820)
chr5 (220-325)||(42675679-42675784)
chr5 (220-323)||(10691933-10692036)
chr5 (219-325)||(36484621-36484727)
chr5 (220-325)||(8836551-8836656)
chr5 (220-325)||(15472687-15472792)
chr5 (220-325)||(25031425-25031530)
chr5 (220-325)||(35066065-35066169)
chr5 (220-325)||(23191904-23192009)
chr5 (218-323)||(29296186-29296291)
chr5 (220-322)||(27771283-27771385)
chr5 (230-319)||(8335330-8335419)
chr5 (230-325)||(6230235-6230330)
chr5 (220-322)||(28349035-28349137)
chr5 (218-318)||(8935914-8936014)
chr5 (218-314)||(33570101-33570197)
chr5 (218-314)||(8782715-8782811)
chr5 (219-315)||(25472320-25472416)
chr5 (221-269)||(24912764-24912812)
[»] chr4 (40 HSPs)
chr4 (218-325)||(11005633-11005740)
chr4 (218-325)||(49332113-49332220)
chr4 (218-325)||(54202330-54202437)
chr4 (218-325)||(56162473-56162580)
chr4 (218-324)||(27767617-27767723)
chr4 (189-323)||(29933516-29933650)
chr4 (220-325)||(7554421-7554526)
chr4 (220-325)||(22169111-22169216)
chr4 (221-325)||(35949483-35949587)
chr4 (218-325)||(2491831-2491938)
chr4 (222-321)||(36308988-36309087)
chr4 (222-325)||(50621666-50621769)
chr4 (220-325)||(24744971-24745076)
chr4 (220-321)||(36225118-36225219)
chr4 (220-325)||(39677686-39677791)
chr4 (218-326)||(26488351-26488458)
chr4 (230-325)||(29923613-29923708)
chr4 (218-325)||(43957840-43957947)
chr4 (230-325)||(45884570-45884665)
chr4 (220-322)||(55282456-55282558)
chr4 (220-325)||(3874551-3874656)
chr4 (220-325)||(7327677-7327782)
chr4 (220-325)||(17445641-17445746)
chr4 (220-320)||(3875651-3875751)
chr4 (229-325)||(55541835-55541931)
chr4 (230-325)||(28867696-28867791)
chr4 (220-325)||(3931969-3932075)
chr4 (220-309)||(20492505-20492594)
chr4 (220-321)||(33961786-33961887)
chr4 (220-321)||(36432472-36432572)
chr4 (218-314)||(11308766-11308862)
chr4 (218-309)||(11381916-11382007)
chr4 (220-290)||(28573784-28573854)
chr4 (219-325)||(44878043-44878149)
chr4 (230-322)||(41764674-41764765)
chr4 (219-316)||(7326428-7326526)
chr4 (221-269)||(15506585-15506633)
chr4 (218-284)||(7795306-7795370)
chr4 (218-262)||(7818464-7818508)
chr4 (221-269)||(28405744-28405792)
[»] scaffold0421 (2 HSPs)
scaffold0421 (35-156)||(13143-13264)
scaffold0421 (1-35)||(12734-12768)
[»] scaffold0562 (2 HSPs)
scaffold0562 (220-325)||(5370-5475)
scaffold0562 (220-320)||(6470-6570)
[»] scaffold0041 (1 HSPs)
scaffold0041 (220-325)||(105726-105831)
[»] scaffold1360 (1 HSPs)
scaffold1360 (220-325)||(964-1070)
[»] scaffold0057 (1 HSPs)
scaffold0057 (220-324)||(42703-42804)
[»] scaffold0081 (1 HSPs)
scaffold0081 (218-318)||(11110-11210)
[»] scaffold0548 (1 HSPs)
scaffold0548 (218-314)||(5256-5352)
[»] scaffold0025 (1 HSPs)
scaffold0025 (220-292)||(20394-20466)
[»] scaffold0237 (1 HSPs)
scaffold0237 (281-325)||(19650-19694)


Alignment Details
Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 45084244 - 45084351
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45084244 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 45084343  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  45084344 ttaccccc 45084351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 483280 - 483175
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  483280 agttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 483181  T
Q  320 accccc 325  Q
    ||||||    
T  483180 accccc 483175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 333
Target Start/End: Original strand, 8352381 - 8352493
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  8352381 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 8352480  T
Q  320 acccccctttcatc 333  Q
     |||||||||||||    
T  8352481 -cccccctttcatc 8352493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 35393644 - 35393539
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  35393644 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 35393545  T
Q  320 accccc 325  Q
    ||||||    
T  35393544 accccc 35393539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 36781653 - 36781758
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  36781653 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattttgaaccctt 36781752  T
Q  320 accccc 325  Q
    ||||||    
T  36781753 accccc 36781758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 20818956 - 20819061
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  20818956 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 20819055  T
Q  320 accccc 325  Q
    ||||||    
T  20819056 accccc 20819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 33411046 - 33411150
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaa-tttttaaaaatccatcttttatgatcattttgaaccct 318  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  33411046 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattttgaaccct 33411145  T
Q  319 taccc 323  Q
    |||||    
T  33411146 taccc 33411150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 27719243 - 27719346
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  27719243 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 27719342  T
Q  320 accc 323  Q
    ||||    
T  27719343 accc 27719346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 38098909 - 38098802
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  38098909 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 38098810  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  38098809 ttaccccc 38098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 11020404 - 11020509
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||    
T  11020404 agttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccctt 11020503  T
Q  320 accccc 325  Q
    ||||||    
T  11020504 accccc 11020509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 25487347 - 25487242
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  25487347 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaaccctt 25487248  T
Q  320 accccc 325  Q
    | ||||    
T  25487247 atcccc 25487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 29997495 - 29997600
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  29997495 agttacacccaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccctt 29997594  T
Q  320 accccc 325  Q
    ||||||    
T  29997595 accccc 29997600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 222 - 325
Target Start/End: Original strand, 30655004 - 30655107
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| |||||||||||    
T  30655004 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacctattttttatgatcattctgaacccttac 30655103  T
Q  322 cccc 325  Q
    ||||    
T  30655104 cccc 30655107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 5458259 - 5458355
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaa 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  5458259 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaa 5458355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 26416422 - 26416317
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||| |||||||||||||| ||| |||||||||    
T  26416422 agttacatccaaatttatttaaaattttacaataatatcaaaatggtcctcttcatgtaaatttctaaaaacccatcttttatgattattctgaaccctt 26416323  T
Q  320 accccc 325  Q
    ||||||    
T  26416322 accccc 26416317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 30700139 - 30700034
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||||||    
T  30700139 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctctttgtgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 30700040  T
Q  320 accccc 325  Q
    ||||||    
T  30700039 accccc 30700034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 24757890 - 24757787
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||| |||    
T  24757890 agttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaactctt 24757792  T
Q  320 acccc 324  Q
    |||||    
T  24757791 acccc 24757787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 12986672 - 12986774
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||    
T  12986672 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcgtgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 12986771  T
Q  320 acc 322  Q
    |||    
T  12986772 acc 12986774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 20187473 - 20187586
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  20187473 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 20187572  T
Q  320 acccccctttcatct 334  Q
    | |||||||||||||    
T  20187573 a-ccccctttcatct 20187586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 20206542 - 20206655
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  20206542 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 20206641  T
Q  320 acccccctttcatct 334  Q
    | |||||||||||||    
T  20206642 a-ccccctttcatct 20206655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 39780313 - 39780415
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattttgaaccct 318  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  39780313 agttacacccaaatttatttaaaattttataataatatcaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 39780412  T
Q  319 tac 321  Q
    |||    
T  39780413 tac 39780415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 325
Target Start/End: Original strand, 32834600 - 32834695
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  32834600 aaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaatccattttttatgattattctgaacccttatcccc 32834695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 31097516 - 31097600
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatga 304  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||    
T  31097516 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaacccatcttttatga 31097600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 221 - 324
Target Start/End: Complemental strand, 1105066 - 1104963
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctta 320  Q
    |||||| | |||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||| |||||||||||||| ||| ||||| || |    
T  1105066 gttacacctaaatttatttaaaattttacaataataccaaaattgctttcttcatgtaaattactaaaaacccatcttttatgataattctgaactctca 1104967  T
Q  321 cccc 324  Q
    ||||    
T  1104966 cccc 1104963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 315
Target Start/End: Original strand, 13174238 - 13174334
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaac 315  Q
    ||||||||  |||||||| ||||||||||||||||||||| |||||  |||||||| ||||||||||||||| || | ||| ||||||||| |||||    
T  13174238 tagttacactcaaatttacttaaaattttacaataataccgaaattagcctcttcaagtaaatttttaaaaacccttttttcatgatcattatgaac 13174334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 18574818 - 18574900
Alignment:
Q  244 ttttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc-catcttttatgatcattttgaacccttaccccc 325  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| | | ||||  || ||||||||||||||| ||||||    
T  18574818 ttttacaataataccaaaattaccctcttcatgtaaatttgtaaaaaactcttcttccattatcattttgaaccctcaccccc 18574900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 20524967 - 20525038
Alignment:
Q  244 ttttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacc 316  Q
    ||||||||||||||| |||||| | ||||||||||||||||| |||| || ||||| || |||| ||||||||    
T  20524967 ttttacaataataccgaaattgtcttcttcatgtaaattttttaaaa-ccttctttcattatcactttgaacc 20525038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 16584425 - 16584468
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaatt 264  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||    
