View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0622_high_5 (Length: 910)

Name: NF0622_high_5
Description: NF0622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0622_high_5
NF0622_high_5
[»] chr1 (49 HSPs)
chr1 (629-808)||(15375024-15375206)
chr1 (335-509)||(15374746-15374919)
chr1 (17-103)||(11437215-11437301)
chr1 (17-103)||(24422799-24422885)
chr1 (17-103)||(11436041-11436127)
chr1 (17-103)||(52274967-52275053)
chr1 (17-102)||(51684366-51684451)
chr1 (242-305)||(15373868-15373931)
chr1 (17-99)||(24426091-24426173)
chr1 (17-103)||(35067018-35067104)
chr1 (17-102)||(39699783-39699867)
chr1 (17-102)||(45148581-45148665)
chr1 (24-103)||(23980489-23980568)
chr1 (20-99)||(37526896-37526975)
chr1 (25-103)||(14999284-14999361)
chr1 (29-102)||(39222501-39222575)
chr1 (17-103)||(51685781-51685867)
chr1 (17-102)||(36613920-36614005)
chr1 (22-103)||(39698562-39698643)
chr1 (17-102)||(41364829-41364913)
chr1 (19-99)||(45149989-45150068)
chr1 (27-103)||(52827346-52827422)
chr1 (25-103)||(11190384-11190462)
chr1 (17-103)||(12389997-12390083)
chr1 (25-99)||(39153140-39153214)
chr1 (17-103)||(44404441-44404527)
chr1 (25-103)||(45157233-45157310)
chr1 (358-447)||(2129343-2129431)
chr1 (20-103)||(35594216-35594298)
chr1 (25-103)||(7674527-7674603)
chr1 (25-103)||(33088641-33088719)
chr1 (17-103)||(36612852-36612937)
chr1 (25-99)||(39151934-39152008)
chr1 (25-99)||(43378737-43378810)
chr1 (17-99)||(50680335-50680416)
chr1 (24-102)||(50681627-50681705)
chr1 (17-99)||(52828086-52828168)
chr1 (20-103)||(43060025-43060108)
chr1 (29-103)||(14999983-15000057)
chr1 (26-103)||(16290092-16290170)
chr1 (21-99)||(43058789-43058866)
chr1 (26-65)||(44411991-44412030)
chr1 (268-302)||(2129470-2129504)
chr1 (243-293)||(2129521-2129571)
chr1 (17-103)||(7675475-7675560)
chr1 (17-99)||(7983053-7983134)
chr1 (33-99)||(52276195-52276261)
chr1 (575-608)||(15374986-15375019)
chr1 (20-103)||(35595210-35595295)
[»] chr5 (31 HSPs)
chr5 (13-103)||(19752911-19753000)
chr5 (17-103)||(25523068-25523154)
chr5 (13-103)||(19754142-19754233)
chr5 (20-102)||(22940641-22940723)
chr5 (17-103)||(18486918-18487004)
chr5 (17-103)||(40255688-40255774)
chr5 (19-99)||(20216781-20216861)
chr5 (17-103)||(16650871-16650957)
chr5 (17-103)||(28538675-28538761)
chr5 (20-103)||(33160305-33160388)
chr5 (17-103)||(5778852-5778938)
chr5 (20-102)||(20214196-20214277)
chr5 (17-103)||(25055411-25055497)
chr5 (17-103)||(36486504-36486590)
chr5 (25-99)||(24332916-24332990)
chr5 (25-102)||(1796054-1796131)
chr5 (17-102)||(25056397-25056482)
chr5 (17-103)||(5777900-5777984)
chr5 (24-103)||(18485137-18485216)
chr5 (17-103)||(25524143-25524230)
chr5 (20-103)||(33158097-33158180)
chr5 (25-103)||(18154493-18154570)
chr5 (17-99)||(28539836-28539917)
chr5 (27-103)||(5730440-5730517)
chr5 (26-99)||(2685749-2685820)
chr5 (17-102)||(5962588-5962671)
chr5 (17-103)||(7311589-7311675)
chr5 (17-99)||(42195137-42195217)
chr5 (13-78)||(2686413-2686478)
chr5 (17-100)||(36485302-36485385)
chr5 (28-78)||(34893689-34893739)
[»] chr2 (38 HSPs)
chr2 (17-103)||(7899898-7899984)
chr2 (17-103)||(22848190-22848276)
chr2 (19-103)||(36449777-36449861)
chr2 (17-103)||(38840509-38840595)
chr2 (19-99)||(36450939-36451018)
chr2 (24-103)||(18904366-18904445)
chr2 (17-103)||(23869551-23869636)
chr2 (17-103)||(38839241-38839327)
chr2 (13-102)||(18299373-18299462)
chr2 (20-103)||(18906006-18906089)
chr2 (25-103)||(18868923-18869001)
chr2 (20-103)||(22587973-22588055)
chr2 (17-99)||(7898694-7898776)
chr2 (17-103)||(11258827-11258913)
chr2 (17-103)||(11938805-11938890)
chr2 (25-99)||(13567975-13568049)
chr2 (580-689)||(17906192-17906302)
chr2 (17-103)||(41879228-41879314)
chr2 (17-102)||(1034485-1034570)
chr2 (17-101)||(13030293-13030374)
chr2 (20-102)||(41878092-41878176)
chr2 (20-101)||(18300743-18300822)
chr2 (358-429)||(10928068-10928137)
chr2 (19-103)||(13570575-13570659)
chr2 (17-103)||(18797245-18797332)
chr2 (20-102)||(24476863-24476943)
chr2 (19-78)||(32739647-32739706)
chr2 (25-103)||(802615-802692)
chr2 (25-103)||(16446153-16446231)
chr2 (16-78)||(24475248-24475310)
chr2 (17-78)||(22587525-22587585)
chr2 (358-438)||(40140342-40140422)
chr2 (45-103)||(21837299-21837355)
chr2 (17-103)||(11257621-11257706)
chr2 (20-78)||(28617946-28618004)
chr2 (252-304)||(10928182-10928234)
chr2 (27-101)||(1033212-1033284)
chr2 (25-74)||(810805-810854)
[»] chr4 (45 HSPs)
chr4 (17-103)||(1290214-1290300)
chr4 (17-103)||(52491623-52491709)
chr4 (13-103)||(49308040-49308128)
chr4 (19-103)||(17382992-17383075)
chr4 (19-103)||(17388229-17388312)
chr4 (20-99)||(8758856-8758935)
chr4 (17-103)||(1963195-1963281)
chr4 (17-102)||(10471404-10471489)
chr4 (20-99)||(12129626-12129705)
chr4 (17-103)||(25685838-25685924)
chr4 (17-99)||(8155741-8155822)
chr4 (17-100)||(19750591-19750673)
chr4 (17-100)||(19789133-19789215)
chr4 (17-103)||(31599788-31599874)
chr4 (20-102)||(31601004-31601086)
chr4 (17-99)||(35935549-35935631)
chr4 (15-103)||(3928872-3928960)
chr4 (19-102)||(1834119-1834202)
chr4 (24-103)||(8757674-8757752)
chr4 (20-103)||(26421641-26421723)
chr4 (17-103)||(1835118-1835204)
chr4 (17-103)||(10470545-10470631)
chr4 (17-103)||(48780247-48780333)
chr4 (17-103)||(48781062-48781147)
chr4 (27-103)||(13386013-13386090)
chr4 (17-102)||(25684934-25685019)
chr4 (20-99)||(35934347-35934424)
chr4 (19-99)||(55603549-55603628)
chr4 (24-102)||(1964464-1964542)
chr4 (17-103)||(5526142-5526227)
chr4 (26-99)||(55602379-55602451)
chr4 (17-103)||(13386548-13386635)
chr4 (13-102)||(33310101-33310187)
chr4 (17-103)||(5525359-5525444)
chr4 (17-102)||(10447006-10447092)
chr4 (17-103)||(21177996-21178081)
chr4 (26-99)||(1289100-1289173)
chr4 (244-305)||(8194012-8194072)
chr4 (15-103)||(3927665-3927753)
chr4 (27-103)||(14868889-14868964)
chr4 (27-103)||(14876970-14877045)
chr4 (12-103)||(10448271-10448362)
chr4 (17-92)||(21539087-21539162)
chr4 (25-103)||(49306774-49306851)
chr4 (25-103)||(13509383-13509460)
[»] chr3 (51 HSPs)
chr3 (17-103)||(29931225-29931311)
chr3 (17-103)||(29980379-29980465)
chr3 (17-103)||(54540806-54540892)
chr3 (17-101)||(8456479-8456562)
chr3 (13-103)||(12700174-12700262)
chr3 (17-99)||(7267647-7267728)
chr3 (17-103)||(7758401-7758487)
chr3 (20-103)||(29932718-29932800)
chr3 (20-103)||(29981872-29981954)
chr3 (25-103)||(54539754-54539832)
chr3 (20-103)||(55192014-55192096)
chr3 (13-103)||(12703512-12703601)
chr3 (25-103)||(19984848-19984926)
chr3 (17-103)||(22776828-22776914)
chr3 (17-102)||(47614185-47614270)
chr3 (19-103)||(53614818-53614902)
chr3 (17-103)||(534498-534584)
chr3 (17-99)||(47610596-47610678)
chr3 (45-103)||(47615592-47615650)
chr3 (20-103)||(24516459-24516542)
chr3 (13-99)||(40426790-40426877)
chr3 (17-99)||(7268843-7268924)
chr3 (13-103)||(11671353-11671442)
chr3 (27-103)||(5001199-5001275)
chr3 (15-103)||(28262192-28262279)
chr3 (15-103)||(28263125-28263213)
chr3 (27-103)||(47609696-47609772)
chr3 (15-103)||(52276303-52276391)
chr3 (15-103)||(52281561-52281649)
chr3 (24-103)||(51038813-51038892)
chr3 (27-102)||(51469972-51470047)
chr3 (17-103)||(5029699-5029784)
chr3 (17-102)||(535798-535883)
chr3 (15-103)||(18442629-18442718)
chr3 (15-103)||(19487703-19487792)
chr3 (25-103)||(19986094-19986174)
chr3 (17-102)||(51037536-51037620)
chr3 (17-102)||(52840620-52840705)
chr3 (15-102)||(18456077-18456165)
chr3 (26-102)||(46719941-46720017)
chr3 (27-103)||(51470481-51470556)
chr3 (17-99)||(34019161-34019241)
chr3 (17-103)||(8875905-8875991)
chr3 (17-99)||(23770423-23770505)
chr3 (17-102)||(53901404-53901487)
chr3 (26-78)||(6170296-6170348)
chr3 (26-78)||(6249633-6249685)
chr3 (20-103)||(23769856-23769939)
chr3 (17-103)||(46721236-46721322)
chr3 (28-102)||(49216247-49216321)
chr3 (26-75)||(31645000-31645049)
[»] scaffold0302 (2 HSPs)
scaffold0302 (19-103)||(17469-17553)
scaffold0302 (20-102)||(18795-18877)
[»] chr8 (48 HSPs)
chr8 (17-97)||(1824094-1824174)
chr8 (17-97)||(1858539-1858619)
chr8 (13-101)||(18979132-18979220)
chr8 (17-103)||(10007779-10007865)
chr8 (17-103)||(12353377-12353461)
chr8 (17-102)||(10006344-10006429)
chr8 (17-103)||(5513981-5514066)
chr8 (17-103)||(12351920-12352006)
chr8 (17-99)||(29968353-29968434)
chr8 (20-99)||(40471166-40471244)
chr8 (17-103)||(22221380-22221466)
chr8 (17-103)||(22227722-22227808)
chr8 (20-93)||(18978029-18978101)
chr8 (17-102)||(22220388-22220473)
chr8 (15-103)||(38980058-38980146)
chr8 (15-103)||(39011155-39011243)
chr8 (15-102)||(38974795-38974882)
chr8 (15-102)||(39005893-39005980)
chr8 (17-103)||(1823551-1823637)
chr8 (17-103)||(1857996-1858082)
chr8 (17-99)||(8389705-8389787)
chr8 (17-99)||(11282011-11282093)
chr8 (17-99)||(11287779-11287861)
chr8 (22-103)||(32207346-32207425)
chr8 (17-103)||(43661839-43661925)
chr8 (20-93)||(18970920-18970992)
chr8 (22-103)||(45114537-45114618)
chr8 (15-103)||(32968455-32968543)
chr8 (17-103)||(8388463-8388547)
chr8 (17-103)||(30335638-30335724)
chr8 (580-689)||(33892692-33892802)
chr8 (575-647)||(14164355-14164427)
chr8 (709-809)||(14164474-14164574)
chr8 (12-64)||(18488273-18488325)
chr8 (15-102)||(32973950-32974037)
chr8 (20-103)||(42982676-42982759)
chr8 (17-100)||(43661267-43661350)
chr8 (17-103)||(24122882-24122967)
chr8 (44-102)||(24483143-24483201)
chr8 (25-78)||(24488703-24488756)
chr8 (53-102)||(36249552-36249601)
chr8 (26-102)||(30336526-30336602)
chr8 (36-102)||(23170034-23170098)
chr8 (246-305)||(23842731-23842790)
chr8 (25-103)||(5514294-5514371)
chr8 (20-103)||(5003116-5003198)
chr8 (17-102)||(11283225-11283310)
chr8 (46-103)||(11456637-11456694)
[»] chr7 (31 HSPs)
chr7 (17-103)||(22630468-22630554)
chr7 (17-102)||(18371424-18371509)
chr7 (20-103)||(7501871-7501954)
chr7 (17-103)||(7500454-7500539)
chr7 (17-103)||(17782569-17782655)
chr7 (17-102)||(31659622-31659708)
chr7 (27-103)||(127336-127411)
chr7 (27-103)||(3227620-3227696)
chr7 (27-103)||(31949828-31949904)
chr7 (24-103)||(11658378-11658457)
chr7 (17-99)||(42886302-42886384)
chr7 (17-74)||(18372473-18372530)
chr7 (17-97)||(14999171-14999249)
chr7 (20-103)||(21505415-21505496)
chr7 (17-103)||(22629482-22629571)
chr7 (17-103)||(31949321-31949407)
chr7 (27-100)||(17781663-17781736)
chr7 (17-102)||(47525383-47525468)
chr7 (19-99)||(11662569-11662649)
chr7 (28-103)||(34174010-34174084)
chr7 (28-95)||(47524532-47524599)
chr7 (30-103)||(20163585-20163658)
chr7 (17-99)||(128617-128699)
chr7 (27-101)||(3227109-3227182)
chr7 (21-103)||(34352806-34352888)
chr7 (25-102)||(48934927-48935004)
chr7 (245-297)||(10024277-10024329)
chr7 (23-79)||(43899469-43899525)
chr7 (20-103)||(47369780-47369863)
chr7 (259-305)||(10024334-10024380)
chr7 (46-103)||(15681594-15681651)
[»] scaffold0019 (2 HSPs)
scaffold0019 (13-101)||(61471-61559)
scaffold0019 (13-102)||(60090-60179)
[»] chr6 (33 HSPs)
chr6 (20-103)||(7316313-7316396)
chr6 (25-103)||(16704521-16704599)
chr6 (17-103)||(8659264-8659350)
chr6 (17-103)||(8821872-8821958)
chr6 (17-103)||(14822359-14822445)
chr6 (17-102)||(16703570-16703652)
chr6 (17-103)||(27437827-27437913)
chr6 (17-102)||(7314880-7314964)
chr6 (17-102)||(8822809-8822894)
chr6 (19-103)||(10784591-10784676)
chr6 (17-99)||(1829619-1829701)
chr6 (17-103)||(27322084-27322169)
chr6 (26-103)||(6842308-6842385)
chr6 (246-303)||(22536014-22536071)
chr6 (35-103)||(3721611-3721679)
chr6 (17-103)||(14823591-14823678)
chr6 (17-103)||(8660220-8660305)
chr6 (17-78)||(26575070-26575131)
chr6 (27-103)||(3722533-3722609)
chr6 (691-807)||(28299189-28299305)
chr6 (691-807)||(28512768-28512884)
chr6 (249-299)||(10041174-10041224)
chr6 (27-103)||(27318314-27318389)
chr6 (17-99)||(34834595-34834677)
chr6 (31-103)||(26574618-26574690)
chr6 (21-97)||(29473082-29473158)
chr6 (25-103)||(6840193-6840269)
chr6 (454-509)||(28299032-28299087)
chr6 (454-509)||(28512986-28513041)
chr6 (20-102)||(30495717-30495797)
chr6 (54-100)||(26717137-26717183)
chr6 (260-305)||(2961551-2961596)
chr6 (26-103)||(3333051-3333128)
[»] scaffold0320 (1 HSPs)
scaffold0320 (25-103)||(19487-19565)
[»] scaffold2034 (2 HSPs)
scaffold2034 (17-102)||(233-318)
scaffold2034 (19-79)||(996-1056)
[»] scaffold0294 (2 HSPs)
scaffold0294 (20-103)||(5457-5540)
scaffold0294 (17-103)||(4441-4527)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-103)||(49449-49535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (15-102)||(133-220)
[»] scaffold0093 (2 HSPs)
scaffold0093 (17-101)||(2481-2564)
scaffold0093 (17-101)||(7104-7187)
[»] scaffold1303 (1 HSPs)
scaffold1303 (17-103)||(1438-1524)
[»] scaffold0632 (1 HSPs)
scaffold0632 (17-103)||(3324-3409)
[»] scaffold0059 (1 HSPs)
scaffold0059 (25-101)||(4754-4829)
[»] scaffold0045 (1 HSPs)
scaffold0045 (26-102)||(49109-49185)
[»] scaffold0112 (1 HSPs)
scaffold0112 (17-102)||(37148-37232)
[»] scaffold0586 (1 HSPs)
scaffold0586 (17-99)||(6346-6428)
[»] scaffold0186 (2 HSPs)
scaffold0186 (29-102)||(23081-23152)
scaffold0186 (42-103)||(23931-23992)
[»] scaffold0642 (1 HSPs)
scaffold0642 (244-305)||(8341-8401)
[»] scaffold0345 (1 HSPs)
scaffold0345 (244-305)||(18254-18314)
[»] scaffold0105 (1 HSPs)
scaffold0105 (244-305)||(20668-20728)


