View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0622_low_6 (Length: 928)

Name: NF0622_low_6
Description: NF0622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0622_low_6
NF0622_low_6
[»] chr1 (53 HSPs)
chr1 (647-826)||(15375024-15375206)
chr1 (353-527)||(15374746-15374919)
chr1 (17-121)||(24422799-24422903)
chr1 (28-121)||(11437208-11437301)
chr1 (14-120)||(51684366-51684472)
chr1 (17-117)||(24426073-24426173)
chr1 (17-121)||(52274967-52275071)
chr1 (17-120)||(39699765-39699867)
chr1 (14-121)||(11436041-11436148)
chr1 (17-120)||(41364829-41364931)
chr1 (14-121)||(51685760-51685867)
chr1 (14-120)||(45148581-45148686)
chr1 (16-121)||(23980463-23980568)
chr1 (17-121)||(35067000-35067104)
chr1 (17-121)||(52827346-52827450)
chr1 (14-117)||(37526873-37526975)
chr1 (14-117)||(45149965-45150068)
chr1 (17-117)||(52828068-52828168)
chr1 (260-323)||(15373868-15373931)
chr1 (25-120)||(36613910-36614005)
chr1 (14-117)||(39153111-39153214)
chr1 (14-120)||(39222468-39222575)
chr1 (17-121)||(12389980-12390083)
chr1 (17-121)||(33088615-33088719)
chr1 (14-121)||(36612852-36612958)
chr1 (14-117)||(43378708-43378810)
chr1 (14-121)||(45157204-45157310)
chr1 (14-117)||(50680335-50680437)
chr1 (43-121)||(14999284-14999361)
chr1 (40-121)||(39698562-39698643)
chr1 (25-121)||(44404441-44404537)
chr1 (17-117)||(52276161-52276261)
chr1 (14-121)||(7675454-7675560)
chr1 (14-121)||(35594216-35594321)
chr1 (14-117)||(43058789-43058891)
chr1 (43-121)||(11190384-11190462)
chr1 (376-465)||(2129343-2129431)
chr1 (17-117)||(7983053-7983152)
chr1 (17-121)||(41366129-41366232)
chr1 (14-117)||(39151934-39152037)
chr1 (26-121)||(43060013-43060108)
chr1 (43-121)||(7674527-7674603)
chr1 (42-120)||(50681627-50681705)
chr1 (14-121)||(35595187-35595295)
chr1 (47-121)||(14999983-15000057)
chr1 (44-121)||(16290092-16290170)
chr1 (14-92)||(25652742-25652820)
chr1 (14-117)||(40384727-40384831)
chr1 (44-83)||(44411991-44412030)
chr1 (286-320)||(2129470-2129504)
chr1 (261-311)||(2129521-2129571)
chr1 (593-626)||(15374986-15375019)
chr1 (17-82)||(46524578-46524642)
[»] chr5 (36 HSPs)
chr5 (14-121)||(19752911-19753017)
chr5 (14-121)||(19754125-19754233)
chr5 (14-121)||(25523068-25523175)
chr5 (14-121)||(18486897-18487004)
chr5 (17-121)||(40255670-40255774)
chr5 (17-121)||(5778834-5778938)
chr5 (17-121)||(28538675-28538779)
chr5 (38-120)||(22940641-22940723)
chr5 (14-121)||(16650850-16650957)
chr5 (14-121)||(25055411-25055518)
chr5 (17-121)||(5777900-5778002)
chr5 (24-117)||(20216768-20216861)
chr5 (24-121)||(33160291-33160388)
chr5 (17-121)||(36486486-36486590)
chr5 (14-117)||(24332916-24333019)
chr5 (20-120)||(25056382-25056482)
chr5 (14-117)||(42195137-42195238)
chr5 (14-96)||(2686396-2686478)
chr5 (38-120)||(20214196-20214277)
chr5 (17-117)||(28539818-28539917)
chr5 (43-120)||(1796054-1796131)
chr5 (25-121)||(7311589-7311685)
chr5 (17-121)||(18154493-18154595)
chr5 (14-121)||(18485137-18485251)
chr5 (35-121)||(25524143-25524230)
chr5 (38-121)||(33158097-33158180)
chr5 (45-121)||(5730440-5730517)
chr5 (14-79)||(25524093-25524158)
chr5 (17-118)||(36485302-36485403)
chr5 (26-120)||(5962579-5962671)
chr5 (44-117)||(2685749-2685820)
chr5 (17-97)||(1797295-1797375)
chr5 (14-70)||(16650042-16650098)
chr5 (17-121)||(21835040-21835143)
chr5 (14-121)||(42196195-42196302)
chr5 (46-96)||(34893689-34893739)
[»] chr2 (41 HSPs)
chr2 (19-121)||(7899882-7899984)
chr2 (17-121)||(22848190-22848294)
chr2 (17-121)||(38840491-38840595)
chr2 (17-121)||(38839241-38839345)
chr2 (14-121)||(23869530-23869636)
chr2 (37-121)||(36449777-36449861)
chr2 (14-120)||(18299373-18299479)
chr2 (17-117)||(7898694-7898794)
chr2 (17-121)||(11258809-11258913)
chr2 (14-121)||(18904366-18904473)
chr2 (14-121)||(22587949-22588055)
chr2 (37-117)||(36450939-36451018)
chr2 (17-120)||(41878092-41878197)
chr2 (17-121)||(41879210-41879314)
chr2 (25-120)||(1034475-1034570)
chr2 (38-121)||(18906006-18906089)
chr2 (26-119)||(13030293-13030383)
chr2 (14-119)||(18300720-18300822)
chr2 (43-121)||(18868923-18869001)
chr2 (17-121)||(11257621-11257724)
chr2 (14-121)||(18797245-18797353)
chr2 (26-121)||(11938796-11938890)
chr2 (43-117)||(13567975-13568049)
chr2 (598-707)||(17906192-17906302)
chr2 (14-96)||(22587525-22587606)
chr2 (14-96)||(28617946-28618027)
chr2 (26-96)||(24475248-24475318)
chr2 (16-121)||(802588-802692)
chr2 (376-447)||(10928068-10928137)
chr2 (37-121)||(13570575-13570659)
chr2 (38-120)||(24476863-24476943)
chr2 (37-96)||(32739647-32739706)
chr2 (17-119)||(1033212-1033312)
chr2 (43-121)||(16446153-16446231)
chr2 (14-119)||(26545516-26545621)
chr2 (17-121)||(1093144-1093247)
chr2 (376-456)||(40140342-40140422)
chr2 (63-121)||(21837299-21837355)
chr2 (16-92)||(810778-810854)
chr2 (270-322)||(10928182-10928234)
chr2 (17-117)||(8535654-8535752)
[»] chr4 (46 HSPs)
chr4 (17-121)||(52491605-52491709)
chr4 (14-121)||(1290193-1290300)
chr4 (17-120)||(10471386-10471489)
chr4 (17-117)||(8758835-8758935)
chr4 (17-121)||(25685820-25685924)
chr4 (23-121)||(49308032-49308128)
chr4 (17-118)||(19750573-19750673)
chr4 (17-118)||(19789133-19789233)
chr4 (17-121)||(1963195-1963299)
chr4 (14-117)||(12129626-12129729)
chr4 (23-121)||(17388215-17388312)
chr4 (14-117)||(8155741-8155843)
chr4 (17-121)||(8757674-8757777)
chr4 (17-121)||(10470545-10470649)
chr4 (37-121)||(17382992-17383075)
chr4 (17-121)||(31599788-31599892)
chr4 (17-117)||(35935531-35935631)
chr4 (17-121)||(48780247-48780351)
chr4 (14-121)||(1835097-1835204)
chr4 (17-120)||(25684934-25685037)
chr4 (16-121)||(3928855-3928960)
chr4 (17-117)||(35934347-35934445)
chr4 (17-121)||(5526124-5526227)
chr4 (24-120)||(31600990-31601086)
chr4 (17-121)||(48781044-48781147)
chr4 (24-121)||(26421627-26421723)
chr4 (17-121)||(5525359-5525462)
chr4 (14-120)||(1834119-1834226)
chr4 (14-120)||(10447006-10447113)
chr4 (17-121)||(13386013-13386119)
chr4 (17-121)||(13386530-13386635)
chr4 (6-121)||(13509346-13509460)
chr4 (25-120)||(33310095-33310187)
chr4 (14-110)||(21539066-21539162)
chr4 (37-117)||(55603549-55603628)
chr4 (14-117)||(1289100-1289203)
chr4 (14-121)||(10448255-10448362)
chr4 (42-120)||(1964464-1964542)
chr4 (24-121)||(3927665-3927762)
chr4 (24-121)||(21177996-21178092)
chr4 (44-117)||(55602379-55602451)
chr4 (18-121)||(14868889-14868990)
chr4 (18-121)||(14876944-14877045)
chr4 (262-323)||(8194012-8194072)
chr4 (17-97)||(46638723-46638803)
chr4 (43-121)||(49306774-49306851)
[»] chr3 (55 HSPs)
chr3 (14-121)||(12700174-12700279)
chr3 (17-121)||(54540788-54540892)
chr3 (17-119)||(8456479-8456580)
chr3 (17-117)||(7267647-7267746)
chr3 (17-121)||(29931225-29931329)
chr3 (17-121)||(29980379-29980483)
chr3 (14-121)||(12703495-12703601)
chr3 (14-121)||(7758401-7758508)
chr3 (17-121)||(29932697-29932800)
chr3 (17-121)||(29981851-29981954)
chr3 (17-117)||(47610578-47610678)
chr3 (26-121)||(54539754-54539849)
chr3 (14-120)||(47614185-47614291)
chr3 (16-121)||(22776809-22776914)
chr3 (14-121)||(19984848-19984955)
chr3 (25-121)||(534498-534594)
chr3 (17-117)||(7268825-7268924)
chr3 (17-121)||(28262192-28262295)
chr3 (17-121)||(28263109-28263213)
chr3 (17-121)||(47609696-47609800)
chr3 (17-121)||(52276303-52276407)
chr3 (17-121)||(52281545-52281649)
chr3 (17-120)||(51469972-51470075)
chr3 (17-120)||(52840602-52840705)
chr3 (38-121)||(55192014-55192096)
chr3 (17-121)||(18442629-18442734)
chr3 (17-121)||(19487703-19487808)
chr3 (26-117)||(40426785-40426877)
chr3 (37-121)||(53614818-53614902)
chr3 (18-121)||(5029682-5029784)
chr3 (14-121)||(11671336-11671442)
chr3 (26-121)||(24516459-24516554)
chr3 (19-120)||(18456063-18456165)
chr3 (14-121)||(19986065-19986174)
chr3 (63-121)||(47615592-47615650)
chr3 (24-120)||(535787-535883)
chr3 (17-121)||(51470453-51470556)
