View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0622_low_20 (Length: 650)

Name: NF0622_low_20
Description: NF0622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0622_low_20
NF0622_low_20
[»] chr5 (22 HSPs)
chr5 (222-642)||(25564995-25565406)
chr5 (29-136)||(35700936-35701044)
chr5 (29-118)||(41638250-41638339)
chr5 (29-112)||(2020882-2020965)
chr5 (29-112)||(41694878-41694961)
chr5 (29-136)||(27480267-27480375)
chr5 (29-136)||(32760638-32760741)
chr5 (333-422)||(25589525-25589613)
chr5 (29-112)||(1658078-1658161)
chr5 (527-642)||(25589246-25589361)
chr5 (29-107)||(10295389-10295467)
chr5 (29-118)||(38928799-38928888)
chr5 (29-112)||(26149503-26149587)
chr5 (32-112)||(38302453-38302533)
chr5 (29-112)||(4649084-4649167)
chr5 (29-112)||(17092799-17092882)
chr5 (62-119)||(1176062-1176119)
chr5 (32-80)||(35868766-35868814)
chr5 (62-102)||(15058577-15058617)
chr5 (62-102)||(15062040-15062080)
chr5 (62-118)||(35683603-35683659)
chr5 (65-113)||(35704610-35704658)
[»] chr8 (18 HSPs)
chr8 (29-136)||(6694-6802)
chr8 (29-136)||(4734593-4734696)
chr8 (29-136)||(36906068-36906171)
chr8 (29-136)||(3404670-3404778)
chr8 (29-136)||(1942130-1942237)
chr8 (29-136)||(37659628-37659736)
chr8 (29-136)||(2474863-2474966)
chr8 (29-113)||(25033280-25033364)
chr8 (32-136)||(34272390-34272496)
chr8 (29-136)||(36102987-36103095)
chr8 (29-112)||(31297444-31297527)
chr8 (235-310)||(23340571-23340644)
chr8 (29-101)||(34304628-34304700)
chr8 (29-112)||(13865188-13865271)
chr8 (29-112)||(29611893-29611976)
chr8 (235-310)||(23386608-23386681)
chr8 (48-136)||(43733236-43733325)
chr8 (68-112)||(1840341-1840385)
[»] chr1 (39 HSPs)
chr1 (29-136)||(38794846-38794954)
chr1 (29-136)||(40707295-40707403)
chr1 (29-136)||(42488724-42488827)
chr1 (29-113)||(1688313-1688397)
chr1 (29-136)||(7401624-7401732)
chr1 (29-136)||(27499860-27499968)
chr1 (29-113)||(30538846-30538930)
chr1 (29-136)||(47905786-47905894)
chr1 (29-108)||(2926031-2926110)
chr1 (30-136)||(14152581-14152683)
chr1 (29-114)||(33991440-33991525)
chr1 (29-136)||(938335-938443)
chr1 (29-113)||(17688238-17688322)
chr1 (29-136)||(43572049-43572156)
chr1 (29-136)||(26757252-26757356)
chr1 (29-107)||(13255250-13255328)
chr1 (29-136)||(26940482-26940590)
chr1 (29-132)||(39889755-39889859)
chr1 (29-112)||(23871560-23871643)
chr1 (29-112)||(42162150-42162233)
chr1 (29-136)||(896592-896695)
chr1 (29-118)||(13061497-13061586)
chr1 (33-136)||(12293686-12293790)
chr1 (29-101)||(32295556-32295628)
chr1 (32-136)||(28773479-28773579)
chr1 (29-136)||(1523469-1523578)
chr1 (62-136)||(50476427-50476497)
chr1 (29-136)||(50247471-50247579)
chr1 (29-136)||(51246660-51246768)
chr1 (76-136)||(39179250-39179311)
chr1 (65-112)||(7915414-7915461)
chr1 (29-136)||(15463700-15463804)
chr1 (65-118)||(50586943-50586996)
chr1 (29-136)||(8156435-8156539)
chr1 (29-95)||(17675116-17675182)
chr1 (48-136)||(17556544-17556633)
chr1 (79-136)||(1278355-1278408)
chr1 (50-118)||(2175222-2175290)
chr1 (67-130)||(11017481-11017545)
[»] chr4 (34 HSPs)
chr4 (32-136)||(7182291-7182396)
chr4 (29-136)||(38317326-38317434)
chr4 (29-136)||(38365905-38366013)
chr4 (29-136)||(41363909-41364017)
chr4 (29-112)||(48830912-48830995)
chr4 (29-136)||(13270370-13270473)
chr4 (29-136)||(16535567-16535675)
chr4 (29-113)||(47669708-47669792)
chr4 (29-136)||(52594721-52594829)
chr4 (29-136)||(904078-904181)
chr4 (29-101)||(37756810-37756882)
chr4 (29-112)||(31529920-31530003)
chr4 (32-136)||(32948617-32948722)
chr4 (29-136)||(32060565-32060673)
chr4 (29-111)||(56504565-56504647)
chr4 (29-118)||(24279809-24279898)
chr4 (29-136)||(50641933-50642039)
chr4 (29-136)||(54806351-54806459)
chr4 (29-136)||(41844318-41844419)
chr4 (29-107)||(20533833-20533911)
chr4 (36-136)||(31187198-31187299)
chr4 (32-112)||(32651363-32651443)
chr4 (32-95)||(17873114-17873177)
chr4 (29-108)||(21730421-21730500)
chr4 (29-118)||(3127108-3127197)
chr4 (29-110)||(13269856-13269937)
chr4 (64-113)||(30765602-30765651)
chr4 (66-111)||(45022853-45022898)
chr4 (40-136)||(46177035-46177132)
chr4 (29-113)||(21296202-21296286)
chr4 (29-113)||(36151467-36151551)
chr4 (62-113)||(17622593-17622645)
chr4 (29-65)||(49404720-49404756)
chr4 (65-136)||(52636637-52636709)
[»] chr7 (22 HSPs)
chr7 (29-136)||(3658608-3658716)
chr7 (29-136)||(33810309-33810417)
chr7 (29-136)||(33113738-33113841)
chr7 (29-136)||(7667261-7667370)
chr7 (29-136)||(33406729-33406837)
chr7 (29-136)||(34652148-34652256)
chr7 (29-108)||(23620890-23620969)
chr7 (29-136)||(36747172-36747281)
chr7 (29-136)||(47276099-47276208)
chr7 (29-136)||(5968140-5968247)
chr7 (29-118)||(3571856-3571945)
chr7 (62-118)||(46745716-46745772)
chr7 (29-108)||(19644206-19644285)
chr7 (29-112)||(46449076-46449159)
chr7 (29-95)||(28437639-28437705)
chr7 (29-94)||(42620448-42620513)
chr7 (29-113)||(43188770-43188854)
chr7 (65-111)||(42113090-42113136)
chr7 (51-112)||(23325720-23325781)
chr7 (29-109)||(41002348-41002427)
chr7 (29-108)||(23550695-23550773)
chr7 (29-81)||(25335236-25335288)
[»] chr2 (30 HSPs)
chr2 (29-136)||(12964069-12964177)
chr2 (29-136)||(30312502-30312605)
chr2 (29-136)||(10165291-10165399)
chr2 (29-136)||(18018693-18018801)
chr2 (29-112)||(4041865-4041948)
chr2 (29-136)||(18780258-18780368)
chr2 (29-136)||(44137033-44137136)
chr2 (29-136)||(3039045-3039153)
chr2 (29-136)||(31550346-31550454)
chr2 (29-112)||(18826329-18826412)
chr2 (29-112)||(36567375-36567457)
chr2 (29-110)||(8555873-8555954)
chr2 (29-118)||(1725804-1725894)
chr2 (29-136)||(3119947-3120055)
chr2 (29-113)||(32243375-32243459)
chr2 (47-136)||(38293765-38293850)
chr2 (29-136)||(8411027-8411131)
chr2 (29-112)||(38023542-38023625)
chr2 (29-136)||(8991060-8991166)
chr2 (29-132)||(14008424-14008529)
chr2 (29-102)||(25960707-25960780)
chr2 (65-136)||(16519221-16519293)
chr2 (65-136)||(16625914-16625986)
chr2 (29-113)||(725855-725939)
chr2 (65-136)||(4003304-4003376)
chr2 (29-112)||(5322215-5322298)
chr2 (29-112)||(13766035-13766118)
chr2 (29-112)||(44020253-44020338)
chr2 (29-93)||(19382798-19382862)
chr2 (65-136)||(39180956-39181027)
[»] chr3 (29 HSPs)
chr3 (29-112)||(41962072-41962155)
chr3 (29-112)||(43007593-43007676)
chr3 (29-136)||(34306023-34306131)
chr3 (32-136)||(47789546-47789651)
chr3 (29-136)||(30131983-30132090)
chr3 (29-112)||(43237192-43237275)
chr3 (29-112)||(49683098-49683181)
chr3 (29-136)||(46312518-46312621)
chr3 (29-118)||(17642485-17642574)
chr3 (29-118)||(47714769-47714858)
chr3 (29-113)||(38526053-38526137)
chr3 (29-112)||(3043215-3043298)
chr3 (29-112)||(24242189-24242272)
chr3 (29-112)||(33982816-33982899)
chr3 (29-136)||(42583368-42583471)
chr3 (29-111)||(49860738-49860820)
chr3 (48-112)||(36796324-36796388)
chr3 (29-136)||(31178343-31178450)
chr3 (29-112)||(38515152-38515234)
chr3 (29-136)||(44412251-44412355)
chr3 (29-112)||(55439485-55439568)
chr3 (29-112)||(25428571-25428654)
chr3 (29-94)||(23163443-23163508)
chr3 (29-136)||(39499071-39499182)
chr3 (29-136)||(45555513-45555617)
chr3 (29-136)||(46017104-46017212)
chr3 (73-136)||(2420541-2420605)
chr3 (29-97)||(30995787-30995855)
chr3 (65-136)||(53620165-53620237)
[»] scaffold0028 (1 HSPs)
scaffold0028 (29-136)||(35551-35659)
[»] chr6 (11 HSPs)
chr6 (29-136)||(24734763-24734866)
chr6 (29-112)||(29241930-29242013)
chr6 (29-108)||(1029198-1029277)
chr6 (62-136)||(2365727-2365802)
chr6 (29-112)||(5825234-5825317)
chr6 (49-113)||(26574512-26574576)
chr6 (62-136)||(26481257-26481332)
chr6 (48-136)||(31345486-31345575)
chr6 (29-112)||(4910012-4910094)
chr6 (29-136)||(34914503-34914611)
chr6 (29-95)||(14275904-14275970)
[»] scaffold0952 (1 HSPs)
scaffold0952 (29-112)||(3769-3852)
[»] scaffold0013 (1 HSPs)
scaffold0013 (29-113)||(107776-107859)
[»] scaffold0059 (2 HSPs)
scaffold0059 (29-113)||(75903-75986)
scaffold0059 (29-113)||(67798-67881)
[»] scaffold1562 (1 HSPs)
scaffold1562 (29-118)||(33-122)
[»] scaffold1158 (1 HSPs)
scaffold1158 (29-118)||(2471-2560)
[»] scaffold0245 (1 HSPs)
scaffold0245 (79-136)||(4032-4085)
[»] scaffold0229 (1 HSPs)
scaffold0229 (79-136)||(4363-4416)


Alignment Details
Target: chr5 (Bit Score: 281; Significance: 1e-157; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 222 - 642
Target Start/End: Complemental strand, 25565406 - 25564995
Alignment:
Q  222 tgtacacaacaaacaattaccaattgatagaagccattcagacacaatttcaacctcaaatttctagtgcaacataaggaaaggttaaacaatacaacat 321  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25565406 tgtacacaacaatcaattaccaactgatagcagccattcagacacaatttcaacctcaaatttctagtgcaacataaggaaaggttaaacaatacaacag 25565307  T
Q  322 attgaatgaaaattaaacaaacaaaccatgcaaataattgttcacaagttcatccatgtggcgaagacgatcacaaataaaatcaaaaacatacaac--- 418  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||| | |||||||||||||||||| || |||||||||||||       
T  25565306 attgaatgaaaattaaac--------catgcaaataattgttcacaagttcatccatgtcgtgaagacgatcacaaataagataaaaaacatacaacaat 25565215  T
Q  419 --aatacagtacaatttctttatagcttagctaaagctatctctaacaacatctgatcgatgnnnnnnnataaattggatccaagacctgtttattgcgc 516  Q
      |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  25565214 agaatacaatagaatttctttatagcttagctaaagctatccctaacaacatctgatcgatgcttttttataaattggatccaagacctgtttattgcgc 25565115  T
Q  517 tccttctcattctcattgatatctctaattcgtgttgttcttcttaacttcttagaaaaccaaaagaaacatttacttgatctttcgtccttcgatccaa 616  Q
    |||      |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25565114 tcc------ttctcattgatatctctaattcgtgtagttcttcttaacttcttagaaaaccaaaagaaacatttacttgatctttcgtccttcgatccaa 25565021  T
Q  617 tcgcgctattcttgggtccctatgct 642  Q
    ||||||||||||||||||||| ||||    
T  25565020 tcgcgctattcttgggtccctttgct 25564995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 35701044 - 35700936
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| || ||||||| ||||||||||||||||||| |||||||||| | ||||||||| ||    
T  35701044 aaaattaacctccaaagccctctcctcccaatgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactc 35700945  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  35700944 ccaaacaaa 35700936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 41638339 - 41638250
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||  ||||||||| |||||||||||||||||||||| ||||||| ||||    
T  41638339 aaaattaacttccaaaactctctcctcctaatgtcttctatttcatccacttgctccttccttttttccaaaactcttccctcccttccc 41638250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 2020965 - 2020882
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| ||||||||||| ||| ||| |||||| |||||||||| ||||||||||||||||||| |||||||||    
T  2020965 aaaattaacctccaaagctctctcctcccaatgtctactatttcttccacttgctccttccttttttccaaaaccctcccctcc 2020882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 41694961 - 41694878
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||||||||||||| | ||| |||||||||| |||||||||| |||||||||||| |||||| |||||||||    