T  16584425 gttacacccaaatttacttaaaattttataataataccaaaatt 16584468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 29226013 - 29225979
Alignment:
Q  231 aatttatttaaaattttacaataataccaaaattg 265  Q
    |||||||||||||||||||||||||| ||||||||    
T  29226013 aatttatttaaaattttacaataatatcaaaattg 29225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 11124458 - 11124353
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11124458 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 11124359  T
Q  320 accccc 325  Q
    ||||||    
T  11124358 accccc 11124353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 21867108 - 21867003
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21867108 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 21867009  T
Q  320 accccc 325  Q
    ||||||    
T  21867008 accccc 21867003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 19390698 - 19390592
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  19390698 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 19390599  T
Q  318 ttacccc 324  Q
    |||||||    
T  19390598 ttacccc 19390592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 2372217 - 2372112
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2372217 agttacatctaaatttatttaaacttttacaataatactaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 2372118  T
Q  320 accccc 325  Q
    ||||||    
T  2372117 accccc 2372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 30787268 - 30787163
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  30787268 agttacacccaaatttatttaaaattttacaataataccaaaattgccctattcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 30787169  T
Q  320 accccc 325  Q
    ||||||    
T  30787168 accccc 30787163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 12242742 - 12242850
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  12242742 ctagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 12242841  T
Q  318 ttacccccc 326  Q
    |||||||||    
T  12242842 ttacccccc 12242850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 2380418 - 2380311
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  2380418 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatcaatcttttatgatcattctgaaccc 2380319  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  2380318 ttaccccc 2380311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 17977872 - 17977766
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattttgaaccct 318  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  17977872 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 17977773  T
Q  319 taccccc 325  Q
    |||||||    
T  17977772 taccccc 17977766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 220 - 333
Target Start/End: Original strand, 8113689 - 8113805
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  8113689 agttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 8113788  T
Q  320 ac---ccccctttcatc 333  Q
    ||   ||||||||||||    
T  8113789 acttaccccctttcatc 8113805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 14287576 - 14287471
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||    
T  14287576 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccttt 14287477  T
Q  320 accccc 325  Q
    ||||||    
T  14287476 accccc 14287471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 26479977 - 26479872
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  26479977 agttacaccccaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccctt 26479878  T
Q  320 accccc 325  Q
    ||||||    
T  26479877 accccc 26479872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 325
Target Start/End: Original strand, 2357348 - 2357444
Alignment:
Q  229 caaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  2357348 caaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccccc 2357444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 33965570 - 33965471
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  33965570 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 33965471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 31547391 - 31547297
Alignment:
Q  228 ccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttacc 322  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31547391 ccaaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaattcatcttttatgatcattctgaacccttacc 31547297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 41568831 - 41568727
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  41568831 agttacacctaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaactcatcttttatgatcattttgaaccctt 41568732  T
Q  320 acccc 324  Q
    |||||    
T  41568731 acccc 41568727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 20115063 - 20115166
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| |||||||||||||||||| |||||| ||    
T  20115063 agttacacccaaatttatttaaaattttacaataataccaaaattttcctcttcatgtaaattttttaaaacccatcttttatgatcattctgaaccttt 20115162  T
Q  320 accc 323  Q
    ||||    
T  20115163 accc 20115166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 4049461 - 4049573
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  4049461 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcttcttcatgtaaatttttaaaaa-ccatcttttatgattattctgaaccctt 4049559  T
Q  320 acccccctttcatct 334  Q
    | |||||||||||||    
T  4049560 a-ccccctttcatct 4049573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 6034413 - 6034515
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattttgaaccct 318  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  6034413 agttacacccaaatttatttaaaattttataataatactaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 6034512  T
Q  319 tac 321  Q
    |||    
T  6034513 tac 6034515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 25336526 - 25336631
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||| ||| |||||| ||    
T  25336526 agttacacccaaatttatttaaaattttacaataatatcaaaattgtccttttcatgtaaatttttaaaaatctatcttttatgattattctgaaccttt 25336625  T
Q  320 accccc 325  Q
    ||||||    
T  25336626 accccc 25336631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 222 - 325
Target Start/End: Complemental strand, 1222746 - 1222643
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||||||||     
T  1222746 ttacacccaaatttatttagaattttacaataatactaaaattgctctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaacccttat 1222647  T
Q  322 cccc 325  Q
    ||||    
T  1222646 cccc 1222643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 39430382 - 39430280
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||  ||| ||||||||||||| |||||||||||    
T  39430382 ttacacccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaaatttctaaaaactcatattttatgatcattctgaacccttac 39430283  T
Q  322 ccc 324  Q
    |||    
T  39430282 ccc 39430280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 11978764 - 11978869
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||| |||| ||||||||||||| ||||| |||    
T  11978764 agttacacctaaatttatttaaaattttacaataataccaaaattgtcatctttctgtaaatttttaaaaacccattttttatgatcattctgaactctt 11978863  T
Q  320 accccc 325  Q
    | ||||    
T  11978864 atcccc 11978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 43652940 - 43652976
Alignment:
Q  228 ccaaatttatttaaaattttacaataataccaaaatt 264  Q
    |||||||||||||||||||||||||||||| ||||||    
T  43652940 ccaaatttatttaaaattttacaataatactaaaatt 43652976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 17435366 - 17435400
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaatt 264  Q
    ||||||||||||||||||||||||||| |||||||    
T  17435366 aaatttatttaaaattttacaataatatcaaaatt 17435400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 35006508 - 35006460
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccct 269  Q
    |||||| | ||||||| |||||| |||||||||||| ||||||||||||    
T  35006508 gttacacctaaatttacttaaaagtttacaataatatcaaaattgccct 35006460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 27939 - 27832
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  27939 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 27840  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  27839 ttaccccc 27832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 5545371 - 5545478
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  5545371 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 5545470  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  5545471 ttaccccc 5545478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 4169666 - 4169771
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  4169666 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 4169765  T
Q  320 accccc 325  Q
    ||||||    
T  4169766 accccc 4169771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 4210395 - 4210500
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  4210395 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 4210494  T
Q  320 accccc 325  Q
    ||||||    
T  4210495 accccc 4210500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 17595994 - 17595889
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  17595994 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 17595895  T
Q  320 accccc 325  Q
    ||||||    
T  17595894 accccc 17595889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 33489794 - 33489899
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  33489794 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 33489893  T
Q  320 accccc 325  Q
    ||||||    
T  33489894 accccc 33489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 32938533 - 32938426
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  32938533 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccc 32938434  T
Q  318 ttaccccc 325  Q
    ||| ||||    
T  32938433 ttatcccc 32938426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 10790493 - 10790594
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  10790493 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 10790592  T
Q  320 ac 321  Q
    ||    
T  10790593 ac 10790594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 34475145 - 34475250
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  34475145 agttacatctaaatttatttacaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 34475244  T
Q  320 accccc 325  Q
    ||||||    
T  34475245 accccc 34475250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 229 - 325
Target Start/End: Complemental strand, 742972 - 742876
Alignment:
Q  229 caaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  742972 caaatttatttaaaattttacaataataccaaaattgctctcttcgtgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccc 742876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 12713218 - 12713118
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||    
T  12713218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaccccatcttttatgatcattctgaaccc 12713119  T
Q  318 t 318  Q
    |    
T  12713118 t 12713118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 222 - 325
Target Start/End: Complemental strand, 33131261 - 33131158
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33131261 ttacacccaaatttatttaaatttttacaataatactaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 33131162  T
Q  322 cccc 325  Q
    ||||    
T  33131161 cccc 33131158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 8658989 - 8659097
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatctt---ttatgatcattttgaacc 316  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||   ||||||||||||||||||    