chr3 (14-117)||(23770402-23770505)
chr3 (17-120)||(51037536-51037638)
chr3 (16-121)||(46721217-46721322)
chr3 (45-121)||(5001199-5001275)
chr3 (25-121)||(8875905-8876001)
chr3 (24-120)||(46719941-46720037)
chr3 (42-121)||(51038813-51038892)
chr3 (26-117)||(34019152-34019241)
chr3 (14-117)||(54987002-54987103)
chr3 (14-93)||(31645000-31645079)
chr3 (26-120)||(49216247-49216341)
chr3 (35-120)||(53901404-53901487)
chr3 (44-96)||(6170296-6170348)
chr3 (44-96)||(6249633-6249685)
chr3 (17-121)||(52839036-52839140)
chr3 (38-121)||(23769856-23769939)
chr3 (28-117)||(52104484-52104569)
chr3 (28-117)||(51347271-51347360)
[»] chr8 (53 HSPs)
chr8 (17-121)||(12353359-12353461)
chr8 (14-121)||(10007758-10007865)
chr8 (24-119)||(18979125-18979220)
chr8 (25-115)||(1824084-1824174)
chr8 (25-115)||(1858529-1858619)
chr8 (14-120)||(10006344-10006450)
chr8 (17-117)||(29968335-29968434)
chr8 (17-121)||(12351920-12352024)
chr8 (14-121)||(5513981-5514087)
chr8 (17-121)||(38980042-38980146)
chr8 (17-121)||(39011139-39011243)
chr8 (14-121)||(22221359-22221466)
chr8 (14-121)||(22227701-22227808)
chr8 (17-120)||(38974795-38974898)
chr8 (17-120)||(39005893-39005996)
chr8 (17-111)||(18978029-18978122)
chr8 (14-120)||(22220388-22220494)
chr8 (14-121)||(30335638-30335745)
chr8 (14-121)||(43661818-43661925)
chr8 (24-121)||(1823551-1823648)
chr8 (24-121)||(1857996-1858093)
chr8 (16-121)||(32968455-32968560)
chr8 (28-117)||(40471156-40471244)
chr8 (18-121)||(8388463-8388564)
chr8 (17-117)||(11282011-11282111)
chr8 (14-121)||(32207320-32207425)
chr8 (14-118)||(43661267-43661371)
chr8 (23-117)||(8389693-8389787)
chr8 (16-120)||(32973933-32974037)
chr8 (17-96)||(24488678-24488756)
chr8 (35-117)||(11287779-11287861)
chr8 (17-111)||(18970920-18971013)
chr8 (40-121)||(45114537-45114618)
chr8 (14-82)||(18488257-18488325)
chr8 (26-121)||(24122882-24122976)
chr8 (14-96)||(24123893-24123975)
chr8 (598-707)||(33892692-33892802)
chr8 (14-50)||(11456679-11456715)
chr8 (593-665)||(14164355-14164427)
chr8 (727-827)||(14164474-14164574)
chr8 (17-120)||(11283207-11283310)
chr8 (25-120)||(30336507-30336602)
chr8 (14-121)||(30568886-30568992)
chr8 (38-121)||(42982676-42982759)
chr8 (62-120)||(24483143-24483201)
chr8 (71-120)||(36249552-36249601)
chr8 (14-118)||(29043400-29043504)
chr8 (24-121)||(5003103-5003198)
chr8 (54-120)||(23170034-23170098)
chr8 (264-323)||(23842731-23842790)
chr8 (43-121)||(5514294-5514371)
chr8 (64-121)||(11456637-11456694)
chr8 (25-62)||(24359865-24359902)
[»] chr6 (36 HSPs)
chr6 (14-121)||(7316289-7316396)
chr6 (17-121)||(8659264-8659368)
chr6 (17-121)||(8821872-8821976)
chr6 (14-120)||(7314880-7314985)
chr6 (14-117)||(1829598-1829701)
chr6 (17-120)||(8822791-8822894)
chr6 (43-121)||(16704521-16704599)
chr6 (17-121)||(10784591-10784696)
chr6 (17-121)||(3721611-3721715)
chr6 (17-121)||(14822359-14822463)
chr6 (17-121)||(27437827-27437931)
chr6 (17-121)||(8660202-8660305)
chr6 (17-117)||(34834577-34834677)
chr6 (18-121)||(27322067-27322169)
chr6 (35-120)||(16703570-16703652)
chr6 (27-121)||(14823583-14823678)
chr6 (44-121)||(6842308-6842385)
chr6 (264-321)||(22536014-22536071)
chr6 (28-96)||(26575063-26575131)
chr6 (45-121)||(3722533-3722609)
chr6 (14-121)||(6840193-6840298)
chr6 (17-121)||(26574618-26574721)
chr6 (709-825)||(28299189-28299305)
chr6 (709-825)||(28512768-28512884)
chr6 (267-317)||(10041174-10041224)
chr6 (45-121)||(27318314-27318389)
chr6 (24-120)||(30495702-30495797)
chr6 (17-121)||(3333024-3333128)
chr6 (39-115)||(29473082-29473158)
chr6 (17-96)||(10785911-10785990)
chr6 (472-527)||(28299032-28299087)
chr6 (472-527)||(28512986-28513041)
chr6 (72-118)||(26717137-26717183)
chr6 (17-95)||(34830927-34831005)
chr6 (278-323)||(2961551-2961596)
chr6 (24-117)||(5658759-5658852)
[»] scaffold0019 (2 HSPs)
scaffold0019 (14-119)||(61454-61559)
scaffold0019 (14-120)||(60090-60196)
[»] chr7 (33 HSPs)
chr7 (17-120)||(31659622-31659726)
chr7 (14-121)||(7500454-7500560)
chr7 (26-120)||(18371424-18371518)
chr7 (17-121)||(3227592-3227696)
chr7 (25-121)||(22630458-22630554)
chr7 (17-121)||(31949800-31949904)
chr7 (14-121)||(7501847-7501954)
chr7 (14-115)||(14999150-14999249)
chr7 (24-121)||(17782558-17782655)
chr7 (17-121)||(127336-127438)
chr7 (14-121)||(21505415-21505520)
chr7 (14-121)||(22629482-22629592)
chr7 (17-121)||(31949321-31949425)
chr7 (14-117)||(42886281-42886384)
chr7 (17-120)||(47525365-47525468)
chr7 (14-92)||(18372452-18372530)
chr7 (17-118)||(17781663-17781764)
chr7 (42-121)||(11658378-11658457)
chr7 (17-119)||(3227109-3227210)
chr7 (17-117)||(128599-128699)
chr7 (17-117)||(11662549-11662649)
chr7 (14-121)||(47369780-47369887)
chr7 (46-121)||(34174010-34174084)
chr7 (46-113)||(47524532-47524599)
chr7 (48-121)||(20163585-20163658)
chr7 (28-121)||(34352795-34352888)
chr7 (43-120)||(48934927-48935004)
chr7 (263-315)||(10024277-10024329)
chr7 (17-121)||(30439356-30439459)
chr7 (41-97)||(43899469-43899525)
chr7 (277-323)||(10024334-10024380)
chr7 (14-52)||(14998048-14998086)
chr7 (64-121)||(15681594-15681651)
[»] scaffold0320 (1 HSPs)
scaffold0320 (14-121)||(19487-19594)
[»] scaffold2034 (2 HSPs)
scaffold2034 (16-120)||(233-337)
scaffold2034 (16-97)||(975-1056)
[»] scaffold0302 (2 HSPs)
scaffold0302 (37-121)||(17469-17553)
scaffold0302 (17-120)||(18774-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (20-121)||(5439-5540)
scaffold0294 (20-121)||(4441-4542)
[»] scaffold0227 (1 HSPs)
scaffold0227 (17-120)||(117-220)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-121)||(49431-49535)
[»] scaffold0632 (1 HSPs)
scaffold0632 (17-121)||(3306-3409)
[»] scaffold0093 (2 HSPs)
scaffold0093 (17-119)||(2463-2564)
scaffold0093 (17-119)||(7086-7187)
[»] scaffold1303 (1 HSPs)
scaffold1303 (14-121)||(1438-1545)
[»] scaffold0112 (1 HSPs)
scaffold0112 (19-120)||(37148-37248)
[»] scaffold0186 (2 HSPs)
scaffold0186 (17-120)||(23081-23182)
scaffold0186 (17-121)||(23887-23992)
[»] scaffold0059 (2 HSPs)
scaffold0059 (17-119)||(4728-4829)
scaffold0059 (17-96)||(3699-3778)
[»] scaffold0586 (2 HSPs)
scaffold0586 (25-117)||(6346-6438)
scaffold0586 (24-121)||(9032-9127)
[»] scaffold0049 (1 HSPs)
scaffold0049 (17-121)||(7413-7517)
[»] scaffold0045 (1 HSPs)
scaffold0045 (44-120)||(49109-49185)
[»] scaffold0642 (1 HSPs)
scaffold0642 (262-323)||(8341-8401)
[»] scaffold0345 (1 HSPs)
scaffold0345 (262-323)||(18254-18314)
[»] scaffold0105 (1 HSPs)
scaffold0105 (262-323)||(20668-20728)


Alignment Details
Target: chr1 (Bit Score: 141; Significance: 2e-73; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 647 - 826
Target Start/End: Original strand, 15375024 - 15375206
Alignment:
Q  647 cttaagaaaaataggtaaataatcccatcaacaatgtatgtaataacatgaccatgactagtct---tatcagcacaagcttcgaagcctctaatagtcc 743  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||| ||||||||||||||| |||    
T  15375024 cttaagaaaaataggtaaataatcccatcaacaatgtatgttataacatgaccatgactagtctgcttatcagcacaagcatcgaagcctctaatattcc 15375123  T
Q  744 gatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggacttgatagagttcttttttct 826  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15375124 gatagaggaccttcattgagccagaggaataattgcacccttagactgggttttgtaatggacttgatagagttcttttttct 15375206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 353 - 527
Target Start/End: Original strand, 15374746 - 15374919
Alignment:
Q  353 tgacgttagtgactttnnnnnnntgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaaca 452  Q
    ||||||||||||||||       ||||| ||||||||||   || ||||||||||||||| || ||| |||| ||||||||||||||||||||||||| |    
T  15374746 tgacgttagtgactttaaaaaaatgaacattttatgtgcgccctgattcaattccttgcataacttggtttt-cataaaaattaattaggtccgccaaaa 15374844  T
Q  453 aggggagggttatatcaactaggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 527  Q
    ||||  |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15374845 agggcggggttatatcaattaggtttacaccccgaaggtacttttgtcttctaccacctgctctgaaattttatt 15374919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 24422903 - 24422799
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||||| |||| |||||||||||||    
T  24422903 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcacttt 24422804  T
Q  117 agcct 121  Q
    |||||    
T  24422803 agcct 24422799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 11437208 - 11437301
Alignment:
Q  28 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  11437208 taaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcct 11437301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 51684472 - 51684366
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||  |||||| ||||||||||||  |||| |||||||| |||||||||||||||    
T  51684472 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcac 51684373  T
Q  114 tttagcc 120  Q
    |||||||    
T  51684372 tttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 24426073 - 24426173
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  24426073 tgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttt 24426172  T
Q  117 a 117  Q
    |    
T  24426173 a 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 52275071 - 52274967
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||| |||||||  |||||||||||| ||||||||||||  |||| |||||||||||||    
T  52275071 tgcaatgaggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttt 52274972  T
Q  117 agcct 121  Q
    |||||    
T  52274971 agcct 52274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 39699765 - 39699867
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| |||||||  |||||||||||| | ||||||||| | ||||||||||||||||||    
T  39699765 tgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcacttt 39699863  T
Q  117 agcc 120  Q
    ||||    
T  39699864 agcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 11436148 - 11436041
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  ||| |||||| |||||||||||||||||||||||| || |||   | ||||||||||||| ||||||||||||| |||||||||||||||    
T  11436148 agatgcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcac 11436049  T
Q  114 tttagcct 121  Q
    ||||||||    
T  11436048 tttagcct 11436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 41364931 - 41364829
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| | ||| ||||||||||||||    
T  41364931 tgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttt 41364833  T
Q  117 agcc 120  Q
    ||||    
T  41364832 agcc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 51685760 - 51685867
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||||  ||| || ||||||| ||||  ||||||||||||  |||||||||||||||    
T  51685760 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcac 51685859  T
Q  114 tttagcct 121  Q
    ||||||||    
T  51685860 tttagcct 51685867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 45148686 - 45148581
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| ||||||| |||||||||||||||| || ||||||| ||||||||||||| |||||||||||||  ||| ||||||||||    
T  45148686 agatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcac 45148588  T
Q  114 tttagcc 120  Q
    |||||||    
T  45148587 tttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 23980463 - 23980568
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| ||||||||||| |||| | |||||||| ||||||||||| ||||||  ||||||||||||| |||| |||||||  |||||||||||||||||    
T  23980463 atgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactt 23980562  T
Q  116 tagcct 121  Q
    ||||||    
T  23980563 tagcct 23980568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 35067000 - 35067104
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||   |||||| ||||||| ||||  |||||||| |||| ||||||||||||||||||    
T  35067000 tgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttt 35067099  T
Q  117 agcct 121  Q
    |||||    
T  35067100 agcct 35067104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 52827450 - 52827346
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  52827450 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 52827351  T
Q  117 agcct 121  Q
    |||||    
T  52827350 agcct 52827346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 37526873 - 37526975
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| |||||| |||||||||| |||| | |||||||||  ||||||||||||| ||||||||||||| ||||||||||| |||    
T  37526873 agatgcaaaggggctaaatcttagggg-ccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacac 37526971  T
Q  114 ttta 117  Q
    ||||    
T  37526972 ttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 45149965 - 45150068
Alignment:
Q  14 agatgcaatggggctaaatcatagggggc-caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgca 112  Q
    |||||||| ||||||||||| |||||||  ||||||||| ||||||||| ||| ||| ||||||||||||| ||||||||||| | ||||||||||||||    
T  45149965 agatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgca 45150063  T
Q  113 cttta 117  Q
    |||||    
T  45150064 cttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 52828068 - 52828168
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||  ||||||||||||| |||||||| |||  ||||||||||||||||||    
T  52828068 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttt 52828167  T
Q  117 a 117  Q
    |    
T  52828168 a 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 15373868 - 15373931
Alignment:
Q  260 ttatgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15373868 ttatgaaaaggaacggttatgtggtaattgaaagaaaaaataataatcaaaaggaactgttata 15373931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 36613910 - 36614005
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||| |||| |||| |||||||  || |||||| ||||||||||||    
T  36613910 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 39153111 - 39153214
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| ||| ||| |||||||||||||||||||  || ||| ||||||||||||| |||||||| |||| |||| ||||||||||    
T  39153111 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcac 39153210  T
Q  114 ttta 117  Q
    ||||    
T  39153211 ttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 39222468 - 39222575
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgca 112  Q
    ||||||||  |||| ||||| ||| |||| || |||||||||||| || ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||    
T  39222468 agatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgca 39222567  T
Q  113 ctttagcc 120  Q
    ||||||||    
T  39222568 ctttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 12389980 - 12390083
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| ||||||||||||||| || ||||||||  ||||||| |||||| ||||  ||||||||||||| | ||||||| ||||||||    
T  12389980 tgcaaaggggctaaatc-tagggggccaaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcacttt 12390078  T
Q  117 agcct 121  Q
    |||||    
T  12390079 agcct 12390083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 33088615 - 33088719
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| ||||| | ||||||||||||||||||| |||  ||  |||||||||||| ||||||| ||||  | ||||||||||||||||    
T  33088615 tgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcacttt 33088714  T
Q  117 agcct 121  Q
    |||||    
T  33088715 agcct 33088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 36612958 - 36612852
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||| ||||||| |||||||  |||||||||||||||||| ||| |   ||||||||||||  ||||||||||||| ||||||||| |||||    
T  36612958 agatgcaaagggactaaatcttagggggttaaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcac 36612860  T