Alignment Details
Target: chr1 (Bit Score: 141; Significance: 2e-73; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 629 - 808
Target Start/End: Original strand, 15375024 - 15375206
Alignment:
Q  629 cttaagaaaaataggtaaataatcccatcaacaatgtatgtaataacatgaccatgactagtct---tatcagcacaagcttcgaagcctctaatagtcc 725  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||| ||||||||||||||| |||    
T  15375024 cttaagaaaaataggtaaataatcccatcaacaatgtatgttataacatgaccatgactagtctgcttatcagcacaagcatcgaagcctctaatattcc 15375123  T
Q  726 gatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggacttgatagagttcttttttct 808  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15375124 gatagaggaccttcattgagccagaggaataattgcacccttagactgggttttgtaatggacttgatagagttcttttttct 15375206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 335 - 509
Target Start/End: Original strand, 15374746 - 15374919
Alignment:
Q  335 tgacgttagtgactttnnnnnnntgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaaca 434  Q
    ||||||||||||||||       ||||| ||||||||||   || ||||||||||||||| || ||| |||| ||||||||||||||||||||||||| |    
T  15374746 tgacgttagtgactttaaaaaaatgaacattttatgtgcgccctgattcaattccttgcataacttggtttt-cataaaaattaattaggtccgccaaaa 15374844  T
Q  435 aggggagggttatatcaactaggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 509  Q
    ||||  |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15374845 agggcggggttatatcaattaggtttacaccccgaaggtacttttgtcttctaccacctgctctgaaattttatt 15374919  T