T  8658989 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatctttaattatgatcattttgaacc 8659088  T
Q  317 cttaccccc 325  Q
    |||||||||    
T  8659089 cttaccccc 8659097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 8933936 - 8933830
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccct 318  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||||    
T  8933936 tagttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccct 8933837  T
Q  319 taccccc 325  Q
    |||||||    
T  8933836 taccccc 8933830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 29516667 - 29516769
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||    
T  29516667 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaattcatcttttatgatcattttggactctt 29516766  T
Q  320 acc 322  Q
    |||    
T  29516767 acc 29516769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 8062791 - 8062895
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||| |||||||||||||||||| |||||||||    
T  8062791 agttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaattttctaaaaacccatcttttatgatcattctgaaccctt 8062890  T
Q  320 acccc 324  Q
    |||||    
T  8062891 acccc 8062895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 18676833 - 18676728
Alignment:
Q  220 agttacatccaaatttatttaaaatttt-acaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccct 318  Q
    ||||||| | |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  18676833 agttacacctaaatttatttaaaatttttataataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 18676734  T
Q  319 tacccc 324  Q
    ||||||    
T  18676733 tacccc 18676728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 28914255 - 28914150
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  28914255 agttacacctaaatttatttaaaattttacaataatatcaaaattactctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccctt 28914156  T
Q  320 accccc 325  Q
    ||||||    
T  28914155 accccc 28914150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 11590246 - 11590344
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacc 316  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||| || |||||| ||||||    
T  11590246 ctagttacacccaaatttatttaaaattttacaataataccaaaattacactcttcatgtaaatttctaaaaatccttctttcattatcattctgaacc 11590344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 2559730 - 2559835
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| | ||||| || ||||||||||||||    
T  2559730 ctagttacaccaaaatttatttaaaattttataataataccaaaattgccctcttcatgtcaatttctaaaaat-cttctttcattatcattttgaaccc 2559828  T
Q  318 ttacccc 324  Q
    | |||||    
T  2559829 tcacccc 2559835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 230 - 334
Target Start/End: Original strand, 9224609 - 9224712
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccccttt 329  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||| |||| || ||||| || ||||||||||||||| | ||||||||    
T  9224609 aaatttatttaaaattttacaacaatatcaaaattgtcctcttcatgtaaattttttaaaacccttctttcattatcattttgaaccctca-cccccttt 9224707  T
Q  330 catct 334  Q
    |||||    
T  9224708 catct 9224712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 9576029 - 9576135
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||| || ||||| || |||||| |||||||    
T  9576029 ctagttacacacaaatttatttaaaattttacaataatactaaaattgctctcatcatgtaaatttctaaaaacccttctttcattatcattctgaaccc 9576128  T
Q  318 ttacccc 324  Q
    | |||||    
T  9576129 tcacccc 9576135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 20554916 - 20554819
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaac 315  Q
    ||||||||||| |||||||||||||| | ||||||||||| |||||| |||||||||||||||||| ||||||  | ||||| || |||||| |||||    
T  20554916 ctagttacatctaaatttatttaaaactgtacaataatactaaaattaccctcttcatgtaaatttctaaaaactcttctttcattatcattctgaac 20554819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 8313876 - 8313817
Alignment:
Q  231 aatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa 290  Q
    ||||||| |||||||||||||||||| || ||||| ||||||||||||||||| ||||||    
T  8313876 aatttatataaaattttacaataatatcataattgtcctcttcatgtaaatttgtaaaaa 8313817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 25144207 - 25144159
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgc 266  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||    
T  25144207 ctagttacactcaaatttacttaaaattttacaataataccaaaattgc 25144159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 13889184 - 13889149
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattg 265  Q
    ||||||| ||||||||||||||||||||||||||||    
T  13889184 aaatttacttaaaattttacaataataccaaaattg 13889149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 26947088 - 26947126
Alignment:
Q  226 atccaaatttatttaaaattttacaataataccaaaatt 264  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  26947088 atccaaatttacttaaaagtttacaataataccaaaatt 26947126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 29863997 - 29863953
Alignment:
Q  281 tttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||| |||| ||||| ||||||| |||||||||||||||    
T  29863997 tttttaaaaacccattttttacgatcattctgaacccttaccccc 29863953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 5e-47; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 26718097 - 26717990
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26718097 ctagttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 26717998  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  26717997 ttaccccc 26717990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 13286931 - 13287036
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  13286931 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgataattttgaaccctt 13287030  T
Q  320 accccc 325  Q
    ||||||    
T  13287031 accccc 13287036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 30357252 - 30357357
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30357252 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 30357351  T
Q  320 accccc 325  Q
    ||||||    
T  30357352 accccc 30357357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 35846748 - 35846853
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  35846748 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 35846847  T
Q  320 accccc 325  Q
    ||||||    
T  35846848 accccc 35846853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 37126759 - 37126654
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  37126759 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 37126660  T
Q  320 accccc 325  Q
    ||||||    
T  37126659 accccc 37126654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 38252520 - 38252625
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  38252520 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 38252619  T
Q  320 accccc 325  Q
    ||||||    
T  38252620 accccc 38252625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 51167305 - 51167200
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  51167305 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaaccctt 51167206  T
Q  320 accccc 325  Q
    ||||||    
T  51167205 accccc 51167200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 51754424 - 51754529
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  51754424 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 51754523  T
Q  320 accccc 325  Q
    ||||||    
T  51754524 accccc 51754529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 22497239 - 22497346
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22497239 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 22497338  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  22497339 ttaccccc 22497346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 222 - 325
Target Start/End: Original strand, 24405774 - 24405877
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  24405774 ttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 24405873  T
Q  322 cccc 325  Q
    ||||    
T  24405874 cccc 24405877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 43218755 - 43218862
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43218755 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 43218854  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  43218855 ttaccccc 43218862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 48458385 - 48458492
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  48458385 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 48458484  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  48458485 ttaccccc 48458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 1546312 - 1546207
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  1546312 agttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 1546213  T
Q  320 accccc 325  Q
    ||||||    
T  1546212 accccc 1546207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 24348804 - 24348909
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  24348804 agttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 24348903  T
Q  320 accccc 325  Q
    ||||||    
T  24348904 accccc 24348909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 44377783 - 44377888
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44377783 agttacacctaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 44377882  T
Q  320 accccc 325  Q
    ||||||    
T  44377883 accccc 44377888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 10049243 - 10049140
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  10049243 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattatgaaccctt 10049144  T
Q  320 accc 323  Q
    ||||    
T  10049143 accc 10049140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 12227869 - 12227766
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccccttt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  12227869 aaatttatttaaaattttacaataataccaaaattgccctcttcacgtaaatttttaaaaacccatcttttatgattattctgaacccttaccccccttt 12227770  T
Q  330 catc 333  Q
    ||||    
T  12227769 catc 12227766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 17338609 - 17338506
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17338609 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 17338510  T
Q  318 ttac 321  Q
    ||||    
T  17338509 ttac 17338506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 5273708 - 5273603
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  5273708 agttacacccaaatttatttaaaattttacaataataccgaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 5273609  T
Q  320 accccc 325  Q
    ||||||    
T  5273608 accccc 5273603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 8828744 - 8828639
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  8828744 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcgtcatgtaaatttttaaaaacccatcttttatgatcattctgaactctt 8828645  T
Q  320 accccc 325  Q
    ||||||    
T  8828644 accccc 8828639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 10471482 - 10471377
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||    
T  10471482 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccttt 10471383  T
Q  320 accccc 325  Q
    ||||||    
T  10471382 accccc 10471377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 228 - 325
Target Start/End: Original strand, 10659535 - 10659632
Alignment:
Q  228 ccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  10659535 ccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcgtttacgatcattctgaacccttaccccc 10659632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 20607819 - 20607714