T  41694961 aaaattaacctccaaaactctctccttccaatgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 41694878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 27480267 - 27480375
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc-catccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| ||||||||||  |||||||||||||||||| ||||||||| |  |||| |||| ||    
T  27480267 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgcttcttccttttttccaaaaccctcccctcctctccccttcaaactc 27480366  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  27480367 ccaaacaaa 27480375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 32760741 - 32760638
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||| ||||| |||||| ||| ||||||||||||||||||| ||||||||    ||||||||| |||    
T  32760741 aaaattaacctccaaagccctctcctcctaatgtcttatatttcttccacctgctccttccttttttccaaaaccctcccctc----ccctccaaactcc 32760646  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  32760645 caaacaaa 32760638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 25589613 - 25589525
Alignment:
Q  333 attaaacaaacaaaccatgcaaataattgttcacaagttcatccatgtggcgaagacgatcacaaataaaatcaaaaacatacaacaata 422  Q
    |||||||||||||| ||||||||||||||||||| | |||  |||||||| |||||||| ||||||||| ||| ||||||||||||||||    
T  25589613 attaaacaaacaaatcatgcaaataattgttcacgatttcgcccatgtggtgaagacgaacacaaataacatc-aaaacatacaacaata 25589525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 1658161 - 1658078
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||||||||   ||||||||| ||| |||||||||| |||||||||| ||||||||||||| ||||| |||||||||    
T  1658161 aaaattaacctccaaagtcctctcctcccaatgtcttctatttcttccacttgctccttccttttttctaaaaccctcccctcc 1658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 642
Target Start/End: Complemental strand, 25589361 - 25589246
Alignment:
Q  527 tctcattgatatctctaattcgtgttgttcttcttaacttcttagaaaaccaaaagaaacatttacttgatctttcgtccttcgatccaatcgcgctatt 626  Q
    |||||||||| ||||||||||||||  |||||| || |||||||||||||||||| ||||||  ||||||||||| |  ||| | | |||||  ||||||    
T  25589361 tctcattgatgtctctaattcgtgtaattcttcctagcttcttagaaaaccaaaacaaacatccacttgatctttgggtctttgcttcaatcatgctatt 25589262  T
Q  627 cttgggtccctatgct 642  Q
    ||||||||||| ||||    
T  25589261 cttgggtccctttgct 25589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 10295467 - 10295389
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcc 107  Q
    |||||||||||||||| |  |||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  10295467 aaaattaacctccaaagccatctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcc 10295389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 38928799 - 38928888
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    ||||||||||||||||   ||||| | | ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||    
T  38928799 aaaattaacctccaaagtcctctcattccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccc 38928888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 26149587 - 26149503
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctt-ttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||  |||||||| |||| ||||||||||||||||    
T  26149587 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgatccttccttttttttcaaaactctcccctcc 26149503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 38302453 - 38302533
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||||| | ||||||||  ||| |||||||||| |||||||||| |||||||||||| |||||| |||||||||    
T  38302453 attaacctccaaagccctctcctctcaatgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 38302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 4649084 - 4649167
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||| |||| | ||||||||  ||| |||||||||| |||||||||| | ||| ||||||||||||| |||||||||    
T  4649084 aaaattaaccttcaaagccctctcctctcaatgtcttctatttcttccacttgctcattctttttttccaaaaccctcccctcc 4649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 17092882 - 17092799
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||| ||||||| | ||||||| | ||| |||||||| | |||||||||| ||||| ||||||||||||| |||||||||    
T  17092882 aaaattaatctccaaagccctctccttccaatgtcttctatatcttccacttgctccttctttttttccaaaaccctcccctcc 17092799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 1176062 - 1176119
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccct 119  Q
    |||||||||  |||||||||| ||||||||||||||||| | |||||||||| |||||    
T  1176062 tcttctattccttccacttgctccttccttttttccaaagccctcccctcccttccct 1176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 35868814 - 35868766
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccactt 80  Q
    ||||||||||||||| ||||||||| ||| |||||||||| ||||||||    
T  35868814 attaacctccaaaaccctctcctcccaatgtcttctatttcttccactt 35868766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 15058577 - 15058617
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaac 102  Q
    |||| ||||| |||||||||| |||||||||||||||||||    
T  15058577 tcttttatttcttccacttgctccttccttttttccaaaac 15058617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 15062040 - 15062080
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaac 102  Q
    |||||||||| |||||||| | |||||||||||||||||||    
T  15062040 tcttctatttgttccacttactccttccttttttccaaaac 15062080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 35683603 - 35683659
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    |||||||||| |||||||||| | |||||||||||| ||||  ||||||||| ||||    
T  35683603 tcttctatttcttccacttgctcattccttttttcctaaaccttcccctcccttccc 35683659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 35704658 - 35704610
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    ||||||| |||||||||  ||||||||||| ||||||| ||||||||||    
T  35704658 tctatttcttccacttgttccttcctttttcccaaaaccctcccctccc 35704610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 6802 - 6694
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||| |  |||||||| ||    
T  6802 aaaattaacctccaaagctctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctatcctccaaactc 6703  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  6702 ccaaacaaa 6694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 4734593 - 4734696
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||||| ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||    ||||||||| |||    
T  4734593 aaaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctc----ccctccaaactcc 4734688  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  4734689 caaacaaa 4734696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 36906171 - 36906068
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||    ||||||||| |||    
T  36906171 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctc----ccctccaaactcc 36906076  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  36906075 caaacaaa 36906068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 3404670 - 3404778
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||| ||||||| |  |||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||| | ||||||||| ||    
T  3404670 aaaattaatctccaaagccttctcctcctaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactc 3404769  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  3404770 ccaaacaaa 3404778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 1942130 - 1942237
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||  |||||||||||| |||||| |||||||||| | ||||||||| ||    
T  1942130 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgatccttcctttttt-caaaaccctcccctcccttcccctccaaactc 1942228  T
Q  128 ccaaacaaa 136  Q
    | |||||||    
T  1942229 ctaaacaaa 1942237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 37659628 - 37659736
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    ||||||||| |||||| | ||||||||| ||| |||||||||| |||||||  | ||||||||||||||||||| |||||||||| | |||| |||| ||    
T  37659628 aaaattaacatccaaagccctctcctcccaatgtcttctatttcttccactcactccttccttttttccaaaaccctcccctcccttccccttcaaactc 37659727  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  37659728 ccaaacaaa 37659736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 2474863 - 2474966
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||| ||||||||| ||||||||| ||| |||||||||| |||||||| | |||||||||||| |||||  ||||||||    ||||||||| |||    
T  2474863 aaaattaatctccaaaaccctctcctcccaatgtcttctatttcttccacttactccttcctttttttcaaaatcctcccctc----ccctccaaactcc 2474958  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  2474959 caaacaaa 2474966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 25033364 - 25033280
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||| |||||||||||  || |||||||||| |||||||| | ||||||||||||| ||||  ||||||||||    
T  25033364 aaaattaacctccaaagctctctcctcccgatgtcttctatttcttccacttactccttccttttttctaaaatcctcccctccc 25033280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 34272496 - 34272390
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctt-ttttccaaaactctcccctcccat-ccctccaaaatccc 129  Q
    ||||||||||||| | ||||||||  ||| |||||||||| |||||||||| |||||||| ||||||||||  |||||||||| | |||| |||| ||||    
T  34272496 attaacctccaaagccctctcctctcaatgtcttctatttcttccacttgctccttcctttttttccaaaatcctcccctcccttccccttcaaactccc 34272397  T
Q  130 aaacaaa 136  Q
    |||||||    
T  34272396 aaacaaa 34272390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 36102987 - 36103095
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatc-cctccaaaatc 127  Q
    |||||||||||||||| | |||||| || ||| |||||||||| |||||| | | |||||||||||| |||||  |||||||||| || |||||||| |     
T  36102987 aaaattaacctccaaagccctctccacccaatgtcttctatttcttccacctactccttcctttttttcaaaatcctcccctcccctctcctccaaactt 36103086  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  36103087 ccaaacaaa 36103095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 31297444 - 31297527
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||| |||| |  |||||||| ||| |||||||||| |||||||||| ||||| ||||||||||||| |||| ||||    
T  31297444 aaaattaaccttcaaagccatctcctcccaatgtcttctatttcttccacttgctccttcattttttccaaaaccctcctctcc 31297527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 23340571 - 23340644
Alignment:
Q  235 caattaccaattgatagaagccattcagacacaatttcaacctcaaatttctagtgcaacataaggaaaggttaaa 310  Q
    ||||||||||  ||||| | |||||||||||||||||||| |||  ||||||||||||||||| ||||||| ||||    
T  23340571 caattaccaacagatagcaaccattcagacacaatttcaatctc--atttctagtgcaacatatggaaaggataaa 23340644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 34304700 - 34304628
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaa 101  Q
    ||||||||||| |||| | ||||| ||  ||| |||||||||| |||||||||| ||||||||||||||||||    
T  34304700 aaaattaaccttcaaagccctctcatcttaatgtcttctatttcttccacttgctccttccttttttccaaaa 34304628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 13865188 - 13865271
