View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0622_low_5 (Length: 940)

Name: NF0622_low_5
Description: NF0622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0622_low_5
NF0622_low_5
[»] chr1 (54 HSPs)
chr1 (659-838)||(15375024-15375206)
chr1 (365-539)||(15374746-15374919)
chr1 (29-133)||(24422799-24422903)
chr1 (40-133)||(11437208-11437301)
chr1 (26-132)||(51684366-51684472)
chr1 (29-129)||(24426073-24426173)
chr1 (29-133)||(52274967-52275071)
chr1 (29-132)||(39699765-39699867)
chr1 (26-133)||(11436041-11436148)
chr1 (29-132)||(41364829-41364931)
chr1 (26-133)||(51685760-51685867)
chr1 (26-132)||(45148581-45148686)
chr1 (28-133)||(23980463-23980568)
chr1 (29-133)||(35067000-35067104)
chr1 (29-133)||(52827346-52827450)
chr1 (26-129)||(37526873-37526975)
chr1 (26-129)||(45149965-45150068)
chr1 (29-129)||(52828068-52828168)
chr1 (272-335)||(15373868-15373931)
chr1 (37-132)||(36613910-36614005)
chr1 (26-129)||(39153111-39153214)
chr1 (26-132)||(39222468-39222575)
chr1 (29-133)||(12389980-12390083)
chr1 (29-133)||(33088615-33088719)
chr1 (26-133)||(36612852-36612958)
chr1 (26-129)||(43378708-43378810)
chr1 (26-133)||(45157204-45157310)
chr1 (26-129)||(50680335-50680437)
chr1 (55-133)||(14999284-14999361)
chr1 (52-133)||(39698562-39698643)
chr1 (37-133)||(44404441-44404537)
chr1 (29-129)||(52276161-52276261)
chr1 (26-133)||(7675454-7675560)
chr1 (26-133)||(35594216-35594321)
chr1 (26-129)||(43058789-43058891)
chr1 (55-133)||(11190384-11190462)
chr1 (388-477)||(2129343-2129431)
chr1 (29-129)||(7983053-7983152)
chr1 (29-133)||(41366129-41366232)
chr1 (26-129)||(39151934-39152037)
chr1 (38-133)||(43060013-43060108)
chr1 (55-133)||(7674527-7674603)
chr1 (54-132)||(50681627-50681705)
chr1 (26-133)||(35595187-35595295)
chr1 (59-133)||(14999983-15000057)
chr1 (56-133)||(16290092-16290170)
chr1 (26-104)||(25652742-25652820)
chr1 (26-129)||(40384727-40384831)
chr1 (56-95)||(44411991-44412030)
chr1 (298-332)||(2129470-2129504)
chr1 (273-323)||(2129521-2129571)
chr1 (23-132)||(46066525-46066631)
chr1 (605-638)||(15374986-15375019)
chr1 (29-94)||(46524578-46524642)
[»] chr5 (36 HSPs)
chr5 (26-133)||(19752911-19753017)
chr5 (26-133)||(19754125-19754233)
chr5 (26-133)||(25523068-25523175)
chr5 (26-133)||(18486897-18487004)
chr5 (29-133)||(40255670-40255774)
chr5 (29-133)||(5778834-5778938)
chr5 (29-133)||(28538675-28538779)
chr5 (50-132)||(22940641-22940723)
chr5 (26-133)||(16650850-16650957)
chr5 (26-133)||(25055411-25055518)
chr5 (29-133)||(5777900-5778002)
chr5 (36-129)||(20216768-20216861)
chr5 (36-133)||(33160291-33160388)
chr5 (29-133)||(36486486-36486590)
chr5 (26-129)||(24332916-24333019)
chr5 (32-132)||(25056382-25056482)
chr5 (26-129)||(42195137-42195238)
chr5 (26-108)||(2686396-2686478)
chr5 (50-132)||(20214196-20214277)
chr5 (29-129)||(28539818-28539917)
chr5 (55-132)||(1796054-1796131)
chr5 (37-133)||(7311589-7311685)
chr5 (29-133)||(18154493-18154595)
chr5 (26-133)||(18485137-18485251)
chr5 (47-133)||(25524143-25524230)
chr5 (50-133)||(33158097-33158180)
chr5 (57-133)||(5730440-5730517)
chr5 (26-91)||(25524093-25524158)
chr5 (29-130)||(36485302-36485403)
chr5 (38-132)||(5962579-5962671)
chr5 (56-129)||(2685749-2685820)
chr5 (29-109)||(1797295-1797375)
chr5 (26-82)||(16650042-16650098)
chr5 (29-133)||(21835040-21835143)
chr5 (26-133)||(42196195-42196302)
chr5 (58-108)||(34893689-34893739)
[»] chr2 (41 HSPs)
chr2 (31-133)||(7899882-7899984)
chr2 (29-133)||(22848190-22848294)
chr2 (29-133)||(38840491-38840595)
chr2 (29-133)||(38839241-38839345)
chr2 (26-133)||(23869530-23869636)
chr2 (49-133)||(36449777-36449861)
chr2 (26-132)||(18299373-18299479)
chr2 (29-129)||(7898694-7898794)
chr2 (29-133)||(11258809-11258913)
chr2 (26-133)||(18904366-18904473)
chr2 (26-133)||(22587949-22588055)
chr2 (49-129)||(36450939-36451018)
chr2 (29-132)||(41878092-41878197)
chr2 (29-133)||(41879210-41879314)
chr2 (37-132)||(1034475-1034570)
chr2 (50-133)||(18906006-18906089)
chr2 (38-131)||(13030293-13030383)
chr2 (26-131)||(18300720-18300822)
chr2 (55-133)||(18868923-18869001)
chr2 (29-133)||(11257621-11257724)
chr2 (26-133)||(18797245-18797353)
chr2 (38-133)||(11938796-11938890)
chr2 (55-129)||(13567975-13568049)
chr2 (610-719)||(17906192-17906302)
chr2 (26-108)||(22587525-22587606)
chr2 (26-108)||(28617946-28618027)
chr2 (38-108)||(24475248-24475318)
chr2 (28-133)||(802588-802692)
chr2 (388-459)||(10928068-10928137)
chr2 (49-133)||(13570575-13570659)
chr2 (50-132)||(24476863-24476943)
chr2 (49-108)||(32739647-32739706)
chr2 (29-131)||(1033212-1033312)
chr2 (55-133)||(16446153-16446231)
chr2 (26-131)||(26545516-26545621)
chr2 (29-133)||(1093144-1093247)
chr2 (388-468)||(40140342-40140422)
chr2 (75-133)||(21837299-21837355)
chr2 (28-104)||(810778-810854)
chr2 (282-334)||(10928182-10928234)
chr2 (29-129)||(8535654-8535752)
[»] chr4 (46 HSPs)
chr4 (29-133)||(52491605-52491709)
chr4 (26-133)||(1290193-1290300)
chr4 (29-132)||(10471386-10471489)
chr4 (29-129)||(8758835-8758935)
chr4 (29-133)||(25685820-25685924)
chr4 (35-133)||(49308032-49308128)
chr4 (29-130)||(19750573-19750673)
chr4 (29-130)||(19789133-19789233)
chr4 (29-133)||(1963195-1963299)
chr4 (26-129)||(12129626-12129729)
chr4 (35-133)||(17388215-17388312)
chr4 (26-129)||(8155741-8155843)
chr4 (29-133)||(8757674-8757777)
chr4 (29-133)||(10470545-10470649)
chr4 (49-133)||(17382992-17383075)
chr4 (29-133)||(31599788-31599892)
chr4 (29-129)||(35935531-35935631)
chr4 (29-133)||(48780247-48780351)
chr4 (26-133)||(1835097-1835204)
chr4 (29-132)||(25684934-25685037)
chr4 (28-133)||(3928855-3928960)
chr4 (29-129)||(35934347-35934445)
chr4 (29-133)||(5526124-5526227)
chr4 (36-132)||(31600990-31601086)
chr4 (29-133)||(48781044-48781147)
chr4 (36-133)||(26421627-26421723)
chr4 (29-133)||(5525359-5525462)
chr4 (26-132)||(1834119-1834226)
chr4 (26-132)||(10447006-10447113)
chr4 (29-133)||(13386013-13386119)
chr4 (29-133)||(13386530-13386635)
chr4 (18-133)||(13509346-13509460)
chr4 (37-132)||(33310095-33310187)
chr4 (26-122)||(21539066-21539162)
chr4 (49-129)||(55603549-55603628)
chr4 (26-129)||(1289100-1289203)
chr4 (26-133)||(10448255-10448362)
chr4 (54-132)||(1964464-1964542)
chr4 (36-133)||(3927665-3927762)
chr4 (36-133)||(21177996-21178092)
chr4 (56-129)||(55602379-55602451)
chr4 (30-133)||(14868889-14868990)
chr4 (30-133)||(14876944-14877045)
chr4 (274-335)||(8194012-8194072)
chr4 (29-109)||(46638723-46638803)
chr4 (55-133)||(49306774-49306851)
[»] chr3 (55 HSPs)
chr3 (26-133)||(12700174-12700279)
chr3 (29-133)||(54540788-54540892)
chr3 (29-131)||(8456479-8456580)
chr3 (29-129)||(7267647-7267746)
chr3 (29-133)||(29931225-29931329)
chr3 (29-133)||(29980379-29980483)
chr3 (26-133)||(12703495-12703601)
chr3 (26-133)||(7758401-7758508)
chr3 (29-133)||(29932697-29932800)
chr3 (29-133)||(29981851-29981954)
chr3 (29-129)||(47610578-47610678)
chr3 (38-133)||(54539754-54539849)
chr3 (26-132)||(47614185-47614291)
chr3 (28-133)||(22776809-22776914)
chr3 (26-133)||(19984848-19984955)
chr3 (37-133)||(534498-534594)
chr3 (29-129)||(7268825-7268924)
chr3 (29-133)||(28262192-28262295)
chr3 (29-133)||(28263109-28263213)
chr3 (29-133)||(47609696-47609800)
chr3 (29-133)||(52276303-52276407)
chr3 (29-133)||(52281545-52281649)
chr3 (29-132)||(51469972-51470075)
chr3 (29-132)||(52840602-52840705)
chr3 (50-133)||(55192014-55192096)
chr3 (29-133)||(18442629-18442734)
chr3 (29-133)||(19487703-19487808)
chr3 (38-129)||(40426785-40426877)
chr3 (49-133)||(53614818-53614902)
chr3 (30-133)||(5029682-5029784)
chr3 (26-133)||(11671336-11671442)
chr3 (38-133)||(24516459-24516554)
chr3 (31-132)||(18456063-18456165)
chr3 (26-133)||(19986065-19986174)
chr3 (75-133)||(47615592-47615650)
chr3 (36-132)||(535787-535883)
chr3 (29-133)||(51470453-51470556)
chr3 (26-129)||(23770402-23770505)
chr3 (29-132)||(51037536-51037638)
chr3 (28-133)||(46721217-46721322)
chr3 (57-133)||(5001199-5001275)
chr3 (37-133)||(8875905-8876001)
chr3 (36-132)||(46719941-46720037)
chr3 (54-133)||(51038813-51038892)
chr3 (38-129)||(34019152-34019241)
chr3 (26-129)||(54987002-54987103)
chr3 (26-105)||(31645000-31645079)
chr3 (38-132)||(49216247-49216341)
chr3 (47-132)||(53901404-53901487)
chr3 (56-108)||(6170296-6170348)
chr3 (56-108)||(6249633-6249685)
chr3 (29-133)||(52839036-52839140)
chr3 (50-133)||(23769856-23769939)
chr3 (40-129)||(52104484-52104569)
chr3 (40-129)||(51347271-51347360)
[»] chr8 (53 HSPs)
chr8 (29-133)||(12353359-12353461)
chr8 (26-133)||(10007758-10007865)
chr8 (36-131)||(18979125-18979220)
chr8 (37-127)||(1824084-1824174)
chr8 (37-127)||(1858529-1858619)
chr8 (26-132)||(10006344-10006450)
chr8 (29-129)||(29968335-29968434)
chr8 (29-133)||(12351920-12352024)
chr8 (26-133)||(5513981-5514087)
chr8 (29-133)||(38980042-38980146)
chr8 (29-133)||(39011139-39011243)
chr8 (26-133)||(22221359-22221466)
chr8 (26-133)||(22227701-22227808)
chr8 (29-132)||(38974795-38974898)
chr8 (29-132)||(39005893-39005996)
chr8 (29-123)||(18978029-18978122)
chr8 (26-132)||(22220388-22220494)
chr8 (26-133)||(30335638-30335745)
chr8 (26-133)||(43661818-43661925)
chr8 (36-133)||(1823551-1823648)
chr8 (36-133)||(1857996-1858093)
chr8 (28-133)||(32968455-32968560)
chr8 (40-129)||(40471156-40471244)
chr8 (30-133)||(8388463-8388564)
chr8 (29-129)||(11282011-11282111)
chr8 (26-133)||(32207320-32207425)
chr8 (26-130)||(43661267-43661371)
chr8 (35-129)||(8389693-8389787)
chr8 (28-132)||(32973933-32974037)
chr8 (29-108)||(24488678-24488756)
chr8 (47-129)||(11287779-11287861)
chr8 (29-123)||(18970920-18971013)
chr8 (52-133)||(45114537-45114618)
chr8 (26-94)||(18488257-18488325)
chr8 (38-133)||(24122882-24122976)
chr8 (26-108)||(24123893-24123975)
chr8 (610-719)||(33892692-33892802)
chr8 (26-62)||(11456679-11456715)
chr8 (605-677)||(14164355-14164427)
chr8 (739-839)||(14164474-14164574)
chr8 (29-132)||(11283207-11283310)
chr8 (37-132)||(30336507-30336602)
chr8 (26-133)||(30568886-30568992)
chr8 (50-133)||(42982676-42982759)
chr8 (74-132)||(24483143-24483201)
chr8 (83-132)||(36249552-36249601)
chr8 (26-130)||(29043400-29043504)
chr8 (36-133)||(5003103-5003198)
chr8 (66-132)||(23170034-23170098)
chr8 (276-335)||(23842731-23842790)
chr8 (55-133)||(5514294-5514371)
chr8 (76-133)||(11456637-11456694)
chr8 (37-74)||(24359865-24359902)
[»] chr6 (36 HSPs)
chr6 (26-133)||(7316289-7316396)
chr6 (29-133)||(8659264-8659368)
chr6 (29-133)||(8821872-8821976)
chr6 (26-132)||(7314880-7314985)
chr6 (26-129)||(1829598-1829701)
chr6 (29-132)||(8822791-8822894)
chr6 (55-133)||(16704521-16704599)
chr6 (29-133)||(10784591-10784696)
chr6 (29-133)||(3721611-3721715)
chr6 (29-133)||(14822359-14822463)
chr6 (29-133)||(27437827-27437931)
chr6 (29-133)||(8660202-8660305)
chr6 (29-129)||(34834577-34834677)
chr6 (30-133)||(27322067-27322169)
chr6 (47-132)||(16703570-16703652)
chr6 (39-133)||(14823583-14823678)
chr6 (56-133)||(6842308-6842385)
chr6 (276-333)||(22536014-22536071)
chr6 (40-108)||(26575063-26575131)
chr6 (57-133)||(3722533-3722609)
chr6 (26-133)||(6840193-6840298)
chr6 (29-133)||(26574618-26574721)
chr6 (721-837)||(28299189-28299305)
chr6 (721-837)||(28512768-28512884)
chr6 (279-329)||(10041174-10041224)
chr6 (57-133)||(27318314-27318389)
chr6 (36-132)||(30495702-30495797)
chr6 (29-133)||(3333024-3333128)
chr6 (51-127)||(29473082-29473158)
chr6 (29-108)||(10785911-10785990)
chr6 (484-539)||(28299032-28299087)
chr6 (484-539)||(28512986-28513041)
chr6 (84-130)||(26717137-26717183)
chr6 (29-107)||(34830927-34831005)
chr6 (290-335)||(2961551-2961596)
chr6 (36-129)||(5658759-5658852)
[»] scaffold0019 (2 HSPs)
scaffold0019 (26-131)||(61454-61559)
scaffold0019 (26-132)||(60090-60196)
[»] chr7 (33 HSPs)
chr7 (29-132)||(31659622-31659726)
chr7 (26-133)||(7500454-7500560)
chr7 (38-132)||(18371424-18371518)
chr7 (29-133)||(3227592-3227696)
chr7 (37-133)||(22630458-22630554)
chr7 (29-133)||(31949800-31949904)
chr7 (26-133)||(7501847-7501954)
chr7 (26-127)||(14999150-14999249)
chr7 (36-133)||(17782558-17782655)
chr7 (29-133)||(127336-127438)
chr7 (26-133)||(21505415-21505520)
chr7 (26-133)||(22629482-22629592)
chr7 (29-133)||(31949321-31949425)
chr7 (26-129)||(42886281-42886384)
chr7 (29-132)||(47525365-47525468)
chr7 (26-104)||(18372452-18372530)
chr7 (29-130)||(17781663-17781764)
chr7 (54-133)||(11658378-11658457)
chr7 (29-131)||(3227109-3227210)
chr7 (29-129)||(128599-128699)
chr7 (29-129)||(11662549-11662649)
chr7 (26-133)||(47369780-47369887)
chr7 (58-133)||(34174010-34174084)
chr7 (58-125)||(47524532-47524599)
chr7 (60-133)||(20163585-20163658)
chr7 (40-133)||(34352795-34352888)
chr7 (55-132)||(48934927-48935004)
chr7 (275-327)||(10024277-10024329)
chr7 (29-133)||(30439356-30439459)
chr7 (53-109)||(43899469-43899525)
chr7 (289-335)||(10024334-10024380)
chr7 (26-64)||(14998048-14998086)
chr7 (76-133)||(15681594-15681651)
[»] scaffold0320 (1 HSPs)
scaffold0320 (26-133)||(19487-19594)
[»] scaffold2034 (2 HSPs)
scaffold2034 (28-132)||(233-337)
scaffold2034 (28-109)||(975-1056)
[»] scaffold0302 (2 HSPs)
scaffold0302 (49-133)||(17469-17553)
scaffold0302 (29-132)||(18774-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (32-133)||(5439-5540)
scaffold0294 (32-133)||(4441-4542)
[»] scaffold0227 (1 HSPs)
scaffold0227 (29-132)||(117-220)
[»] scaffold0003 (1 HSPs)
scaffold0003 (29-133)||(49431-49535)
[»] scaffold0632 (1 HSPs)
scaffold0632 (29-133)||(3306-3409)
[»] scaffold0093 (2 HSPs)
scaffold0093 (29-131)||(2463-2564)
scaffold0093 (29-131)||(7086-7187)
[»] scaffold1303 (1 HSPs)
scaffold1303 (26-133)||(1438-1545)
[»] scaffold0112 (1 HSPs)
scaffold0112 (31-132)||(37148-37248)
[»] scaffold0186 (2 HSPs)
scaffold0186 (29-132)||(23081-23182)
scaffold0186 (29-133)||(23887-23992)
[»] scaffold0059 (2 HSPs)
scaffold0059 (29-131)||(4728-4829)
scaffold0059 (29-108)||(3699-3778)
[»] scaffold0586 (2 HSPs)
scaffold0586 (37-129)||(6346-6438)
scaffold0586 (36-133)||(9032-9127)
[»] scaffold0049 (1 HSPs)
scaffold0049 (29-133)||(7413-7517)
[»] scaffold0045 (1 HSPs)
scaffold0045 (56-132)||(49109-49185)
[»] scaffold0642 (1 HSPs)
scaffold0642 (274-335)||(8341-8401)
[»] scaffold0345 (1 HSPs)
scaffold0345 (274-335)||(18254-18314)
[»] scaffold0105 (1 HSPs)
scaffold0105 (274-335)||(20668-20728)