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  20607819 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 20607720  T
Q  320 accccc 325  Q
    ||||||    
T  20607719 accccc 20607714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 27449492 - 27449597
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27449492 agttacatctaaatttatttaaaattttacaataataccaaaatttccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 27449591  T
Q  320 accccc 325  Q
    | ||||    
T  27449592 atcccc 27449597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 228 - 325
Target Start/End: Complemental strand, 43973351 - 43973254
Alignment:
Q  228 ccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  43973351 ccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccccc 43973254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 46528091 - 46528196
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  46528091 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 46528190  T
Q  320 accccc 325  Q
    ||||||    
T  46528191 accccc 46528196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 47697769 - 47697874
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  47697769 agttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccctt 47697868  T
Q  320 accccc 325  Q
    ||||||    
T  47697869 accccc 47697874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 55274275 - 55274170
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||    
T  55274275 agttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattatgaactctt 55274176  T
Q  320 accccc 325  Q
    ||||||    
T  55274175 accccc 55274170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 31655046 - 31655148
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  31655046 agttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 31655145  T
Q  320 acc 322  Q
    |||    
T  31655146 acc 31655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 37821063 - 37821165
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  37821063 agttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccgt 37821162  T
Q  320 acc 322  Q
    |||    
T  37821163 acc 37821165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 49804986 - 49804884
Alignment:
Q  223 tacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttacc 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  49804986 tacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaacccttacc 49804887  T
Q  323 ccc 325  Q
    |||    
T  49804886 ccc 49804884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 998446 - 998341
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| |||| ||||||||||||| |||||||||    
T  998446 agttacatccaaatttatttaaaattttacaataatactaaaattgccatcttcatgtaaatttctaaaaacccatgttttatgatcattctgaaccctt 998347  T
Q  320 accccc 325  Q
    ||||||    
T  998346 accccc 998341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 222 - 325
Target Start/End: Original strand, 23150742 - 23150845
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||     
T  23150742 ttacacccatatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctaaacccttat 23150841  T
Q  322 cccc 325  Q
    ||||    
T  23150842 cccc 23150845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 53018980 - 53019087
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||| || |||||||    
T  53018980 ctagttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatgtttaaaaacccatcttttatgatcgttctgaaccc 53019079  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  53019080 ttaccccc 53019087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 9745945 - 9746049
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| || |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  9745945 agttacacccgaatttatttaaa-ttttacaataatactaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 9746043  T
Q  320 accccc 325  Q
    ||||||    
T  9746044 accccc 9746049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 2445962 - 2446066
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||| |||||||||    
T  2445962 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtgaatttttaaaaacccatattttatgatcattctgaaccctt 2446061  T
Q  320 acccc 324  Q
    |||||    
T  2446062 acccc 2446066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 41114232 - 41114127
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||| | |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  41114232 agttacattcgaatttatttaaaattttacaataatatcaaaattatcctcttcatgtaaatttttaaaaatttatcttttatgatcattctgaaccctt 41114133  T
Q  320 accccc 325  Q
    ||||||    
T  41114132 accccc 41114127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 501738 - 501837
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  501738 ctagttacatccaaatttatttaaaattttacaataatatcaaaattgttctcttcatgtaaatttctaaaaactcatcttttatgatcattctgaaccc 501837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 28555295 - 28555193
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||   |||||||||||||||| |||||||||    
T  28555295 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttctaaaaacttatcttttatgatcattctgaaccctt 28555196  T
Q  320 acc 322  Q
    |||    
T  28555195 acc 28555193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 8068650 - 8068546
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||  ||| ||||||||| ||| |||||||||    
T  8068650 agttacacccaaatttatttaaaattttacaataataccaagattgccctcttcatgtaaatttcttaaaactcatattttatgattattctgaaccctt 8068551  T
Q  320 acccc 324  Q
    |||||    
T  8068550 acccc 8068546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 26229373 - 26229457
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatga 304  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  26229373 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatgtttaaaaacccatcttttatga 26229457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 35513190 - 35513083
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||| || |||||| ||||||     
T  35513190 ctagttacatctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtagatttttaaaaacccttctttcattatcattctgaacct 35513091  T
Q  318 ttaccccc 325  Q
    | ||||||    
T  35513090 tcaccccc 35513083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 3019203 - 3019303
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||| | ||||||||||||||||||||||  |||||||||| |||||| |||||||||    
T  3019203 agttacatctaaatttatttaaaattttacaataatattaaaattgtcatcttcatgtaaatttttaaaaactcatcttttataatcattctgaaccctt 3019302  T
Q  320 a 320  Q
    |    
T  3019303 a 3019303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 41454245 - 41454352
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| | | ||||||||||||  |||||| |||||||||||||||||| ||||||     
T  41454245 ctagttacacctaaatttatttaaaattttacaataataccaaaattgtctttttcatgtaaattactaaaaacccatcttttatgatcattctgaacct 41454344  T
Q  318 ttaccccc 325  Q
    | ||||||    
T  41454345 tcaccccc 41454352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 33591124 - 33591194
Alignment:
Q  253 aataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccc 323  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  33591124 aataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccc 33591194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 26975594 - 26975498
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||         ||||||||||||||||||||||||||||||||||| |||||||||    
T  26975594 agttacacctaaatttatttaaaattttactataatatcaaaattg---------tgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 26975504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 5218974 - 5219042
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa 288  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||||    
T  5218974 agttacacccaaatttatttaaaattttacaataataccaaaattgccccctccatctaaatttctaaa 5219042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 9126421 - 9126350
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa 290  Q
    ||||||||| | ||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  9126421 ctagttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattttttaaaa 9126350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 9134528 - 9134457
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa 290  Q
    ||||||||| | ||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  9134528 ctagttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattttttaaaa 9134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 31608427 - 31608390
Alignment:
Q  229 caaatttatttaaaattttacaataataccaaaattgc 266  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  31608427 caaatttacttaaaattttataataataccaaaattgc 31608390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 9116531 - 9116495
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataatacc 258  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  9116531 ttacacccaaatttacttaaaattttacaataatacc 9116495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 5e-47; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 222 - 325
Target Start/End: Original strand, 15907242 - 15907345
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15907242 ttacatcaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaacccttac 15907341  T
Q  322 cccc 325  Q
    ||||    
T  15907342 cccc 15907345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 50490803 - 50490908
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  50490803 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 50490902  T
Q  320 accccc 325  Q
    ||||||    
T  50490903 accccc 50490908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 13556046 - 13556182
Alignment:
Q  189 gaccggtgctagtcacacaccnnnnnnnnctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa 288  Q
    |||||||||||||||||| ||        ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13556046 gaccggtgctagtcacaccccaaaaaaaactagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtcaatttttaaa 13556145  T
Q  289 aatccatcttttatgatcattttgaacccttaccccc 325  Q
    || |||||||||||||||||| |||||||||||||||    
T  13556146 aacccatcttttatgatcattctgaacccttaccccc 13556182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 3416304 - 3416411
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  3416304 ctagttatatccaaatttatttaaaattttacaataataccaaaatcgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaaccc 3416403  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  3416404 ttaccccc 3416411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 25828675 - 25828782
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  25828675 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccc 25828774  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  25828775 ttaccccc 25828782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 26770250 - 26770145
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  26770250 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 26770151  T
Q  320 accccc 325  Q
    ||||||    
T  26770150 accccc 26770145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 48542677 - 48542572
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  48542677 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacacatcttttatgatcattctgaaccctt 48542578  T
Q  320 accccc 325  Q
    ||||||    
T  48542577 accccc 48542572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 30361156 - 30361264