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||| ||||   || |||||| ||| |||||||||| |||||||||| ||||| ||||||||||||  |||||||||    
T  13865188 aaaattaaccttcaaagtcctttcctccgaatgtcttctatttcttccacttgctccttcattttttccaaaatcctcccctcc 13865271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 29611976 - 29611893
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||||||| ||| |||| ||||| |||||||||| | || |||||| | ||||| |||||||||    
T  29611976 aaaattaacctccaaagccctctcctcccaatgtcttatatttcttccacttgctcatttctttttccaaaaaccctcccctcc 29611893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 23386681 - 23386608
Alignment:
Q  235 caattaccaattgatagaagccattcagacacaatttcaacctcaaatttctagtgcaacataaggaaaggttaaa 310  Q
    ||||||||||  ||||| | |||||| ||||||||||||| ||||  |||||||||||||||| ||||||| ||||    
T  23386681 caattaccaacagatagcaaccattcggacacaatttcaatctca--tttctagtgcaacatatggaaaggataaa 23386608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 43733236 - 43733325
Alignment:
Q  48 ctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccc-tcccatccctccaaaatcccaaacaaa 136  Q
    ||||||| | ||| |||||||||| |||| ||||| | |||| |||||||||||| |||||| | ||  ||||||||| |||||||||||    
T  43733236 ctctccttccaatgtcttctatttcttcctcttgctcattccctttttccaaaaccctcccctttcctcccctccaaactcccaaacaaa 43733325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 1840341 - 1840385
Alignment:
Q  68 attttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||| |||||||||| ||||||||||||||||| | |||||||||    
T  1840341 atttcttccacttgctccttccttttttccaaacccctcccctcc 1840385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 38794954 - 38794846
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatc-cctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||| || |||||||| ||    
T  38794954 aaaattaacctccaaagccctctcctcccaatatcttctattttttccacttgctccttcctttttttcaaaaccctccactcccctcgcctccaaactc 38794855  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  38794854 ccaaacaaa 38794846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 40707295 - 40707403
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||| ||||| | | ||||||||| ||    
T  40707295 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaactcttccctctcttcccctccaaactc 40707394  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  40707395 ccaaacaaa 40707403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 42488724 - 42488827
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||||| ||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||| |||||||    |||||||||| |||    
T  42488724 aaaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttgctcattccttttttccaaaaccctcccct----tccctccaaactcc 42488819  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  42488820 caaacaaa 42488827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 1688313 - 1688397
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  1688313 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctccc 1688397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 7401624 - 7401732
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc-tccaaaatc 127  Q
    |||||||| ||||||||| ||||||||| ||||| |||||||| |||||| ||| ||||||||||||| ||||| |||||||||| |||| |||||| ||    
T  7401624 aaaattaatctccaaaaccctctcctcctaatattttctatttcttccacctgctccttccttttttctaaaaccctcccctcccctcccttccaaactc 7401723  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  7401724 ccaaacaaa 7401732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 27499968 - 27499860
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| |||||||||||| |||||| |||||||||| | |||| |||| ||    
T  27499968 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcccctccccttcaaactc 27499869  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  27499868 ccaaacaaa 27499860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 30538846 - 30538930
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||||||| | ||||||||||||||||||| |||| |||||    
T  30538846 aaaattaacctccaaaactctctcctcccaatgtcttctatttcttccacttactccttccttttttccaaaacgctcctctccc 30538930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 47905786 - 47905894
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccc-tcccatccctccaaaatc 127  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||| |||||||| | ||||||||||||||||||| |||||| ||||  ||||||||| ||    
T  47905786 aaaactaacctccaaaaccctctcctcccaatgtcttctatttcttccacttactccttccttttttccaaaaccctccccttccctcccctccaaactc 47905885  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  47905886 ccaaacaaa 47905894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 2926031 - 2926110
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctccc 108  Q
    |||||||||||||||| | ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2926031 aaaattaacctccaaagccctctcctcccaatgtcttctattttttccacttgctccttccttttttccaaaaccctccc 2926110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 14152683 - 14152581
Alignment:
Q  30 aaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatccc 129  Q
    ||||||||||||||||| ||||||||| ||| |||||||||| |||||||||| || || ||||||||||||| ||||||||    ||||||||| ||||    
T  14152683 aaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttgctccatcattttttccaaaaccctcccctc----ccctccaaactccc 14152588  T
Q  130 aaacaaa 136  Q
    |||||||    
T  14152587 aaacaaa 14152581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 33991525 - 33991440
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccca 114  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||| ||||||||||||| |||||||||||    
T  33991525 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcattttttccaaaaccctcccctccca 33991440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 938335 - 938443
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttc-cttttttccaaaactctcccctcccatccctccaaaatc 127  Q
    |||||||||||||||||| ||||||||  |||||||||||||| |||||||||  |||||  ||||||||||||| ||||||| |  |||||||||| ||    
T  938335 aaaattaacctccaaaaccctctcctctcaatatcttctatttcttccacttgatccttcttttttttccaaaaccctccccttctctccctccaaagtc 938434  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  938435 ccaaacaaa 938443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 17688322 - 17688238
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||| | ||||||||| ||| | |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  17688322 aaaattaacctccaaagccctctcctcccaatgttttctatttcttccacttgctccttccttttttccaaaaccctcccctccc 17688238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 43572049 - 43572156
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| | |||||||||| ||||||||| ||||||| | ||||||||| ||    
T  43572049 aaaattaacctccaaagccctctcctcc-aatgtcttctatttcttccacttgctcattcctttttttcaaaactctgccctcccctcccctccaaactc 43572147  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  43572148 ccaaacaaa 43572156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 26757252 - 26757356
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcc-ttttttccaaaactctcccctcccatccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| |||||||||||||| ||||| |||| |||||| ||||||||||||| ||||||||    ||||||||| ||    
T  26757252 aaaattaacctccaaagccctctcctcccaatatcttctatttcttccatttgctccttcctttttttccaaaaccctcccctc----ccctccaaactc 26757347  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  26757348 ccaaacaaa 26757356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 13255328 - 13255250
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcc 107  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  13255328 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcc 13255250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 26940590 - 26940482
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc-catccctccaaaatc 127  Q
    |||||||||| || || ||||||||| | ||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||| |  ||||||||| ||    
T  26940590 aaaattaacccccgaagctctctccttccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcctctcccctccaaactc 26940491  T
Q  128 ccaaacaaa 136  Q
     ||||||||    
T  26940490 tcaaacaaa 26940482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 39889755 - 39889859
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccc-tcccatccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| ||||||||||||||||||| | ||||||  ||||||||||| |||||| ||||  ||||||||| ||    
T  39889755 aaaattaacctccaaagccctctcctcccaatgtcttctattttttccacttactccttcccattttccaaaaccctccccttccctcccctccaaactc 39889854  T
Q  128 ccaaa 132  Q
    |||||    
T  39889855 ccaaa 39889859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 23871560 - 23871643
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||| |||||| | ||||||||  ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  23871560 aaaattaacttccaaagccctctcctctcaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 23871643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 42162150 - 42162233
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||||| ||||||| | ||| || ||||||| |||||||||| ||||||||||||||||||  |||||||||    
T  42162150 aaaattaacctccaaaaccctctccttccaatgtcatctatttcttccacttgctccttccttttttccaaaatcctcccctcc 42162233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 896592 - 896695
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| |  |||||||| |||||||| |||| ||||||||||| ||||| ||||||||||||  ||||||||    ||||||||| |||    
T  896592 aaaattaacctccaaagccttctcctcccaatatcttttattctttccacttgctccttctttttttccaaaatcctcccctc----ccctccaaactcc 896687  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  896688 caaacaaa 896695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 13061497 - 13061586
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    |||||||||||||||| | ||||| ||| ||| ||||| |||| |||||||||| ||||||||||||||||||| || ||||||| ||||    
T  13061497 aaaattaacctccaaagccctctcttccgaatgtcttcaatttcttccacttgctccttccttttttccaaaacccttccctcccctccc 13061586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 12293790 - 12293686
Alignment:
Q  33 ttaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctc-ccatccctccaaaatcccaa 131  Q
    |||||||||| | | ||||||||| | | |||||||||| |||||||||  ||||||||||||||||||| |||||||| ||  ||||||||| ||||||    
T  12293790 ttaacctccatagccctctcctcccagtttcttctatttcttccacttgatccttccttttttccaaaaccctcccctctcctcccctccaaactcccaa 12293691  T
Q  132 acaaa 136  Q
    |||||    
T  12293690 acaaa 12293686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 32295628 - 32295556
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaa 101  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||| ||||||||||||    
T  32295628 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttctttttttccaaaa 32295556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 28773479 - 28773579
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcccaa 131  Q
