View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0621_low_2 (Length: 919)

Name: NF0621_low_2
Description: NF0621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0621_low_2
NF0621_low_2
[»] chr5 (4 HSPs)
chr5 (30-485)||(40800954-40801409)
chr5 (562-912)||(40801555-40801905)
chr5 (443-485)||(40801438-40801480)
chr5 (443-485)||(40801509-40801551)
[»] chr6 (2 HSPs)
chr6 (512-912)||(18701127-18701527)
chr6 (207-475)||(18701578-18701846)
[»] chr8 (6 HSPs)
chr8 (762-912)||(23126087-23126237)
chr8 (292-465)||(17882624-17882796)
chr8 (578-751)||(5461023-5461196)
chr8 (308-368)||(5461361-5461421)
chr8 (852-901)||(29633943-29633992)
chr8 (852-901)||(40389878-40389927)
[»] chr1 (4 HSPs)
chr1 (303-475)||(2248663-2248833)
chr1 (245-368)||(14138413-14138535)
chr1 (35-130)||(2248968-2249062)
chr1 (156-215)||(2248911-2248971)
[»] chr2 (4 HSPs)
chr2 (303-478)||(24866704-24866879)
chr2 (512-643)||(24866526-24866657)
chr2 (857-900)||(24864512-24864555)
chr2 (808-854)||(24864640-24864685)
[»] chr4 (2 HSPs)
chr4 (512-673)||(50379400-50379561)
chr4 (35-150)||(9813631-9813743)


Alignment Details
Target: chr5 (Bit Score: 404; Significance: 0; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 30 - 485
Target Start/End: Original strand, 40800954 - 40801409
Alignment:
Q  30 gtttgcatgtgatttgagtccttattcgataattgtcccaaagggtgaaaggaaacgacgaagaggaaaggaagatggttacatattagaaaatatggtt 129  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40800954 gtttgcatgtgatttgagtccttattccataattgtcgcaaagggtgaaaggaaacgacgaagaggaaaggaagatggttacatattagtaaatatggtt 40801053  T
Q  130 ttaagatgtttgaagttttcaggtatgtttgatgctcaataaatatcaaacttcctttaacataaaaggtggttatgtatcagtaattgggaaatgtata 229  Q
    | |||||| |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40801054 taaagatgcttgaagttttcaagtatatttgatgctcaataaatatctaacttcctttaacataaaaggtggttacgtatcagtaattgggaaatgtata 40801153  T
Q  230 agaatatttacttagataatattttatttgatttctccaaatttggtaagttagcatcactgttgcaacatggtaactttgtacatctactcctttcaat 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40801154 agaatatttacttagataatattttatttgatttctccaaatttggtaagttagcatcactgttacaacatggtaactttgtacatctactcctttcaat 40801253  T
Q  330 tttacattacaactgttacattaatttaggttggagaaacaaccttaaagagtgaaaattggtgtcagtgtggagtaactgccatcaattaagatacaca 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  40801254 tttacattacaactgttacattaatttaggttggagaaacaaccttaaagagtgaaaattggtgtcaatgtggagtaactgccatcaactaagatacaca 40801353  T
Q  430 gagaggtttcgtaatagttttaaatgtatgctacaagaatttaattgtaacaaggg 485  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40801354 gagaggtttcttaatagttttaaatgtatgctacaagaatttaattgtaacaaggg 40801409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 562 - 912
Target Start/End: Original strand, 40801555 - 40801905
Alignment:
Q  562 gcaatatatagataccagagggattatagtttcttaaggaatggcctgaaacaaagtaataacaaaaatatgaagaaatacataatatcaacggagcatc 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40801555 gcaatatatagataccagagggattatagtttcttaaggaatggcctgaaacagagtaataacaaaaatatgaagaaatacataatatcaacggagcatc 40801654  T
Q  662 acaacaatgtttctgtaatggaaaaactaagattgtgatatttgatataggcagcaggactatgaaagccacatagagttggtgttggaacgttggtctt 761  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40801655 acaacaatgtttttgtaatggaaaaactaagattgtgatatttgatataggcagcaggactatgaaagccacatagagttggtgttggaacgttggtctt 40801754  T
Q  762 tctcctttgaggaagagaaatgagaaaaggggaaggtttgtcgtccttggccaccgacgaaaagtatcaatgtgcatcaaggttctaccattaatcaaga 861  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  40801755 tctcctttgaggaagagaaatgagaaaaggggaaggtttgtcgtcattggccatcggcgaaaagtatcaatgtgcatcaaggttctaccattaatcaaga 40801854  T
Q  862 agaaagtgttcaaaatgattttctatttcatactatgatcaagtattatct 912  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40801855 aaaaagtgttcaaaatgattttctatttcatactatgatcaagtataatct 40801905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 40801438 - 40801480