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  30361156 agttacattcaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaaccctt 30361255  T
Q  320 acccccctt 328  Q
    |||||||||    
T  30361256 acccccctt 30361264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 40359665 - 40359769
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  40359665 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 40359764  T
Q  318 ttacc 322  Q
    |||||    
T  40359765 ttacc 40359769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 44054942 - 44054838
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  44054942 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattttgaaccctt 44054843  T
Q  320 acccc 324  Q
    |||||    
T  44054842 acccc 44054838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 3770505 - 3770610
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3770505 agttacacctaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3770604  T
Q  320 accccc 325  Q
    ||||||    
T  3770605 accccc 3770610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 15476105 - 15476000
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  15476105 agttacacccaaatttatttaaaattttacaataatacaaaaattgccctcttcatgtaaatttttaaaaacccatcttttattatcattctgaaccctt 15476006  T
Q  320 accccc 325  Q
    ||||||    
T  15476005 accccc 15476000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 28226468 - 28226363
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  28226468 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccctt 28226369  T
Q  320 accccc 325  Q
    ||||||    
T  28226368 accccc 28226363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 42885268 - 42885373
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  42885268 agttacacccaaatttatttaaaattttacaataatacaaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 42885367  T
Q  320 accccc 325  Q
    ||||||    
T  42885368 accccc 42885373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 230 - 325
Target Start/End: Complemental strand, 28068944 - 28068849
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  28068944 aaatttatttaaaattttacaataataccaaacttgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccccc 28068849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 46674743 - 46674850
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  46674743 ctagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaatcccatcttttatgatcattctgaaccc 46674842  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  46674843 ttaccccc 46674850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 8895623 - 8895728
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  8895623 agttacacccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 8895722  T
Q  320 accccc 325  Q
    ||||||    
T  8895723 accccc 8895728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 37094277 - 37094172
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||||||| |||||||||    
T  37094277 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccctcttttacgatcattctgaaccctt 37094178  T
Q  320 accccc 325  Q
    ||||||    
T  37094177 accccc 37094172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 52469558 - 52469453
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||| ||    
T  52469558 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattatgaaccatt 52469459  T
Q  320 accccc 325  Q
    ||||||    
T  52469458 accccc 52469453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 44234153 - 44234046
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataata--ccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  44234153 agttacacccaaatttatttaaaattttacaataatataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccc 44234054  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  44234053 ttaccccc 44234046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 47533999 - 47534106
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  47533999 ctagttacactcaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 47534098  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  47534099 ttaccccc 47534106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 35719711 - 35719813
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattttgaaccct 318  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  35719711 agttacacccaaatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 35719810  T
Q  319 tac 321  Q
    |||    
T  35719811 tac 35719813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 6978903 - 6979008
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||| |||    
T  6978903 agttacacccaaatttatttaaaattttacaataatatcaaaattgccttcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactctt 6979002  T
Q  320 accccc 325  Q
    ||||||    
T  6979003 accccc 6979008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 45502477 - 45502373
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  45502477 agttacacccaaatttaattaaa-ttttataataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 45502379  T
Q  320 accccc 325  Q
    ||||||    
T  45502378 accccc 45502373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 46234457 - 46234352
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  46234457 agttacatttaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 46234358  T
Q  320 accccc 325  Q
    ||||||    
T  46234357 accccc 46234352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 3046763 - 3046863
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  3046763 agttacatctaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 3046862  T
Q  320 a 320  Q
    |    
T  3046863 a 3046863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 221 - 324
Target Start/End: Original strand, 18604860 - 18604963
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctta 320  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||| |||||||| |    
T  18604860 gttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattactaaaaacccatcttttatgatcattctgaaccctca 18604959  T
Q  321 cccc 324  Q
    ||||    
T  18604960 cccc 18604963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 24180686 - 24180584
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattttgaaccct 318  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  24180686 agttacacccaaatttatttaaaattttataataataccaaaattgcccttttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 24180587  T
Q  319 tac 321  Q
    |||    
T  24180586 tac 24180584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 25730047 - 25729961
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatga 304  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  25730047 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatga 25729961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 49456839 - 49456941
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  49456839 agttacatttaaatttatttaaaattttacaataatactaaaattatcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 49456938  T
Q  320 acc 322  Q
    |||    
T  49456939 acc 49456941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 4490266 - 4490165
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  4490266 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttctaaaaactcatcttttatgatcattctgaaccctt 4490167  T
Q  320 ac 321  Q
    ||    
T  4490166 ac 4490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 17581008 - 17580903
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |||||| | |||||||||||||||| ||||| |||    
T  17581008 agttacatccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaattttctaaaaacctatcttttatgatcattctgaactctt 17580909  T
Q  320 accccc 325  Q
    ||||||    
T  17580908 accccc 17580903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 31760827 - 31760722
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||  ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  31760827 agttacactcaaatttatttaaaattttacaataatataaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 31760728  T
Q  320 accccc 325  Q
    ||||||    
T  31760727 accccc 31760722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 3994994 - 3994890
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||| |||||||||||||||||| ||||| |||    
T  3994994 agttacacccaaatttatttaaaattttacaataataccaaa-ttgtcatcttcatgaaaatttttaaaaacccatcttttatgatcattctgaacactt 3994896  T
Q  320 accccc 325  Q
    ||||||    
T  3994895 accccc 3994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 20599720 - 20599615
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||   || ||||||||||||| |||||||||    
T  20599720 agttacacccaaatttatttaaaattttacaataatactaaaattgttctcttcatgtaaatttttaaaaacttatattttatgatcattctgaaccctt 20599621  T
Q  320 accccc 325  Q
    ||||||    
T  20599620 accccc 20599615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 11335713 - 11335634
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttt 299  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11335713 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttt 11335634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 11493733 - 11493654
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttt 299  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11493733 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttt 11493654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 7042984 - 7042878
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |  ||||| || ||||||||||||||    
T  7042984 ctagttacacctaaatttatttaaaatcttacaataataccaaaattgccctcttcatgtaaatttctaaaaaccattctttcattatcattttgaaccc 7042885  T
Q  318 ttacccc 324  Q
    | |||||    
T  7042884 tcacccc 7042878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 30159014 - 30159119
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||  ||||||||||||||||| ||||| |||    
T  30159014 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactctt 30159113  T
Q  320 accccc 325  Q
    | ||||    
T  30159114 atcccc 30159119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 17926317 - 17926221
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaa 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| | | ||| ||||||||| |||||| |||||||||||||||||| ||||    
T  17926317 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcgtgtaaatttctaaaaacccatcttttatgatcattctgaa 17926221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 8969475 - 8969570
Alignment:
Q  229 caaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttacccc 324  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||| || |||||| |||||||| |||||    
T  8969475 caaatttatttaaaattttacaataatactaaaatttccctcttcatgtaaatttctaaaaatccttctttcattatcattctgaaccctcacccc 8969570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 325
Target Start/End: Complemental strand, 43106653 - 43106550
Alignment:
Q  229 caaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttt-------taaaaatccatcttttatgatcattttgaacccttac 321  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||||||||||       |||||| | |||||||||||||||| |||||||||||    
T  43106653 caaatttatttaaaattttacaataatatcaaaagtgtcctcttcatgtaaatttttaaattttaaaaacctatcttttatgatcattctgaacccttac 43106554  T
Q  322 cccc 325  Q
    ||||    
T  43106553 cccc 43106550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 49740084 - 49740180
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaa 314  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| | | ||||||||||||| |||||| ||||||| ||| |||||| ||||    
T  49740084 ctagttacatttaaatttatttaaaattttacaataatatcaaaattgtcatgttcatgtaaatttctaaaaacccatcttatataatcattctgaa 49740180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 12320311 - 12320252