    ||||||||||| ||| ||||||||| ||| ||||| ||||||||||| |||  ||| |||||||||||||| ||||||||    ||||||||| ||||||    
T  28773479 attaacctccataaccctctcctcccaatgtcttcaattttttccacatgctactttcttttttccaaaaccctcccctc----ccctccaaactcccaa 28773574  T
Q  132 acaaa 136  Q
    |||||    
T  28773575 acaaa 28773579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 1523578 - 1523469
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctt-ttttccaaaactctcccctcccat-ccctccaaaat 126  Q
    |||||||||||||| | | ||||||||| ||| |||||||||| |||||| ||| |||||||| ||||||||||| |||  ||||||| ||||||||| |    
T  1523578 aaaattaacctccatagccctctcctcccaatgtcttctatttcttccacctgctccttcctttttttccaaaaccctcatctcccatcccctccaaact 1523479  T
Q  127 cccaaacaaa 136  Q
    | ||||||||    
T  1523478 ctcaaacaaa 1523469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 50476497 - 50476427
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcccaaacaaa 136  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||    ||||||||| |||||||||||    
T  50476497 tcttctatttcttccacttgctccttccttttttccaaaaccctcccctc----ccctccaaactcccaaacaaa 50476427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 50247579 - 50247471
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccct-cccatccctccaaaatc 127  Q
    |||||||||||||||| | ||||||| | ||| |||||||||| |||||||||  ||||||||||||| | |||  |||||| ||| ||||| |||| ||    
T  50247579 aaaattaacctccaaagccctctccttcgaatgtcttctatttcttccacttgttccttccttttttctataaccatcccctccccttcccttcaaactc 50247480  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  50247479 ccaaacaaa 50247471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 51246660 - 51246768
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||| ||| | || |||||| ||| |||||||||| || ||||||| |||| ||||||| |||||| ||| |||||| | ||||||||| ||    
T  51246660 aaaattaacctctaaagccctttcctcccaatgtcttctatttctttcacttgctcctttctttttttcaaaaccctctcctcccctcccctccaaactc 51246759  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  51246760 ccaaacaaa 51246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 39179250 - 39179311
Alignment:
Q  76 cacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    ||||||| ||||||||||||||||||| |||||||||| | ||||||||| |||||||||||    
T  39179250 cacttgctccttccttttttccaaaaccctcccctcccttcccctccaaactcccaaacaaa 39179311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 7915461 - 7915414
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  7915461 tctattttttccacttgctccttccttttttcaaaaaccctcccctcc 7915414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 15463804 - 15463700
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttt-tccaaaactctcccctcccatccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| |||  ||||||||| ||||||||||   ||||||||| |||||||  ||||||||    ||||||||| ||    
T  15463804 aaaattaacctccaaagccctctcctcccaatgacttctatttcttccacttgcttattcctttttatccaaaatcctcccctc----ccctccaaattc 15463709  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  15463708 ccaaacaaa 15463700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 50586996 - 50586943
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    ||||||| |||||||||| ||||||||||||||||| |||||| ||||| ||||    
T  50586996 tctatttcttccacttgctccttccttttttccaaagctctcctctcccttccc 50586943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 8156435 - 8156539
Alignment:
Q  29 aaaattaacctccaaaa-ctctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatc 127  Q
    ||||||||||||||||| | ||||||| | ||| | |||||||| || ||||||| |||| |||| || |||||| ||||||||    ||||||||| ||    
T  8156435 aaaattaacctccaaaagccctctccttccaatgttttctatttctttcacttgctcctttctttctttcaaaaccctcccctc----ccctccaaactc 8156530  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  8156531 ccaaacaaa 8156539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 17675182 - 17675116
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctttttt 95  Q
    ||||||||||||||||||  ||| |||| |||  ||||||||| |||||| ||| ||||||||||||    
T  17675182 aaaattaacctccaaaaccttcttctcccaatgccttctatttcttccacatgctccttcctttttt 17675116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 17556633 - 17556544
Alignment:
Q  48 ctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    ||||||||| ||| || ||||||| |||||||| | |||||||||||| |  ||| |||||||||| | ||||||||| || ||||||||    
T  17556633 ctctcctcccaatgtcctctatttcttccacttactccttcctttttttctgaaccctcccctcccttcccctccaaactcgcaaacaaa 17556544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 1278408 - 1278355
Alignment:
Q  79 ttgccccttccttttttccaaaactctcccctcccatccctccaaaatcccaaacaaa 136  Q
    |||| |||||||| |||||||||||||||||||    ||||||||| |||||||||||    
T  1278408 ttgctccttccttgtttccaaaactctcccctc----ccctccaaactcccaaacaaa 1278355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 2175290 - 2175222
Alignment:
Q  50 ctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    ||||||| |||||||||||||| || ||||| | |||| ||| |||||||||  |||||||||| ||||    
T  2175290 ctcctcccaatatcttctatttctttcacttactcctttcttatttccaaaatcctcccctcccctccc 2175222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 11017545 - 11017481
Alignment:
Q  67 tattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatccca 130  Q
    ||||| |||||||||| ||||||||||||||||||  || ||||||| | ||||||||| |||||    
T  11017545 tatttcttccacttgctccttccttttttccaaaatccttccctcccctcccctccaaactccca 11017481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 7182291 - 7182396
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatccca 130  Q
    ||||||||||||| ||||||||||  ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||| | ||||||||| |||||    
T  7182291 attaacctccaaagctctctcctctcaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactccca 7182390  T
Q  131 aacaaa 136  Q
    ||||||    
T  7182391 aacaaa 7182396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 38317326 - 38317434
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| ||| |||||| | |||||| || ||    
T  38317326 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctctcctcccctcccctcccaactc 38317425  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  38317426 ccaaacaaa 38317434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 38366013 - 38365905
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    ||||||||||||||||   ||||||| | ||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||| | ||||||||| ||    
T  38366013 aaaattaacctccaaagtcctctccttccaatgtcttctatttcttccacttgctccttccttttttctaaaactctcccctcccctcccctccaaactc 38365914  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  38365913 ccaaacaaa 38365905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 41363909 - 41364017
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||  | ||||||| | ||||||||| ||    
T  41363909 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccgttccctcccctcccctccaaactc 41364008  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  41364009 ccaaacaaa 41364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 48830912 - 48830995
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  48830912 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 48830995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 13270370 - 13270473
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | |||| |||| ||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||    ||||||||| |||    
T  13270370 aaaattaacctccaaagccctctactcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctc----ccctccaaactcc 13270465  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  13270466 caaacaaa 13270473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 16535675 - 16535567
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc-catccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| |||||||||||||| |||| ||||||||| |  ||||| ||| ||    
T  16535675 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttcccaaaccctcccctcctctcccctctaaactc 16535576  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  16535575 ccaaacaaa 16535567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 47669792 - 47669708
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||| ||| | ||||||||| ||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||    
T  47669792 aaaattaacctcaaaagccctctcctcccaatatcttctattttttccacttgctcctttctttttttcaaaaccctcccctccc 47669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 52594721 - 52594829
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccct-cccatccctccaaaatc 127  Q
    |||||||||||||||||| ||||||| | ||| |||||||||| ||| |||| | |||| |||||||||||||| ||||||| ||| |||||||||| ||    
T  52594721 aaaattaacctccaaaaccctctccttccaatgtcttctatttcttcaacttactcctttcttttttccaaaaccctcccctccccttccctccaaactc 52594820  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  52594821 ccaaacaaa 52594829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 904181 - 904078
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||| ||||||| ||||| ||||||||    ||||||||| |||    
T  904181 aaaattaacctccaaagccctctcctccgaatgtcttctatttcttccacttgctccttctttttttctaaaaccctcccctc----ccctccaaactcc 904086  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  904085 caaacaaa 904078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 37756810 - 37756882
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaa 101  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||    
T  37756810 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaa 37756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 31530003 - 31529920
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||||| |||||||||  || |||||||||| |||||||||| |||||||||| ||||||||  ||||||||    
T  31530003 aaaattaacctccaaaaccctctcctcccgatgtcttctatttcttccacttgctccttccttttctccaaaaccttcccctcc 31529920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 32948617 - 32948722
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc-tccaaaatccca 130  Q
    |||||||  |||||| ||||||| | ||| |||||||||| || ||||||| |||||||||||||| |||| |||||||||| |||| |||||| |||||    
T  32948617 attaaccatcaaaaccctctccttccaatgtcttctatttctttcacttgctccttccttttttccgaaaccctcccctcccctcccttccaaactccca 32948716  T
Q  131 aacaaa 136  Q
    ||||||    
T  32948717 aacaaa 32948722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 32060673 - 32060565
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctc-ccatccctccaaaatc 127  Q
    |||| ||||||||||| | ||||||||| ||| |||||||||| ||| |||| | |||||||||||| |||||||||||| || ||  ||||||||| ||    
T  32060673 aaaactaacctccaaagccctctcctcccaatgtcttctatttattctacttactccttcctttttttcaaaactctcccatctcctcccctccaaactc 32060574  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  32060573 ccaaacaaa 32060565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 56504565 - 56504647
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctc 111  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| || ||||||| ||||||| |||| |||||| ||||||||    