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Target: chr1; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 11437215 - 11437301
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  11437215 tagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcct 11437301  T

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Target: chr1; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 24422885 - 24422799
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  24422885 tagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcct 24422799  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 11436127 - 11436041
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||| || |||   | ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  11436127 tagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcct 11436041  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 52275053 - 52274967
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| |||||||||||||||||||| |||||||  |||||||||||| ||||||||||||  |||| ||||||||||||||||||    
T  52275053 taggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 52274967  T

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Target: chr1; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 51684451 - 51684366
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||||||||||||||| ||  |||||| ||||||||||||  |||| |||||||| ||||||||||||||||||||||    
T  51684451 tagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

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Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 15373868 - 15373931
Alignment:
Q  242 ttatgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15373868 ttatgaaaaggaacggttatgtggtaattgaaagaaaaaataataatcaaaaggaactgttata 15373931  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 24426091 - 24426173
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  24426091 taggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

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Target: chr1; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 35067018 - 35067104
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||   |||||| ||||||| ||||  |||||||| |||| |||||||||||||||||||||||    
T  35067018 tagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcct 35067104  T

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Target: chr1; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 39699783 - 39699867
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||||||||||||| |||| |||||||  |||||||||||| | ||||||||| | ||||||||||||||||||||||    
T  39699783 tagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcactttagcc 39699867  T

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Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 45148665 - 45148581
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| |||||||||||||||| || ||||||| ||||||||||||| |||||||||||||  ||| |||||||||||||||||    
T  45148665 taggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcc 45148581  T

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Target: chr1; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 23980489 - 23980568
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| ||||||||||| ||||||  ||||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  23980489 ccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagcct 23980568  T

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Target: chr1; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 37526896 - 37526975
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||| |||| | |||||||||  ||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  37526896 ggggccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

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Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 14999361 - 14999284
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||||  |||||||||||| ||||||||||| | ||||||||||| |||||||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcct 14999284  T

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Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 39222501 - 39222575
Alignment:
Q  29 attgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgcactttagcc 102  Q
    |||||||||||| || ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  39222501 attgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 51685781 - 51685867
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||||||||||||||||  ||| || ||||||| ||||  ||||||||||||  |||||||||||||||||||||||    
T  51685781 tagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcct 51685867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 36613920 - 36614005
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||| |||| |||| |||||||  || |||||| ||||||||||||    
T  36613920 tagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 39698643 - 39698562
Alignment:
Q  22 ggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||| |||||| |||| ||||||| ||||||||| ||| |||| |||||||| ||||| |||||||||||||||||    
T  39698643 ggccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcct 39698562  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 41364913 - 41364829
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| | ||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| | ||| ||||||||||||||||||    
T  41364913 taggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcc 41364829  T

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Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 45149989 - 45150068
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||| ||||||||| ||||||||| ||| ||| ||||||||||||| ||||||||||| | |||||||||||||||||||    
T  45149989 ggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 52827422 - 52827346
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  52827422 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcct 52827346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 11190462 - 11190384
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| ||||||||||| ||||| |||||||||||||  |||| ||| |||| ||| |||||||||||||||||||    
T  11190462 caaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcct 11190384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 12389997 - 12390083
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||| || ||||||||  ||||||| |||||| ||||  ||||||||||||| | ||||||| |||||||||||||    
T  12389997 tagggggccaaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcct 12390083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 39153140 - 39153214
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||  || ||| ||||||||||||| |||||||| |||| |||| ||||||||||||||    
T  39153140 caaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 44404527 - 44404441
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||||| || ||||||||||||   ||| ||||||||| ||||||||    
T  44404527 tagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcct 44404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 45157233 - 45157310
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||  |||||| ||||||||||||| |||||||| || | ||||| |||||||||||||||||    
T  45157233 caaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcct 45157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 447
Target Start/End: Complemental strand, 2129431 - 2129343
Alignment:
Q  358 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaacaaggggagggttat 447  Q
    ||||||||| |||||||| |||||| |||| ||||||||  || |||||||||||||||||||| |||||||||| |||||  |||||||    
T  2129431 tgaacttttcatgtgctacctaatttaatttcttgcagacctt-ttttttcataaaaattaattgggtccgccaaaaagggttgggttat 2129343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 35594298 - 35594216
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| |||||||||||||||  || ||||||| | ||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  35594298 ggggtcaaaattgtagttttaatacttaggggtc-aaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 35594216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 7674603 - 7674527
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| ||| ||| ||||||||||||| |||| |||||| | |||||||||| ||||||||||||    
T  7674603 caaaattgtagtttttgtactta-gggcccaaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcct 7674527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 33088641 - 33088719
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||  ||  |||||||||||| ||||||| ||||  | |||||||||||||||||||||    
T  33088641 caaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcct 33088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 36612937 - 36612852
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||  |||||||||||||||||| ||| |   ||||||||||||  ||||||||||||| ||||||||| |||||||||||||    
T  36612937 tagggggttaaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 39152008 - 39151934
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||  |||||| |||||||| |||| |||||||| |||| |||| |||| |||||||||    
T  39152008 caaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 43378737 - 43378810
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||| | | |||||||||||||||    
T  43378737 caaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaa-gagagaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 50680416 - 50680335
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||| | |||||| |||||||| || ||||||| ||||||||||||| ||||| ||||||| ||||||||| |||||||||    
T  50680416 taggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaa-gggggaaaaatgcacttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 50681627 - 50681705
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||| |||||||||||| || |||| |  ||||||||||||| |||||||| ||||  |||||||||||||||||||||    
T  50681627 ccaatattgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 52828086 - 52828168
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| | ||||||| ||||| ||| ||||||  ||||||||||||| |||||||| |||  |||||||||||||||||||    
T  52828086 taggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T

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Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 43060025 - 43060108
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||||| ||| |||  ||||||| |||  ||||||||||||  ||||| ||||| |||||||||||    
T  43060025 ggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcct 43060108  T

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Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 14999983 - 15000057
Alignment:
Q  29 attgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||| |||||||| |||||||||||| |||| |||||||  | || ||||||| ||||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcct 15000057  T

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Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 16290170 - 16290092
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||| ||  || ||||||||||||||||  ||||||| |||| |||||| |||| |||||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcct 16290092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 43058866 - 43058789
Alignment:
Q  21 gggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||| |||||||||||||||||| |||||||  |||||||||||| |||| |||||| | |||| ||||||| ||||||    
T  43058866 gggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtacttta 43058789  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 44411991 - 44412030
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaag 65  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  44411991 aaaattgtagtttttgtacttaggggactaaaattgcaag 44412030  T

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Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 2129504 - 2129470
Alignment:
Q  268 attgaaagaaaaaataataatcaaaaggaactgct 302  Q
    ||||||||||||||||||||| |||||||||||||    
T  2129504 attgaaagaaaaaataataatgaaaaggaactgct 2129470  T

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Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 2129571 - 2129521
Alignment:
Q  243 tatgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaa 293  Q
    ||||||||| ||| | |||||| ||||||||||||||||||||||| ||||    
T  2129571 tatgaaaagaaactgatatgtgataattgaaagaaaaaataataataaaaa 2129521  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 7675475 - 7675560
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||| || ||||| || ||||| |  |||||||||||| ||||||||||||| || || ||||| |||||||||||    
T  7675475 tagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagtacactttagcct 7675560  T

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Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 7983134 - 7983053
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| ||||||||| |||||  ||  |||||| ||||||||||||| | ||||||||| | ||| |||||||||||||||    
T  7983134 taggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcacttta 7983053  T

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Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 52276195 - 52276261
Alignment:
Q  33 tagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||||||| ||||||| |||||||| |||  ||||||||||||   |||| |||||||||||||    
T  52276195 tagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcacttta 52276261  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 608
Target Start/End: Original strand, 15374986 - 15375019
Alignment:
Q  575 gaacgaagggaatctaaaattcggaaggctatgt 608  Q
    |||||||||||||||||||||| |||||||||||    
T  15374986 gaacgaagggaatctaaaattcagaaggctatgt 15375019  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 35595210 - 35595295
Alignment:
Q  20 ggggccaaaattgt-agtttttgtatttaggggaccaaaattgc-aaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||| ||||||| ||  ||||||  ||||||||| ||| |||| |||||||  ||||||||||| |||||||||||    
T  35595210 ggggccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcct 35595295  T

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Target: chr5 (Bit Score: 67; Significance: 3e-29; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 19753000 - 19752911
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  19753000 atcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 19752911  T