Q  114 tttagcct 121  Q
    ||||||||    
T  36612859 tttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 43378708 - 43378810
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| || |||||||| |||| || |||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||| | | |||||||||||    
T  43378708 agatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaa-gagagaaaagtgcac 43378806  T
Q  114 ttta 117  Q
    ||||    
T  43378807 ttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 45157204 - 45157310
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| ||  ||| |||||||||||||||||||  |||||| ||||||||||||| |||||||| || | ||||| |||||||||    
T  45157204 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcac 45157302  T
Q  114 tttagcct 121  Q
    ||||||||    
T  45157303 tttagcct 45157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 50680437 - 50680335
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| |||||| | |||||| |||||||| || ||||||| ||||||||||||| ||||| ||||||| ||||||||| |||||    
T  50680437 agatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaa-gggggaaaaatgcac 50680339  T
Q  114 ttta 117  Q
    ||||    
T  50680338 ttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 14999361 - 14999284
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||| |||||||  |||||||||||| ||||||||||| | ||||||||||| |||||||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcct 14999284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 39698643 - 39698562
Alignment:
Q  40 ggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| |||||| |||| ||||||| ||||||||| ||| |||| |||||||| ||||| |||||||||||||||||    
T  39698643 ggccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcct 39698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 44404537 - 44404441
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||  ||||||||||||||| ||||||||||| ||||||| | |||||||| || ||||||||||||   ||| ||||||||| ||||||||    
T  44404537 ggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcct 44404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 52276161 - 52276261
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||| | ||| || ||||||||||| ||||||| |||||||| |||  ||||||||||||   |||| ||||||||||||    
T  52276161 tgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcacttt 52276260  T
Q  117 a 117  Q
    |    
T  52276261 a 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 7675454 - 7675560
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||| ||||||| || ||||| || ||||| |  |||||||||||| ||||||||||||| || || ||||| |||    
T  7675454 agatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagtacac 7675552  T
Q  114 tttagcct 121  Q
    ||||||||    
T  7675553 tttagcct 7675560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 35594321 - 35594216
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||  |||||| | ||||||||||||||  || ||||||| | ||||||||||| ||||||||||||  || ||||||||||||    
T  35594321 agatgcaaaggggctaaattttaggggtc-aaaattgtagttttaatacttaggggtc-aaaattgcaagtttttgaaagttaggggtggaaaagtgcac 35594224  T
Q  114 tttagcct 121  Q
    ||||||||    
T  35594223 tttagcct 35594216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 43058891 - 43058789
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||| || ||||||||||| ||| |||| |||||||||||||||||| |||||||  |||||||||||| |||| |||||| | |||| ||||||| ||    
T  43058891 agatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtac 43058793  T
Q  114 ttta 117  Q
    ||||    
T  43058792 ttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 11190462 - 11190384
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||| ||||||||||| ||||| |||||||||||||  |||| ||| |||| ||| |||||||||||||||||||    
T  11190462 caaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcct 11190384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 465
Target Start/End: Complemental strand, 2129431 - 2129343
Alignment:
Q  376 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaacaaggggagggttat 465  Q
    ||||||||| |||||||| |||||| |||| ||||||||  || |||||||||||||||||||| |||||||||| |||||  |||||||    
T  2129431 tgaacttttcatgtgctacctaatttaatttcttgcagacctt-ttttttcataaaaattaattgggtccgccaaaaagggttgggttat 2129343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7983152 - 7983053
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||||| |||||| ||||||| ||||||||| |||||  ||  |||||| ||||||||||||| | ||||||||| | ||| ||||||||||||||    
T  7983152 tgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcacttt 7983054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 41366129 - 41366232
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||| ||| |||| |||||  || ||| ||| | ||||||||| | ||||||||||||   |||||||||||||||||    
T  41366129 tgcaatggggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcacttt 41366227  T
Q  117 agcct 121  Q
    |||||    
T  41366228 agcct 41366232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 39152037 - 39151934
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| ||  | | |||||||||||||||||||  |||||| |||||||| |||| |||||||| |||| |||| |||| |||||    
T  39152037 agatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcac 39151938  T
Q  114 ttta 117  Q
    ||||    
T  39151937 ttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 43060013 - 43060108
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||| || |||| ||||||||||||||||||| ||| |||  ||||||| |||  ||||||||||||  ||||| ||||| |||||||||||    
T  43060013 gctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcct 43060108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 7674603 - 7674527
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||| ||| ||| ||||||||||||| |||| |||||| | |||||||||| ||||||||||||    
T  7674603 caaaattgtagtttttgtactta-gggcccaaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcct 7674527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 50681627 - 50681705
Alignment:
Q  42 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||| |||||||||||| || |||| |  ||||||||||||| |||||||| ||||  |||||||||||||||||||||    
T  50681627 ccaatattgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 35595187 - 35595295
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgt-agtttttgtatttaggggaccaaaattgc-aaggttttgaaagttaatgggggaaaagtgc 111  Q
    |||||||| ||||||||||| |||||| |||||||||| ||||||| ||  ||||||  ||||||||| ||| |||| |||||||  ||||||||||| |    
T  35595187 agatgcaaaggggctaaatcttagggg-ccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtac 35595285  T
Q  112 actttagcct 121  Q
    ||||||||||    
T  35595286 actttagcct 35595295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 14999983 - 15000057
Alignment:
Q  47 attgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||| ||||||| |||||||| |||||||||||| |||| |||||||  | || ||||||| ||||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcct 15000057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 16290170 - 16290092
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||| ||  || ||||||||||||||||  ||||||| |||| |||||| |||| |||||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcct 16290092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 25652820 - 25652742
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 92  Q
    ||||||||  |||||||||| ||| |||||||| || || |||||||| ||| |||| |||||||||||| ||||||||    
T  25652820 agatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagtttttgaaa 25652742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 40384831 - 40384727
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatg-ggggaaaagtgca 112  Q
    |||||||| | ||||||||  ||||||  |||||||||||||||||||  |||| ||| ||||||||||  |||||||| |||| | ||  |||||||||    