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaa 289  Q
    ||||||| ||||||||||||||||||| |||||||| | |||  ||||||||||||||||    
T  12320311 aaatttacttaaaattttacaataatatcaaaattgtcttctcaatgtaaatttttaaaa 12320252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 29033740 - 29033685
Alignment:
Q  270 cttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||   || ||||||||||||| |||||||||||||||    
T  29033740 cttcatgtaaatttttaaaaacttattttttatgatcattctgaacccttaccccc 29033685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 17136896 - 17136942
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaaaattg 265  Q
    |||||||||  ||||||||||||||||||| ||||||||| ||||||    
T  17136896 tagttacatttaaatttatttaaaattttataataataccgaaattg 17136942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 641456 - 641488
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttaca 250  Q
    ||||||||| |||||||||||||||||||||||    
T  641456 ctagttacacccaaatttatttaaaattttaca 641488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 14246544 - 14246592
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccct 269  Q
    ||||||||||||||| ||||||| |||   |||||||||||||||||||    
T  14246544 gttacatccaaatttttttaaaagttttttataataccaaaattgccct 14246592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 24526945 - 24526993
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccct 269  Q
    |||||||||||||||  |||||| |||  ||||||||||||||||||||    
T  24526945 gttacatccaaattttcttaaaagtttttaataataccaaaattgccct 24526993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 45926300 - 45926252
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccct 269  Q
    |||||| | ||||||| |||||| |||||||||||||||||||| ||||    
T  45926300 gttacacctaaatttacttaaaagtttacaataataccaaaattaccct 45926252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 8e-46; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 9741356 - 9741251
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  9741356 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 9741257  T
Q  320 accccc 325  Q
    ||||||    
T  9741256 accccc 9741251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 18676886 - 18676781
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18676886 agttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 18676787  T
Q  320 accccc 325  Q
    ||||||    
T  18676786 accccc 18676781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 31588048 - 31587943
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  31588048 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 31587949  T
Q  320 accccc 325  Q
    ||||||    
T  31587948 accccc 31587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 47455052 - 47455157
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  47455052 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 47455151  T
Q  320 accccc 325  Q
    ||||||    
T  47455152 accccc 47455157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 189 - 325
Target Start/End: Complemental strand, 40431436 - 40431300
Alignment:
Q  189 gaccggtgctagtcacacaccnnnnnnnnctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa 288  Q
    |||||||||||||||||| ||        ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  40431436 gaccggtgctagtcacaccccaaaaaaaactagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaa 40431337  T
Q  289 aatccatcttttatgatcattttgaacccttaccccc 325  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40431336 aatccatcttttatgatcattctgaacccttaccccc 40431300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 30888522 - 30888417
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||||    
T  30888522 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatattttatgatcattctgaaccctt 30888423  T
Q  320 accccc 325  Q
    ||||||    
T  30888422 accccc 30888417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 222 - 321
Target Start/End: Original strand, 31621940 - 31622039
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  31621940 ttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaacccttac 31622039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 42697406 - 42697513
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  42697406 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaattcatcttttatgatcattctgaaccc 42697505  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  42697506 ttaccccc 42697513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 42076334 - 42076440
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  42076334 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccg 42076433  T
Q  318 ttacccc 324  Q
    |||||||    
T  42076434 ttacccc 42076440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 44508505 - 44508611
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaa-tttttaaaaatccatcttttatgatcattttgaaccct 318  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  44508505 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattctgaaccct 44508604  T
Q  319 taccccc 325  Q
    |||||||    
T  44508605 taccccc 44508611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 3887672 - 3887777
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3887672 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3887771  T
Q  320 accccc 325  Q
    ||||||    
T  3887772 accccc 3887777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 5544434 - 5544329
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  5544434 agttacacccaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 5544335  T
Q  320 accccc 325  Q
    ||||||    
T  5544334 accccc 5544329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 12726348 - 12726243
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  12726348 agttacacccgaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 12726249  T
Q  320 accccc 325  Q
    ||||||    
T  12726248 accccc 12726243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 12848442 - 12848547
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||    
T  12848442 agttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccctt 12848541  T
Q  320 accccc 325  Q
    ||||||    
T  12848542 accccc 12848547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 40186836 - 40186731
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||    
T  40186836 agttacatccaaatttatttaaaattttataataataccaaaagtgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactctt 40186737  T
Q  320 accccc 325  Q
    ||||||    
T  40186736 accccc 40186731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 41118907 - 41118802
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  41118907 agttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccctt 41118808  T
Q  320 accccc 325  Q
    ||||||    
T  41118807 accccc 41118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 47020599 - 47020494
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  47020599 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 47020500  T
Q  320 accccc 325  Q
    ||||||    
T  47020499 accccc 47020494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 227 - 325
Target Start/End: Original strand, 44061817 - 44061915
Alignment:
Q  227 tccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  44061817 tccaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaacccttaccccc 44061915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 44291054 - 44291167
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  44291054 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 44291153  T
Q  320 acccccctttcatct 334  Q
    | |||||||||||||    
T  44291154 a-ccccctttcatct 44291167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 3112207 - 3112100
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||| | |||||||||||||||| ||||||     
T  3112207 ctagttacacccaaatttatttaaaattttacaataataccaaaattaccatcttcatgtaaattactaaaaacctatcttttatgatcattatgaacct 3112108  T
Q  318 ttaccccc 325  Q
    | ||||||    
T  3112107 tcaccccc 3112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 9870532 - 9870427
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||| ||| |||| |||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||| |||||| ||||| |||    
T  9870532 agttacatccaaattaattaaaaagtttacaataataacaaaattgtcctcttcatgtaaatttctaaaaacccatcttttattatcattctgaacactt 9870433  T
Q  320 accccc 325  Q
    | ||||    
T  9870432 atcccc 9870427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 38743353 - 38743257
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||      |||| |||||||||||||||||||||||||||| |||||||||    
T  38743353 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctc------taaaattttaaaaatccatcttttatgatcattctgaaccctt 38743260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 40190188 - 40190120
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttt 299  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||| ||||||||    
T  40190188 aaatttatttaaaattt-acaataatatcaaaattgccctcttcatataaatttctaaaaacccatcttt 40190120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 38168179 - 38168132
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattg 265  Q
    ||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  38168179 ctagttacatccaaaattacttaaaattttacaaaaataccaaaattg 38168132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 39494885 - 39494926
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaa 260  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  39494885 tagttacacctaaatttatttaaaattttacaataataccaa 39494926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 10242475 - 10242424
Alignment:
Q  229 caaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaa 280  Q
    |||||||| ||||||||| |||||||||||||||||  | ||||||||||||    
T  10242475 caaatttacttaaaatttgacaataataccaaaattatcatcttcatgtaaa 10242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 27419153 - 27419112
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctct 271  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||    
T  27419153 aaatttacttaaaattttataataataccaaaattgctctct 27419112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 25065987 - 25066050
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttt 285  Q
    |||||||| ||||||| || |||||| ||||||||||||||||| | || ||||| |||||||||    
T  25065987 gttacatctaaatttacttgaaatttcacaataataccaaaattactct-ttcatataaattttt 25066050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 8e-46; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 3390957 - 3390852
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3390957 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3390858  T
Q  320 accccc 325  Q
    ||||||    
T  3390857 accccc 3390852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 41743486 - 41743381
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41743486 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattttgaaccctt 41743387  T
Q  320 accccc 325  Q
    | ||||    
T  41743386 atcccc 41743381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 18185763 - 18185867
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  18185763 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaactctt 18185862  T
Q  320 acccc 324  Q
    |||||    
T  18185863 acccc 18185867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 1420968 - 1421075
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||    