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Target: chr5; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 25523154 - 25523068
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  25523154 tagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 25523068  T

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Target: chr5; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 19754142 - 19754233
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggg-gaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||| |||||||||||||    
T  19754142 atcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcct 19754233  T

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Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 22940641 - 22940723
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||| |||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22940641 ggggtcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

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Target: chr5; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 18486918 - 18487004
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||| |||| | || ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  18486918 tagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcct 18487004  T

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Target: chr5; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 40255688 - 40255774
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||| |||| ||| ||||  ||||||||||||||||||||||    
T  40255688 tagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcct 40255774  T

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Target: chr5; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 20216781 - 20216861
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||| |||||||| |||| |||||||||||||||||||    
T  20216781 gggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 16650871 - 16650957
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| ||||||||||||||| || |||||||  |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  16650871 tagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcct 16650957  T

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Target: chr5; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 28538761 - 28538675
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| |||||||||||||||||| ||| |||  |||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  28538761 tagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcct 28538675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 33160305 - 33160388
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| |||||||||||||| | || ||||||| | ||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  33160305 ggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcct 33160388  T

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Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 5778852 - 5778938
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||||||| | ||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  5778852 taggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 5778938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 20214277 - 20214196
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||||||||||  ||| |  | ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20214277 ggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 25055497 - 25055411
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||||||||   || |||||||  |||||||||||||||||||||||    
T  25055497 tagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcct 25055411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 36486504 - 36486590
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| |||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| |||||||||||| |||||    
T  36486504 taggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 36486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 24332990 - 24332916
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||  || ||| ||||||||||||| |||||||| |||| |||| ||||||||||||||    
T  24332990 caaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 1796131 - 1796054
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||||| ||||| | ||||| ||||||| ||||||||||||  || |||||| ||||||||||||    
T  1796131 caaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 25056397 - 25056482
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||   | |||||||||||||||||||    
T  25056397 tagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 5777984 - 5777900
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||| |||||||||||||||||    
T  5777984 taggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcct 5777900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 18485216 - 18485137
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||| |||||  || ||||||| ||||||||||||| |||| |||||||  |||| ||||||||||||||||||    
T  18485216 ccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcct 18485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 25524143 - 25524230
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 103  Q
    |||| |||||||||||||||||||||| ||||||| |||||||| |||  |||| ||| |||   |||||||||||||||||||||||    
T  25524143 taggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcct 25524230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 33158180 - 33158097
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||||| ||||||   |||||||||||| ||||||||||||  |||  |||| |||||||||||||    
T  33158180 ggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 18154570 - 18154493
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| ||||||| | ||||||| ||| ||||||||||||| |||  |||||| |||||||||||    
T  18154570 caaaattgtagtttttgtacttaggggtc-aaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagcct 18154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 28539836 - 28539917
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||| |||||||||||||||||||| |||| ||  |||||||||||| |||| |||||| | ||||||||| |||||||||    
T  28539836 taggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 5730517 - 5730440
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa-tgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| |||||   ||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcct 5730440  T

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Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 2685820 - 2685749
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||| ||||||||||||||||  ||| |||||||| |||  ||||||| |||||| ||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaatta--gggggaatagtgcatttta 2685749  T

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Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 5962588 - 5962671
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||| ||| |||||| ||||||||||| |||||||||||||||| |||  |||||||||| |  | || |||||||||||||||||    
T  5962588 taggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttgaaagtca--gtggaaaaagtgcactttagcc 5962671  T

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Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 7311675 - 7311589
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| |||||||||||||||||| || || | |||| |||||||| ||||||||||||  |||||    ||||||||||||||    
T  7311675 tagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggggggggtgcactttagcct 7311589  T

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Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 42195217 - 42195137
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||| |||||||||||| |||||||  |||||| ||||||| ||||  |||| |||||||| |||||||||||||||||||    
T  42195217 taggggaccaaaattgtagattttgtacatagggggccaaaatcgcaa-ctttttaaagttaa-gggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 2686413 - 2686478
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    |||||||||| |||||||| ||||||||||| ||| | || |||||||||||| |||| |||||||    
T  2686413 atcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagtta 2686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 36485385 - 36485302
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 100  Q
    ||||||||||||||| ||||||||||| ||| | |  |||||||| ||| |||| |||||||  || |||||| ||||||||||    
T  36485385 tagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  28 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    ||||||||||||||||  |||||  ||||||||||||| ||||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

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Target: chr2 (Bit Score: 67; Significance: 3e-29; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 7899898 - 7899984
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  7899898 tagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 7899984  T

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Target: chr2; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 22848276 - 22848190
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||    
T  22848276 tagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 22848190  T

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Target: chr2; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 36449861 - 36449777
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36449861 ggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 36449777  T

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Target: chr2; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 38840509 - 38840595
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  38840509 tagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 38840595  T

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Target: chr2; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 36450939 - 36451018
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  36450939 gggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttta 36451018  T

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Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 18904445 - 18904366
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  18904445 ccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagcct 18904366  T

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Target: chr2; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 23869551 - 23869636
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||| ||||| |||||||| || ||||||||||||||||||||    
T  23869551 tagggagctaaaattgtagtttttgtatttagggggccaaaattgcaa-gtttttaaagttaagggtggaaaagtgcactttagcct 23869636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 38839327 - 38839241
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||| |||| |||| |||| |||||||||||||    
T  38839327 tagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcct 38839241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 18299462 - 18299373
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||||||||||||||||||| || ||||| | ||||||||| ||| ||||||||||||  || |||||||||||||||||||    
T  18299462 atcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcactttagcc 18299373  T

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Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 18906006 - 18906089
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  18906006 ggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcct 18906089  T

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Target: chr2; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 18869001 - 18868923
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||  || |||||||| |||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcct 18868923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 22587973 - 22588055
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||   |||||||| |||||||||||||    
T  22587973 ggggccaaaattgtagtttttgtacatagggg-ccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcct 22588055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 7898776 - 7898694
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||||| | || ||||| | | ||||||||||| ||||||||||||| ||| |||||||||||||||    
T  7898776 tagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 11258827 - 11258913
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  | ||| ||| |||||||||||||    
T  11258827 taggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcactttagcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 11938805 - 11938890
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||| || |||||||| ||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  11938805 taggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 11938890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 13568049 - 13567975
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||   |||||||||| |||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 580 - 689
Target Start/End: Original strand, 17906192 - 17906302
Alignment:
Q  580 aagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaataatcccatca-acaatgtatgtaataacatg 678  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||  || |||| |||| || |||||||||||| || ||||  | ||||||||||||    
T  17906192 aagggaatctaaaattcggaagaccatgtttgtccctgtaaaaatcatgcctaagtaaaacagataaataatcccaccagacaacatttgtaataacatg 17906291  T
Q  679 accatgactag 689  Q
    |||||||||||    
T  17906292 accatgactag 17906302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 41879228 - 41879314
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||  ||||||||||||| |||| ||||||| ||||||||||||| |||||||| |||| |||| ||||||| ||||||||||    
T  41879228 tagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcct 41879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 1034485 - 1034570
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| | ||||||| ||||| |||  |||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  1034485 taggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 13030374 - 13030293
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    |||||||| ||||||||| |||||||| ||||||| |||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  13030374 tagggggcaaaaattgtaatttttgtacttagggg-ccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 41878176 - 41878092
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgca---aggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||   || ||||||||||||| ||||| ||||||||||||||||    
T  41878176 ggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaa-ggggggaaagtgcactttagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 18300743 - 18300822
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    |||| ||||||||||||||||||| |||||||  |||||||||||| || |||||||||  |||||||||||||| ||||||    
T  18300743 ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaatttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 358 - 429
Target Start/End: Complemental strand, 10928137 - 10928068
Alignment:
Q  358 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgc 429  Q
    ||||||||| |||||||| || |||||||| |||||||| |||  |||||||||||||||||||||||||||    
T  10928137 tgaacttttcatgtgctacctgattcaatttcttgcagacttt--tttttcataaaaattaattaggtccgc 10928068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 13570575 - 13570659
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| |||||||| ||||||||||| ||| ||||| ||||||||||| ||||||||||||  ||  ||||| |||||||||||||    
T  13570575 ggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcct 13570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 18797332 - 18797245
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggg-ggaaaagtgcactttagcct 103  Q
    ||||||| |||||||||||||||  || ||| |||  |||||||||||| ||||||||||||  ||| ||||||||||||||||||||    
T  18797332 tagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcct 18797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 24476863 - 24476943
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||| |||| ||||||   |||| ||||||||||| |||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcactctagcc 24476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 32739706 - 32739647
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    |||||||||||||||||||||||||  || ||| ||||||||||||| ||||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

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Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 802615 - 802692
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||   ||||| ||||||||||||| |||||||| || | ||||||||||| |||||||||||    
T  802615 caaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcct 802692  T

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Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 16446231 - 16446153
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||| | |   ||||||||||| ||||||||||||| ||  ||||| |||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcct 16446153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 24475310 - 24475248
Alignment:
Q  16 atagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    ||||||||||||||||||||||||| || ||||||| | |||||| |||| ||||||||||||    
T  24475310 atagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

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Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 22587585 - 22587525
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||||||||    
T  22587585 tagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

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Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 40140342 - 40140422
Alignment:
Q  358 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaacaaggg 438  Q
    ||||||||| ||||| || || ||||||||||||||  | ||| ||||||||||||||||||||||| || |||| |||||    
T  40140342 tgaacttttcatgtgttacctgattcaattccttgcgaacttttttttttcataaaaattaattaggcccaccaaaaaggg 40140422  T