Alignment:
Q  443 atagttttaaatgtatgctacaagaatttaattgtaacaaggg 485  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  40801438 atagttttaaatgtatactacaagaatttaattgtaacaaggg 40801480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 40801509 - 40801551
Alignment:
Q  443 atagttttaaatgtatgctacaagaatttaattgtaacaaggg 485  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  40801509 atagttttaaatgtatactacaagaatttaattgtaacaaggg 40801551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 341; Significance: 0; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 512 - 912
Target Start/End: Complemental strand, 18701527 - 18701127
Alignment:
Q  512 aatctgcttattttgttctaaataatatttcagaaacacaataactgagagcaatatatagataccagagggattatagtttcttaaggaatggcctgaa 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  18701527 aatctgcttattttgttctaaataatatttcagaaacacaataactcagagcgatatatagataccagagggaatattgtttcttaaggaatggcctgaa 18701428  T
Q  612 acaaagtaataacaaaaatatgaagaaatacataatatcaacggagcatcacaacaatgtttctgtaatggaaaaactaagattgtgatatttgatatag 711  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  18701427 atagagtaataacaaaaatatgaagaaatacataatatcaacggagcatcacaacaatgtttttgtaatggaaaatctaagattgtgatatttgatatag 18701328  T
Q  712 gcagcaggactatgaaagccacatagagttggtgttggaacgttggtctttctcctttgaggaagagaaatgagaaaaggggaaggtttgtcgtccttgg 811  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  18701327 gcagcaggactatgaaagccacatagagtcggtgttagaacgttggtctttctcttgtgaggaagagaaatgagaaaaggggatggtttgtcgtccttgg 18701228  T
Q  812 ccaccgacgaaaagtatcaatgtgcatcaaggttctaccattaatcaagaagaaagtgttcaaaatgattttctatttcatactatgatcaagtattatc 911  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18701227 ccaccggcgaaaagtatcaatgtgcatcaaggttctaccattaatcaagaagaaagtgttcaaaatgattttctatttcatactatgatcaagtataatc 18701128  T
Q  912 t 912  Q
    |    
T  18701127 t 18701127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 207 - 475
Target Start/End: Complemental strand, 18701846 - 18701578
Alignment:
Q  207 tatcagtaattgggaaatgtataagaatatttacttagataatattttatttgatttctccaaatttggtaagttagcatcactgttgcaacatggtaac 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18701846 tatcagtaattgggaaatgtataagaatatttacttagataatattttatttgatttctccaaatttggtaagttagcatcacttttgcaacatggtaac 18701747  T
Q  307 tttgtacatctactcctttcaattttacattacaactgttacattaatttaggttggagaaacaaccttaaagagtgaaaattggtgtcagtgtggagta 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  18701746 tttgtacatctactcctttcaattttacattacaactgttacattaatttacgttggagaaacaaccttaaagagtgaaaattggtgtcaatgtggagta 18701647  T
Q  407 actgccatcaattaagatacacagagaggtttcgtaatagttttaaatgtatgctacaagaatttaatt 475  Q
    |||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  18701646 actgccattagctaagatacacagagaggtttcctaatagttttaaatgtatgctacaagaattcaatt 18701578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 7e-70; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 762 - 912
Target Start/End: Original strand, 23126087 - 23126237
Alignment:
Q  762 tctcctttgaggaagagaaatgagaaaaggggaaggtttgtcgtccttggccaccgacgaaaagtatcaatgtgcatcaaggttctaccattaatcaaga 861  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23126087 tctcctttgaggaagagaaatgagaaaaggggaaggtttgtcgtccttggccaccggcgaaaagtatcaatgtgcatcaaggttctaccattaatcaaga 23126186  T
Q  862 agaaagtgttcaaaatgattttctatttcatactatgatcaagtattatct 912  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  23126187 agaaagtattcaaaatgattttctatttcatattatgatcaagtataatct 23126237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 292 - 465
Target Start/End: Original strand, 17882624 - 17882796
Alignment:
Q  292 ttgcaacatggtaactttgtacatctactcctttcaattttacattacaactgttacattaatttaggttggagaaacaaccttaaagagtgaaaattgg 391  Q
    ||||| |||||||||| ||||||| |||| ||||  ||||||| ||||||||||||||||| |||| | ||||||||||||||||||||| | |||||||    