T  40384831 agatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaaattaaagaggaaaaaagtgca 40384732  T
Q  113 cttta 117  Q
    |||||    
T  40384731 cttta 40384727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 44411991 - 44412030
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaag 83  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  44411991 aaaattgtagtttttgtacttaggggactaaaattgcaag 44412030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 2129504 - 2129470
Alignment:
Q  286 attgaaagaaaaaataataatcaaaaggaactgct 320  Q
    ||||||||||||||||||||| |||||||||||||    
T  2129504 attgaaagaaaaaataataatgaaaaggaactgct 2129470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 2129571 - 2129521
Alignment:
Q  261 tatgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaa 311  Q
    ||||||||| ||| | |||||| ||||||||||||||||||||||| ||||    
T  2129571 tatgaaaagaaactgatatgtgataattgaaagaaaaaataataataaaaa 2129521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 593 - 626
Target Start/End: Original strand, 15374986 - 15375019
Alignment:
Q  593 gaacgaagggaatctaaaattcggaaggctatgt 626  Q
    |||||||||||||||||||||| |||||||||||    
T  15374986 gaacgaagggaatctaaaattcagaaggctatgt 15375019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 46524642 - 46524578
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaa 82  Q
    ||||| ||||||||||| |||||||||||| || || ||||| || | ||||||||||||||||||    
T  46524642 tgcaaaggggctaaatcttagggggccaaatttttatttttttta-tcaggggaccaaaattgcaa 46524578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 2e-39; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 19753017 - 19752911
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  19753017 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcac 19752919  T
Q  114 tttagcct 121  Q
    ||||||||    
T  19752918 tttagcct 19752911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 19754125 - 19754233
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggg-gaaaagtgca 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||| ||||    
T  19754125 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgca 19754224  T
Q  113 ctttagcct 121  Q
    |||||||||    
T  19754225 ctttagcct 19754233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 25523175 - 25523068
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||||||||    
T  25523175 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 25523076  T
Q  114 tttagcct 121  Q
    ||||||||    
T  25523075 tttagcct 25523068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 18486897 - 18487004
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||||||||||||| |||| | || ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||    
T  18486897 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcac 18486996  T
Q  114 tttagcct 121  Q
    ||||||||    
T  18486997 tttagcct 18487004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 40255670 - 40255774
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||||||||||  |||||||||||| |||| ||| ||||  |||||||||||||||||    
T  40255670 tgcaatggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcacttt 40255769  T
Q  117 agcct 121  Q
    |||||    
T  40255770 agcct 40255774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 5778834 - 5778938
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||    
T  5778834 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 5778933  T
Q  117 agcct 121  Q
    |||||    
T  5778934 agcct 5778938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 28538779 - 28538675
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||| ||| |||  |||||||||||| ||||||||||||  || |||||||||||||||    
T  28538779 tgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcacttt 28538680  T
Q  117 agcct 121  Q
    |||||    
T  28538679 agcct 28538675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 22940641 - 22940723
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||| |||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22940641 ggggtcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 16650850 - 16650957
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||| | |||||||| ||||||||||||||| || |||||||  |||||||||||| |||| |||||||| || ||||||||||||    
T  16650850 agatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcac 16650949  T
Q  114 tttagcct 121  Q
    ||||||||    
T  16650950 tttagcct 16650957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 25055518 - 25055411
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||||| |||||||||||||||||||||||| ||  ||||||| ||||||||||||   || |||||||  |||||||||||||||    
T  25055518 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcac 25055419  T
Q  114 tttagcct 121  Q
    ||||||||    
T  25055418 tttagcct 25055411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 5778002 - 5777900
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||| ||||||||||||    
T  5778002 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcacttt 5777905  T
Q  117 agcct 121  Q
    |||||    
T  5777904 agcct 5777900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 20216768 - 20216861
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||| || | |||||||||||||||||||||||||| |||||  | ||||||||||| |||||||| |||| |||||||||||||||||||    
T  20216768 gggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 33160291 - 33160388
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| || |||| |||||||||||||| | || ||||||| | ||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  33160291 gggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcct 33160388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 36486486 - 36486590
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| ||||||||||||     
T  36486486 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttc 36486585  T
Q  117 agcct 121  Q
    |||||    
T  36486586 agcct 36486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 24333019 - 24332916
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| ||| ||| |||||||||||||||||||  || ||| ||||||||||||| |||||||| |||| |||| ||||||||||    
T  24333019 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcac 24332920  T
Q  114 ttta 117  Q
    ||||    
T  24332919 ttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 25056382 - 25056482
Alignment:
Q  20 aatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 119  Q
    |||| ||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||   | ||||||||||||||||||    
T  25056382 aatgaggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagc 25056481  T
Q  120 c 120  Q
    |    
T  25056482 c 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 42195238 - 42195137
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||  |||||| ||||||| ||||  |||| |||||||| |||||||||||||||    
T  42195238 agatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaa-ctttttaaagttaa-gggggaaaagtgcac 42195141  T
Q  114 ttta 117  Q
    ||||    
T  42195140 ttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 2686396 - 2686478
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    |||||||||| |||||||||||||||| |||||||| ||||||||||| ||| | || |||||||||||| |||| |||||||    
T  2686396 agatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagtta 2686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 20214277 - 20214196
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||||||||||||||||||  ||| |  | ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20214277 ggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 28539818 - 28539917
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||||| |||| ||  |||||||||||| |||| |||||| | ||||||||| ||||||||    