Alignment Details
Target: chr1 (Bit Score: 141; Significance: 2e-73; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 659 - 838
Target Start/End: Original strand, 15375024 - 15375206
Alignment:
Q  659 cttaagaaaaataggtaaataatcccatcaacaatgtatgtaataacatgaccatgactagtct---tatcagcacaagcttcgaagcctctaatagtcc 755  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||| ||||||||||||||| |||    
T  15375024 cttaagaaaaataggtaaataatcccatcaacaatgtatgttataacatgaccatgactagtctgcttatcagcacaagcatcgaagcctctaatattcc 15375123  T
Q  756 gatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggacttgatagagttcttttttct 838  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15375124 gatagaggaccttcattgagccagaggaataattgcacccttagactgggttttgtaatggacttgatagagttcttttttct 15375206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 365 - 539
Target Start/End: Original strand, 15374746 - 15374919
Alignment:
Q  365 tgacgttagtgactttnnnnnnntgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaaca 464  Q
    ||||||||||||||||       ||||| ||||||||||   || ||||||||||||||| || ||| |||| ||||||||||||||||||||||||| |    
T  15374746 tgacgttagtgactttaaaaaaatgaacattttatgtgcgccctgattcaattccttgcataacttggtttt-cataaaaattaattaggtccgccaaaa 15374844  T
Q  465 aggggagggttatatcaactaggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 539  Q
    ||||  |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15374845 agggcggggttatatcaattaggtttacaccccgaaggtacttttgtcttctaccacctgctctgaaattttatt 15374919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 24422903 - 24422799
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||||| |||| |||||||||||||    
T  24422903 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcacttt 24422804  T
Q  129 agcct 133  Q
    |||||    
T  24422803 agcct 24422799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 11437208 - 11437301
Alignment:
Q  40 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  11437208 taaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcct 11437301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 51684472 - 51684366
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||  |||||| ||||||||||||  |||| |||||||| |||||||||||||||    
T  51684472 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcac 51684373  T
Q  126 tttagcc 132  Q
    |||||||    
T  51684372 tttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 24426073 - 24426173
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  24426073 tgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttt 24426172  T
Q  129 a 129  Q
    |    
T  24426173 a 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 52275071 - 52274967
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||| |||||||  |||||||||||| ||||||||||||  |||| |||||||||||||    
T  52275071 tgcaatgaggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttt 52274972  T
Q  129 agcct 133  Q
    |||||    
T  52274971 agcct 52274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 39699765 - 39699867
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| |||||||  |||||||||||| | ||||||||| | ||||||||||||||||||    
T  39699765 tgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcacttt 39699863  T
Q  129 agcc 132  Q
    ||||    
T  39699864 agcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 11436148 - 11436041
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  ||| |||||| |||||||||||||||||||||||| || |||   | ||||||||||||| ||||||||||||| |||||||||||||||    
T  11436148 agatgcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcac 11436049  T
Q  126 tttagcct 133  Q
    ||||||||    
T  11436048 tttagcct 11436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 41364931 - 41364829
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| | ||| ||||||||||||||    
T  41364931 tgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttt 41364833  T
Q  129 agcc 132  Q
    ||||    
T  41364832 agcc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 51685760 - 51685867
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||||  ||| || ||||||| ||||  ||||||||||||  |||||||||||||||    
T  51685760 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcac 51685859  T
Q  126 tttagcct 133  Q
    ||||||||    
T  51685860 tttagcct 51685867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 45148686 - 45148581
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| ||||||| |||||||||||||||| || ||||||| ||||||||||||| |||||||||||||  ||| ||||||||||    
T  45148686 agatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcac 45148588  T
Q  126 tttagcc 132  Q
    |||||||    
T  45148587 tttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 23980463 - 23980568
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| ||||||||||| |||| | |||||||| ||||||||||| ||||||  ||||||||||||| |||| |||||||  |||||||||||||||||    
T  23980463 atgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactt 23980562  T
Q  128 tagcct 133  Q
    ||||||    
T  23980563 tagcct 23980568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 35067000 - 35067104
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||   |||||| ||||||| ||||  |||||||| |||| ||||||||||||||||||    
T  35067000 tgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttt 35067099  T
Q  129 agcct 133  Q
    |||||    
T  35067100 agcct 35067104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 52827450 - 52827346
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  52827450 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 52827351  T
Q  129 agcct 133  Q
    |||||    
T  52827350 agcct 52827346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 37526873 - 37526975
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| |||||| |||||||||| |||| | |||||||||  ||||||||||||| ||||||||||||| ||||||||||| |||    
T  37526873 agatgcaaaggggctaaatcttagggg-ccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacac 37526971  T
Q  126 ttta 129  Q
    ||||    
T  37526972 ttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 45149965 - 45150068
Alignment:
Q  26 agatgcaatggggctaaatcatagggggc-caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgca 124  Q
    |||||||| ||||||||||| |||||||  ||||||||| ||||||||| ||| ||| ||||||||||||| ||||||||||| | ||||||||||||||    
T  45149965 agatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgca 45150063  T
Q  125 cttta 129  Q
    |||||    
T  45150064 cttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 52828068 - 52828168
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||  ||||||||||||| |||||||| |||  ||||||||||||||||||    
T  52828068 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttt 52828167  T
Q  129 a 129  Q
    |    
T  52828168 a 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 15373868 - 15373931
Alignment:
Q  272 ttatgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15373868 ttatgaaaaggaacggttatgtggtaattgaaagaaaaaataataatcaaaaggaactgttata 15373931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 36613910 - 36614005
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||| |||| |||| |||||||  || |||||| ||||||||||||    
T  36613910 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 39153111 - 39153214
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| ||| ||| |||||||||||||||||||  || ||| ||||||||||||| |||||||| |||| |||| ||||||||||    
T  39153111 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcac 39153210  T
Q  126 ttta 129  Q
    ||||    
T  39153211 ttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 39222468 - 39222575
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgca 124  Q
    ||||||||  |||| ||||| ||| |||| || |||||||||||| || ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||    
T  39222468 agatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgca 39222567  T
Q  125 ctttagcc 132  Q
    ||||||||    
T  39222568 ctttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 12389980 - 12390083
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| ||||||||||||||| || ||||||||  ||||||| |||||| ||||  ||||||||||||| | ||||||| ||||||||    
T  12389980 tgcaaaggggctaaatc-tagggggccaaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcacttt 12390078  T
Q  129 agcct 133  Q
    |||||    
T  12390079 agcct 12390083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 33088615 - 33088719
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| ||||| | ||||||||||||||||||| |||  ||  |||||||||||| ||||||| ||||  | ||||||||||||||||    
T  33088615 tgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcacttt 33088714  T
Q  129 agcct 133  Q
    |||||    
T  33088715 agcct 33088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 36612958 - 36612852
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||| ||||||| |||||||  |||||||||||||||||| ||| |   ||||||||||||  ||||||||||||| ||||||||| |||||    
T  36612958 agatgcaaagggactaaatcttagggggttaaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcac 36612860  T
Q  126 tttagcct 133  Q
    ||||||||    
T  36612859 tttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 43378708 - 43378810
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| || |||||||| |||| || |||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||| | | |||||||||||    
T  43378708 agatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaa-gagagaaaagtgcac 43378806  T
Q  126 ttta 129  Q
    ||||    
T  43378807 ttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 45157204 - 45157310
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| ||  ||| |||||||||||||||||||  |||||| ||||||||||||| |||||||| || | ||||| |||||||||    
T  45157204 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcac 45157302  T
Q  126 tttagcct 133  Q
    ||||||||    
T  45157303 tttagcct 45157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 50680437 - 50680335
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| |||||| | |||||| |||||||| || ||||||| ||||||||||||| ||||| ||||||| ||||||||| |||||    
T  50680437 agatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaa-gggggaaaaatgcac 50680339  T
Q  126 ttta 129  Q
    ||||    
T  50680338 ttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 14999361 - 14999284
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||| |||||||  |||||||||||| ||||||||||| | ||||||||||| |||||||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcct 14999284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 39698643 - 39698562
Alignment:
Q  52 ggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| |||||| |||| ||||||| ||||||||| ||| |||| |||||||| ||||| |||||||||||||||||    
T  39698643 ggccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcct 39698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 44404537 - 44404441
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||  ||||||||||||||| ||||||||||| ||||||| | |||||||| || ||||||||||||   ||| ||||||||| ||||||||    
T  44404537 ggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcct 44404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 52276161 - 52276261
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||| | ||| || ||||||||||| ||||||| |||||||| |||  ||||||||||||   |||| ||||||||||||    
T  52276161 tgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcacttt 52276260  T
Q  129 a 129  Q
    |    
T  52276261 a 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 7675454 - 7675560
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||| ||||||| || ||||| || ||||| |  |||||||||||| ||||||||||||| || || ||||| |||    
T  7675454 agatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagtacac 7675552  T
Q  126 tttagcct 133  Q
    ||||||||    
T  7675553 tttagcct 7675560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 35594321 - 35594216
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||  |||||| | ||||||||||||||  || ||||||| | ||||||||||| ||||||||||||  || ||||||||||||    
T  35594321 agatgcaaaggggctaaattttaggggtc-aaaattgtagttttaatacttaggggtc-aaaattgcaagtttttgaaagttaggggtggaaaagtgcac 35594224  T
Q  126 tttagcct 133  Q
    ||||||||    
T  35594223 tttagcct 35594216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 43058891 - 43058789
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||| || ||||||||||| ||| |||| |||||||||||||||||| |||||||  |||||||||||| |||| |||||| | |||| ||||||| ||    
T  43058891 agatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtac 43058793  T
Q  126 ttta 129  Q
    ||||    
T  43058792 ttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 11190462 - 11190384
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||| ||||||||||| ||||| |||||||||||||  |||| ||| |||| ||| |||||||||||||||||||    
T  11190462 caaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcct 11190384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 2129431 - 2129343
Alignment:
Q  388 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaacaaggggagggttat 477  Q
    ||||||||| |||||||| |||||| |||| ||||||||  || |||||||||||||||||||| |||||||||| |||||  |||||||    
T  2129431 tgaacttttcatgtgctacctaatttaatttcttgcagacctt-ttttttcataaaaattaattgggtccgccaaaaagggttgggttat 2129343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 7983152 - 7983053
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||||| |||||| ||||||| ||||||||| |||||  ||  |||||| ||||||||||||| | ||||||||| | ||| ||||||||||||||    
T  7983152 tgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcacttt 7983054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 41366129 - 41366232
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||| ||| |||| |||||  || ||| ||| | ||||||||| | ||||||||||||   |||||||||||||||||    
T  41366129 tgcaatggggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcacttt 41366227  T
Q  129 agcct 133  Q
    |||||    
T  41366228 agcct 41366232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 39152037 - 39151934
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| ||  | | |||||||||||||||||||  |||||| |||||||| |||| |||||||| |||| |||| |||| |||||    
T  39152037 agatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcac 39151938  T
Q  126 ttta 129  Q
    ||||    
T  39151937 ttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 43060013 - 43060108
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||| || |||| ||||||||||||||||||| ||| |||  ||||||| |||  ||||||||||||  ||||| ||||| |||||||||||    
T  43060013 gctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcct 43060108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 7674603 - 7674527
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||| ||| ||| ||||||||||||| |||| |||||| | |||||||||| ||||||||||||    
T  7674603 caaaattgtagtttttgtactta-gggcccaaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcct 7674527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 50681627 - 50681705
Alignment:
Q  54 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||| |||||||||||| || |||| |  ||||||||||||| |||||||| ||||  |||||||||||||||||||||    
T  50681627 ccaatattgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 35595187 - 35595295
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgt-agtttttgtatttaggggaccaaaattgc-aaggttttgaaagttaatgggggaaaagtgc 123  Q
    |||||||| ||||||||||| |||||| |||||||||| ||||||| ||  ||||||  ||||||||| ||| |||| |||||||  ||||||||||| |    
T  35595187 agatgcaaaggggctaaatcttagggg-ccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtac 35595285  T
Q  124 actttagcct 133  Q
    ||||||||||    
T  35595286 actttagcct 35595295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 14999983 - 15000057
Alignment:
Q  59 attgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||| ||||||| |||||||| |||||||||||| |||| |||||||  | || ||||||| ||||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcct 15000057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 16290170 - 16290092
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||| ||  || ||||||||||||||||  ||||||| |||| |||||| |||| |||||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcct 16290092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 25652820 - 25652742
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 104  Q
    ||||||||  |||||||||| ||| |||||||| || || |||||||| ||| |||| |||||||||||| ||||||||    
T  25652820 agatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagtttttgaaa 25652742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 40384831 - 40384727
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatg-ggggaaaagtgca 124  Q
    |||||||| | ||||||||  ||||||  |||||||||||||||||||  |||| ||| ||||||||||  |||||||| |||| | ||  |||||||||    
T  40384831 agatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaaattaaagaggaaaaaagtgca 40384732  T
Q  125 cttta 129  Q
    |||||    
T  40384731 cttta 40384727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 44411991 - 44412030
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaag 95  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  44411991 aaaattgtagtttttgtacttaggggactaaaattgcaag 44412030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 298 - 332
Target Start/End: Complemental strand, 2129504 - 2129470
Alignment:
Q  298 attgaaagaaaaaataataatcaaaaggaactgct 332  Q
    ||||||||||||||||||||| |||||||||||||    
T  2129504 attgaaagaaaaaataataatgaaaaggaactgct 2129470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 2129571 - 2129521
Alignment:
Q  273 tatgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaa 323  Q
    ||||||||| ||| | |||||| ||||||||||||||||||||||| ||||    
T  2129571 tatgaaaagaaactgatatgtgataattgaaagaaaaaataataataaaaa 2129521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 46066631 - 46066525
Alignment:
Q  23 cagagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtg 122  Q
    |||||||||||   ||||||||| |||||| | ||||||||||||||||||  || ||| | ||||| ||||  ||||||||||||  || |||||||||    
T  46066631 cagagatgcaaattggctaaatcttagggg-ctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta--ggaggaaaagtg 46066535  T
Q  123 cactttagcc 132  Q
    ||||| ||||    
T  46066534 cacttaagcc 46066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 638
Target Start/End: Original strand, 15374986 - 15375019
Alignment:
Q  605 gaacgaagggaatctaaaattcggaaggctatgt 638  Q
    |||||||||||||||||||||| |||||||||||    
T  15374986 gaacgaagggaatctaaaattcagaaggctatgt 15375019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 46524642 - 46524578
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaa 94  Q
    ||||| ||||||||||| |||||||||||| || || ||||| || | ||||||||||||||||||    
T  46524642 tgcaaaggggctaaatcttagggggccaaatttttatttttttta-tcaggggaccaaaattgcaa 46524578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 2e-39; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 19753017 - 19752911
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  19753017 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcac 19752919  T
Q  126 tttagcct 133  Q
    ||||||||    
T  19752918 tttagcct 19752911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 19754125 - 19754233
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggg-gaaaagtgca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||| ||||    
T  19754125 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgca 19754224  T
Q  125 ctttagcct 133  Q
    |||||||||    