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Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 21837299 - 21837355
Alignment:
Q  45 ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||||||||| ||||||||||||  |||| ||||||||||||||||||    
T  21837299 ttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcct 21837355  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 11257706 - 11257621
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||||| || ||||||    ||||||||||| ||||||||||||  || | ||||||||||||||||||    
T  11257706 taggaggccaaaattgtagtttttatacttagggttt-aaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcct 11257621  T

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Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 28618004 - 28617946
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    |||| |||||||| |||||||||| || |||| ||||||||||||| ||||||||||||    
T  28618004 gggggcaaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

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Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 10928234 - 10928182
Alignment:
Q  252 gaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctat 304  Q
    |||||| |||||| ||| |||||||||| |||||||| |||||||||||||||    
T  10928234 gaacagttatgtgataactgaaagaaaatataataatgaaaaggaactgctat 10928182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 1033284 - 1033212
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    ||||| || |||| ||||||||||| ||||||||||||| |||| |||||| | ||||||||||| |||||||||    
T  1033284 aaattataattttggtatttagggg-ccaaaattgcaagtttttaaaagtt-aggggggaaaagtacactttagc 1033212  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 810805 - 810854
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 74  Q
    |||||||||||||||||||   ||||| ||||||||||||| ||||||||    
T  810805 caaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaa 810854  T

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Target: chr4 (Bit Score: 63; Significance: 7e-27; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 1290214 - 1290300
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| |||||||||||||||||| |||| || ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  1290214 tagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcct 1290300  T

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Target: chr4; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 52491623 - 52491709
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  52491623 tagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcct 52491709  T

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Target: chr4; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 49308040 - 49308128
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  49308040 atcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 49308128  T

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Target: chr4; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 17383075 - 17382992
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||    
T  17383075 gggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcct 17382992  T

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Target: chr4; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 17388229 - 17388312
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  17388229 gggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 17388312  T

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Target: chr4; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 8758856 - 8758935
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  8758856 ggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

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Target: chr4; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 1963281 - 1963195
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| ||||||||||||||||||  |||| | ||||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  1963281 tagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcct 1963195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 10471404 - 10471489
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  10471404 taggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 12129705 - 12129626
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||  ||||||||||||||||||    
T  12129705 ggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 25685838 - 25685924
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  25685838 tagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 25685924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 8155822 - 8155741
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttagggga-ccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||||||||||||||||||||| | |||||||| | ||||||||||| ||||||||||||  |||||||||||||||||||    
T  8155822 tagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 19750591 - 19750673
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 100  Q
    |||||||  |||||||||||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||||    
T  19750591 taggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 19789215 - 19789133
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 100  Q
    |||||||  |||||||||||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||||    
T  19789215 taggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 31599874 - 31599788
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| |||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| |||||||||||| |||||    
T  31599874 taggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 31599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 31601004 - 31601086
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||| ||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| |||||||||||||||||    
T  31601004 ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 35935549 - 35935631
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||||| |||| ||||||| | ||||||||||  |||| |||||||| ||||| |||||||||||||    
T  35935549 tagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 3928872 - 3928960
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| ||||||||||||| |||||  ||  |||||| ||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  3928872 catagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 3928960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 1834202 - 1834119
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||||||||||||| ||  ||||||  |||||||| ||| |||| |||||||  ||||||||||||||||||||||    
T  1834202 gggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 8757752 - 8757674
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||| |||| ||||||| | ||||||| ||| ||||||||||||| |||| ||||||||||||||||||    
T  8757752 ccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaa-ggggaaaaagtgcactttagcct 8757674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 26421641 - 26421723
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||||| ||||| |  |||||||||||| ||||||||||| |  ||||||||||||||||||||||    
T  26421641 ggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcct 26421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 1835118 - 1835204
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  |  ||||||||||||||||||||    
T  1835118 tagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagcct 1835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 10470631 - 10470545
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | |||||||  |||| ||| |||| ||  |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  10470631 taggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 10470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 48780333 - 48780247
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  48780333 taggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagcct 48780247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 48781062 - 48781147
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| |||||| |||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  48781062 taggggggctaaattgtggttttagtacttaggg-accaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcct 48781147  T

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Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 13386090 - 13386013
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggtttt-gaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| |||| ||||||||  |||||||||||||||||||||||    
T  13386090 aaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagcct 13386013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 25685019 - 25684934
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| | ||||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  25685019 taggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

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Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 35934424 - 35934347
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||| || ||| | || |||||||||||||||| |||| ||||||||||||  |||||||||||||||||||    
T  35934424 ggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 35934347  T

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Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 55603549 - 55603628
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||| ||||||||||||   ||||||  ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaa-ggggaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 1964464 - 1964542
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||||||||||   |||||| ||||||||| ||  |||| |||||||| || |||||||||||||||||||    
T  1964464 ccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 5526142 - 5526227
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| |||||  || ||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||    
T  5526142 taggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcct 5526227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 55602451 - 55602379
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||||||||||| ||| ||| |||| ||||||||||| |||||||||||||  |||||||| |||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaa-aggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 13386548 - 13386635
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||| |||  |||||||||||| ||||||||||||  ||||| ||||||||||||||||||    
T  13386548 taggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcct 13386635  T

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Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 33310101 - 33310187
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| ||||||||||| ||||||||||||||||||  | |||||| |||| |||| |||||||   ||  |||||||||||||||||    
T  33310101 atcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta---ggaaaaaagtgcactttagcc 33310187  T

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Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 5525444 - 5525359
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||| | ||||||||| || ||||||||||    
T  5525444 taggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcct 5525359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 10447092 - 10447006
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaat-gggggaaaagtgcactttagcc 102  Q
    |||||||  |||||||| |||||||||  |||||| | ||||||||||  |||||||| ||||  ||||||||||||||||||||||    
T  10447092 taggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

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Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 21178081 - 21177996
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||||||||||||||   ||||||| |||||||||||  || |||||||| | ||||| ||||| |||||||||||    
T  21178081 tagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagtt-agggggggaaagtacactttagcct 21177996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 1289173 - 1289100
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||||||||||| || |||| ||| ||||||| |||   |||||||||||| ||||||||||| |||||||    
T  1289173 aaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 8194012 - 8194072
Alignment:
Q  244 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    ||||||| |||| | |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  8194012 atgaaaaagaaccgttatgtggtaattaaaagaaaa-ataataatgaaaaggaactgctata 8194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 3927753 - 3927665
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| || ||||||||||||||||  ||  | |||| ||||||| ||||  |||| |||||||  |||||||||||||||||||||||    
T  3927753 catagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcct 3927665  T

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Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 14868964 - 14868889
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||  || |||| || ||||||||||||| ||||||||| ||  |||||||||||||||||||||||    
T  14868964 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 14868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 14876970 - 14877045
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||  || |||| || ||||||||||||| ||||||||| ||  |||||||||||||||||||||||    
T  14876970 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 14877045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 10448271 - 10448362
Alignment:
Q  12 tatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||| |||||||||||||||||||||||  |||||| | ||||| ||||  |||||||| |||  || ||  ||||||||||||||||    
T  10448271 tatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcct 10448362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 21539087 - 21539162
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtg 92  Q
    ||||||| ||||||||||||||||  | ||||| | ||||||||||||| |||| ||| |||| || |||||||||    
T  21539087 tagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 49306851 - 49306774
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg--aaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||   | ||||||||||||| ||||||||||   ||||||  ||||||||||||||||||    
T  49306851 caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagt---tgggggaaaaaagtgcactttagcct 49306774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 13509383 - 13509460
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||  || || |||| ||||||||||||  |||| |||||| | ||||||||||| |||||||||||    
T  13509383 caaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacactttagcct 13509460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 7e-27; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 29931311 - 29931225
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  29931311 tagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 29931225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 29980465 - 29980379
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  29980465 tagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 29980379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 54540806 - 54540892
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  54540806 tagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 54540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 8456562 - 8456479
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | |||| ||||||||||||||||    
T  8456562 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 12700262 - 12700174
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||| |||||||||||||||||    
T  12700262 atcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcct 12700174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 7267728 - 7267647
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  7267728 tagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 7758487 - 7758401
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| |||||||||||||||||| |||||||  |||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  7758487 tagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcct 7758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 29932718 - 29932800
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  29932718 ggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 29981872 - 29981954
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  29981872 ggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29981954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 54539832 - 54539754
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||||||   ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  54539832 caaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcct 54539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 55192014 - 55192096
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||| ||||||||| | |||||||||||    
T  55192014 ggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagcct 55192096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 12703512 - 12703601
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| |||  ||||||||||| |  ||| ||||||||||||||||||    
T  12703512 atcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcactttagcct 12703601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 19984926 - 19984848
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||  |||||| ||||||||||||| |||||||| |||  |||||||||||||||||||||||    
T  19984926 caaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcct 19984848  T

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Target: chr3; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 22776828 - 22776914
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||  || |||||||||  || ||||||||||||||||||||    
T  22776828 tagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcct 22776914  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 47614270 - 47614185
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||| |||||||||||||||||    
T  47614270 tagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagcc 47614185  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 53614902 - 53614818
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||| ||| ||||||||||||| || |||||| |||||||||||||    
T  53614902 gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcct 53614818  T