T  28539818 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttt 28539916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 1796131 - 1796054
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||||||||||||| ||||| | ||||| ||||||| ||||||||||||  || |||||| ||||||||||||    
T  1796131 caaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 7311685 - 7311589
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||| |||||||| |||||||||||||||||| || || | |||| |||||||| ||||||||||||  |||||    ||||||||||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggggggggtgcactttagcct 7311589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 18154595 - 18154493
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||| |||||||  ||| |||| |||||||||||||||||| ||||||| | ||||||| ||| ||||||||||||| |||  |||||| ||||||    
T  18154595 tgcaatggagctaaattttagagggc-aaaattgtagtttttgtacttaggggtc-aaaattgtaagtttttgaaagttaaggggaaaaaagttcacttt 18154498  T
Q  117 agcct 121  Q
    |||||    
T  18154497 agcct 18154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 18485251 - 18485137
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaa-------ttgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaa 106  Q
    |||||||| ||||||||||| |||||||||||||       |||| |||||  || ||||||| ||||||||||||| |||| |||||||  |||| |||    
T  18485251 agatgcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaa 18485152  T
Q  107 agtgcactttagcct 121  Q
    |||||||||||||||    
T  18485151 agtgcactttagcct 18485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 25524143 - 25524230
Alignment:
Q  35 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactttagcct 121  Q
    |||| |||||||||||||||||||||| ||||||| |||||||| |||  |||| ||| |||   |||||||||||||||||||||||    
T  25524143 taggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcct 25524230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 33158180 - 33158097
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||| ||||||||||||||||||| ||||||   |||||||||||| ||||||||||||  |||  |||| |||||||||||||    
T  33158180 ggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 5730517 - 5730440
Alignment:
Q  45 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa-tgggggaaaagtgcactttagcct 121  Q
    ||||||| ||||| ||| |||||   ||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcct 5730440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 25524093 - 25524158
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattg 79  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| | |||||||||    
T  25524093 agatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 36485403 - 36485302
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||| |||||| ||||||||||||||| ||||||||||| ||| | |  |||||||| ||| |||| |||||||  || |||||| ||||||||    
T  36485403 tgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcacttt 36485304  T
Q  117 ag 118  Q
    ||    
T  36485303 ag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 5962579 - 5962671
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||  |||| ||| |||||| ||||||||||| |||||||||||||||| |||  |||||||||| |  | || |||||||||||||||||    
T  5962579 gctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttgaaagtca--gtggaaaaagtgcactttagcc 5962671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 2685820 - 2685749
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||||||||||||||| ||||||||||||||||  ||| |||||||| |||  ||||||| |||||| ||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaatta--gggggaatagtgcatttta 2685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 1797295 - 1797375
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 97  Q
    ||||| ||||||||||| || ||| ||||||||||||||||||| | || ||  ||||||||||||| |||| ||| ||||    
T  1797295 tgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaa 1797375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 16650098 - 16650042
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggga 70  Q
    |||||||| |||| |||||| ||| ||| ||||||||||||||||||| ||||||||    
T  16650098 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttagggga 16650042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 21835143 - 21835040
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||  ||||||  ||||||  |||  |||| ||| |||  ||||| ||||||||||||    
T  21835143 tgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagaggggg-aaagtgcacttt 21835045  T
Q  117 agcct 121  Q
    |||||    
T  21835044 agcct 21835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42196195 - 42196302
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||||| |||||| | |||| |||||||||||||  ||| || ||||| |  |||  |||| |||||||  ||||| |||||||||    
T  42196195 agatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcac 42196294  T
Q  114 tttagcct 121  Q
    ||||||||    
T  42196295 tttagcct 42196302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  46 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    ||||||||||||||||  |||||  ||||||||||||| ||||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 7899882 - 7899984
Alignment:
Q  19 caatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 118  Q
    ||||||||||||||| |||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7899882 caatggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 7899981  T
Q  119 cct 121  Q
    |||    
T  7899982 cct 7899984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 22848294 - 22848190
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||    
T  22848294 tgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttt 22848195  T
Q  117 agcct 121  Q
    |||||    
T  22848194 agcct 22848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 38840491 - 38840595
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||    
T  38840491 tgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 38840590  T
Q  117 agcct 121  Q
    |||||    
T  38840591 agcct 38840595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 38839345 - 38839241
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||| |||| |||| |||| ||||||||    
T  38839345 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcacttt 38839246  T
Q  117 agcct 121  Q
    |||||    
T  38839245 agcct 38839241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 23869530 - 23869636
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||| || |||||||||||||||||||||||||| |||||||||||| ||||| |||||||| || ||||||||||||    
T  23869530 agatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaa-gtttttaaagttaagggtggaaaagtgcac 23869628  T
Q  114 tttagcct 121  Q
    ||||||||    
T  23869629 tttagcct 23869636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 36449861 - 36449777
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36449861 ggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 36449777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 18299479 - 18299373
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| || ||||| | ||||||||| ||| ||||||||||||  || ||||||||||||    
T  18299479 agatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcac 18299380  T
Q  114 tttagcc 120  Q
    |||||||    
T  18299379 tttagcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7898794 - 7898694
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||||||||||||||||| | || ||||| | | ||||||||||| ||||||||||||| ||| ||||||||||||||    
T  7898794 tgcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttt 7898695  T
Q  117 a 117  Q
    |    
T  7898694 a 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 11258809 - 11258913
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  | ||| ||| ||||||||    
T  11258809 tgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcacttt 11258908  T
Q  117 agcct 121  Q