T  1420968 ctagttacctccaaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatcttttatgatcattctgaaccc 1421067  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  1421068 ttaccccc 1421075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 42221725 - 42221832
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  42221725 ctagttacactcaaatttatttaaaattttacaataataccaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 42221824  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  42221825 ttaccccc 42221832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 33591820 - 33591715
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  33591820 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcctt 33591721  T
Q  320 accccc 325  Q
    ||||||    
T  33591720 accccc 33591715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 42675784 - 42675679
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  42675784 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 42675685  T
Q  320 accccc 325  Q
    ||||||    
T  42675684 accccc 42675679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 10692036 - 10691933
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  10692036 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 10691937  T
Q  320 accc 323  Q
    ||||    
T  10691936 accc 10691933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 36484727 - 36484621
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccct 318  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36484727 tagttacacctaaatttatttaaatttttacaataataccaaaattgtccttttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 36484628  T
Q  319 taccccc 325  Q
    |||||||    
T  36484627 taccccc 36484621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 8836656 - 8836551
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  8836656 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 8836557  T
Q  320 accccc 325  Q
    ||||||    
T  8836556 accccc 8836551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 15472792 - 15472687
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  15472792 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccctt 15472693  T
Q  320 accccc 325  Q
    ||||||    
T  15472692 accccc 15472687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 25031425 - 25031530
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  25031425 agttacacccaaatttatttaaaattttacaataatatcaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcctt 25031524  T
Q  320 accccc 325  Q
    ||||||    
T  25031525 accccc 25031530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 35066169 - 35066065
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  35066169 agttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaaccctt 35066071  T
Q  320 accccc 325  Q
    ||||||    
T  35066070 accccc 35066065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 23192009 - 23191904
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  23192009 agttacacccaaatttgtttaaaattttataataatactaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 23191910  T
Q  320 accccc 325  Q
    ||||||    
T  23191909 accccc 23191904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 29296186 - 29296291
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||| |    
T  29296186 ctagttacatctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactc 29296285  T
Q  318 ttaccc 323  Q
    ||||||    
T  29296286 ttaccc 29296291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 27771385 - 27771283
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||||| ||||| |||    
T  27771385 agttacatccaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaaaacccatcttttatgatcattctgaactctt 27771286  T
Q  320 acc 322  Q
    |||    
T  27771285 acc 27771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 8335330 - 8335419
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  8335330 aaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 8335419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 230 - 325
Target Start/End: Original strand, 6230235 - 6230330
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||| ||||    
T  6230235 aaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactcatattttatgatcattctgaacccttatcccc 6230330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 28349035 - 28349137
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||| ||| |||||||||    
T  28349035 agttacacctaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaaaacccatcttttatgatgattctgaaccctt 28349134  T
Q  320 acc 322  Q
    |||    
T  28349135 acc 28349137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 8936014 - 8935914
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |  ||||| || |||||| |||||||    
T  8936014 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaaccattctttcattatcattctgaaccc 8935915  T
Q  318 t 318  Q
    |    
T  8935914 t 8935914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 33570197 - 33570101
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaa 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| |||||| ||| |||||||||||||| ||||    
T  33570197 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcatgtaaatttctaaaaacccaccttttatgatcattctgaa 33570101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 8782811 - 8782715
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaa 314  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| | | ||||||||||||| |||||| |||||||| ||||||||| ||||    
T  8782811 ctagttacacccaaatttatttaaaattttacaataatactaaaattgtcttgttcatgtaaatttctaaaaacccatctttcatgatcattctgaa 8782715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 315
Target Start/End: Complemental strand, 25472416 - 25472320
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaac 315  Q
    |||||||| ||||||||||||||||||||| ||||||||  |||   |||||||||| |||| || |||||| |||| ||| ||||||||| |||||    
T  25472416 tagttacacccaaatttatttaaaattttataataatactgaaaccaccctcttcatttaaaattctaaaaacccatttttcatgatcattctgaac 25472320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 24912812 - 24912764
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccct 269  Q
    |||||||||||||||| |||||| |||||| |||||| |||||||||||    
T  24912812 gttacatccaaatttacttaaaagtttacattaatactaaaattgccct 24912764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 11005740 - 11005633
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  11005740 ctagttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 11005641  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  11005640 ttaccccc 11005633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 49332220 - 49332113
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49332220 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 49332121  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  49332120 ttaccccc 49332113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 54202330 - 54202437
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  54202330 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 54202429  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  54202430 ttaccccc 54202437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 56162473 - 56162580
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  56162473 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 56162572  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  56162573 ttaccccc 56162580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 27767723 - 27767617
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  27767723 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 27767624  T
Q  318 ttacccc 324  Q
    |||||||    
T  27767623 ttacccc 27767617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 189 - 323
Target Start/End: Complemental strand, 29933650 - 29933516
Alignment:
Q  189 gaccggtgctagtcacacaccnnnnnnnnctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa 288  Q
    |||||||||||||||||| ||        ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29933650 gaccggtgctagtcacaccccaaaaaaaactagttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa 29933551  T
Q  289 aatccatcttttatgatcattttgaacccttaccc 323  Q
    || |||||||||||||| ||| |||||||||||||    
T  29933550 aacccatcttttatgattattctgaacccttaccc 29933516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 7554526 - 7554421
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7554526 agttacacccaaatttatttcaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 7554427  T
Q  320 accccc 325  Q
    ||||||    
T  7554426 accccc 7554421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 22169111 - 22169216
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22169111 agttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 22169210  T
Q  320 accccc 325  Q
    | ||||    
T  22169211 atcccc 22169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 35949587 - 35949483
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctta 320  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  35949587 gttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 35949488  T
Q  321 ccccc 325  Q
    |||||    
T  35949487 ccccc 35949483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 2491831 - 2491938
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  2491831 ctagttacacccaaatttatttaaaatttaacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 2491930  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  2491931 ttaccccc 2491938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 222 - 321
Target Start/End: Complemental strand, 36309087 - 36308988
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  36309087 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 36308988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 222 - 325
Target Start/End: Original strand, 50621666 - 50621769
Alignment:
Q  222 ttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttac 321  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  50621666 ttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 50621765  T
Q  322 cccc 325  Q
    ||||    
T  50621766 cccc 50621769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 24745076 - 24744971
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  24745076 agttacacccaaatttatttacaattttacaataataccaaaattgccctcttcatataaatttttaaaaatccatcttttataatcattctgaaccctt 24744977  T
Q  320 accccc 325  Q
    ||||||    
T  24744976 accccc 24744971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 36225219 - 36225118
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  36225219 agttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaactctt 36225120  T
Q  320 ac 321  Q
    ||    
T  36225119 ac 36225118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 39677791 - 39677686
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  39677791 agttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 39677692  T
Q  320 accccc 325  Q
    ||||||    
T  39677691 accccc 39677686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 26488351 - 26488458
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  26488351 ctagttacacccaaatttatttcaaattt-acaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 26488449  T
Q  318 ttacccccc 326  Q
    |||||||||    
T  26488450 ttacccccc 26488458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 230 - 325
Target Start/End: Original strand, 29923613 - 29923708
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29923613 aaatttatttaaaattttacaataatactaaaattgccctcttcatgtaaatttttaaaaacctatcttttatgatcattttgaacccttaccccc 29923708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 43957947 - 43957840