T  19754225 ctttagcct 19754233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 25523175 - 25523068
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||||||||    
T  25523175 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 25523076  T
Q  126 tttagcct 133  Q
    ||||||||    
T  25523075 tttagcct 25523068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 18486897 - 18487004
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||||||||||||| |||| | || ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||    
T  18486897 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcac 18486996  T
Q  126 tttagcct 133  Q
    ||||||||    
T  18486997 tttagcct 18487004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 40255670 - 40255774
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||||||||||  |||||||||||| |||| ||| ||||  |||||||||||||||||    
T  40255670 tgcaatggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcacttt 40255769  T
Q  129 agcct 133  Q
    |||||    
T  40255770 agcct 40255774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 5778834 - 5778938
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||    
T  5778834 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 5778933  T
Q  129 agcct 133  Q
    |||||    
T  5778934 agcct 5778938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 28538779 - 28538675
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||| ||| |||  |||||||||||| ||||||||||||  || |||||||||||||||    
T  28538779 tgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcacttt 28538680  T
Q  129 agcct 133  Q
    |||||    
T  28538679 agcct 28538675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 22940641 - 22940723
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||| |||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22940641 ggggtcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 16650850 - 16650957
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||| | |||||||| ||||||||||||||| || |||||||  |||||||||||| |||| |||||||| || ||||||||||||    
T  16650850 agatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcac 16650949  T
Q  126 tttagcct 133  Q
    ||||||||    
T  16650950 tttagcct 16650957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 25055518 - 25055411
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||||| |||||||||||||||||||||||| ||  ||||||| ||||||||||||   || |||||||  |||||||||||||||    
T  25055518 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcac 25055419  T
Q  126 tttagcct 133  Q
    ||||||||    
T  25055418 tttagcct 25055411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 5778002 - 5777900
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||| ||||||||||||    
T  5778002 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcacttt 5777905  T
Q  129 agcct 133  Q
    |||||    
T  5777904 agcct 5777900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 20216768 - 20216861
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||| || | |||||||||||||||||||||||||| |||||  | ||||||||||| |||||||| |||| |||||||||||||||||||    
T  20216768 gggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 33160291 - 33160388
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| || |||| |||||||||||||| | || ||||||| | ||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  33160291 gggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcct 33160388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 36486486 - 36486590
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| ||||||||||||     
T  36486486 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttc 36486585  T
Q  129 agcct 133  Q
    |||||    
T  36486586 agcct 36486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 24333019 - 24332916
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| ||| ||| |||||||||||||||||||  || ||| ||||||||||||| |||||||| |||| |||| ||||||||||    
T  24333019 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcac 24332920  T
Q  126 ttta 129  Q
    ||||    
T  24332919 ttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 25056382 - 25056482
Alignment:
Q  32 aatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 131  Q
    |||| ||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||   | ||||||||||||||||||    
T  25056382 aatgaggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagc 25056481  T
Q  132 c 132  Q
    |    
T  25056482 c 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 42195238 - 42195137
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||  |||||| ||||||| ||||  |||| |||||||| |||||||||||||||    
T  42195238 agatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaa-ctttttaaagttaa-gggggaaaagtgcac 42195141  T
Q  126 ttta 129  Q
    ||||    
T  42195140 ttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 2686396 - 2686478
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    |||||||||| |||||||||||||||| |||||||| ||||||||||| ||| | || |||||||||||| |||| |||||||    
T  2686396 agatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagtta 2686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 20214277 - 20214196
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||||||||||||||||||  ||| |  | ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20214277 ggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 28539818 - 28539917
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||||| |||| ||  |||||||||||| |||| |||||| | ||||||||| ||||||||    
T  28539818 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttt 28539916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 1796131 - 1796054
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||||||||||||| ||||| | ||||| ||||||| ||||||||||||  || |||||| ||||||||||||    
T  1796131 caaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 7311685 - 7311589
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||| |||||||| |||||||||||||||||| || || | |||| |||||||| ||||||||||||  |||||    ||||||||||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggggggggtgcactttagcct 7311589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 18154595 - 18154493
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||| |||||||  ||| |||| |||||||||||||||||| ||||||| | ||||||| ||| ||||||||||||| |||  |||||| ||||||    
T  18154595 tgcaatggagctaaattttagagggc-aaaattgtagtttttgtacttaggggtc-aaaattgtaagtttttgaaagttaaggggaaaaaagttcacttt 18154498  T
Q  129 agcct 133  Q
    |||||    
T  18154497 agcct 18154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 18485251 - 18485137
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaa-------ttgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaa 118  Q
    |||||||| ||||||||||| |||||||||||||       |||| |||||  || ||||||| ||||||||||||| |||| |||||||  |||| |||    
T  18485251 agatgcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaa 18485152  T
Q  119 agtgcactttagcct 133  Q
    |||||||||||||||    
T  18485151 agtgcactttagcct 18485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 25524143 - 25524230
Alignment:
Q  47 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 133  Q
    |||| |||||||||||||||||||||| ||||||| |||||||| |||  |||| ||| |||   |||||||||||||||||||||||    
T  25524143 taggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcct 25524230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 33158180 - 33158097
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||| ||||||||||||||||||| ||||||   |||||||||||| ||||||||||||  |||  |||| |||||||||||||    
T  33158180 ggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 5730517 - 5730440
Alignment:
Q  57 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa-tgggggaaaagtgcactttagcct 133  Q
    ||||||| ||||| ||| |||||   ||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcct 5730440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 25524093 - 25524158
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattg 91  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| | |||||||||    
T  25524093 agatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 36485403 - 36485302
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||| |||||| ||||||||||||||| ||||||||||| ||| | |  |||||||| ||| |||| |||||||  || |||||| ||||||||    
T  36485403 tgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcacttt 36485304  T
Q  129 ag 130  Q
    ||    
T  36485303 ag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 5962579 - 5962671
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||  |||| ||| |||||| ||||||||||| |||||||||||||||| |||  |||||||||| |  | || |||||||||||||||||    
T  5962579 gctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttgaaagtca--gtggaaaaagtgcactttagcc 5962671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 2685820 - 2685749
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||||||||||||||| ||||||||||||||||  ||| |||||||| |||  ||||||| |||||| ||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaatta--gggggaatagtgcatttta 2685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 1797295 - 1797375
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 109  Q
    ||||| ||||||||||| || ||| ||||||||||||||||||| | || ||  ||||||||||||| |||| ||| ||||    
T  1797295 tgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaa 1797375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16650098 - 16650042
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggga 82  Q
    |||||||| |||| |||||| ||| ||| ||||||||||||||||||| ||||||||    
T  16650098 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttagggga 16650042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 21835143 - 21835040
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||  ||||||  ||||||  |||  |||| ||| |||  ||||| ||||||||||||    
T  21835143 tgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagaggggg-aaagtgcacttt 21835045  T
Q  129 agcct 133  Q
    |||||    
T  21835044 agcct 21835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 42196195 - 42196302
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||||| |||||| | |||| |||||||||||||  ||| || ||||| |  |||  |||| |||||||  ||||| |||||||||    
T  42196195 agatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcac 42196294  T
Q  126 tttagcct 133  Q
    ||||||||    
T  42196295 tttagcct 42196302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  58 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    ||||||||||||||||  |||||  ||||||||||||| ||||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 7899882 - 7899984
Alignment:
Q  31 caatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 130  Q
    ||||||||||||||| |||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7899882 caatggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 7899981  T
Q  131 cct 133  Q
    |||    
T  7899982 cct 7899984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 22848294 - 22848190
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||    
T  22848294 tgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttt 22848195  T
Q  129 agcct 133  Q
    |||||    
T  22848194 agcct 22848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 38840491 - 38840595
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||    
T  38840491 tgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 38840590  T
Q  129 agcct 133  Q
    |||||    
T  38840591 agcct 38840595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 38839345 - 38839241
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||| |||| |||| |||| ||||||||    
T  38839345 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcacttt 38839246  T
Q  129 agcct 133  Q
    |||||    
T  38839245 agcct 38839241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 23869530 - 23869636
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||| || |||||||||||||||||||||||||| |||||||||||| ||||| |||||||| || ||||||||||||    
T  23869530 agatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaa-gtttttaaagttaagggtggaaaagtgcac 23869628  T
Q  126 tttagcct 133  Q
    ||||||||    
T  23869629 tttagcct 23869636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 36449861 - 36449777
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36449861 ggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 36449777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 18299479 - 18299373
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| || ||||| | ||||||||| ||| ||||||||||||  || ||||||||||||    
T  18299479 agatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcac 18299380  T
Q  126 tttagcc 132  Q
    |||||||    
T  18299379 tttagcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 7898794 - 7898694
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||||||||||||||||| | || ||||| | | ||||||||||| ||||||||||||| ||| ||||||||||||||    
T  7898794 tgcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttt 7898695  T
Q  129 a 129  Q
    |    
T  7898694 a 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 11258809 - 11258913
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  | ||| ||| ||||||||    
T  11258809 tgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcacttt 11258908  T
Q  129 agcct 133  Q
    |||||    
T  11258909 agcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 18904473 - 18904366
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||| || |||||||| || |||||  |||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||||| |||||||||||||||    
T  18904473 agatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcac 18904374  T
Q  126 tttagcct 133  Q
    ||||||||    
T  18904373 tttagcct 18904366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 22587949 - 22588055
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||   |||||||| |||||    
T  22587949 agatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatagggg-ccaaaattgcaagtttttgaaagttatgaggggaaaaatgcac 22588047  T
Q  126 tttagcct 133  Q
    ||||||||    
T  22588048 tttagcct 22588055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 36450939 - 36451018
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  36450939 gggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 41878197 - 41878092
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgca---aggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| ||||||| |||||||||||   || ||||||||||||| ||||| |||||||||    
T  41878197 tgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaa-ggggggaaagtgcac 41878099  T
Q  126 tttagcc 132  Q
    |||||||    
T  41878098 tttagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 41879210 - 41879314
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||| |||||||  |||||||  ||||||||||||| |||| ||||||| ||||||||||||| |||||||| |||| |||| ||||||| |||||    
T  41879210 tgcaatggtgctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtacttt 41879309  T
Q  129 agcct 133  Q
    |||||    
T  41879310 agcct 41879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 1034475 - 1034570
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||| ||||||| | ||||||| ||||| |||  |||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 18906006 - 18906089
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  18906006 ggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcct 18906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 13030383 - 13030293
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 131  Q
    |||||||| |||||||| ||||||||| |||||||| ||||||| |||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  13030383 gctaaatcttagggggcaaaaattgtaatttttgtacttagggg-ccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 18300720 - 18300822
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||||||||| ||||||| | |||||||||||||||||| |||||||  |||||||||||| || |||||||||  ||||||||||||||     
T  18300720 agatgcaaaggggctaaattataggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaa 18300816  T
Q  126 tttagc 131  Q
    ||||||    
T  18300817 tttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 18869001 - 18868923
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||  || |||||||| |||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcct 18868923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 11257724 - 11257621
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||| ||||||||||||||||||| || ||||||    ||||||||||| ||||||||||||  || | |||||||||||||    
T  11257724 tgcaatggggctaaatcttaggaggccaaaattgtagtttttatacttagggttt-aaaattgcaagtttttgaaagttagaggagtaaaagtgcacttt 11257626  T
Q  129 agcct 133  Q
    |||||    
T  11257625 agcct 11257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 18797353 - 18797245
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggg-ggaaaagtgca 124  Q
    |||||||| ||||||||||  ||||||| |||||||||||||||  || ||| |||  |||||||||||| ||||||||||||  ||| |||||||||||    
T  18797353 agatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgca 18797254  T
Q  125 ctttagcct 133  Q
    |||||||||    
T  18797253 ctttagcct 18797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 11938796 - 11938890
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||| || ||||||| ||||||| || |||||||| ||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  11938796 gctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 11938890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 13568049 - 13567975
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||   |||||||||| |||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 610 - 719
Target Start/End: Original strand, 17906192 - 17906302
Alignment:
Q  610 aagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaataatcccatca-acaatgtatgtaataacatg 708  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||  || |||| |||| || |||||||||||| || ||||  | ||||||||||||    
T  17906192 aagggaatctaaaattcggaagaccatgtttgtccctgtaaaaatcatgcctaagtaaaacagataaataatcccaccagacaacatttgtaataacatg 17906291  T
Q  709 accatgactag 719  Q
    |||||||||||    
T  17906292 accatgactag 17906302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 22587606 - 22587525
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||||||||    
T  22587606 agatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 28618027 - 28617946
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||||||| || |||| ||||||||||||| ||||||||||||    
T  28618027 agatgcaaaggggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 24475318 - 24475248
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    ||||||| ||||||||||||||||||||||||| || ||||||| | |||||| |||| ||||||||||||    
T  24475318 gctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 802588 - 802692
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| ||||  ||||| ||| ||| |||||||||||||||||||   ||||| ||||||||||||| |||||||| || | ||||||||||| |||||    
T  802588 atgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactt 802686  T
Q  128 tagcct 133  Q
    ||||||    
T  802687 tagcct 802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 388 - 459
Target Start/End: Complemental strand, 10928137 - 10928068
Alignment:
Q  388 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgc 459  Q
    ||||||||| |||||||| || |||||||| |||||||| |||  |||||||||||||||||||||||||||    
T  10928137 tgaacttttcatgtgctacctgattcaatttcttgcagacttt--tttttcataaaaattaattaggtccgc 10928068  T