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Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 534584 - 534498
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||||||  |||| |  |||||||||||| |||||| |||||  |||| ||||||||||||||||||    
T  534584 tagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcct 534498  T

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Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 47610596 - 47610678
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||    
T  47610596 taggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 47615592 - 47615650
Alignment:
Q  45 ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  47615592 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 47615650  T

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Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 24516542 - 24516459
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||| |||| |||||||  |||| ||||||||||||| ||||    
T  24516542 ggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttggcct 24516459  T

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Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 40426790 - 40426877
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtat-ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||||| ||||||||| | ||||| | ||| ||||||  |||| |||||||| |||||||||||||||||||    
T  40426790 atcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

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Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 7268843 - 7268924
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||| ||||||||||||||||| | || ||||| | ||||||||||||| ||||||||||| | |||||||||||||||||||    
T  7268843 taggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 7268924  T

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Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 11671353 - 11671442
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||| ||||  |||||||||| |||||||||| | ||||||||||| ||||||||||| | | || ||||||||||||||||||    
T  11671353 atcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcactttagcct 11671442  T

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Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 5001275 - 5001199
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| ||  || ||||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcct 5001199  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 28262279 - 28262192
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  28262279 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttag-gggggaaaagtgcactttagcct 28262192  T

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Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 28263125 - 28263213
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| ||||| |||||||  |||||||||||||||||||||||    
T  28263125 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcct 28263213  T

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Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 47609772 - 47609696
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  |||||||||||||| ||||||||    
T  47609772 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcct 47609696  T

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Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 52276391 - 52276303
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||| ||  |||||||||||||||||||||||    
T  52276391 catagggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcct 52276303  T

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Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 52281561 - 52281649
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||| ||  |||||||||||||||||||||||    
T  52281561 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcct 52281649  T

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Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 51038813 - 51038892
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||   ||||||  |||||||||||  |||| |||||||| || ||||||||||||||||||||    
T  51038813 ccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcct 51038892  T

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Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 51470047 - 51469972
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| |||  | ||||||||||||||||||||    
T  51470047 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

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Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 5029699 - 5029784
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||  |||||||| ||||| ||| ||||| | ||||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  5029699 taggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 5029784  T

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Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 535798 - 535883
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||  |||||| |||||||  || ||| ||||||||||||||||| ||||||||||||  || |||||||| ||||||||||    
T  535798 tagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

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Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 18442718 - 18442629
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||||  ||  | |||| ||||||| |||| |||||||||||||   ||||| |||||||||||||||||    
T  18442718 catagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcct 18442629  T

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Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 19487792 - 19487703
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||||  ||  | |||| ||||||| |||| |||||||||||||   ||||| |||||||||||||||||    
T  19487792 catagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcct 19487703  T

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Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 19986094 - 19986174
Alignment:
Q  25 caaaattgtagtttttgtatttagg--ggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||| ||  ||||  || ||||||||||||| |||||||| ||||  ||||||||||||||||||||||    
T  19986094 caaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcct 19986174  T

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Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 51037620 - 51037536
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||| |||||||||||||||||   ||| ||  |||||||||||  ||||||||||||| ||| ||||||||||||||||||    
T  51037620 tagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcactttagcc 51037536  T

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Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 52840620 - 52840705
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| ||||||||| |||||  || ||||||  ||||||||||||| ||||||||||||  || ||||||| |||||||||||    
T  52840620 tagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagcc 52840705  T

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Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 18456077 - 18456165
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggg-gaaaagtgcactttagcc 102  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||| ||||||||||||||||||    
T  18456077 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagcc 18456165  T

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Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 46720017 - 46719941
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||| ||  |||||| ||||||| ||||  |||| |||||||| ||||||||| ||||||||||||    
T  46720017 aaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

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Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 51470481 - 51470556
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| |||||||| | |||||||||| ||||||||||| | ||||||| |||||||||||||||    
T  51470481 aaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagcct 51470556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 34019161 - 34019241
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||| ||||||||||||| ||||||  ||||||  |||||||||||| |||||||||||||  |||||||| || ||||||    
T  34019161 taggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaa--ggggaaaaatgtacttta 34019241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 8875991 - 8875905
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||||||||  || ||| | |||||||||   ||||  || |||| ||| |||||||||||||||||||    
T  8875991 tagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcct 8875905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 23770423 - 23770505
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||| ||||||||||||||||||  || ||||||||||||| ||  |||| ||| |||| ||| ||||| |||||||||    
T  23770423 tagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 53901404 - 53901487
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||| ||||||||||||||| ||| ||   |||||||||||  |||| ||| |||  ||||||||||||||||||||||    
T  53901404 tagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagcc 53901487  T

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Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 6170348 - 6170296
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    ||||||||| |||||||| ||| |||| |||||||||||| ||||||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagtta 6170296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 6249685 - 6249633
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    |||||||||||||||||| ||| ||||  ||||||||||| ||||||||||||    
T  6249685 aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 23769939 - 23769856
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||| |  ||| |||  ||||||||||  | ||||||||||| || |||||||||||||| |||||    
T  23769939 ggggtcaaaattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcacttcagcct 23769856  T

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Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 46721236 - 46721322
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| | ||||||||||||||||||  ||||||   ||||| ||||  |||| |||||||  ||| |||||||||||||||||||    
T  46721236 taggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 49216321 - 49216247
Alignment:
Q  28 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||  ||||||  |||||||||||  |||||||| |||   | |||||||||||||||||||    
T  49216321 aattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 31645049 - 31645000
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaag 75  Q
    |||||||||||||||| | ||||||| ||||||||| ||| |||||||||    
T  31645049 aaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 17553 - 17469
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  17553 gggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcct 17469  T

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Target: scaffold0302; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 18795 - 18877
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||| |||||||||||  |||||||||||||||||||  |||| |||||||   ||| |||||||||||||||||    
T  18795 ggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcc 18877  T

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Target: chr8 (Bit Score: 61; Significance: 1e-25; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 1824094 - 1824174
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 97  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  1824094 tagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

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Target: chr8; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 1858539 - 1858619
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 97  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  1858539 tagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

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Target: chr8; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 18979132 - 18979220
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  18979132 atcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

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Target: chr8; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 10007779 - 10007865
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| |||||||||| |||| | || ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  10007779 taggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 10007865  T

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Target: chr8; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 12353377 - 12353461
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  12353377 tagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcct 12353461  T

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Target: chr8; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 10006429 - 10006344
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  10006429 tagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 10006344  T

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Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 5514066 - 5513981
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||| ||||||||||||||||||    
T  5514066 taggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcactttagcct 5513981  T

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Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 12352006 - 12351920
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||||||||||||||| |||||||  |||||||||||  ||||||||||||| ||||| ||| |||||||||||||    
T  12352006 tagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcct 12351920  T

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Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 29968353 - 29968434
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||| ||| |||||||||||||||| ||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||    
T  29968353 taggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 40471166 - 40471244
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||| |||||||||||||||||||||| || |||||||||| ||| |||| |||||||| |||||||||||||||||||    
T  40471166 ggggctaaaattgtagtttttgtatttatgg-accaaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

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Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 22221380 - 22221466
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  22221380 tagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 22227722 - 22227808
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  22227722 tagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22227808  T

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Target: chr8; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 18978101 - 18978029
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 93  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||||||||||||    
T  18978101 ggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 22220473 - 22220388
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||||||||||||||| ||  ||||||  ||||||||||||  ||| |||||||  ||||||||||||||||||||||    
T  22220473 tagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 38980058 - 38980146
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  38980058 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 38980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 39011155 - 39011243
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  39011155 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 39011243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 38974882 - 38974795
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  38974882 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 39005980 - 39005893
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  39005980 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39005893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 1823637 - 1823551
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| || ||||||||||||||||| |||| ||  |||||||||||| |||| |||||||| |||| |||||| |||||||||||    
T  1823637 taggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 1858082 - 1857996
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| || ||||||||||||||||| |||| ||  |||||||||||| |||| |||||||| |||| |||||| |||||||||||    
T  1858082 taggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 8389705 - 8389787
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||| | ||||||||||||||||||  || ||||||||||||||||  |||||||| ||||  ||||||||||||||||||    
T  8389705 taggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 11282093 - 11282011
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| |||||||||  ||||||||| |||||| ||||||||||||  |||| |||||||| |||| ||||||||||||||    
T  11282093 tagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 11287861 - 11287779
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||| |||| |||||||  || | ||||||||||||||    
T  11287861 tagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 32207346 - 32207425
Alignment:
Q  22 ggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||| ||||||   |||||||||||| ||||||| ||||  ||||| |||||||||||||||||    
T  32207346 ggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcactttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 43661839 - 43661925
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||| |||||||||||  ||| |||  ||||||||||  ||||||||||||| || |||||||||||||| |||||    
T  43661839 tagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 18970992 - 18970920
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 93  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||||||||||||    
T  18970992 ggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 45114537 - 45114618
Alignment:
Q  22 ggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||| ||||  ||| | |||||||||||||| ||||||||||||  || |||||||||||||| |||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 32968543 - 32968455
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| ||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  32968543 catagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 32968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 8388547 - 8388463
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||| |||||||||||  |||||| | ||||||||||  |||| |||||||  ||||| |||||||||||||||||    
T  8388547 tagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcactttagcct 8388463  T

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Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 30335724 - 30335638
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||  ||||||||| |||||||| |||| |  ||||||||||||| |||| |||||||| || |||||| |||||||||||||    
T  30335724 tagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcct 30335638  T