T  56504565 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttgcacttgctccttcctatttttcaaaaccctcccctc 56504647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 24279898 - 24279809
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    ||||||||| |||||| | ||||||||| ||| |||| ||||  |||||||||| ||||||||||||||||||| |||| ||||| ||||    
T  24279898 aaaattaacttccaaagccctctcctcccaatgtcttttattccttccacttgctccttccttttttccaaaaccctccactcccttccc 24279809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 50642039 - 50641933
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatcc-ctccaaaatc 127  Q
    |||||||||||||| | | ||||||| | ||| |||||||||| |||||||||| | |||   |||||||||||||||||||||| ||| ||||||| ||    
T  50642039 aaaattaacctccacatccctctccttccaatgtcttctatttcttccacttgctctttc--attttccaaaactctcccctcccctcctctccaaactc 50641942  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  50641941 ccaaacaaa 50641933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 54806459 - 54806351
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatcc-ctccaaaatc 127  Q
    ||||| ||||| |||| | ||||||||| ||| |||| ||||  |||||||||| || || ||||||||||||| |||||||||| ||| ||||||| ||    
T  54806459 aaaatgaaccttcaaagccctctcctcccaatgtcttttattccttccacttgctccatcattttttccaaaaccctcccctcccttcctctccaaactc 54806360  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  54806359 ccaaacaaa 54806351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 41844419 - 41844318
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| ||  |  ||| ||||||||||||||||||| ||||||||    ||||||||| |||    
T  41844419 aaaattaacctccaaagccctctcctcccaatgtcttctatttctt--aaatgctccttccttttttccaaaaccctcccctc----ccctccaaactcc 41844326  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  41844325 caaacaaa 41844318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 20533911 - 20533833
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcc 107  Q
    ||||||||||||||||    |||||||| ||| |||||||||| |||||||| | ||||||||||||||||||| ||||    
T  20533911 aaaattaacctccaaagtcttctcctcccaatgtcttctatttcttccacttactccttccttttttccaaaaccctcc 20533833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 31187198 - 31187299
Alignment:
Q  36 acctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaaca 134  Q
    ||||||||| | ||||||||| ||| ||||  |||| ||||| ||||  ||||||||||||||||||  ||||||||| | ||||||||| |||||||||    
T  31187198 acctccaaagccctctcctcctaatgtctttaatttcttccagttgcttcttccttttttccaaaaccatcccctcccgtcccctccaaactcccaaaca 31187297  T
Q  135 aa 136  Q
    ||    
T  31187298 aa 31187299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 32651363 - 32651443
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||||| | ||||||||| ||  ||||||| || |||||||| | ||||| ||||||||||||| |||||||||    
T  32651363 attaacctccaaagccctctcctcccaacgtcttctaattcttccacttactccttctttttttccaaaaccctcccctcc 32651443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 17873177 - 17873114
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctttttt 95  Q
    ||||||||||||| | ||||||||| ||| |||||||||| |||||||||| |||| |||||||    
T  17873177 attaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctcctttctttttt 17873114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 21730421 - 21730500
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctccc 108  Q
    ||||||||||| ||||  |||||||||  |||||||||||||| || ||||||| ||||  ||||||||||||| |||||    
T  21730421 aaaattaaccttcaaagttctctcctctcaatatcttctatttctttcacttgctcctttattttttccaaaaccctccc 21730500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 3127108 - 3127197
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    |||||||||||||||| | ||| | ||  ||| |||||||||| || || |||| ||||||||||||||||||  |||||||||| ||||    
T  3127108 aaaattaacctccaaagccctcacttctcaatgtcttctatttctttcatttgctccttccttttttccaaaatcctcccctcccctccc 3127197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 13269937 - 13269856
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccct 110  Q
    ||||||||||| |||| | ||||| ||   || |||||||||| |||||||||| ||||||||||| ||||||| |||||||    
T  13269937 aaaattaaccttcaaagccctctcttcacgatgtcttctatttcttccacttgctccttcctttttcccaaaaccctcccct 13269856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 30765651 - 30765602
Alignment:
Q  64 ttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||| |||||||||| ||||||||||||| ||||||||| ||||||    
T  30765651 ttctatttcttccacttgctccttccttttttctaaaactctctcctccc 30765602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 45022853 - 45022898
Alignment:
Q  66 ctattttttccacttgccccttccttttttccaaaactctcccctc 111  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  45022853 ctattttttccacttgctccttctttttttccaaaaccctcccctc 45022898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 46177035 - 46177132
Alignment:
Q  40 ccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc-atccctccaaaatcccaaacaaa 136  Q
    ||||||| ||| ||||| ||| |  ||||||| |||||||||  ||||| ||||||||||||| ||||||||||  |||||||||| || ||||||||    
T  46177035 ccaaaaccctcccctcccaatgtactctatttcttccacttgttccttctttttttccaaaaccctcccctccctttccctccaaactcacaaacaaa 46177132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 21296202 - 21296286
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    ||||||||||| ||||   || |||||| ||| |||||||||| |||||||| | |||||| |||||||||||| ||||| ||||    
T  21296202 aaaattaacctacaaagtcctttcctcccaatgtcttctatttcttccacttactccttccctttttccaaaaccctcccttccc 21296286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 36151467 - 36151551
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||| | ||| ||||| |||  ||||||||| |||   ||||  |||||||||||||||||| ||||||||||    
T  36151467 aaaattaacctccaaagccctcccctcccaatggcttctatttcttctggttgcttcttccttttttccaaaaccctcccctccc 36151551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 17622593 - 17622645
Alignment:
Q  62 tcttctattttttccacttgccccttcctttt-ttccaaaactctcccctccc 113  Q
    |||||||||| |||||||||| ||||| |||| ||||||||| ||||||||||    
T  17622593 tcttctatttcttccacttgctccttcttttttttccaaaaccctcccctccc 17622645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 49404720 - 49404756
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatctt 65  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  49404720 aaaattaacctccaaagctctctcctccaaatgtctt 49404756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 52636709 - 52636637
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    ||||||| |||||||||| |  ||||||||||||||| |||||| |||| | ||||||||| || ||||||||    
T  52636709 tctatttcttccacttgctcagtccttttttccaaaattctcccatcccttcccctccaaactcgcaaacaaa 52636637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 7e-26; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 3658608 - 3658716
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||| ||||| ||||||||||| ||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| | ||||||||| ||    
T  3658608 aaaattaacccccaaagctctctcctcccaatgtcttctatttcttccacttgctccttccttctttccaaaaccctcccctcccctcccctccaaactc 3658707  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  3658708 ccaaacaaa 3658716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 33810309 - 33810417
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccct-cccatccctccaaaatc 127  Q
    |||||||||||||||||| ||||||||| ||| |||||||||| |||||||| |  |||||||||||||||||||||||| | ||| || ||||||| ||    
T  33810309 aaaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttacttcttccttttttccaaaactctcccatccccttcgctccaaactc 33810408  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  33810409 ccaaacaaa 33810417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 33113738 - 33113841
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||| ||||| ||||||||    ||||||||| |||    
T  33113738 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttctaaaaccctcccctc----ccctccaaactcc 33113833  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  33113834 caaacaaa 33113841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 7667261 - 7667370
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttc-cttttttccaaaactctcccctcccat-ccctccaaaat 126  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| |||||||||| | |||  ||||||||||||| |||||||||| | ||||||||| |    
T  7667261 aaaattaacctccaaagctctctcctcccaatgtcttctatttcttccacttgctcattctattttttccaaaaccctcccctcccctcccctccaaact 7667360  T
Q  127 cccaaacaaa 136  Q
    ||||||||||    
T  7667361 cccaaacaaa 7667370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 33406729 - 33406837
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    ||||||||||| |||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||  ||||| |||||||||| | ||||||||| ||    
T  33406729 aaaattaaccttcaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttttaaaaccctcccctcccctcccctccaaactc 33406828  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  33406829 ccaaacaaa 33406837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 34652148 - 34652256
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactct-cccctcccatccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||| ||||||| || ||||||||  ||||||||| |     
T  34652148 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcctttttcccaaaaccctccccctccctcccctccaaactt 34652247  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  34652248 ccaaacaaa 34652256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 23620890 - 23620969
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctccc 108  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||    
T  23620890 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctccc 23620969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 36747281 - 36747172
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttc-cttttttccaaaactctcccctcccat-ccctccaaaat 126  Q
    |||||||||||||||||| ||||||| | ||| |||||||||| |||||||||| |||||  ||||||||||||| |||||||||| | ||||||||| |    
T  36747281 aaaattaacctccaaaaccctctccttccaatgtcttctatttcttccacttgctccttcatttttttccaaaaccctcccctcccctcccctccaaact 36747182  T
Q  127 cccaaacaaa 136  Q
    | ||||||||    
T  36747181 ctcaaacaaa 36747172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 47276099 - 47276208
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcc-ttttttccaaaactctcccctcccatccc-tccaaaat 126  Q
    |||||||||||||||| | ||||||||||||| |||||||||| ||||| |||| ||| || ||||||| ||||| |||||||||| |||| |||||| |    
T  47276099 aaaattaacctccaaagccctctcctccaaatgtcttctatttcttccatttgctcctccctttttttcaaaaaccctcccctcccctcccatccaaact 47276198  T
Q  127 cccaaacaaa 136  Q
    ||||||||||    
T  47276199 cccaaacaaa 47276208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 5968140 - 5968247
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc-tccaaaatc 127  Q