T  17882624 ttgcagcatggtaactgtgtacatttacttctttttattttaccttacaactgttacattattttacg-tggagaaacaaccttaaagaggggaaattgg 17882722  T
Q  392 tgtcagtgtggagtaactgccatcaattaagatacacagagaggtttcgtaatagttttaaatgtatgctacaa 465  Q
    || || ||  |||   |||| ||||   |||||| ||||||||||||| | || | ||| ||||||||||||||    
T  17882723 tggcaatgcagaggggctgctatcagccaagatagacagagaggtttcctcatcgctttcaatgtatgctacaa 17882796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 578 - 751
Target Start/End: Complemental strand, 5461196 - 5461023
Alignment:
Q  578 agagggattatagtttcttaaggaatggcctgaaacaaagtaataacaaaaatatgaagaaatacataatatcaacggagcatcacaacaatgtttctgt 677  Q
    ||||||||||| ||||||| ||||||| || |||||||||  || | ||||||| ||||||||    | |||| ||||||| |  |||||| |||| |||    
T  5461196 agagggattatggtttcttgaggaatgtcccgaaacaaagagatcaaaaaaataggaagaaatttggattatcgacggagctttgcaacaacgtttttgt 5461097  T
Q  678 aatggaaaaactaagattgtgatatttgatataggcagcaggactatgaaagccacatagagttggtgttggaa 751  Q
    |||||||||||| |||||| ||||| || || | ||| ||| ||||| |||||  || | ||| ||||||||||    
T  5461096 aatggaaaaactgagattgggatatatggtacatgcaacagtactataaaagcagcacatagtcggtgttggaa 5461023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 5461421 - 5461361
Alignment:
Q  308 ttgtacatctactcctttcaattttacattacaactgttacattaatttaggttggagaaa 368  Q
    |||||||| || | ||||| ||||||| ||||||||||| ||||| |||||||||||||||    
T  5461421 ttgtacatttattactttctattttaccttacaactgttccattattttaggttggagaaa 5461361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 852 - 901
Target Start/End: Original strand, 29633943 - 29633992
Alignment:
Q  852 ttaatcaagaagaaagtgttcaaaatgattttctatttcatactatgatc 901  Q
    |||||||||||||||||| ||||||  |||||||||||| ||||| ||||    
T  29633943 ttaatcaagaagaaagtgctcaaaagcattttctatttcctactacgatc 29633992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 852 - 901
Target Start/End: Original strand, 40389878 - 40389927
Alignment:
Q  852 ttaatcaagaagaaagtgttcaaaatgattttctatttcatactatgatc 901  Q
    |||||||||||||||||| ||||||  |||||||||||| ||||| ||||    
T  40389878 ttaatcaagaagaaagtgctcaaaagcattttctatttcctactacgatc 40389927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 1e-28; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 303 - 475
Target Start/End: Complemental strand, 2248833 - 2248663
Alignment:
Q  303 taactttgtacatctactcctttcaattttacattacaactgttacattaatttaggttggagaaacaaccttaaagagtgaaaattggtgtcagtgtgg 402  Q
    ||||||||||||| |||| ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||| ||  |    
T  2248833 taactttgtacatttactactttcgattttaccttacaactgttacattattttaggttggagaaacaaccttaaagtgtggaaattggagtcaatgaag 2248734  T
Q  403 agtaactgccatcaattaagatacacagagaggtttcgtaatagttttaaatgtatgctacaagaatttaatt 475  Q
    || | ||||||||    |||||| |||||||  |||| | || ||||| |||||||| |||||||||| ||||    
T  2248733 aggagctgccatcggccaagatagacagaga--tttcctcattgttttcaatgtatgatacaagaattgaatt 2248663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 368
Target Start/End: Original strand, 14138413 - 14138535
Alignment:
Q  245 ataatattttatttgatttctccaaatttggtaagttagcatcactgttgcaacatggtaactttgtacatctactcctttcaattttacattacaactg 344  Q
    ||||| |||||||| |||||||||| ||||||| |||| | ||| ||||||| |||||||||||| || || |||| ||||| || |||| |||||||||    
T  14138413 ataatcttttatttaatttctccaactttggtatgttaccttcattgttgcagcatggtaactttctaaatttactactttctatgttaccttacaactg 14138512  T
Q  345 ttacattaatttaggttggagaaa 368  Q
    ||||| || |||||||||||||||    
T  14138513 ttaca-tattttaggttggagaaa 14138535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 2249062 - 2248968
Alignment:
Q  35 catgtgatttgagtccttattcgataattgtcccaaagggtgaaaggaaacgacgaagaggaaaggaagatggttacatattagaaaatatggttt 130  Q
    ||||| ||||||||||| |||  ||||||||  ||||||||||||||| || |||||||||||||||||   ||||||||| || |||||||||||    