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Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 689
Target Start/End: Original strand, 33892692 - 33892802
Alignment:
Q  580 aagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaataatcccatca-acaatgtatgtaataacatg 678  Q
    ||||||||||||||| | |||| | |||||||||| | ||||||||  || ||||||||||||||||| ||| ||| || ||||  | ||||||||||||    
T  33892692 aagggaatctaaaatacagaagaccatgtatgtccctctaaaaatcttgcctaagaaaaataggtaaagaattccaccagacaacatttgtaataacatg 33892791  T
Q  679 accatgactag 689  Q
    ||||| |||||    
T  33892792 accataactag 33892802  T

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Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 14164355 - 14164427
Alignment:
Q  575 gaacgaagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaa 647  Q
    |||| ||||||||||||||||| | || |  ||||||||||||||||||||| || ||| |||||||||||||    
T  14164355 gaactaagggaatctaaaattcagtagaccgtgtatgtccttgtaaaaatcctgcctaaaaaaaataggtaaa 14164427  T

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Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 809
Target Start/End: Original strand, 14164474 - 14164574
Alignment:
Q  709 gaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggacttgatagagttcttttttct 808  Q
    ||||| ||||||| ||| ||||| ||||||||||||   ||||||||||||||||| ||||||  | ||||||||   ||| |||| |||||||||||||    
T  14164474 gaagcatctaatattccaatagaagaccttcattgagaaagaggagtaattgcacctttagaccggattttgtaggacactcgatatagttcttttttct 14164573  T
Q  809 g 809  Q
    |    
T  14164574 g 14164574  T

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Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 18488273 - 18488325
Alignment:
Q  12 tatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaa 64  Q
    |||| ||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  18488273 tatcttagagggccaaaattgtagtttttgtatataggggactaaaattgcaa 18488325  T

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Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 32973950 - 32974037
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||| ||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||| |||||||||||||||||    
T  32973950 catagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagcc 32974037  T

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Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 42982676 - 42982759
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| |||||||||||||||||| |  ||||| |||||||| |||  |||| ||| |||| || ||||||||||||||||||||    
T  42982676 ggggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcct 42982759  T

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Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 43661350 - 43661267
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 100  Q
    ||||||||||||||| |||||||||||  || ||||||||||||| ||  |||| ||| |||| ||  ||||||||||||||||    
T  43661350 tagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

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Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 24122967 - 24122882
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| | |||||| ||||||||||| |||||||  |||||||||||  |||| |||||| | ||||||||| |||||||||||||    
T  24122967 taggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcct 24122882  T

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Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 24483201 - 24483143
Alignment:
Q  44 tttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||| ||||||||||||| |||||||| |||   |||||||||||||||||||||    
T  24483201 tttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

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Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 24488703 - 24488756
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    ||||||||| |||||  |||||||||| ||||||||||||| ||||||||||||    
T  24488703 caaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagtta 24488756  T

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Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 36249601 - 36249552
Alignment:
Q  53 ccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||  |||||||| |||| ||||||||||||||||||||||    
T  36249601 ccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

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Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 30336526 - 30336602
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||||||||||||| ||||| | | ||||||  ||| ||||||||||||  |||| | |||||||||||||||    
T  30336526 aaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

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Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 23170034 - 23170098
Alignment:
Q  36 tttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||| |||||||| |||||||||||| |||||||| |||  ||||| ||| ||||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaatta--ggggggaaaatgcactttagcc 23170098  T

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Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 23842790 - 23842731
Alignment:
Q  246 gaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    |||||||||| | |||||||||||| |||||||| || ||||| ||||||||||| ||||    
T  23842790 gaaaaggaaccgttatgtggtaattaaaagaaaatatcataataaaaaggaactgatata 23842731  T

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Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 5514294 - 5514371
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||  | | ||||||||||| |||| ||| || | |||  ||||||||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaagtgcactttagcct 5514371  T

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Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 5003116 - 5003198
Alignment:
Q  20 ggggccaaaattgtagttttt-gtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||| |||||| ||| |||||||   ||||||||||| ||||||||||||  ||||| ||||||| |||||||||    
T  5003116 ggggacaaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagtta--ggggggaaagtgcgctttagcct 5003198  T

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Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11283225 - 11283310
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||| ||||||||||  ||||| ||  |||||| | |||||| |||  ||||||||||||| ||||| ||| ||||||||||||    
T  11283225 taggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

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Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 11456694 - 11456637
Alignment:
Q  46 taggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| ||||||||||||  |||||||| |||  ||| |||||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcct 11456637  T

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Target: chr7 (Bit Score: 59; Significance: 2e-24; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 22630468 - 22630554
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  22630468 tagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcct 22630554  T

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Target: chr7; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 18371509 - 18371424
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  18371509 tagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 7501871 - 7501954
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  7501871 ggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 7501954  T

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Target: chr7; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 7500539 - 7500454
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||| |||| | || |||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  7500539 tagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcct 7500454  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 17782569 - 17782655
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  17782569 taggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 17782655  T

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Target: chr7; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 31659708 - 31659622
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgcactttagcc 102  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| ||| ||||||||||||  ||||| |||||||||||||||||    
T  31659708 tagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcc 31659622  T

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Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 127411 - 127336
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  127411 aaattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 127336  T

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Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 3227620 - 3227696
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  3227620 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcct 3227696  T

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Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 31949828 - 31949904
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||||||||||| ||||||||||||| ||||||||||||  ||||||| |||||||||||||||    
T  31949828 aaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagcct 31949904  T

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Target: chr7; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 11658457 - 11658378
Alignment:
Q  24 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||  |||||| | ||||||||| | ||||||||||||| |||||||||||||| ||||||||    
T  11658457 ccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcct 11658378  T

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Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 42886302 - 42886384
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||  ||||||||||||   || |||||||||||||||    
T  42886302 tagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

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Target: chr7; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 18372473 - 18372530
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 74  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  18372473 tagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaa 18372530  T

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Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 14999171 - 14999249
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 97  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||| || | |||||||||||||||||    
T  14999171 tagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaa-gttttgaaaatt-aggggggaaaagtgcactt 14999249  T

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Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 21505496 - 21505415
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| |||||||||||||||||||| | |||| ||||||| ||||  ||||||||||||  |||||||||||||||||||||||    
T  21505496 ggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcactttagcct 21505415  T

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Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 22629571 - 22629482
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa---tgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||||| ||||    ||||||||| |||||||||||||    
T  22629571 tagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagcct 22629482  T

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Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 31949407 - 31949321
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| |||  | |||||||||||||||||||||    
T  31949407 taggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcct 31949321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 17781736 - 17781663
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 100  Q
    ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||||||||||||||||||    
T  17781736 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

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Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 47525383 - 47525468
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| | ||||||| |||||  || ||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  47525383 taggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

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Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 11662569 - 11662649
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||||||||| |||||||||||  ||| |  | ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  11662569 gggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

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Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 34174010 - 34174084
Alignment:
Q  28 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| ||||| ||| ||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 34174084  T

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Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  28 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 95  Q
    |||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 20163585 - 20163658
Alignment:
Q  30 ttgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||  |||||  ||||||||||||| ||||||||||||  || ||| ||||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

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Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 128617 - 128699
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| | ||||||| ||||| ||| |||||||  |||||||||||  ||||||||||||  | |||||||||||||||||    
T  128617 taggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 3227182 - 3227109
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| || | ||||| |||||||||||||||    
T  3227182 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 34352806 - 34352888
Alignment:
Q  21 gggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||| |||||| |||| ||| ||||||||||| | ||| |||||||| |||  || | ||||||||||||||||||    
T  34352806 gggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcct 34352888  T

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Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 48934927 - 48935004
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| ||||||||||| |||| ||  ||||||| |||| ||||||||||||  || |||||| ||||||||||||    
T  48934927 caaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 10024277 - 10024329
Alignment:
Q  245 tgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaa 297  Q
    ||||||||||| ||||||| ||||  |||||||||||||||||| ||||||||    
T  10024277 tgaaaaggaactgctatgtcgtaaccgaaagaaaaaataataataaaaaggaa 10024329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 43899525 - 43899469
Alignment:
Q  23 gccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 79  Q
    |||||||||||| ||||| |||||||  || |||||||||||| |||||||||||||    
T  43899525 gccaaaattgtaatttttatatttagaagatcaaaattgcaagtttttgaaagttaa 43899469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 47369863 - 47369780
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||| ||||||||||| ||| | | | ||||||||||| ||||||||||||  ||   ||||||||| ||||||||    
T  47369863 ggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagcct 47369780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 10024334 - 10024380
Alignment:
Q  259 tatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    |||||| |||||||||||| |||||||||| |||| |||||||||||    
T  10024334 tatgtgataattgaaagaataaataataatgaaaatgaactgctata 10024380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 15681651 - 15681594
Alignment:
Q  46 taggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||| ||||  |||| ||| |||||||| ||||||| |||||||||||    
T  15681651 taggggaccaaaatcgcaactttttaaaacttaatgggtgaaaagttcactttagcct 15681594  T

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Target: scaffold0019 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 61471 - 61559
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    ||||||||||||||||||| ||||||||||| ||||||| | ||||||||||| |||||||| |||| || ||||||||||||||||||    
T  61471 atcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

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Target: scaffold0019; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 60179 - 60090
Alignment:
Q  13 atcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||| |||||||||||||||| ||  ||||||  |||||||||||| |||| |||||||  || |||||||||||||||||||    
T  60179 atcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagcc 60090  T

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Target: chr6 (Bit Score: 56; Significance: 1e-22; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 7316313 - 7316396
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||| ||||   |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  7316313 ggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 7316396  T