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Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 13570575 - 13570659
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||| |||||||| ||||||||||| ||| ||||| ||||||||||| ||||||||||||  ||  ||||| |||||||||||||    
T  13570575 ggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcct 13570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 24476863 - 24476943
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||| |||| ||||||   |||| ||||||||||| |||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcactctagcc 24476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 32739706 - 32739647
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    |||||||||||||||||||||||||  || ||| ||||||||||||| ||||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 1033312 - 1033212
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||| |||   ||||| || |||| ||||||||||| ||||||||||||| |||| |||||| | ||||||||||| ||||||    
T  1033312 tgcaatggggctaaatcttagaggggttaaattataattttggtatttagggg-ccaaaattgcaagtttttaaaagtt-aggggggaaaagtacacttt 1033215  T
Q  129 agc 131  Q
    |||    
T  1033214 agc 1033212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 16446231 - 16446153
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||||||| | |   ||||||||||| ||||||||||||| ||  ||||| |||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcct 16446153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 26545516 - 26545621
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||| ||| ||||||| || |||||||||||| |||  |||||||||||  |||||||||| |    || ||||||||||    
T  26545516 agatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcac 26545615  T
Q  126 tttagc 131  Q
    ||||||    
T  26545616 tttagc 26545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 1093144 - 1093247
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| ||| |||  ||||||||| ||||||||| ||||| | || ||||||||  |||| |||||||| ||||||||| | ||||||    
T  1093144 tgcaaaggggctaaatcttagcgggttaaaattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa-tacacttt 1093242  T
Q  129 agcct 133  Q
    |||||    
T  1093243 agcct 1093247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 40140342 - 40140422
Alignment:
Q  388 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaacaaggg 468  Q
    ||||||||| ||||| || || ||||||||||||||  | ||| ||||||||||||||||||||||| || |||| |||||    
T  40140342 tgaacttttcatgtgttacctgattcaattccttgcgaacttttttttttcataaaaattaattaggcccaccaaaaaggg 40140422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 21837299 - 21837355
Alignment:
Q  75 ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||| ||||||||||||| ||||||||||||  |||| ||||||||||||||||||    
T  21837299 ttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcct 21837355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 810778 - 810854
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 104  Q
    |||||| ||||  ||||| ||| ||| |||||||||||||||||||   ||||| ||||||||||||| ||||||||    
T  810778 atgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaa 810854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 10928234 - 10928182
Alignment:
Q  282 gaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctat 334  Q
    |||||| |||||| ||| |||||||||| |||||||| |||||||||||||||    
T  10928234 gaacagttatgtgataactgaaagaaaatataataatgaaaaggaactgctat 10928182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 8535654 - 8535752
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||||||| || ||||||| |||||||||||||| | || |||  ||| ||||||| |||| |||| |||||||  || ||||||||| |||||    
T  8535654 tgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtgtacttt 8535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 7e-33; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 52491605 - 52491709
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| || |||||||| ||||||    
T  52491605 tgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacacttt 52491704  T
Q  129 agcct 133  Q
    |||||    
T  52491705 agcct 52491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 1290193 - 1290300
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| |||||||| |||||||||||||||||| |||| || ||||||||||||| ||||||||||||| |||||||||||||||    
T  1290193 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcac 1290292  T
Q  126 tttagcct 133  Q
    ||||||||    
T  1290293 tttagcct 1290300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 10471386 - 10471489
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  10471386 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 10471485  T
Q  129 agcc 132  Q
    ||||    
T  10471486 agcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 8758835 - 8758935
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||| |||||||| || ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||    
T  8758835 tgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttt 8758934  T
Q  129 a 129  Q
    |    
T  8758935 a 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 25685820 - 25685924
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  25685820 tgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 25685919  T
Q  129 agcct 133  Q
    |||||    
T  25685920 agcct 25685924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 49308032 - 49308128
Alignment:
Q  35 ggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  49308032 ggggcaaaatcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 49308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 19750573 - 19750673
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||    
T  19750573 tgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttt 19750671  T
Q  129 ag 130  Q
    ||    
T  19750672 ag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 19789233 - 19789133
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||    
T  19789233 tgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttt 19789135  T
Q  129 ag 130  Q
    ||    
T  19789134 ag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 1963299 - 1963195
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||||||| || |||||||| ||||||||||||||||||  |||| | ||||||||||||  ||||||||||||| ||||||||||||||||||    
T  1963299 tgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 1963200  T
Q  129 agcct 133  Q
    |||||    
T  1963199 agcct 1963195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 12129729 - 12129626
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||||| || |||| ||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  12129729 agatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcac 12129630  T
Q  126 ttta 129  Q
    ||||    
T  12129629 ttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 17388215 - 17388312
Alignment:
Q  35 ggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||| || | |||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  17388215 ggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 17388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 8155843 - 8155741
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggga-ccaaaattgcaaggttttgaaagttaatgggggaaaagtgca 124  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||| | |||||||| | ||||||||||| ||||||||||||  ||||||||||||||    
T  8155843 agatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgca 8155746  T
Q  125 cttta 129  Q
    |||||    
T  8155745 cttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 8757777 - 8757674
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| || ||| ||||||||||||||| |||| ||||||| | ||||||| ||| ||||||||||||| |||| |||||||||||||    
T  8757777 tgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaa-ggggaaaaagtgcacttt 8757679  T
Q  129 agcct 133  Q
    |||||    
T  8757678 agcct 8757674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 10470649 - 10470545
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | |||||||  |||| ||| |||| ||  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  10470649 tgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 10470550  T
Q  129 agcct 133  Q
    |||||    
T  10470549 agcct 10470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 17383075 - 17382992
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||    
T  17383075 gggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcct 17382992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 31599892 - 31599788
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| ||||||||||||     
T  31599892 tgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttc 31599793  T
Q  129 agcct 133  Q
    |||||    
T  31599792 agcct 31599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 35935531 - 35935631
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||| ||||||| | ||||||||||  |||| |||||||| ||||| ||||||||||||    
T  35935531 tgcaatgaggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttt 35935630  T
Q  129 a 129  Q
    |    
T  35935631 a 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 48780351 - 48780247
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| |||| |||||||  ||||||||||||||||||    
T  48780351 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcacttt 48780252  T
Q  129 agcct 133  Q
    |||||    
T  48780251 agcct 48780247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 1835097 - 1835204
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  |  ||||||||||||    
T  1835097 agatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcac 1835196  T
Q  126 tttagcct 133  Q
    ||||||||    
T  1835197 tttagcct 1835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 25685037 - 25684934
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  25685037 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 25684938  T
Q  129 agcc 132  Q
    ||||    
T  25684937 agcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 3928855 - 3928960
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||  ||  |||||| ||||||| |||| |||||||||||||  |||||||||||||||||    
T  3928855 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactt 3928954  T
Q  128 tagcct 133  Q
    ||||||    
T  3928955 tagcct 3928960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 35934445 - 35934347
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| || |||||||||||| || ||| | || |||||||||||||||| |||| ||||||||||||  ||||||||||||||||||    
T  35934445 tgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttt 35934348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 5526124 - 5526227
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| |||||  || ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||    
T  5526124 tgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttt 5526222  T
Q  129 agcct 133  Q
    |||||    
T  5526223 agcct 5526227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 31600990 - 31601086
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||||| || |||| ||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| |||||||||||||||||    
T  31600990 gggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 48781044 - 48781147
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||  ||||||| | ||||||| ||||| ||| |||||| |||||||||||||  ||||||||||||  ||||||||||||||||||    
T  48781044 tgcaatggggctaaattttaggggggctaaattgtggttttagtacttaggg-accaaaattgcaaatttttgaaagttagagggggaaaagtgcacttt 48781142  T
Q  129 agcct 133  Q
    |||||    
T  48781143 agcct 48781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 26421627 - 26421723
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| || |||| ||||||||||||||||||| ||||| |  |||||||||||| ||||||||||| |  ||||||||||||||||||||||    
T  26421627 gggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcct 26421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 5525462 - 5525359
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||| | ||||||||| || |||||    
T  5525462 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtacttt 5525364  T
Q  129 agcct 133  Q
    |||||    
T  5525363 agcct 5525359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 1834226 - 1834119
Alignment:
Q  26 agatgcaatggggctaaatcataggggg-ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgca 124  Q
    ||||||||  |||||||||| ||||||| ||||||||||||||||| ||  ||||||  |||||||| ||| |||| |||||||  ||||||||||||||    
T  1834226 agatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgca 1834127  T
Q  125 ctttagcc 132  Q
    ||||||||    
T  1834126 ctttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 10447113 - 10447006
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa-tgggggaaaagtgca 124  Q
    |||||||| ||||||||||| |||||||  |||||||| |||||||||  |||||| | ||||||||||  |||||||| ||||  ||||||||||||||    
T  10447113 agatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgca 10447014  T
Q  125 ctttagcc 132  Q
    ||||||||    
T  10447013 ctttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 13386119 - 13386013
Alignment:
Q  29 tgcaatggggctaaatcatagggggcca-aaattgtagtttttgtatttaggggaccaaaattgcaaggtttt-gaaagttaatgggggaaaagtgcact 126  Q
    ||||||| ||||||||| |||||||  | ||||||| ||||| ||| ||||||| ||||||||||||| |||| ||||||||  ||||||||||||||||    
T  13386119 tgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcact 13386020  T
Q  127 ttagcct 133  Q
    |||||||    
T  13386019 ttagcct 13386013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 13386530 - 13386635
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgcactt 127  Q
    ||||||||||||| ||| ||||||| | ||||||| ||||| ||| ||| |||  |||||||||||| ||||||||||||  ||||| ||||||||||||    
T  13386530 tgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactt 13386629  T
Q  128 tagcct 133  Q
    ||||||    
T  13386630 tagcct 13386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 13509346 - 13509460
Alignment:
Q  18 aggagcagagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaa 117  Q
    ||||||| || ||||| ||||||||||| ||||||  |||||||||||||||  || || |||| ||||||||||||  |||| |||||| | |||||||    
T  13509346 aggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaa 13509444  T
Q  118 aagtgcactttagcct 133  Q
    |||| |||||||||||    
T  13509445 aagtacactttagcct 13509460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 33310095 - 33310187
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||  | |||||| |||| |||| |||||||   ||  |||||||||||||||||    
T  33310095 ggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta---ggaaaaaagtgcactttagcc 33310187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 21539066 - 21539162
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtg 122  Q
    |||||||| || |||||||| ||||||| ||||||||||||||||  | ||||| | ||||||||||||| |||| ||| |||| || |||||||||    
T  21539066 agatgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 55603549 - 55603628
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||||||||| ||||||||||||   ||||||  ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaa-ggggaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 1289203 - 1289100
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| || | ||| ||||||||||||||| || |||| ||| ||||||| |||   |||||||||||| ||||||||||| |||    
T  1289203 agatgcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcac 1289104  T
Q  126 ttta 129  Q
    ||||    
T  1289103 ttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 10448255 - 10448362
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||| ||| ||| |||||||||||||||||||||||  |||||| | ||||| ||||  |||||||| |||  || ||  ||||||||    
T  10448255 agatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcac 10448354  T
Q  126 tttagcct 133  Q
    ||||||||    
T  10448355 tttagcct 10448362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 1964464 - 1964542
Alignment:
Q  54 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||||||||||||||   |||||| ||||||||| ||  |||| |||||||| || |||||||||||||||||||    
T  1964464 ccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 3927762 - 3927665
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||| ||||| || ||||||||||||||||  ||  | |||| ||||||| ||||  |||| |||||||  |||||||||||||||||||||||    
T  3927762 gggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcct 3927665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 21178092 - 21177996
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||  ||||||| ||||||||||||||||||   ||||||| |||||||||||  || |||||||| | ||||| ||||| |||||||||||    
T  21178092 gggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagtt-agggggggaaagtacactttagcct 21177996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 55602451 - 55602379
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||||||||| ||| ||| |||| ||||||||||| |||||||||||||  |||||||| |||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaa-aggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 14868990 - 14868889
Alignment:
Q  30 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||||||| || |||||||  ||| |||| |||||  || |||| || ||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  14868990 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 14868893  T
Q  130 gcct 133  Q
    ||||    
T  14868892 gcct 14868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 14876944 - 14877045
Alignment:
Q  30 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||||||| || |||||||  ||| |||| |||||  || |||| || ||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  14876944 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 14877041  T
Q  130 gcct 133  Q
    ||||    
T  14877042 gcct 14877045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 8194012 - 8194072
Alignment:
Q  274 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    ||||||| |||| | |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  8194012 atgaaaaagaaccgttatgtggtaattaaaagaaaa-ataataatgaaaaggaactgctata 8194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 46638723 - 46638803
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 109  Q
    ||||| ||| ||||||| |||||||| ||||||||| |||||||   ||||||| ||||||| |||  |||||||||||||    
T  46638723 tgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttgaaagttaa 46638803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 49306851 - 49306774
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg--aaaagtgcactttagcct 133  Q
    ||||||||||||||||||| |||   | ||||||||||||| ||||||||||   ||||||  ||||||||||||||||||    
T  49306851 caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagt---tgggggaaaaaagtgcactttagcct 49306774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 7e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 12700279 - 12700174
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||| |||||||||    
T  12700279 agatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcac 12700182  T
Q  126 tttagcct 133  Q
    ||||||||    
T  12700181 tttagcct 12700174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 54540788 - 54540892
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  54540788 tgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 54540887  T
Q  129 agcct 133  Q
    |||||    
T  54540888 agcct 54540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 8456580 - 8456479
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | |||| |||||||||||||    
T  8456580 tgcaatgaggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcacttt 8456482  T
Q  129 agc 131  Q
    |||    
T  8456481 agc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 7267746 - 7267647
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  7267746 tgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttt 7267648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 29931329 - 29931225
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  || |||||||||||||||    
T  29931329 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29931230  T
Q  129 agcct 133  Q
    |||||    
T  29931229 agcct 29931225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 29980483 - 29980379
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  || |||||||||||||||    
T  29980483 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29980384  T
Q  129 agcct 133  Q
    |||||    
T  29980383 agcct 29980379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 12703495 - 12703601
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||  ||||||||||| |  ||| ||||||||||    
T  12703495 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcac 12703593  T
Q  126 tttagcct 133  Q
    ||||||||    
T  12703594 tttagcct 12703601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 7758508 - 7758401
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||| ||| |||| |||||| |||||||| |||||||||||||||||| |||||||  |||||||||||| ||||||||||||| |||| ||||||||||    
T  7758508 agatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcac 7758409  T
Q  126 tttagcct 133  Q
    ||||||||    
T  7758408 tttagcct 7758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 29932697 - 29932800
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||| ||||||| || |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  29932697 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 29932795  T
Q  129 agcct 133  Q
    |||||    
T  29932796 agcct 29932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 29981851 - 29981954
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||| ||||||| || |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  29981851 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 29981949  T
Q  129 agcct 133  Q
    |||||    
T  29981950 agcct 29981954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 47610578 - 47610678
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  47610578 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 47610677  T
Q  129 a 129  Q
    |    
T  47610678 a 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 54539849 - 54539754
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||| ||||||  |||||||||||||||||||||||||||   ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  54539849 gctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcct 54539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 47614291 - 47614185
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| | ||||||||| ||||||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||| ||||||||||    
T  47614291 agatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcac 47614192  T
Q  126 tttagcc 132  Q
    |||||||    
T  47614191 tttagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 22776809 - 22776914
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| |||||||| || |||||||||||||||||||||||||||  |||||| ||||||||||||  || |||||||||  || ||||||||||||||    
T  22776809 atgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactt 22776908  T
Q  128 tagcct 133  Q
    ||||||    
T  22776909 tagcct 22776914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 19984955 - 19984848
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| ||  ||| |||||||||||||||||||  |||||| ||||||||||||| |||||||| |||  |||||||||||||||    
T  19984955 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcac 19984856  T
Q  126 tttagcct 133  Q
    ||||||||    
T  19984855 tttagcct 19984848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 534594 - 534498
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||| |||||||||||||||||||||||||||  |||| |  |||||||||||| |||||| |||||  |||| ||||||||||||||||||    
T  534594 ggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcct 534498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 7268825 - 7268924
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||| ||||||| |||| ||||||||||||||||| | || ||||| | ||||||||||||| ||||||||||| | ||||||||||||||||||    
T  7268825 tgcaatgggactaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttt 7268923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 28262295 - 28262192
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||| | ||||||||||||||||||    
T  28262295 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtt-aggggggaaaagtgcacttt 28262197  T
Q  129 agcct 133  Q
    |||||    
T  28262196 agcct 28262192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 28263109 - 28263213
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| ||||| |||||||  ||||||||||||||||||    
T  28263109 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcacttt 28263208  T
Q  129 agcct 133  Q
    |||||    
T  28263209 agcct 28263213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 47609800 - 47609696
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  |||||||||||||| |||    
T  47609800 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcatttt 47609701  T
Q  129 agcct 133  Q
    |||||    
T  47609700 agcct 47609696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 52276407 - 52276303
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||| ||  ||||||||||||||||||    
T  52276407 tgcaatggggctaaaacatagggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttt 52276308  T
Q  129 agcct 133  Q
    |||||    
T  52276307 agcct 52276303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 52281545 - 52281649
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||| ||  ||||||||||||||||||    
T  52281545 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttt 52281644  T
Q  129 agcct 133  Q
    |||||    
T  52281645 agcct 52281649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 51470075 - 51469972
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| |||  | ||||||||||||||||    
T  51470075 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttt 51469976  T
Q  129 agcc 132  Q
    ||||    
T  51469975 agcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 52840602 - 52840705
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| ||||||||| |||||  || ||||||  ||||||||||||| ||||||||||||  || ||||||| |||||||    
T  52840602 tgcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcacttt 52840701  T
Q  129 agcc 132  Q
    ||||    
T  52840702 agcc 52840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 55192014 - 55192096
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||| ||||||||| | |||||||||||    
T  55192014 ggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagcct 55192096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 18442734 - 18442629
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactt 127  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||  | |||| ||||||| |||| |||||||||||||   ||||| |||||||||||    
T  18442734 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactt 18442635  T
Q  128 tagcct 133  Q
    ||||||    
T  18442634 tagcct 18442629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 19487808 - 19487703
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactt 127  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||  | |||| ||||||| |||| |||||||||||||   ||||| |||||||||||    
T  19487808 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactt 19487709  T
Q  128 tagcct 133  Q
    ||||||    
T  19487708 tagcct 19487703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 40426785 - 40426877
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtat-ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||| | ||| ||||||  |||| |||||||| |||||||||||||||||||    
T  40426785 gctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 53614902 - 53614818
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||| ||| ||||||||||||| || |||||| |||||||||||||    
T  53614902 gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcct 53614818  T

