View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0622_low_119 (Length: 259)
Name: NF0622_low_119
Description: NF0622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0622_low_119 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 31622918 - 31623126
Alignment:
| Q |
30 |
ggaagtagctccagaagcgagggggacagtgggagaagacgcggttggcttcgtgaagaagaaccggcagaaaccgcggggcgccgctaccgctgcagcc |
129 |
Q |
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| T |
31622918 |
ggaagtaactccagaagaaagggggacagtgggagaagacgcggttggcttcgtgcagaagaaccggcagaaaccgcggggcgccgctaccgctgcagcc |
31623017 |
T |
|
| Q |
130 |
ctcatcgtcaaagccaaagcagccacgggtttaagctaaaatgtaaaaccctttcgttggttgaaggagacgttgagagaagaaagaattgttccttcgc |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
31623018 |
ctcatcgtcaaagccaaagcagccacgggtttaagctaaaatgtaaaacgctttcgtgggttgaaggagacgttgagagaagaaagaattgttccttcgc |
31623117 |
T |
|
| Q |
230 |
ttaatttca |
238 |
Q |
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||||||||| |
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| T |
31623118 |
ttaatttca |
31623126 |
T |
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