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Target: chr6; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 16704521 - 16704599
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||| |||||||  |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  16704521 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcct 16704599  T

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Target: chr6; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 8659350 - 8659264
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  8659350 taggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 8659264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 8821958 - 8821872
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  8821958 taggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 8821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 14822445 - 14822359
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||| | || ||| ||| ||||||||||||| |||||||| |||| ||| |||||||||||| ||||||    
T  14822445 tagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcct 14822359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 16703652 - 16703570
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||||| ||||||||||||||||||||||  ||| |||||||||||| ||||||||| ||  ||||||||||||||||||||||    
T  16703652 tagggggctaaaattgtagtttttgtattta-tggatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagcc 16703570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 27437913 - 27437827
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||||||||||||| | | |||||| ||||||||||||  |||| |||||||| ||| |||||||||||||||||||    
T  27437913 tagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcct 27437827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 7314964 - 7314880
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| ||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  7314964 tagggggtcaaaattgttgttttgatacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 8822809 - 8822894
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  8822809 taggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 10784676 - 10784591
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgg-gggaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||| || |||||||   ||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  10784676 gggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagcct 10784591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 1829619 - 1829701
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    |||||||||||||||||||||||| || |||||||  |||||||||||| |||| |||||||  |||  ||||||||||||||    
T  1829619 tagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 27322084 - 27322169
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||  |||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  27322084 tagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 27322169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 6842308 - 6842385
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||| |  |||||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcct 6842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 22536071 - 22536014
Alignment:
Q  246 gaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgcta 303  Q
    |||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  22536071 gaaaaggaagtgctatgtggtaactgaaagaaaaaataataatgaaaaggaactgcta 22536014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 3721679 - 3721611
Alignment:
Q  35 gtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||| ||| |||||||  |||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  3721679 gttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 3721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 14823591 - 14823678
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggg-gaaaagtgcactttagcct 103  Q
    |||||||||||||||||||||| |||| ||| ||| | ||||||||||| |||| ||| |||| ||||  ||||||||||||||||||    
T  14823591 tagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcct 14823678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 8660220 - 8660305
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| | ||||||| ||||| ||| ||||||| | ||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  8660220 taggggggctaaattgtggttttggtacttaggggtc-aaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcct 8660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 26575070 - 26575131
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 78  Q
    ||||||||||||||||||||||||||| ||| |||   ||||||||||| ||||||||||||    
T  26575070 tagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 3722533 - 3722609
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcct 3722609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 807
Target Start/End: Original strand, 28299189 - 28299305
Alignment:
Q  691 cttatcagcacaagcttcgaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggactt 790  Q
    |||| ||| |||||| || |||||||||| | ||| ||||| ||||||||||||    ||||||||||| ||||||||||  ||||||| |||   |||     
T  28299189 cttaacagtacaagcatcaaagcctctaaaattccaatagaagaccttcattgagtaggaggagtaattacacccttagatcaggttttttaggaaactc 28299288  T
Q  791 gatagagttcttttttc 807  Q
    |||||||||||||||||    
T  28299289 gatagagttcttttttc 28299305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 807
Target Start/End: Complemental strand, 28512884 - 28512768
Alignment:
Q  691 cttatcagcacaagcttcgaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggactt 790  Q
    |||| ||| |||||| || |||||||||| | ||| ||||| ||||||||||||    ||||||||||| ||||||||||  ||||||| |||   |||     
T  28512884 cttaacagtacaagcatcaaagcctctaaaattccaatagaagaccttcattgagtaggaggagtaattacacccttagatcaggttttttaggaaactc 28512785  T
Q  791 gatagagttcttttttc 807  Q
    |||||||||||||||||    
T  28512784 gatagagttcttttttc 28512768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 10041174 - 10041224
Alignment:
Q  249 aaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaact 299  Q
    ||||||| | |||||||| ||||||||||||||||||||| ||||||||||    
T  10041174 aaggaactgttatgtggttattgaaagaaaaaataataatgaaaaggaact 10041224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 27318389 - 27318314
Alignment:
Q  27 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaa-gtgcactttagcct 103  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--gggggaaaaggtgcactttagcct 27318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 34834595 - 34834677
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| | ||||||| |||||  || ||||| || |||||||||||| ||||||||||||  | |||||||||||||||||    
T  34834595 taggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 26574690 - 26574618
Alignment:
Q  31 tgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||| |||| ||  |||||||||||| ||||||||||||  || || ||| |||||||||||||    
T  26574690 tgtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcactttagcct 26574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 29473158 - 29473082
Alignment:
Q  21 gggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 97  Q
    |||||||||||||  |||||||   ||||| |||||||||||||  |||| ||| |||| |||||||||||||||||    
T  29473158 gggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 6840269 - 6840193
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||  |||||||| ||||  |||| ||||||||||| |||||    
T  6840269 caaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaa--gggggaaagtgcacttcagcct 6840193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 28299032 - 28299087
Alignment:
Q  454 taggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 509  Q
    |||||| ||||||||||| |||||   || ||||||||||||||||||||||||||    
T  28299032 taggttgacaccccgaagttgctcccatcatctaccacctgctctgaaattttatt 28299087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 509
Target Start/End: Complemental strand, 28513041 - 28512986
Alignment:
Q  454 taggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 509  Q
    |||||| ||||||||||| |||||   || ||||||||||||||||||||||||||    
T  28513041 taggttgacaccccgaagttgctcccatcatctaccacctgctctgaaattttatt 28512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 30495717 - 30495797
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||  ||||||||  |||||||  ||||| ||||  ||||||||||||  |||| |||||||||||||||||    
T  30495717 ggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtta--ggggaaaaagtgcactttagcc 30495797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 26717137 - 26717183
Alignment:
Q  54 caaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 100  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||||    
T  26717137 caaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 2961596 - 2961551
Alignment:
Q  260 atgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||    
T  2961596 atgtggtaattgaatgaaaaaataataacgaaaaggaactgttata 2961551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 3333051 - 3333128
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||||||||||||||  |||||| ||||||| ||||  |||| ||| |||   ||||||||||||| ||||||||    
T  3333051 aaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagcct 3333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 19565 - 19487
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||||||    
T  19565 caaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcct 19487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 318 - 233
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    |||||| |||||||| |||||||||||  |||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  318 taggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 996 - 1056
Alignment:
Q  19 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 79  Q
    ||||||||||||| |||||||||||  || ||||||||||||||||  |||| ||||||||    
T  996 gggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaa 1056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 5457 - 5540
Alignment:
Q  20 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||| ||||||||||||||||||| ||| |||  |||||||||||| |||||||| |||  |||||||||||||||||||||||    
T  5457 gggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagcct 5540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 4527 - 4441
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||  ||||||||| |||||||| ||| ||| | ||||||| ||| |||||||| |||  |||| ||| ||||||||||||||    
T  4527 taggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagcct 4441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 49449 - 49535
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| |||||||||||||||| | | |||||| ||||||||||||  |||| |||||||| ||| |||||||||||||||||||    
T  49449 tagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcct 49535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 133 - 220
Alignment:
Q  15 catagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  133 catagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 2481 - 2564
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaag-gttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    |||||||||||||| || ||||||||| |||||||  ||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  2481 tagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 7104 - 7187
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaag-gttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    |||||||||||||| || ||||||||| |||||||  ||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  7104 tagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 1524 - 1438
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    ||||||| ||||||| |||||||| ||  ||||||  |||||||||||| |||| |||||||  ||||||||||| |||||||||||    
T  1524 tagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcct 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 3324 - 3409
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||| |||||||| |||||||||||  || |||  |||||||| ||| ||||||||| ||| |||||||||||||||||||||||    
T  3324 taggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcactttagcct 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 4754 - 4829
Alignment:
Q  25 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 101  Q
    |||||||||||||| |||||||||||| ||||||||||| | |||| |||||| | || || |||||||||||||||    
T  4754 caaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcactttagc 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 49109 - 49185
Alignment:
Q  26 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||  || ||||| | ||||||||||||| |||| |||||||| || ||||||||||| |||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 37232 - 37148
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgc-aaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||| ||  |||| |||| ||  ||||||||||||||||||||||    
T  37232 tagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata--gggggaaaagtgcactttagcc 37148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 6428 - 6346
Alignment:
Q  17 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 99  Q
    ||||||| |||||||||||||||||||  |||||| | ||||| | ||  |||||||| |||| || ||||||||||||||||    
T  6428 tagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 23152 - 23081
Alignment:
Q  29 attgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 102  Q
    ||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  23152 attgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 23081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 23931 - 23992
Alignment:
Q  42 tatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 103  Q
    |||||||||  ||||||||||||| ||||||||||||  | |  ||||||||||||||||||    
T  23931 tatttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcactttagcct 23992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 8401 - 8341
Alignment:
Q  244 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    ||||||| |||| | |||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  8401 atgaaaaagaaccgttatgtggtaattaaaagaaaaa-taataatgaaaaggaactgctata 8341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 18314 - 18254
Alignment:
Q  244 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    ||||||| |||| | |||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  18314 atgaaaaagaaccgttatgtggtaattaaaagaaaaa-taataatgaaaaggaactgctata 18254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 20668 - 20728
Alignment:
Q  244 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 305  Q
    ||||||| |||| | |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  20668 atgaaaaagaaccgttatgtggtaattaaaagaaaa-ataataatgaaaaggaactgctata 20728  T

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