    |||||||||||||||| | || |||||| ||| |||||||||| |||||||||| |||||| |||||||||||| |||||||||| |||| | |||| ||    
T  5968140 aaaattaacctccaaagcgctttcctcccaatgtcttctatttcttccacttgctccttcc-tttttccaaaaccctcccctcccctccctttcaaactc 5968238  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  5968239 ccaaacaaa 5968247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 3571856 - 3571945
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    ||||||||||||||||   ||||| | | ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||    
T  3571856 aaaattaacctccaaagtcctctctttccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccc 3571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 46745716 - 46745772
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  46745716 tcttctattttttccacttgctccttccttttttccaaaaccctcccctcccctccc 46745772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 19644285 - 19644206
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctccc 108  Q
    |||||||||||||||| ||||||| ||  ||| |||| ||||| |||||||||| ||||||||||||||||||| |||||    
T  19644285 aaaattaacctccaaagctctctcatctcaatgtcttgtatttcttccacttgctccttccttttttccaaaaccctccc 19644206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 46449159 - 46449076
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||| |||||| ||||| ||| ||||| || ||||| |||||||||| | ||||||||||||||||| || ||||||    
T  46449159 aaaattaaccttcaaaaccctctcttcccaatattttttatttcttccacttgctcattccttttttccaaaaccctgccctcc 46449076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 28437639 - 28437705
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctttttt 95  Q
    |||||||||||||||| | ||||||||| ||| |||| ||||| |||||||||| ||||||||||||    
T  28437639 aaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcctttttt 28437705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 42620448 - 42620513
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttt 94  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| | |||||||||    
T  42620448 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctcattccttttt 42620513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 43188854 - 43188770
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    ||||||||||||||| || ||||||||  ||| | |  ||||| |||| ||||| ||||||||||||||||||| ||||||||||    
T  43188854 aaaattaacctccaagaccctctcctctcaatgtttcatatttcttccccttgctccttccttttttccaaaaccctcccctccc 43188770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 42113090 - 42113136
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctc 111  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  42113090 tctatttcttccacttgctccttccttttttccaaaaccctcccctc 42113136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 23325720 - 23325781
Alignment:
Q  51 tcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||| ||| |||||||||| |||||||| | |||||||||||||||||||  ||||||||    
T  23325720 tcctcccaatgtcttctatttcttccacttactccttccttttttccaaaaccgtcccctcc 23325781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 41002348 - 41002427
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccc 109  Q
    |||||||||||||| ||| ||||||| |  || ||| |||||| |||||||||| ||||| ||||||||||||| ||||||    
T  41002348 aaaattaacctccagaaccctctccttccgatgtct-ctatttcttccacttgctccttcattttttccaaaaccctcccc 41002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 23550773 - 23550695
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctccc 108  Q
    |||||||||| ||||| | ||| ||||| |||||| | ||||| ||| |||| | |||||||||||||||||||||||||    
T  23550773 aaaattaacccccaaacc-ctcccctcccaatatcctatatttcttctactttctccttccttttttccaaaactctccc 23550695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 25335288 - 25335236
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttg 81  Q
    |||||||||||||||||| ||||| ||| ||||| |||||||| || ||||||    
T  25335288 aaaattaacctccaaaaccctctcatcctaatatattctatttattgcacttg 25335236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 7e-26; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 12964069 - 12964177
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctc-ccatccctccaaaatc 127  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||| ||  |||||| || ||    
T  12964069 aaaattaacctccaaagctctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctctcctcccctcccaactc 12964168  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  12964169 ccaaacaaa 12964177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 30312502 - 30312605
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||||| ||||||||| ||| | |||||||| |||||||||| ||||||||||||||||||| ||||||||    ||||||||| |||    
T  30312502 aaaattaacctccaaaaccctctcctcccaatgtgttctatttcttccacttgctccttccttttttccaaaaccctcccctc----ccctccaaactcc 30312597  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  30312598 caaacaaa 30312605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 10165399 - 10165291
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc-catccctccaaaatc 127  Q
    ||||||||||| |||||| ||||||||| ||| |||||||||||||||||||||  |||||||||| ||||||||||||| ||| |  ||||||||| ||    
T  10165399 aaaattaaccttcaaaaccctctcctcccaatgtcttctattttttccacttgcttcttcctttttaccaaaactctcccttcctctcccctccaaactc 10165300  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  10165299 ccaaacaaa 10165291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 18018693 - 18018801
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||||| ||||||||| ||| |||||||||| || |||||||  |||||||||||||||||| |||||||||| | ||||| ||| ||    
T  18018693 aaaattaacctccaaaaccctctcctcccaatgtcttctatttctttcacttgcttcttccttttttccaaaaccctcccctcccctcccctcgaaactc 18018792  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  18018793 ccaaacaaa 18018801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 4041948 - 4041865
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||| || ||||| ||||||||||||| |||||||||    
T  4041948 aaaattaacctccaaaaccctctcctcccaatatcttctatttcttccactcgctccttctttttttccaaaaccctcccctcc 4041865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 18780368 - 18780258
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatat--cttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaa 125  Q
    |||||||||||||||| | ||||||||| |||||  ||||||||| |||||| ||| ||||||||||||||||||| |||||||||| | |||||||||     
T  18780368 aaaattaacctccaaagccctctcctcccaatatgtcttctatttcttccacgtgctccttccttttttccaaaaccctcccctcccctcccctccaaac 18780269  T
Q  126 tcccaaacaaa 136  Q
    |||||||||||    
T  18780268 tcccaaacaaa 18780258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 44137136 - 44137033
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| ||||| |||| ||||||||||||||||||| ||||||||    ||||||||| |||    
T  44137136 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccatttgctccttccttttttccaaaaccctcccctc----ccctccaaactcc 44137041  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  44137040 caaacaaa 44137033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 3039045 - 3039153
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc-catccctccaaaatc 127  Q
    ||||||||||| |||| | ||||||||| ||| ||||||||||||||||||||| |||||||||||| |||||| ||| ||||| |  ||||||||| ||    
T  3039045 aaaattaaccttcaaagccctctcctcccaatgtcttctattttttccacttgctccttcctttttttcaaaaccctctcctcctctcccctccaaactc 3039144  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  3039145 ccaaacaaa 3039153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 31550346 - 31550454
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatcc-ctccaaaatc 127  Q
    |||||||||||| ||| | |||| ||||||   |||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||| ||||||| ||    
T  31550346 aaaattaacctcaaaagccctcttctccaatcgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccactccaaactc 31550445  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  31550446 ccaaacaaa 31550454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 18826329 - 18826412
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||| ||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  18826329 aaaattaacctccaaagccctctcttcctaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 18826412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 36567375 - 36567457
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||||| ||||||| | ||| |||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  36567375 aaaattaacctccaaaaccctctccttccaatgtcttctatttcttccacttgctcctt-cttttttccaaaactctcccctcc 36567457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 8555873 - 8555954
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccct 110  Q
    |||||||||||||||||| |||| |||| ||| |||||||||| |||||||||| ||||||||||||| ||||| |||||||    
T  8555873 aaaattaacctccaaaaccctcttctcccaatgtcttctatttcttccacttgctccttccttttttcaaaaaccctcccct 8555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 1725894 - 1725804
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctt-ttttccaaaactctcccctcccatccc 118  Q
    |||||||||||||||||| | ||||||| ||| | |||||||| |||||||||| |||||||| ||||||||||| |||||||||| ||||    
T  1725894 aaaattaacctccaaaaccccctcctcccaatgttttctatttcttccacttgctccttcctttttttccaaaaccctcccctcccctccc 1725804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 3119947 - 3120055
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc-catccctccaaaatc 127  Q
    ||||||||||||||||||  |||||||  ||| |||||||||| |||| ||||| | ||| ||||||||||||| ||||||||| |  ||||||||||||    
T  3119947 aaaattaacctccaaaaccatctcctcgcaatgtcttctatttcttccccttgctcattctttttttccaaaaccctcccctcctctcccctccaaaatc 3120046  T
Q  128 ccaaacaaa 136  Q
     ||||||||    
T  3120047 tcaaacaaa 3120055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 32243459 - 32243375
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| ||||  |||| |||||| ||||| |||||| ||||||||||    
T  32243459 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttcccattgctccttccattttttcaaaaccctcccctccc 32243375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 38293850 - 38293765
Alignment:
Q  47 tctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcccaaacaaa 136  Q
    |||| ||||| ||| |||||||||| |||||||||| | ||||||||||||||||| ||||||||    ||||||||| |||||||||||    
T  38293850 tctcccctcccaatgtcttctatttcttccacttgctcattccttttttccaaaaccctcccctc----ccctccaaactcccaaacaaa 38293765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 8411027 - 8411131
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttc-cttttttccaaaactctcccctcccatccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| ||||||||||  || |||||| |||||  ||||||||||||| ||||||||    ||||||||| ||    
T  8411027 aaaattaacctccaaagccctctcctcccaatgtcttctatttcctcaacttgctccttcatttttttccaaaaccctcccctc----ccctccaaactc 8411122  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  8411123 ccaaacaaa 8411131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 38023542 - 38023625