    |||||    
T  11258909 agcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 18904473 - 18904366
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||| || |||||||| || |||||  |||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||||| |||||||||||||||    
T  18904473 agatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcac 18904374  T
Q  114 tttagcct 121  Q
    ||||||||    
T  18904373 tttagcct 18904366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 22587949 - 22588055
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||   |||||||| |||||    
T  22587949 agatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatagggg-ccaaaattgcaagtttttgaaagttatgaggggaaaaatgcac 22588047  T
Q  114 tttagcct 121  Q
    ||||||||    
T  22588048 tttagcct 22588055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 36450939 - 36451018
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  36450939 gggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 41878197 - 41878092
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgca---aggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| ||||||| |||||||||||   || ||||||||||||| ||||| |||||||||    
T  41878197 tgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaa-ggggggaaagtgcac 41878099  T
Q  114 tttagcc 120  Q
    |||||||    
T  41878098 tttagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 41879210 - 41879314
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||| |||||||  |||||||  ||||||||||||| |||| ||||||| ||||||||||||| |||||||| |||| |||| ||||||| |||||    
T  41879210 tgcaatggtgctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtacttt 41879309  T
Q  117 agcct 121  Q
    |||||    
T  41879310 agcct 41879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 1034475 - 1034570
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||| ||||||| | ||||||| ||||| |||  |||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 18906006 - 18906089
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  18906006 ggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcct 18906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 13030383 - 13030293
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 119  Q
    |||||||| |||||||| ||||||||| |||||||| ||||||| |||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  13030383 gctaaatcttagggggcaaaaattgtaatttttgtacttagggg-ccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 18300720 - 18300822
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||||||||| ||||||| | |||||||||||||||||| |||||||  |||||||||||| || |||||||||  ||||||||||||||     
T  18300720 agatgcaaaggggctaaattataggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaa 18300816  T
Q  114 tttagc 119  Q
    ||||||    
T  18300817 tttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 18869001 - 18868923
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||  || |||||||| |||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcct 18868923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 11257724 - 11257621
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||| ||||||||||||||||||| || ||||||    ||||||||||| ||||||||||||  || | |||||||||||||    
T  11257724 tgcaatggggctaaatcttaggaggccaaaattgtagtttttatacttagggttt-aaaattgcaagtttttgaaagttagaggagtaaaagtgcacttt 11257626  T
Q  117 agcct 121  Q
    |||||    
T  11257625 agcct 11257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 18797353 - 18797245
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggg-ggaaaagtgca 112  Q
    |||||||| ||||||||||  ||||||| |||||||||||||||  || ||| |||  |||||||||||| ||||||||||||  ||| |||||||||||    
T  18797353 agatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgca 18797254  T
Q  113 ctttagcct 121  Q
    |||||||||    
T  18797253 ctttagcct 18797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 11938796 - 11938890
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||| || ||||||| ||||||| || |||||||| ||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  11938796 gctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 11938890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 13568049 - 13567975
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||   |||||||||| |||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 598 - 707
Target Start/End: Original strand, 17906192 - 17906302
Alignment:
Q  598 aagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaataatcccatca-acaatgtatgtaataacatg 696  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||  || |||| |||| || |||||||||||| || ||||  | ||||||||||||    
T  17906192 aagggaatctaaaattcggaagaccatgtttgtccctgtaaaaatcatgcctaagtaaaacagataaataatcccaccagacaacatttgtaataacatg 17906291  T
Q  697 accatgactag 707  Q
    |||||||||||    
T  17906292 accatgactag 17906302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 22587606 - 22587525
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||||||||    
T  22587606 agatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 28618027 - 28617946
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||||||| || |||| ||||||||||||| ||||||||||||    
T  28618027 agatgcaaaggggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 24475318 - 24475248
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    ||||||| ||||||||||||||||||||||||| || ||||||| | |||||| |||| ||||||||||||    
T  24475318 gctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 802588 - 802692
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| ||||  ||||| ||| ||| |||||||||||||||||||   ||||| ||||||||||||| |||||||| || | ||||||||||| |||||    
T  802588 atgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactt 802686  T
Q  116 tagcct 121  Q
    ||||||    
T  802687 tagcct 802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 10928137 - 10928068
Alignment:
Q  376 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgc 447  Q
    ||||||||| |||||||| || |||||||| |||||||| |||  |||||||||||||||||||||||||||    
T  10928137 tgaacttttcatgtgctacctgattcaatttcttgcagacttt--tttttcataaaaattaattaggtccgc 10928068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 13570575 - 13570659
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||| |||||||| ||||||||||| ||| ||||| ||||||||||| ||||||||||||  ||  ||||| |||||||||||||    
T  13570575 ggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcct 13570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 24476863 - 24476943
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||| |||| ||||||   |||| ||||||||||| |||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcactctagcc 24476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 32739706 - 32739647
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    |||||||||||||||||||||||||  || ||| ||||||||||||| ||||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 1033312 - 1033212
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||| |||   ||||| || |||| ||||||||||| ||||||||||||| |||| |||||| | ||||||||||| ||||||    
T  1033312 tgcaatggggctaaatcttagaggggttaaattataattttggtatttagggg-ccaaaattgcaagtttttaaaagtt-aggggggaaaagtacacttt 1033215  T
Q  117 agc 119  Q
    |||    
T  1033214 agc 1033212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 16446231 - 16446153
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||||||| | |   ||||||||||| ||||||||||||| ||  ||||| |||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcct 16446153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 26545516 - 26545621
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||| ||| ||||||| || |||||||||||| |||  |||||||||||  |||||||||| |    || ||||||||||    
T  26545516 agatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcac 26545615  T