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Target: chr3; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 5029682 - 5029784
Alignment:
Q  30 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||||||| || |||||||  |||||||| ||||| ||| ||||| | ||||||||||||| ||||||||| | | |||||||||||||||||||    
T  5029682 gcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 5029780  T
Q  130 gcct 133  Q
    ||||    
T  5029781 gcct 5029784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 11671336 - 11671442
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||| || |||| |||||||||||||| ||||  |||||||||| |||||||||| | ||||||||||| ||||||||||| | | || ||||||||||    
T  11671336 agatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcac 11671434  T
Q  126 tttagcct 133  Q
    ||||||||    
T  11671435 tttagcct 11671442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 24516554 - 24516459
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||| || ||||||||||||||||||||| || ||||||  ||||||||||||| |||| |||||||  |||| ||||||||||||| ||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttggcct 24516459  T

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Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 18456063 - 18456165
Alignment:
Q  31 caatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcacttta 129  Q
    ||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||   |||||||||||||||||||    
T  18456063 caatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcacttta 18456162  T
Q  130 gcc 132  Q
    |||    
T  18456163 gcc 18456165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 19986065 - 19986174
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagg--ggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 123  Q
    |||||||| |||| |||||| ||| ||| |||||||||||||||| ||  ||||  || ||||||||||||| |||||||| ||||  ||||||||||||    
T  19986065 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgc 19986164  T
Q  124 actttagcct 133  Q
    ||||||||||    
T  19986165 actttagcct 19986174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 47615592 - 47615650
Alignment:
Q  75 ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  47615592 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 47615650  T