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||||| |||||||   ||| |||||||||| ||| |||||| ||||| ||||||||||||  |||||||||    
T  38023542 aaaattaacctccaaaaccctctcctttcaatgtcttctatttcttctacttgctccttcattttttccaaaatcctcccctcc 38023625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 8991060 - 8991166
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| |  |||||| | ||| |||||||||| |||||||| |  |||  ||||||||||||| |||||||||| | ||||||||| ||    
T  8991060 aaaattaacctccaaagccatctccttccaatgtcttctatttcttccacttccttctt--ttttttccaaaaccctcccctcccctcccctccaaactc 8991157  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  8991158 ccaaacaaa 8991166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 14008424 - 14008529
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttc-cttttttccaaaactctcccctcccat-ccctccaaaat 126  Q
    |||||||||||||||| |  |||| ||| ||| |||||||||| |||||||| | |||||  ||||||||||||| |||||||||| | ||||||||| |    
T  14008424 aaaattaacctccaaagccatctcatcccaatgtcttctatttcttccacttactccttcttttttttccaaaaccctcccctcccttcccctccaaact 14008523  T
Q  127 cccaaa 132  Q
    ||||||    
T  14008524 cccaaa 14008529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 25960707 - 25960780
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaac 102  Q
    |||||||||||||||| | |||||||   ||| |||||||||| |||||||||| |||| ||||||||||||||    
T  25960707 aaaattaacctccaaagccctctcctttcaatgtcttctatttcttccacttgctcctttcttttttccaaaac 25960780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 16519221 - 16519293
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||| | | ||||||||| || ||||||||    
T  16519221 tctatttcttccacttgctccttccttttttccaaaaccctcccctctcttcccctccaaactcgcaaacaaa 16519293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 16625914 - 16625986
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    ||||||| |||||||||| || |||||||||||||||| |||||||||| | ||||||||| || ||||||||    
T  16625914 tctatttcttccacttgctccatccttttttccaaaaccctcccctcccttcccctccaaactcgcaaacaaa 16625986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 725939 - 725855
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||| ||| | ||||||| | ||| |||||||||| |||||||| |   |||||||||| |||||| ||||||||||    
T  725939 aaaattaacctctaaagccctctccttccaatttcttctatttcttccacttacttattcctttttttcaaaaccctcccctccc 725855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 4003376 - 4003304
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcccatcc-ctccaaaatcccaaacaaa 136  Q
    ||||||| |||||||||| | ||||||||||||||| | |||||||||| ||| ||||||| || ||||||||    
T  4003376 tctatttcttccacttgctcattccttttttccaaagccctcccctcccttccactccaaactcacaaacaaa 4003304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 5322215 - 5322298
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||| |||| ||||| ||||| ||||| ||| || ||||| ||||||||| || | |||||||||||||||||  ||||||||    
T  5322215 aaaatgaacccccaaagctctcccctcccaatgtcctctatcttttccactagctctttccttttttccaaaaccttcccctcc 5322298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 13766035 - 13766118
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||| ||| | |||| || | ||| |||||||||| ||||||| || |||||| ||||||||| || |||||||||    
T  13766035 aaaattaacctctaaagccctcttctaccaatgtcttctatttcttccactcgctccttccatttttccaataccctcccctcc 13766118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 44020338 - 44020253
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctt--ttttccaaaactctcccctcc 112  Q
    ||||||||||||  |||| ||||||| | ||| |||||||||| |||||||||| | ||||||  ||||||||||  |||||||||    
T  44020338 aaaattaacctctcaaaccctctccttccaatgtcttctatttcttccacttgctcattcctttcttttccaaaatcctcccctcc 44020253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 19382862 - 19382798
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctttt 93  Q
    ||||||||||| |||| | || |||||  ||| |||||||||| |||||||||| ||||||||||    
T  19382862 aaaattaacctacaaagccctttcctctcaatgtcttctatttcttccacttgctccttcctttt 19382798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 39181027 - 39180956
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcccatcc-ctccaaaatcccaaacaaa 136  Q
    ||||||| |||||||| | ||||||||||||||||| | |||||||||| ||| ||||||| || ||||||||    
T  39181027 tctatttcttccacttactccttccttttttccaaatc-ctcccctcccttcctctccaaactcgcaaacaaa 39180956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 41962072 - 41962155
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  41962072 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 41962155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 43007593 - 43007676
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||||||| |||||||||||||| ||||||||||  |||||||||||||||||| |||||||||    
T  43007593 aaaattaacctccaaagccctctcctcccaatatcttctatttcttccacttgctacttccttttttccaaaaccctcccctcc 43007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 34306131 - 34306023
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat--ccctccaaaat 126  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||| ||||||||||| |||||||||| |  ||||||||| |    
T  34306131 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcct-ttttccaaaaccctcccctcccctccccctccaaact 34306033  T
Q  127 cccaaacaaa 136  Q
    ||||||||||    
T  34306032 cccaaacaaa 34306023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 47789546 - 47789651
Alignment:
Q  32 attaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatccca 130  Q
    ||||||||||||| ||||||||||  ||| |||||||||| |||||||||| ||||||||||||| | ||| |||||||||| | ||||||||| |||||    
T  47789546 attaacctccaaagctctctcctctcaatgtcttctatttcttccacttgctccttccttttttctacaaccctcccctcccttcccctccaaactccca 47789645  T
Q  131 aacaaa 136  Q
    ||||||    
T  47789646 aacaaa 47789651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 30131983 - 30132090
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatc 127  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| |||||||||||| | |||| |||||||||| | ||||||||| ||    
T  30131983 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcctttttt-cgaaaccctcccctcccctcccctccaaattc 30132081  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  30132082 ccaaacaaa 30132090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 43237275 - 43237192
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||| ||||| |||||||||    
T  43237275 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttttctaaaaccctcccctcc 43237192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 49683098 - 49683181
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| | ||||||||| ||| ||||||||||||||||||||| | ||||||||||| ||||| |||||||||    
T  49683098 aaaattaacctccaaagccctctcctcctaatgtcttctattttttccacttgctcattccttttttctaaaaccctcccctcc 49683181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 46312518 - 46312621
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| ||||||||   ||||||||||||||||||| ||||||||    ||||||||| |||    
T  46312518 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttagtccttccttttttccaaaaccctcccctc----ccctccaaactcc 46312613  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  46312614 caaacaaa 46312621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 17642574 - 17642485
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    |||||||||||||||||| ||||  ||| ||| |||||||||| ||||||||||  |||||||||||||||||| |||||||||| ||||    
T  17642574 aaaattaacctccaaaaccctcttttcccaatgtcttctatttcttccacttgcttcttccttttttccaaaaccctcccctcccctccc 17642485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 47714769 - 47714858
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    |||||||||||||||| | ||||||| | ||| |||||||||| |||||||||| |||||||||||||  ||||||||||||||| ||||    
T  47714769 aaaattaacctccaaagccctctccttccaatgtcttctatttcttccacttgctccttccttttttctcaaactctcccctcccctccc 47714858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 38526137 - 38526053
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||| | ||||||| | ||| |||||||||| |||||||| |  |||||||||||||||||||||||||||||    
T  38526137 aaaattaacctccaaagccctctccttccaatgtcttctatttcttccacttacttcttccttttttccaaaactctcccctccc 38526053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 3043215 - 3043298
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||||||||   ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||  |||||||||    
T  3043215 aaaattaacctccaaaggcctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaatcctcccctcc 3043298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 24242189 - 24242272
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||||||||   ||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||  |||||||||    
T  24242189 aaaattaacctccaaagtcctctcctcccaatatcttctatttcttccacttgctccttccttttttctaaaatcctcccctcc 24242272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 33982816 - 33982899
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||||||||   ||||||||| ||| |||||||||| |||||||||| |||||||||||| |||||| |||||||||    
T  33982816 aaaattaacctccaaagtcctctcctcccaatgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 33982899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 42583368 - 42583471
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||||| ||||| |   ||| |||||||||| |||||||||| | ||||||||||||||||| ||||||||    ||||||||| |||    
T  42583368 aaaattaacctccaaaaccctctcatttcaatgtcttctatttcttccacttgctcattccttttttccaaaaccctcccctc----ccctccaaactcc 42583463  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  42583464 caaacaaa 42583471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 49860820 - 49860738
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctc 111  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| ||||| |||| ||||||||||||||||||| || |||||    
T  49860820 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccaattgctccttccttttttccaaaacccttccctc 49860738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 36796388 - 36796324
Alignment:
Q  48 ctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  36796388 ctctcctcccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 36796324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 31178343 - 31178450
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||| | ||| |||||||||| ||||| || |  |||| |||||| |||||| |||||||||| | |||||||| |||    
T  31178343 aaaattaacctccaaagccctctccttccaatgtcttctatttcttccatttacttcttcatttttttcaaaaccctcccctccctttcctccaaactcc 31178442  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  31178443 caaacaaa 31178450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 38515234 - 38515152
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||| ||||| | ||||||||| |||||||||||||| || ||||||| ||||||||||| ||||||| |||||||||    
T  38515234 aaaattaacc-ccaaagccctctcctcccaatatcttctatttctttcacttgctccttcctttttaccaaaaccctcccctcc 38515152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 44412251 - 44412355