T  2249062 catgtcatttgagtcctaatttcataattgttgcaaagggtgaaaggagac-acgaagaggaaaggaaggcagttacatatcagtaaatatggttt 2248968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 2248971 - 2248911
Alignment:
Q  156 gtttgatgctcaataaatatcaaac-ttcctttaacataaaaggtggttatgtatcagtaa 215  Q
    ||||||||||||||||||||| ||| ||| ||||||  |||||||||||| ||||||||||    
T  2248971 gtttgatgctcaataaatatctaactttcgtttaacgaaaaaggtggttacgtatcagtaa 2248911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 4e-25; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 303 - 478
Target Start/End: Complemental strand, 24866879 - 24866704
Alignment:
Q  303 taactttgtacatctactcctttcaattttacattacaactgttacattaatttaggttggagaaacaaccttaaagagtgaaaattggtgtcagtgtgg 402  Q
    ||||||||||||| |||| ||||| ||||||| ||||||||||||||||| ||||||||||||| ||| ||| |||||||  |||||||||||| ||  |    
T  24866879 taactttgtacatttactactttctattttaccttacaactgttacattattttaggttggagatacagcctgaaagagtagaaattggtgtcaatgcag 24866780  T
Q  403 agtaactgccatcaattaagatacacagagaggtttcgtaatagttttaaatgtatgctacaagaatttaattgta 478  Q
    ||  |||||||||    |||| | ||| ||||||||| | || |||||  |||||| ||||||||||| |||||||    
T  24866779 agggactgccatcggccaagaaagacatagaggtttcctcattgttttcgatgtatactacaagaattgaattgta 24866704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 512 - 643
Target Start/End: Complemental strand, 24866657 - 24866526
Alignment:
Q  512 aatctgcttattttgttctaaataatatttcagaaacacaataactgagagcaatatatagataccagagggattatagtttcttaaggaatggcctgaa 611  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||| | |||||||| ||||||  ||||||||||| |||| || |||||||||  | |    
T  24866657 aatcttcttattttattctaactaatatttcaaaaacacaataacttatagcaatatgtagatatgagagggattatggttttttgaggaatggctggga 24866558  T
Q  612 acaaagtaataacaaaaatatgaagaaataca 643  Q
    ||| ||  |||||||| |||||| ||||||||    
T  24866557 acatagagataacaaatatatgatgaaataca 24866526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 857 - 900
Target Start/End: Complemental strand, 24864555 - 24864512
Alignment:
Q  857 caagaagaaagtgttcaaaatgattttctatttcatactatgat 900  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||    
T  24864555 caagaagaaagtgctcaaaaggattttctatttcttactatgat 24864512  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 808 - 854
Target Start/End: Complemental strand, 24864685 - 24864640
Alignment:
Q  808 ttggccaccgacgaaaagtatcaatgtgcatcaaggttctaccatta 854  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||    
T  24864685 ttggccaccgacgaaa-gtaacaatttgcatcaaggttctaccatta 24864640  T

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Target: chr4 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 512 - 673
Target Start/End: Complemental strand, 50379561 - 50379400
Alignment:
Q  512 aatctgcttattttgttctaaataatatttcagaaacacaataactgagagcaatatatagataccagagggattatagtttcttaaggaatggcctgaa 611  Q
    ||||| |||||||| |||||| |||||||||| ||||| | ||| |||||||  |||||| | |  ||||| ||||  || |||| |||||||| |||||    
T  50379561 aatcttcttattttattctaactaatatttcaaaaacaaagtaattgagagcggtatataaacatgagaggtattagggtatcttgaggaatggtctgaa 50379462  T
Q  612 acaaagtaataacaaaaatatgaagaaatacataatatcaacggagcatcacaacaatgttt 673  Q
    |||  |  |||||||||||| ||||||||    ||||||||||||||||| |||||||||||    
T  50379461 acagtgagataacaaaaataggaagaaatcgggaatatcaacggagcatcgcaacaatgttt 50379400  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 9813631 - 9813743
Alignment:
Q  35 catgtgatttgagtccttattcgataattgtcccaaagggtgaaaggaaacgacgaagaggaaaggaagatggttacatattagaaaatatggttttaag 134  Q
    ||||| |||||||||||  ||  ||||||||  |||| ||||||||||||| |   |||| ||||||||  |||||||||| |  ||||||||||| |||    
T  9813631 catgtcatttgagtcctagttacataattgttgcaaacggtgaaaggaaacaa---agagaaaaggaaggcggttacatatcaataaatatggtttgaag 9813727  T
Q  135 atgtttgaagttttca 150  Q
    ||| ||||||||||||    
T  9813728 atgcttgaagttttca 9813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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