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Target: chr3; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 535787 - 535883
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||||| |||||||  |||||| |||||||  || ||| ||||||||||||||||| ||||||||||||  || |||||||| ||||||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 51470453 - 51470556
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||| |||||||| ||||||  | ||||||| ||||| ||| |||||||| | |||||||||| ||||||||||| | ||||||| ||||||||||    
T  51470453 tgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcacttt 51470551  T
Q  129 agcct 133  Q
    |||||    
T  51470552 agcct 51470556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 23770402 - 23770505
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| |||||||| ||||||||||||||||||  || ||||||||||||| ||  |||| ||| |||| ||| ||||| |||||    
T  23770402 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcac 23770501  T
Q  126 ttta 129  Q
    ||||    
T  23770502 ttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 51037638 - 51037536
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||||||| || |||||||| |||||||||||||||||   ||| ||  |||||||||||  ||||||||||||| ||| ||||||||||||||    
T  51037638 tgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcacttt 51037540  T
Q  129 agcc 132  Q
    ||||    
T  51037539 agcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 46721217 - 46721322
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| ||||||||||| |||||| | ||||||||||||||||||  ||||||   ||||| ||||  |||| |||||||  ||| |||||||||||||    
T  46721217 atgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactt 46721316  T
Q  128 tagcct 133  Q
    ||||||    
T  46721317 tagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 5001275 - 5001199
Alignment:
Q  57 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| ||  || ||||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcct 5001199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 8876001 - 8875905
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||| |||||||||||||||||||||||||||  || ||| | |||||||||   ||||  || |||| ||| |||||||||||||||||||    
T  8876001 ggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcct 8875905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 46720037 - 46719941
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||||| ||| || | ||||||||||||||| ||  |||||| ||||||| ||||  |||| |||||||| ||||||||| ||||||||||||    
T  46720037 gggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 51038813 - 51038892
Alignment:
Q  54 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||||||||||||   ||||||  |||||||||||  |||| |||||||| || ||||||||||||||||||||    
T  51038813 ccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcct 51038892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 34019152 - 34019241
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||||  |||||| ||||||||||||| ||||||  ||||||  |||||||||||| |||||||||||||  |||||||| || ||||||    
T  34019152 gctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaa--ggggaaaaatgtacttta 34019241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 54987002 - 54987103
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| || |||||||| ||| ||| ||||||| |||||||| ||  |||||||| ||||| ||||  |||||||| |||  |||||||||||||||    
T  54987002 agatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcac 54987099  T
Q  126 ttta 129  Q
    ||||    
T  54987100 ttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 31645079 - 31645000
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaag 105  Q
    ||||||||  |||||||||| |||| ||  |||||||||||||||| | ||||||| ||||||||| ||| |||||||||    
T  31645079 agatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 49216341 - 49216247
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||| || |||| || ||||||||||||||||  ||||||  |||||||||||  |||||||| |||   | |||||||||||||||||||    
T  49216341 gctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 53901404 - 53901487
Alignment:
Q  47 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||||| ||||||||||||||| ||| ||   |||||||||||  |||| ||| |||  ||||||||||||||||||||||    
T  53901404 tagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagcc 53901487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 6170348 - 6170296
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    ||||||||| |||||||| ||| |||| |||||||||||| ||||||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagtta 6170296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 6249685 - 6249633
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    |||||||||||||||||| ||| ||||  ||||||||||| ||||||||||||    
T  6249685 aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 52839140 - 52839036
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||  ||| |||  |||||||| ||||| ||| |||| ||  ||||||| |||  ||||| ||||||  ||||||||| ||||||||    
T  52839140 tgcaatggggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcacttt 52839041  T
Q  129 agcct 133  Q
    |||||    
T  52839040 agcct 52839036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 23769939 - 23769856
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||| ||||||||||||||||| |  ||| |||  ||||||||||  | ||||||||||| || |||||||||||||| |||||    
T  23769939 ggggtcaaaattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcacttcagcct 23769856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 52104569 - 52104484
Alignment:
Q  40 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||| |||| |||||||||| |||||||||||  ||  ||||||||||| |||  ||||||||||||  |||||||||||||| ||||    
T  52104569 taaatcttaggtggccaaaattatagtttttgtacata--ggaccaaaattacaactttttgaaagtta--gggggaaaagtgcatttta 52104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 51347360 - 51347271
Alignment:
Q  40 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||| ||||||| |||||||||  |||||||   ||| |||||||||||||||  |||| ||| ||||  |||| |||||||||||||    
T  51347360 taaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcacttta 51347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 2e-30; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 12353359 - 12353461
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12353359 tgcaatggggctaaatcttagggggccaaaattatag-ttttgtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttt 12353456  T
Q  129 agcct 133  Q
    |||||    
T  12353457 agcct 12353461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 10007758 - 10007865
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| |||||| |||||||||| |||| | || ||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  10007758 agatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 10007857  T
Q  126 tttagcct 133  Q
    ||||||||    
T  10007858 tttagcct 10007865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 18979125 - 18979220
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 131  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  18979125 gggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 1824084 - 1824174
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  1824084 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 1858529 - 1858619
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  1858529 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 10006450 - 10006344
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  10006450 agatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 10006351  T
Q  126 tttagcc 132  Q
    |||||||    
T  10006350 tttagcc 10006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 29968335 - 29968434
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||    
T  29968335 tgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcacttt 29968433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 12352024 - 12351920
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||  |||||||||||  ||||||||||||| ||||| ||| ||||||||    
T  12352024 tgcaatgaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcacttt 12351925  T
Q  129 agcct 133  Q
    |||||    
T  12351924 agcct 12351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 5514087 - 5513981
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||  ||||||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||| ||||||||||    
T  5514087 agatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcac 5513989  T
Q  126 tttagcct 133  Q
    ||||||||    
T  5513988 tttagcct 5513981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 38980042 - 38980146
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  38980042 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 38980141  T
Q  129 agcct 133  Q
    |||||    
T  38980142 agcct 38980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 39011139 - 39011243
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  39011139 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 39011238  T
Q  129 agcct 133  Q
    |||||    
T  39011239 agcct 39011243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 22221359 - 22221466
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||| || ||||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  || ||||||||||||    
T  22221359 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcac 22221458  T
Q  126 tttagcct 133  Q
    ||||||||    
T  22221459 tttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 22227701 - 22227808
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||| || ||||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  || ||||||||||||    
T  22227701 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcac 22227800  T
Q  126 tttagcct 133  Q
    ||||||||    
T  22227801 tttagcct 22227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 38974898 - 38974795
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  38974898 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 38974799  T
Q  129 agcc 132  Q
    ||||    
T  38974798 agcc 38974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 39005996 - 39005893
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  39005996 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 39005897  T
Q  129 agcc 132  Q
    ||||    
T  39005896 agcc 39005893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 18978122 - 18978029
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 123  Q
    ||||| ||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||||||||||||    
T  18978122 tgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 22220494 - 22220388
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||||| |||||||||||||||||||||||| ||  ||||||  ||||||||||||  ||| |||||||  |||||||||||||||    
T  22220494 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcac 22220395  T
Q  126 tttagcc 132  Q
    |||||||    
T  22220394 tttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 30335745 - 30335638
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| |||||||  ||||||||| |||||||| |||| |  ||||||||||||| |||| |||||||| || |||||| |||||    
T  30335745 agatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcac 30335646  T
Q  126 tttagcct 133  Q
    ||||||||    
T  30335645 tttagcct 30335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 43661818 - 43661925
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||| |||| ||||| ||||||||||||||| |||||||||||  ||| |||  ||||||||||  ||||||||||||| || ||||||||||||    
T  43661818 agatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcac 43661917  T
Q  126 tttagcct 133  Q
    || |||||    
T  43661918 ttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 1823648 - 1823551
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| |||||| || ||||||||||||||||| |||| ||  |||||||||||| |||| |||||||| |||| |||||| |||||||||||    
T  1823648 gggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 1858093 - 1857996
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| |||||| || ||||||||||||||||| |||| ||  |||||||||||| |||| |||||||| |||| |||||| |||||||||||    
T  1858093 gggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 32968560 - 32968455
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||||||||||||||||    
T  32968560 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactt 32968461  T
Q  128 tagcct 133  Q
    ||||||    
T  32968460 tagcct 32968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 40471156 - 40471244
Alignment:
Q  40 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||| || ||||| |||||||||||||||||||||| || |||||||||| ||| |||| |||||||| |||||||||||||||||||    
T  40471156 taaatcttaaggggctaaaattgtagtttttgtatttatgg-accaaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 8388564 - 8388463
Alignment:
Q  30 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||  |||||| | ||||||||||  |||| |||||||  ||||| |||||||||||||    
T  8388564 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcacttta 8388467  T
Q  130 gcct 133  Q
    ||||    
T  8388466 gcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 11282111 - 11282011
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||| |||||| ||||||| |||||||||  ||||||||| |||||| ||||||||||||  |||| |||||||| |||| |||||||||||||    
T  11282111 tgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttt 11282012  T
Q  129 a 129  Q
    |    
T  11282011 a 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 32207320 - 32207425
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| | ||||||||| || | |||||||||||||||||||||| ||||||   |||||||||||| ||||||| ||||  ||||| |||||||||    
T  32207320 agatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcac 32207417  T
Q  126 tttagcct 133  Q
    ||||||||    
T  32207418 tttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 43661371 - 43661267
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||  || ||||||||||||| ||  |||| ||| |||| ||  |||||||||||    
T  43661371 agatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcac 43661272  T
Q  126 tttag 130  Q
    |||||    
T  43661271 tttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 8389693 - 8389787
Alignment:
Q  35 ggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||| |||||| |||||| | ||||||||||||||||||  || ||||||||||||||||  |||||||| ||||  ||||||||||||||||||    
T  8389693 ggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 32973933 - 32974037
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||| ||||||||||||    
T  32973933 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactt 32974032  T
Q  128 tagcc 132  Q
    |||||    
T  32974033 tagcc 32974037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 24488678 - 24488756
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    ||||||||||||||||| || ||||| |||||||| |||||  |||||||||| ||||||||||||| ||||||||||||    
T  24488678 tgcaatggggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagtta 24488756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 11287861 - 11287779
Alignment:
Q  47 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||| |||| |||||||  || | ||||||||||||||    
T  11287861 tagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 18971013 - 18970920
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 123  Q
    ||||| |||| |||||| |  |||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||||||||||||    
T  18971013 tgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 45114537 - 45114618
Alignment:
Q  52 ggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||| ||||  ||| | |||||||||||||| ||||||||||||  || |||||||||||||| |||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 18488257 - 18488325
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaa 94  Q
    |||||||| |||| || ||| ||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  18488257 agatgcaaaggggttatatcttagagggccaaaattgtagtttttgtatataggggactaaaattgcaa 18488325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 24122976 - 24122882
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||| |||||| | |||||| ||||||||||| |||||||  |||||||||||  |||| |||||| | ||||||||| |||||||||||||    
T  24122976 gctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcct 24122882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 24123893 - 24123975
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    |||||||| ||||||||||| |||| ||| ||||||||| |||| ||| ||| | | ||||||||||||| ||||||||||||    
T  24123893 agatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagtta 24123975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 610 - 719
Target Start/End: Original strand, 33892692 - 33892802
Alignment:
Q  610 aagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaataatcccatca-acaatgtatgtaataacatg 708  Q
    ||||||||||||||| | |||| | |||||||||| | ||||||||  || ||||||||||||||||| ||| ||| || ||||  | ||||||||||||    
T  33892692 aagggaatctaaaatacagaagaccatgtatgtccctctaaaaatcttgcctaagaaaaataggtaaagaattccaccagacaacatttgtaataacatg 33892791  T
Q  709 accatgactag 719  Q
    ||||| |||||    
T  33892792 accataactag 33892802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 11456715 - 11456679
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattg 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  11456715 agatgcaatggggctaaatcatagggggccaaaattg 11456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 677
Target Start/End: Original strand, 14164355 - 14164427
Alignment:
Q  605 gaacgaagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaa 677  Q
    |||| ||||||||||||||||| | || |  ||||||||||||||||||||| || ||| |||||||||||||    
T  14164355 gaactaagggaatctaaaattcagtagaccgtgtatgtccttgtaaaaatcctgcctaaaaaaaataggtaaa 14164427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 739 - 839
Target Start/End: Original strand, 14164474 - 14164574
Alignment:
Q  739 gaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggacttgatagagttcttttttct 838  Q
    ||||| ||||||| ||| ||||| ||||||||||||   ||||||||||||||||| ||||||  | ||||||||   ||| |||| |||||||||||||    
T  14164474 gaagcatctaatattccaatagaagaccttcattgagaaagaggagtaattgcacctttagaccggattttgtaggacactcgatatagttcttttttct 14164573  T
Q  839 g 839  Q
    |    
T  14164574 g 14164574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 11283207 - 11283310