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcct-tttttccaaaactctcccctcccatccctccaaaatc 127  Q
    |||||||||||||||||| ||||||| | ||| |||||||||| |||||||||| ||||||| ||||| |||||| || |||||    ||||||||| ||    
T  44412251 aaaattaacctccaaaaccctctccttccaatgtcttctatttcttccacttgctccttcctattttttcaaaacccttccctc----ccctccaaactc 44412346  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  44412347 ccaaacaaa 44412355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 55439568 - 55439485
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||||||||   ||||||||| ||| || ||||||| |||||||||| | ||||||||||||||||| |||||||||    
T  55439568 aaaattaacctccaaagtcctctcctcccaatgtcctctatttcttccacttgctcattccttttttccaaaaccctcccctcc 55439485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 25428654 - 25428571
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||| ||||||| | ||||||||  |||||||||||||| |||||||| |  ||| |||||||||||||| |||||||||    
T  25428654 aaaattaatctccaaagcgctctcctctcaatatcttctatttcttccacttacttctttcttttttccaaaaccctcccctcc 25428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 23163508 - 23163443
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttt 94  Q
    |||||||||||||||| | |||||||||  || |||||||||| |||||||||| |||||||||||    
T  23163508 aaaattaacctccaaagccctctcctcctgatgtcttctatttcttccacttgctccttccttttt 23163443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 39499182 - 39499071
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctat---tttttccacttgccccttccttttttccaaaactctcccctcccatccc-tccaaa 124  Q
    |||||||||||||||| | ||||||||| ||||||||||||   || |||||||||| ||||||||||||  |||||  | ||||||  |||| ||||||    
T  39499182 aaaattaacctccaaagccctctcctcccaatatcttctatatcttcttccacttgctccttcctttttttaaaaacctttccctcctctcccttccaaa 39499083  T
Q  125 atcccaaacaaa 136  Q
     |||||||||||    
T  39499082 ctcccaaacaaa 39499071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 45555617 - 45555513
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcc-ttttttccaaaactctcccctcccatccctccaaaatc 127  Q
    |||||||||||||||| | || || |||  || |||||||||| |||||||||| |||||| ||||||||||||| ||||| ||    ||||||||| ||    
T  45555617 aaaattaacctccaaagccctgtcttcccgatgtcttctatttcttccacttgctccttccattttttccaaaaccctcccatc----ccctccaaactc 45555522  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  45555521 ccaaacaaa 45555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 46017212 - 46017104
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccct-cccatccctccaaaatc 127  Q
    ||||||||||||||||    |||||||| ||| ||||| |||| || ||||| | ||||| ||||||||||||  || |||| ||| |||||||||| ||    
T  46017212 aaaattaacctccaaagtcttctcctcccaatgtcttccatttctttcacttactccttctttttttccaaaatccttccctccccttccctccaaactc 46017113  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  46017112 ccaaacaaa 46017104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 2420605 - 2420541
Alignment:
Q  73 ttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    |||||||||| |||||||||||| |||||| |||||||||  | ||||| ||| |||||||||||    
T  2420605 ttccacttgctccttcctttttttcaaaaccctcccctccattcccctctaaactcccaaacaaa 2420541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 30995855 - 30995787
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttcc 97  Q
    ||||||||||||| |||| ||   |||| |||||||||||||| ||||| |||  ||||||||||||||    
T  30995855 aaaattaacctcccaaacccttctctcccaatatcttctatttcttccatttgttccttccttttttcc 30995787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 53620237 - 53620165
Alignment:
Q  65 tctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    ||||||| | |||||||| ||||||||||||||||| | ||| |||||| | ||||||||| || ||||||||    
T  53620237 tctatttctcccacttgctccttccttttttccaaagccctcacctcccttcccctccaaactcgcaaacaaa 53620165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 35551 - 35659
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatcc-ctccaaaatc 127  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||| || ||||||| ||||||||||||||||||| |||||||| | ||| |||||||  |    
T  35551 aaaattaacctccaaagctctctcttcccaatgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcgcctcctctccaaacac 35650  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  35651 ccaaacaaa 35659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 24734866 - 24734763
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccctccaaaatcc 128  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||| ||||| ||    ||||||||| |||    
T  24734866 aaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctcgttccttttttccaaaaccctcccttc----ccctccaaactcc 24734771  T
Q  129 caaacaaa 136  Q
    ||||||||    
T  24734770 caaacaaa 24734763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 29241930 - 29242013
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||| |||||||| | ||||||||| ||| |||||||||| ||||| |||| ||||||||||||||||||| |||||||||    
T  29241930 aaaattatcctccaaagccctctcctcccaatgtcttctatttcttccatttgctccttccttttttccaaaaccctcccctcc 29242013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 1029277 - 1029198
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctccc 108  Q
    ||||||| |||||||| | ||||||| | ||| |||||||||| |||||||||| ||||||||||||||||||| |||||    
T  1029277 aaaattatcctccaaagccctctccttccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctccc 1029198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 2365727 - 2365802
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    |||||||||| |||||||||| |||||||||||| |||||| |||||||||| | ||||||||| |||||||||||    
T  2365727 tcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaacaaa 2365802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 5825317 - 5825234
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||||||| |||| |  |||||||| ||| |||||||||| || ||||||| ||||||||||||||||||| |||||||||    
T  5825317 aaaattaaccttcaaagccttctcctcccaatgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcc 5825234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 26574512 - 26574576
Alignment:
Q  49 tctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||| | ||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  26574512 tctccttccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctccc 26574576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 26481257 - 26481332
Alignment:
Q  62 tcttctattttttccacttgccccttccttttttccaaaactctcccctcccat-ccctccaaaatcccaaacaaa 136  Q
    |||||||||| ||||||||||  ||||||||||| |||||| |||||||||| | ||||||||| |||||||||||    
T  26481257 tcttctatttcttccacttgctacttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaacaaa 26481332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 31345486 - 31345575
Alignment:
Q  48 ctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctc-ccatccctccaaaatcccaaacaaa 136  Q
    ||||||||| ||  |||||||||||||||||| || |||||||||||| |||||  |||||||| ||  ||||||||| |||||||||||    
T  31345486 ctctcctcccaacgtcttctattttttccactcgcaccttcctttttttcaaaaacctcccctcacctcccctccaaactcccaaacaaa 31345575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 4910012 - 4910094
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    |||||||||||||||| ||||| ||||| ||| |||||| ||| |||||||||| |||||| | ||| |||||| |||||||||    
T  4910012 aaaattaacctccaaagctctcccctcccaatgtcttctgtttcttccacttgctccttccatcttt-caaaaccctcccctcc 4910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 34914611 - 34914503
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccc-tcccatccctccaaaatc 127  Q
    |||||||||||||||| | ||||||| | |||  || |||||| |||||||| |  || ||||||||||||||| |||||| ||||  ||||| ||| ||    
T  34914611 aaaattaacctccaaagccctctccttccaatgcctactatttcttccacttacttctcccttttttccaaaaccctccccttccctcccctcaaaactc 34914512  T
Q  128 ccaaacaaa 136  Q
    |||||||||    
T  34914511 ccaaacaaa 34914503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 14275970 - 14275904
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttcctttttt 95  Q
    ||||||||||| || | | ||||||||| ||| |||||||||| |||||||||| | ||||||||||    
T  14275970 aaaattaaccttcatagccctctcctcccaatgtcttctatttcttccacttgctcattcctttttt 14275904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 3769 - 3852
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcc 112  Q
    ||||||| |||||||| |  | |||||||||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  3769 aaaattatcctccaaagccttatcctccaaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 3852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 107776 - 107859
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    ||||||||||||||||| |||||| ||| |||||||||||||| ||| |||| | |||||||||||||| |||| ||||||||||    
T  107776 aaaattaacctccaaaattctctcttcccaatatcttctatttcttcaacttactccttccttttttcc-aaaccctcccctccc 107859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 75986 - 75903
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    ||||||||||||||||| |||||| ||  |||||||||||||| ||| |||| | ||||||||||||||||| | ||||||||||    
T  75986 aaaattaacctccaaaattctctcttctcaatatcttctatttcttcaacttactccttccttttttccaaatc-ctcccctccc 75903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 67881 - 67798
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctccc 113  Q
    |||||||||||||||||  ||||| ||  |||||||||||||| ||| |||| | ||||||||||||||||| | ||||||||||    
T  67881 aaaattaacctccaaaatcctctcttcacaatatcttctatttcttcaacttactccttccttttttccaaatc-ctcccctccc 67798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 122 - 33
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    |||||||||||||||| |  ||| |||| ||| | |||||||| |||||||||| ||||| ||||||| ||||| ||||| |||| ||||    
T  122 aaaattaacctccaaagccttcttctcccaatgttttctatttcttccacttgctccttctttttttctaaaaccctcccttcccctccc 33  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 2471 - 2560
Alignment:
Q  29 aaaattaacctccaaaactctctcctccaaatatcttctattttttccacttgccccttccttttttccaaaactctcccctcccatccc 118  Q
    |||||||||||||||| |  ||| |||| ||| | |||||||| |||||||||| ||||| ||||||| ||||| ||||| |||| ||||    
T  2471 aaaattaacctccaaagccttcttctcccaatgttttctatttcttccacttgctccttctttttttctaaaaccctcccttcccctccc 2560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 4085 - 4032
Alignment:
Q  79 ttgccccttccttttttccaaaactctcccctcccatccctccaaaatcccaaacaaa 136  Q
    |||| |||||||| |||||||||||||||||||    ||||||||| |||||||||||    
T  4085 ttgctccttccttgtttccaaaactctcccctc----ccctccaaactcccaaacaaa 4032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 4416 - 4363
Alignment:
Q  79 ttgccccttccttttttccaaaactctcccctcccatccctccaaaatcccaaacaaa 136  Q
    |||| |||||||| |||||||||||||||||||    ||||||||| |||||||||||    
T  4416 ttgctccttccttgtttccaaaactctcccctc----ccctccaaactcccaaacaaa 4363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 2766 times since January 2019
Visitors: 3829