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||    
T  43957947 ctagttacccccaaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatcttttatgatcattctgaaccc 43957848  T
Q  318 ttaccccc 325  Q
    ||||||||    
T  43957847 ttaccccc 43957840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 230 - 325
Target Start/End: Original strand, 45884570 - 45884665
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45884570 aaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccc 45884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 55282558 - 55282456
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||    
T  55282558 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaattttttaaaaacccatattttatgatcattctgaaccctt 55282459  T
Q  320 acc 322  Q
    |||    
T  55282458 acc 55282456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 3874656 - 3874551
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  3874656 agttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 3874557  T
Q  320 accccc 325  Q
    ||||||    
T  3874556 accccc 3874551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 7327782 - 7327677
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||| | ||    
T  7327782 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaatcttt 7327683  T
Q  320 accccc 325  Q
    ||||||    
T  7327682 accccc 7327677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 17445746 - 17445641
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  17445746 agttacacccaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 17445647  T
Q  320 accccc 325  Q
    ||||||    
T  17445646 accccc 17445641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 3875751 - 3875651
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  3875751 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccctt 3875652  T
Q  320 a 320  Q
    |    
T  3875651 a 3875651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 325
Target Start/End: Original strand, 55541835 - 55541931
Alignment:
Q  229 caaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  55541835 caaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaaattttaaaaacccatcttttatgatcattctgaacccttaccccc 55541931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 230 - 325
Target Start/End: Complemental strand, 28867791 - 28867696
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  28867791 aaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaacccttaccccc 28867696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 3932075 - 3931969
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc-catcttttatgatcattttgaaccct 318  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  3932075 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctcatcttttatgatcattctgaaccct 3931976  T
Q  319 taccccc 325  Q
    |||||||    
T  3931975 taccccc 3931969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 20492505 - 20492594
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcatt 309  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  20492505 agttacatcgaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcatt 20492594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 33961887 - 33961786
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||| |||||||| |||||||||    
T  33961887 agttacacctaaatttatttaaaattttacaataatatcaaaattgccatcttcatgtaaatttttaaaaactcatcttttctgatcattctgaaccctt 33961788  T
Q  320 ac 321  Q
    ||    
T  33961787 ac 33961786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 36432572 - 36432472
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  36432572 agttacacctaaatttatttaaaattttacaataacgtcaaaattgccctcttcatgtaaatttttaaaaa-ccatcttttatgatcattctgaaccctt 36432474  T
Q  320 ac 321  Q
    ||    
T  36432473 ac 36432472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 11308766 - 11308862
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaa 314  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||    
T  11308766 ctagttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaaaacccatcttttatgatcattctgaa 11308862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 11382007 - 11381916
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcatt 309  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||| ||||||  |||||||||||||||||    
T  11382007 ctagttatatccaaatttatttaaaattttacaataatatcaaaattgctctgttcaagtaaatttctaaaaactcatcttttatgatcatt 11381916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 28573854 - 28573784
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa 290  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  28573854 agttacacccaaatttatttaaaattttacagtaatatcaaaattgccctcttcatgtaaatttttaaaaa 28573784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 44878043 - 44878149
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccct 318  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| || |||  |||||||||||||| || |||||| |    
T  44878043 tagttacattcaaatttatttaaaaatttacaataatactaaaattgtcctcttcatgtaaatttctagaaactcatcttttatgatcgttctgaacctt 44878142  T
Q  319 taccccc 325  Q
     ||||||    
T  44878143 caccccc 44878149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 41764765 - 41764674
Alignment:
Q  230 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaacccttacc 322  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||   |||||||||||||||| ||||| ||||||    
T  41764765 aaatttatttaaaattttacaataatatcaaaattgtc-tcttcatgtaaatttttaaaaacttatcttttatgatcattctgaactcttacc 41764674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 7326526 - 7326428
Alignment:
Q  219 tagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattttgaacc 316  Q
    |||||||| ||||||||||||||||||||| ||||||||  |||||||||||| |||||||| || ||||||  |||| ||| ||||||||||||||||    
T  7326526 tagttacacccaaatttatttaaaattttagaataatactgaaattgccctctccatgtaaaattctaaaaaccccatttttcatgatcattttgaacc 7326428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 15506633 - 15506585
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccct 269  Q
    |||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  15506633 gttacacccaaatttacttaaaattttataataatacaaaaattgccct 15506585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 7795370 - 7795306
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttt 284  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||| || ||| ||||| ||||||||    
T  7795370 ctagttacacccaaatttatt-aaaattttataataataccaaaactg-ccttttcatataaatttt 7795306  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 7818508 - 7818464
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaa 262  Q
    ||||||||| ||||||||| |||||| |||| |||||||||||||    
T  7818508 ctagttacacccaaatttacttaaaaatttataataataccaaaa 7818464  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 28405744 - 28405792
Alignment:
Q  221 gttacatccaaatttatttaaaattttacaataataccaaaattgccct 269  Q
    |||||||||||||||  ||||||||||   |||||||||||||||||||    
T  28405744 gttacatccaaattttcttaaaatttttttataataccaaaattgccct 28405792  T

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Target: scaffold0421 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 13143 - 13264
Alignment:
Q  35 catgaaattaatcaatggaaatcaacacccagagcacagcagatgcaagcttataattttagatagaattttggatatcaaatttgagtttctttacgta 134  Q
    |||| ||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  13143 catggaattaatcaatggaaatcaacacctggattacagcagatgcaagcttataattttagatagaattttggatatcaaatttcattttctttacgta 13242  T
Q  135 tacttttcggatacaagtaaca 156  Q
    | ||||| ||||||||||||||    
T  13243 tgcttttaggatacaagtaaca 13264  T

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Target: scaffold0421; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 12734 - 12768
Alignment:
Q  1 tttgtttaaaaccatcattctttttcttgtattac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  12734 tttgtttaaaaccatcattctttttcttgtattac 12768  T

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Target: scaffold0562 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 5475 - 5370
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  5475 agttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 5376  T
Q  320 accccc 325  Q
    ||||||    
T  5375 accccc 5370  T

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Target: scaffold0562; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 6570 - 6470
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  6570 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccctt 6471  T
Q  320 a 320  Q
    |    
T  6470 a 6470  T

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Target: scaffold0041 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 105831 - 105726
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  105831 agttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccctt 105732  T
Q  320 accccc 325  Q
    ||||||    
T  105731 accccc 105726  T

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Target: scaffold1360 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 1070 - 964
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc-catcttttatgatcattttgaaccct 318  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  1070 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctcatcttttatgatcattctgaaccct 971  T
Q  319 taccccc 325  Q
    |||||||    
T  970 taccccc 964  T

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Target: scaffold0057 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 42804 - 42703
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 319  Q
    |||||||  |||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  42804 agttacactcaaatttatttaaaattttacaata---ccaaaattgccctcttcatgtaaattttaaaaactccatcttttatgatcattttgaaccctt 42708  T
Q  320 acccc 324  Q
    |||||    
T  42707 acccc 42703  T

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Target: scaffold0081 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 11110 - 11210
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 317  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||| |||||||||||||||||| |||||||    
T  11110 ctagttacatctaaatttatttaaaattttacaataataacaaaattgccctcttcatgtatattactaaaaacccatcttttatgatcattctgaaccc 11209  T
Q  318 t 318  Q
    |    
T  11210 t 11210  T

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Target: scaffold0548 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 5256 - 5352
Alignment:
Q  218 ctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaa 314  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||    
T  5256 ctagttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaaaacccatcttttatgatcattctgaa 5352  T

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Target: scaffold0025 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 20466 - 20394
Alignment:
Q  220 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc 292  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  20466 agttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttaatgtaaatttttaaaaatc 20394  T

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Target: scaffold0237 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 19694 - 19650
Alignment:
Q  281 tttttaaaaatccatcttttatgatcattttgaacccttaccccc 325  Q
    |||||||||| |||| ||||| ||||||| |||||||||||||||    
T  19694 tttttaaaaacccattttttacgatcattctgaacccttaccccc 19650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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