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||  |||||| ||||||||||  ||||| ||  |||||| | |||||| |||  ||||||||||||| ||||| ||| ||||||||    
T  11283207 tgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttt 11283306  T
Q  129 agcc 132  Q
    ||||    
T  11283307 agcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 30336507 - 30336602
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||| ||| |||  |||||||||||||||||| ||||| | | ||||||  ||| ||||||||||||  |||| | |||||||||||||||    
T  30336507 ggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 30568992 - 30568886
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||  ||||||| |||||||||||  || | || |||||||| ||  |||||||| |||  ||||| |||||||||    
T  30568992 agatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaacttagaggggg-aaagtgcac 30568894  T
Q  126 tttagcct 133  Q
    ||||||||    
T  30568893 tttagcct 30568886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 42982676 - 42982759
Alignment:
Q  50 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||| |||||||||||||||||| |  ||||| |||||||| |||  |||| ||| |||| || ||||||||||||||||||||    
T  42982676 ggggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcct 42982759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 24483201 - 24483143
Alignment:
Q  74 tttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||| ||||||||||||| |||||||| |||   |||||||||||||||||||||    
T  24483201 tttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 36249601 - 36249552
Alignment:
Q  83 ccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||||||  |||||||| |||| ||||||||||||||||||||||    
T  36249601 ccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 29043504 - 29043400
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||| ||| ||||||||||| ||| |||  ||||||||||||||||||  ||||||  |||||| || |  ||||||| ||||| || ||||||||| ||    
T  29043504 agatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaac 29043405  T
Q  126 tttag 130  Q
    |||||    
T  29043404 tttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 5003103 - 5003198
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagttttt-gtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| |||||| | |||||||| |||||| ||| |||||||   ||||||||||| ||||||||||||  ||||| ||||||| |||||||||    
T  5003103 gggctaaatcttaggggac-aaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagtta--ggggggaaagtgcgctttagcct 5003198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 23170034 - 23170098
Alignment:
Q  66 tttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||| |||||||| |||||||||||| |||||||| |||  ||||| ||| ||||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaatta--ggggggaaaatgcactttagcc 23170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 335
Target Start/End: Complemental strand, 23842790 - 23842731
Alignment:
Q  276 gaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    |||||||||| | |||||||||||| |||||||| || ||||| ||||||||||| ||||    
T  23842790 gaaaaggaaccgttatgtggtaattaaaagaaaatatcataataaaaaggaactgatata 23842731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 5514294 - 5514371
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||||||||  | | ||||||||||| |||| ||| || | |||  ||||||||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaagtgcactttagcct 5514371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 11456694 - 11456637
Alignment:
Q  76 taggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||| ||||||||||||  |||||||| |||  ||| |||||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcct 11456637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 24359902 - 24359865
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtat 74  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  24359902 ggctaaatcttagggggtcaaaattgtagtttttgtat 24359865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 7e-30; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 7316289 - 7316396
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| || |||||||||||||| ||||   |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  7316289 agatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 7316388  T
Q  126 tttagcct 133  Q
    ||||||||    
T  7316389 tttagcct 7316396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 8659368 - 8659264
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  8659368 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 8659269  T
Q  129 agcct 133  Q
    |||||    
T  8659268 agcct 8659264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 8821976 - 8821872
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||| |||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  8821976 tgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 8821877  T
Q  129 agcct 133  Q
    |||||    
T  8821876 agcct 8821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 7314985 - 7314880
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||| ||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  7314985 agatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 7314887  T
Q  126 tttagcc 132  Q
    |||||||    
T  7314886 tttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 1829598 - 1829701
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| || |||||||  |||||||||||| |||| |||||||  |||  ||||||||||    
T  1829598 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcac 1829697  T
Q  126 ttta 129  Q
    ||||    
T  1829698 ttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 8822791 - 8822894
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||| |||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||| | ||||||||||||||||    
T  8822791 tgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcacttt 8822890  T
Q  129 agcc 132  Q
    ||||    
T  8822891 agcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 16704521 - 16704599
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||| |||||||  |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  16704521 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcct 16704599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 10784696 - 10784591
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgg-gggaaaagtgcactt 127  Q
    ||||| ||||||||||| | |||||||||||||||||||||| || |||||||   ||||||||||| |||| |||||||| || |||||||||||||||    
T  10784696 tgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactt 10784597  T
Q  128 tagcct 133  Q
    ||||||    
T  10784596 tagcct 10784591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 3721715 - 3721611
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| || |||| | ||||| | ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  3721715 tgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 3721616  T
Q  129 agcct 133  Q
    |||||    
T  3721615 agcct 3721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 14822463 - 14822359
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||| | ||||||| |||||||||||||||||||||| | || ||| ||| ||||||||||||| |||||||| |||| ||| |||||||||||| |    
T  14822463 tgcaatgagactaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactct 14822364  T
Q  129 agcct 133  Q
    |||||    
T  14822363 agcct 14822359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 27437931 - 27437827
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| || |||||||| ||||||| |||||||||||||||| | | |||||| ||||||||||||  |||| |||||||| ||| ||||||||||||||    
T  27437931 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttt 27437832  T
Q  129 agcct 133  Q
    |||||    
T  27437831 agcct 27437827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 8660202 - 8660305
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||| |||||||| ||||||| | ||||||| ||||| ||| ||||||| | ||||||||||| ||||||||||||   |||||||||||||||||    
T  8660202 tgcaatggagctaaatcttaggggggctaaattgtggttttggtacttaggggtc-aaaattgcaagtttttgaaagttaggaggggaaaagtgcacttt 8660300  T
Q  129 agcct 133  Q
    |||||    
T  8660301 agcct 8660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 34834577 - 34834677
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| |||||  || ||||| || |||||||||||| ||||||||||||  | ||||||||||||||||    
T  34834577 tgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttt 34834676  T
Q  129 a 129  Q
    |    
T  34834677 a 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 27322067 - 27322169
Alignment:
Q  30 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||| |||||||| || |||||||  |||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||    
T  27322067 gcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 27322165  T
Q  130 gcct 133  Q
    ||||    
T  27322166 gcct 27322169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 16703652 - 16703570
Alignment:
Q  47 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||| ||||||||||||||||||||||  ||| |||||||||||| ||||||||| ||  ||||||||||||||||||||||    
T  16703652 tagggggctaaaattgtagtttttgtattta-tggatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagcc 16703570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 14823583 - 14823678
Alignment:
Q  39 ctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggg-gaaaagtgcactttagcct 133  Q
    ||||||| |||||||||||||||||||||| |||| ||| ||| | ||||||||||| |||| ||| |||| ||||  ||||||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcct 14823678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 6842308 - 6842385
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||||||||| |  |||||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcct 6842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 22536071 - 22536014
Alignment:
Q  276 gaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgcta 333  Q
    |||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  22536071 gaaaaggaagtgctatgtggtaactgaaagaaaaaataataatgaaaaggaactgcta 22536014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 26575063 - 26575131
Alignment:
Q  40 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    |||||| ||||||||||||||||||||||||||| ||| |||   ||||||||||| ||||||||||||    
T  26575063 taaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 3722533 - 3722609
Alignment:
Q  57 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcct 3722609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 6840298 - 6840193
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||  |||||| ||| ||| ||||||| ||||||||||||||| ||| ||||||| ||||  |||||||| ||||  |||| |||||||||    
T  6840298 agatgcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaa--gggggaaagtgcac 6840201  T
Q  126 tttagcct 133  Q
    || |||||    
T  6840200 ttcagcct 6840193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 26574721 - 26574618
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| || |||  |||||| |||||||||||| |||| ||  |||||||||||| ||||||||||||  || || ||| ||||||||    
T  26574721 tgcaaaggggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcacttt 26574623  T
Q  129 agcct 133  Q
    |||||    
T  26574622 agcct 26574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 837
Target Start/End: Original strand, 28299189 - 28299305
Alignment:
Q  721 cttatcagcacaagcttcgaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggactt 820  Q
    |||| ||| |||||| || |||||||||| | ||| ||||| ||||||||||||    ||||||||||| ||||||||||  ||||||| |||   |||     
T  28299189 cttaacagtacaagcatcaaagcctctaaaattccaatagaagaccttcattgagtaggaggagtaattacacccttagatcaggttttttaggaaactc 28299288  T
Q  821 gatagagttcttttttc 837  Q
    |||||||||||||||||    
T  28299289 gatagagttcttttttc 28299305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 837
Target Start/End: Complemental strand, 28512884 - 28512768
Alignment:
Q  721 cttatcagcacaagcttcgaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggactt 820  Q
    |||| ||| |||||| || |||||||||| | ||| ||||| ||||||||||||    ||||||||||| ||||||||||  ||||||| |||   |||     
T  28512884 cttaacagtacaagcatcaaagcctctaaaattccaatagaagaccttcattgagtaggaggagtaattacacccttagatcaggttttttaggaaactc 28512785  T
Q  821 gatagagttcttttttc 837  Q
    |||||||||||||||||    
T  28512784 gatagagttcttttttc 28512768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 10041174 - 10041224
Alignment:
Q  279 aaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaact 329  Q
    ||||||| | |||||||| ||||||||||||||||||||| ||||||||||    
T  10041174 aaggaactgttatgtggttattgaaagaaaaaataataatgaaaaggaact 10041224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 27318389 - 27318314
Alignment:
Q  57 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaa-gtgcactttagcct 133  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--gggggaaaaggtgcactttagcct 27318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 30495702 - 30495797
Alignment:
Q  36 gggctaaatcatag-ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||||| ||| ||||||||||||||  ||||||||  |||||||  ||||| ||||  ||||||||||||  |||| |||||||||||||||||    
T  30495702 gggctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtta--ggggaaaaagtgcactttagcc 30495797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 3333024 - 3333128
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||  ||| |||  ||||||||||||||||||  |||||| ||||||| ||||  |||| ||| |||   ||||||||||||| |||    
T  3333024 tgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaattt 3333123  T
Q  129 agcct 133  Q
    |||||    
T  3333124 agcct 3333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 29473158 - 29473082
Alignment:
Q  51 gggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||||||||||  |||||||   ||||| |||||||||||||  |||| ||| |||| |||||||||||||||||    
T  29473158 gggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 10785911 - 10785990
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    ||||| ||||||||||| || ||||  |||||||||||||||||| |||||||   ||||||||||  |||| |||||||    
T  10785911 tgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtta 10785990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 28299032 - 28299087
Alignment:
Q  484 taggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 539  Q
    |||||| ||||||||||| |||||   || ||||||||||||||||||||||||||    
T  28299032 taggttgacaccccgaagttgctcccatcatctaccacctgctctgaaattttatt 28299087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 28513041 - 28512986
Alignment:
Q  484 taggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 539  Q
    |||||| ||||||||||| |||||   || ||||||||||||||||||||||||||    
T  28513041 taggttgacaccccgaagttgctcccatcatctaccacctgctctgaaattttatt 28512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 26717137 - 26717183
Alignment:
Q  84 caaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 130  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||||    
T  26717137 caaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 34831005 - 34830927
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtt 107  Q
    ||||||| ||||||||| ||||||| | ||||||| ||||| ||| ||||||| |||||  |||||  |||||||||||    
T  34831005 tgcaatgtggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaagtt 34830927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 2961596 - 2961551
Alignment:
Q  290 atgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||    
T  2961596 atgtggtaattgaatgaaaaaataataacgaaaaggaactgttata 2961551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 5658852 - 5658759
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    |||||||||| || |||  |||||||||||||||||||  ||||| || ||||||  ||  |||| ||| |||| ||||||||| |||||||||    
T  5658852 gggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 61454 - 61559
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||| |||||||| |||| || ||||||||||||    
T  61454 agatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcac 61553  T
Q  126 tttagc 131  Q
    ||||||    
T  61554 tttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 60196 - 60090
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||||||||||| |||||||||||||||| ||  ||||||  |||||||||||| |||| |||||||  || ||||||||||||    
T  60196 agatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcac 60097  T
Q  126 tttagcc 132  Q
    |||||||    
T  60096 tttagcc 60090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 4e-28; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 31659726 - 31659622
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgcactt 127  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||| ||| ||||||||||||  ||||| ||||||||||||    
T  31659726 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactt 31659627  T
Q  128 tagcc 132  Q
    |||||    
T  31659626 tagcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 7500560 - 7500454
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||||||||||||||| |||| | || |||| ||| |||||||||||| ||||||||||||| |||||||||||||||    
T  7500560 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaa-gggggaaaagtgcac 7500462  T
Q  126 tttagcct 133  Q
    ||||||||    
T  7500461 tttagcct 7500454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 18371518 - 18371424
Alignment:
Q  38 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  18371518 gctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 3227592 - 3227696
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||  | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  3227592 tgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 3227691  T
Q  129 agcct 133  Q
    |||||    
T  3227692 agcct 3227696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 22630458 - 22630554
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||| |||| |||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  22630458 ggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcct 22630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 31949800 - 31949904
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||  | ||||||| ||||| ||||||||||| ||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  31949800 tgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcacttt 31949899  T
Q  129 agcct 133  Q
    |||||    
T  31949900 agcct 31949904  T

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Target: chr7; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 7501847 - 7501954
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||| ||| || |||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  7501847 agatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 7501946  T
Q  126 tttagcct 133  Q
    ||||||||    
T  7501947 tttagcct 7501954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 14999150 - 14999249
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||| || | |||||||||||||||    
T  14999150 agatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaa-gttttgaaaatt-aggggggaaaagtgcac 14999247  T

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Target: chr7; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 17782558 - 17782655
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 17782655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 127438 - 127336
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||| |||||||||| |||||||| ||| |||| ||||| ||| ||||||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  127438 tgcaattgggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttt 127341  T
Q  129 agcct 133  Q
    |||||    
T  127340 agcct 127336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 21505520 - 21505415
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| || |||| |||||||||||||||||||| | |||| ||||||| ||||  ||||||||||||  |||||||||||||||    
T  21505520 agatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcac 21505423  T
Q  126 tttagcct 133  Q
    ||||||||    
T  21505422 tttagcct 21505415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 22629592 - 22629482
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa---tgggggaaaagtg 122  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||||| ||||    ||||||||| ||    
T  22629592 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatg 22629493  T
Q  123 cactttagcct 133  Q
    |||||||||||    
T  22629492 cactttagcct 22629482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 31949425 - 31949321
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| |||  | ||||||||||||||||    
T  31949425 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttt 31949326  T
Q  129 agcct 133  Q
    |||||    
T  31949325 agcct 31949321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 42886281 - 42886384
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||||| |||||||| ||||||||||||||||||||||||||  |||||||||||  ||||||||||||   || |||||||||||    
T  42886281 agatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcac 42886380  T
Q  126 ttta 129  Q
    ||||    
T  42886381 ttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 47525365 - 47525468
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| ||||||| | ||||||| |||||  || ||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||    
T  47525365 tgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 47525464  T
Q  129 agcc 132  Q
    ||||    
T  47525465 agcc 47525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 18372452 - 18372530
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 104  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  18372452 agatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaa 18372530  T

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Target: chr7; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 17781764 - 17781663
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  17781764 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 17781665  T
Q  129 ag 130  Q
    ||    
T  17781664 ag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 11658457 - 11658378
Alignment:
Q  54 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||||  |||||| | ||||||||| | ||||||||||||| |||||||||||||| ||||||||    
T  11658457 ccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcct 11658378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 3227210 - 3227109
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||| || |||| | ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| || | ||||| ||||||||||||    
T  3227210 tgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcacttt 3227112  T
Q  129 agc 131  Q
    |||    
T  3227111 agc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 128599 - 128699
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||||||| |||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||  ||||||||||||  | ||||||||||||||||    
T  128599 tgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttt 128698  T
Q  129 a 129  Q
    |    
T  128699 a 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 11662549 - 11662649
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| |||||||| || | ||||||||||||| |||||||||||  ||| |  | ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  11662549 tgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttt 11662648  T
Q  129 a 129  Q
    |    
T  11662649 a 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 47369887 - 47369780
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| ||||||||||| || |||||||||||| ||||||||||| ||| | | | ||||||||||| ||||||||||||  ||   |||||||||     
T  47369887 agatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcat 47369788  T
Q  126 tttagcct 133  Q
    ||||||||    
T  47369787 tttagcct 47369780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 34174010 - 34174084
Alignment:
Q  58 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||| ||||| ||| ||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 34174084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  58 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 20163585 - 20163658
Alignment:
Q  60 ttgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||  |||||  ||||||||||||| ||||||||||||  || ||| ||||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 34352795 - 34352888
Alignment:
Q  40 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||| ||| ||||||||||| |||||| |||| ||| ||||||||||| | ||| |||||||| |||  || | ||||||||||||||||||    
T  34352795 taaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcct 34352888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 48934927 - 48935004
Alignment:
Q  55 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||| ||||||||||| |||| ||  ||||||| |||| ||||||||||||  || |||||| ||||||||||||    
T  48934927 caaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 10024277 - 10024329
Alignment:
Q  275 tgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaa 327  Q
    ||||||||||| ||||||| ||||  |||||||||||||||||| ||||||||    
T  10024277 tgaaaaggaactgctatgtcgtaaccgaaagaaaaaataataataaaaaggaa 10024329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 30439356 - 30439459
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| |||||| | |||||||||||||||| |  ||||  | |||||| | ||  ||||||||||||| ||||  ||||||||||||    
T  30439356 tgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaagttaa-ggggagaaagtgcacttt 30439454  T
Q  129 agcct 133  Q
    |||||    
T  30439455 agcct 30439459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 43899525 - 43899469
Alignment:
Q  53 gccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 109  Q
    |||||||||||| ||||| |||||||  || |||||||||||| |||||||||||||    
T  43899525 gccaaaattgtaatttttatatttagaagatcaaaattgcaagtttttgaaagttaa 43899469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 10024334 - 10024380
Alignment:
Q  289 tatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    |||||| |||||||||||| |||||||||| |||| |||||||||||    
T  10024334 tatgtgataattgaaagaataaataataatgaaaatgaactgctata 10024380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 14998086 - 14998048
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgta 64  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  14998086 agatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 15681651 - 15681594
Alignment:
Q  76 taggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||||||| ||||  |||| ||| |||||||| ||||||| |||||||||||    
T  15681651 taggggaccaaaatcgcaactttttaaaacttaatgggtgaaaagttcactttagcct 15681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 19594 - 19487
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    |||||||| |||| |||||| ||||||  |||||||||||||||| || ||||||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  19594 agatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcac 19495  T
Q  126 tttagcct 133  Q
    ||||||||    
T  19494 tttagcct 19487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 337 - 233
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||| |||||||| || |||||| |||||||| |||||||||||  |||||||||||||||||||  ||||||||||||| ||||| |||||||||||    
T  337 atgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactt 238  T
Q  128 tagcc 132  Q
    |||||    
T  237 tagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 975 - 1056
Alignment:
Q  28 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 109  Q
    |||||| |||||||| || | ||||||||||||| |||||||||||  || ||||||||||||||||  |||| ||||||||    
T  975 atgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaa 1056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 17553 - 17469
Alignment:
Q  49 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  17553 gggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcct 17469  T

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Target: scaffold0302; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 18774 - 18877
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||||  || |||||||||||| |||||||||||  |||||||||||||||||||  |||| |||||||   ||| |||||||||||||    
T  18774 tgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcacttt 18873  T
Q  129 agcc 132  Q
    ||||    
T  18874 agcc 18877  T

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Target: scaffold0294 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 5439 - 5540
Alignment:
Q  32 aatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 131  Q
    |||||||||||||| || |||| ||||||||||||||||||| ||| |||  |||||||||||| |||||||| |||  |||||||||||||||||||||    
T  5439 aatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagc 5538  T
Q  132 ct 133  Q
    ||    
T  5539 ct 5540  T

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Target: scaffold0294; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 4542 - 4441
Alignment:
Q  32 aatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 131  Q
    |||||||||||||  |||||||  ||||||||| |||||||| ||| ||| | ||||||| ||| |||||||| |||  |||| ||| ||||||||||||    
T  4542 aatggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagc 4443  T
Q  132 ct 133  Q
    ||    
T  4442 ct 4441  T

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Target: scaffold0227 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 117 - 220
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  117 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 216  T
Q  129 agcc 132  Q
    ||||    
T  217 agcc 220  T

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Target: scaffold0003 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 49431 - 49535
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| || |||||||| ||||||| |||||||||||||||| | | |||||| ||||||||||||  |||| |||||||| ||| ||||||||||||||    
T  49431 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttt 49530  T
Q  129 agcct 133  Q
    |||||    
T  49531 agcct 49535  T

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Target: scaffold0632 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 3306 - 3409
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| |||||| |||||||| |||||||||||  || |||  |||||||| ||| ||||||||| ||| ||||||||||||||||||    
T  3306 tgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcacttt 3404  T
Q  129 agcct 133  Q
    |||||    
T  3405 agcct 3409  T

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Target: scaffold0093 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 2463 - 2564
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaag-gttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||||  |||||||| |||||||||||||| || ||||||||| |||||||  ||||||||||||  ||||||||||||  |||||||||||||||||    
T  2463 tgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactt 2560  T
Q  128 tagc 131  Q
    ||||    
T  2561 tagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 7086 - 7187
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaag-gttttgaaagttaatgggggaaaagtgcactt 127  Q
    |||||||  |||||||| |||||||||||||| || ||||||||| |||||||  ||||||||||||  ||||||||||||  |||||||||||||||||    
T  7086 tgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactt 7183  T
Q  128 tagc 131  Q
    ||||    
T  7184 tagc 7187  T

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Target: scaffold1303 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 1545 - 1438
Alignment:
Q  26 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 125  Q
    ||||||||  |||||||||| ||||||| ||||||| |||||||| ||  ||||||  |||||||||||| |||| |||||||  ||||||||||| |||    
T  1545 agatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacac 1446  T
Q  126 tttagcct 133  Q
    ||||||||    
T  1445 tttagcct 1438  T

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Target: scaffold0112 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 37248 - 37148
Alignment:
Q  31 caatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgc-aaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| |||||||  ||||||||| ||  |||| |||| ||  |||||||||||||||||||    
T  37248 caatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata--gggggaaaagtgcacttta 37151  T
Q  130 gcc 132  Q
    |||    
T  37150 gcc 37148  T

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Target: scaffold0186 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 23182 - 23081
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||||||||||||| | ||||||  ||| ||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  23182 tgcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttt 23085  T
Q  129 agcc 132  Q
    ||||    
T  23084 agcc 23081  T

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Target: scaffold0186; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 23887 - 23992
Alignment:
Q  29 tgcaatggggctaaatc--atagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcact 126  Q
    |||||||||||||||||  ||||||||  ||| |||| |||||  |||||||||  ||||||||||||| ||||||||||||  | |  |||||||||||    
T  23887 tgcaatggggctaaatcctataggggga-aaagttgttgttttgatatttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcact 23985  T
Q  127 ttagcct 133  Q
    |||||||    
T  23986 ttagcct 23992  T

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Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 4728 - 4829
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    |||||||||||||||   ||| ||| |||||||||||||| |||||||||||| ||||||||||| | |||| |||||| | || || ||||||||||||    
T  4728 tgcaatggggctaaaatttagagggtcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcacttt 4826  T
Q  129 agc 131  Q
    |||    
T  4827 agc 4829  T

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Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 3778 - 3699
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 108  Q
    ||||||| ||||||||| |||||| | |||||| |||||| | || | ||||| ||||||||||||| ||||||||||||    
T  3778 tgcaatgcggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

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Target: scaffold0586 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 6438 - 6346
Alignment:
Q  37 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 129  Q
    ||||||||| ||||||| |||||||||||||||||||  |||||| | ||||| | ||  |||||||| |||| || ||||||||||||||||    
T  6438 ggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

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Target: scaffold0586; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 9032 - 9127
Alignment:
Q  36 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 133  Q
    |||||||||| |||||| ||||||||||||||||||||  |||| | | |||||  |||  |||||||| |||| | || ||||||||||||||||||    
T  9032 gggctaaatcttagggg-ccaaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaa-ttaaggaggaaaaagtgcactttagcct 9127  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 7413 - 7517
Alignment:
Q  29 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 128  Q
    ||||| ||||||||||| ||||||| |||||||||||||| ||||  ||||||  |||||| | ||  |||| ||| |||  |||||| |||||||||||    
T  7413 tgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcacttt 7512  T
Q  129 agcct 133  Q
    |||||    
T  7513 agcct 7517  T

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Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 49109 - 49185
Alignment:
Q  56 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 132  Q
    ||||||||||||||  || ||||| | ||||||||||||| |||| |||||||| || ||||||||||| |||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

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Target: scaffold0642 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 8401 - 8341
Alignment:
Q  274 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    ||||||| |||| | |||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  8401 atgaaaaagaaccgttatgtggtaattaaaagaaaaa-taataatgaaaaggaactgctata 8341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 18314 - 18254
Alignment:
Q  274 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    ||||||| |||| | |||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  18314 atgaaaaagaaccgttatgtggtaattaaaagaaaaa-taataatgaaaaggaactgctata 18254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 20668 - 20728
Alignment:
Q  274 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 335  Q
    ||||||| |||| | |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  20668 atgaaaaagaaccgttatgtggtaattaaaagaaaa-ataataatgaaaaggaactgctata 20728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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