Q  114 tttagc 119  Q
    ||||||    
T  26545616 tttagc 26545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 1093144 - 1093247
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| ||| |||  ||||||||| ||||||||| ||||| | || ||||||||  |||| |||||||| ||||||||| | ||||||    
T  1093144 tgcaaaggggctaaatcttagcgggttaaaattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa-tacacttt 1093242  T
Q  117 agcct 121  Q
    |||||    
T  1093243 agcct 1093247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 456
Target Start/End: Original strand, 40140342 - 40140422
Alignment:
Q  376 tgaactttttatgtgctatctaattcaattccttgcagaatttgttttttcataaaaattaattaggtccgccaacaaggg 456  Q
    ||||||||| ||||| || || ||||||||||||||  | ||| ||||||||||||||||||||||| || |||| |||||    
T  40140342 tgaacttttcatgtgttacctgattcaattccttgcgaacttttttttttcataaaaattaattaggcccaccaaaaaggg 40140422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 21837299 - 21837355
Alignment:
Q  63 ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||| ||||||||||||| ||||||||||||  |||| ||||||||||||||||||    
T  21837299 ttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcct 21837355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 810778 - 810854
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 92  Q
    |||||| ||||  ||||| ||| ||| |||||||||||||||||||   ||||| ||||||||||||| ||||||||    
T  810778 atgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaa 810854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 10928234 - 10928182
Alignment:
Q  270 gaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctat 322  Q
    |||||| |||||| ||| |||||||||| |||||||| |||||||||||||||    
T  10928234 gaacagttatgtgataactgaaagaaaatataataatgaaaaggaactgctat 10928182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 8535654 - 8535752
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||||||| || ||||||| |||||||||||||| | || |||  ||| ||||||| |||| |||| |||||||  || ||||||||| |||||    
T  8535654 tgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtgtacttt 8535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 7e-33; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 52491605 - 52491709
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| || |||||||| ||||||    
T  52491605 tgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacacttt 52491704  T
Q  117 agcct 121  Q
    |||||    
T  52491705 agcct 52491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 1290193 - 1290300
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| |||||||| |||||||||||||||||| |||| || ||||||||||||| ||||||||||||| |||||||||||||||    
T  1290193 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcac 1290292  T
Q  114 tttagcct 121  Q
    ||||||||    
T  1290293 tttagcct 1290300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 10471386 - 10471489
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  10471386 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 10471485  T
Q  117 agcc 120  Q
    ||||    
T  10471486 agcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 8758835 - 8758935
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||| |||||||| || ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||    
T  8758835 tgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttt 8758934  T
Q  117 a 117  Q
    |    
T  8758935 a 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 25685820 - 25685924
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  25685820 tgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 25685919  T
Q  117 agcct 121  Q
    |||||    
T  25685920 agcct 25685924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 49308032 - 49308128
Alignment:
Q  23 ggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  49308032 ggggcaaaatcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 49308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 19750573 - 19750673
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||    
T  19750573 tgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttt 19750671  T
Q  117 ag 118  Q
    ||    
T  19750672 ag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 19789233 - 19789133
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||    
T  19789233 tgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttt 19789135  T
Q  117 ag 118  Q
    ||    
T  19789134 ag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 1963299 - 1963195
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||||||| || |||||||| ||||||||||||||||||  |||| | ||||||||||||  ||||||||||||| ||||||||||||||||||    
T  1963299 tgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 1963200  T
Q  117 agcct 121  Q
    |||||    
T  1963199 agcct 1963195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 12129729 - 12129626
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||||| || |||| ||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  12129729 agatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcac 12129630  T
Q  114 ttta 117  Q
    ||||    
T  12129629 ttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 17388215 - 17388312
Alignment:
Q  23 ggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||| || | |||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  17388215 ggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 17388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 8155843 - 8155741
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggga-ccaaaattgcaaggttttgaaagttaatgggggaaaagtgca 112  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||| | |||||||| | ||||||||||| ||||||||||||  ||||||||||||||    
T  8155843 agatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgca 8155746  T
Q  113 cttta 117  Q
    |||||    
T  8155745 cttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 8757777 - 8757674
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| || ||| ||||||||||||||| |||| ||||||| | ||||||| ||| ||||||||||||| |||| |||||||||||||    
T  8757777 tgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaa-ggggaaaaagtgcacttt 8757679  T
Q  117 agcct 121  Q
    |||||    
T  8757678 agcct 8757674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 10470649 - 10470545
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | |||||||  |||| ||| |||| ||  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  10470649 tgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 10470550  T
Q  117 agcct 121  Q
    |||||    
T  10470549 agcct 10470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 17383075 - 17382992
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||    
T  17383075 gggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcct 17382992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 31599892 - 31599788
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| ||||||||||||     
T  31599892 tgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttc 31599793  T
Q  117 agcct 121  Q
    |||||    
T  31599792 agcct 31599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 35935531 - 35935631
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||| ||||||| | ||||||||||  |||| |||||||| ||||| ||||||||||||    
T  35935531 tgcaatgaggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttt 35935630  T
Q  117 a 117  Q
    |    
T  35935631 a 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 48780351 - 48780247
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| |||| |||||||  ||||||||||||||||||    
T  48780351 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcacttt 48780252  T
Q  117 agcct 121  Q
    |||||    
T  48780251 agcct 48780247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 1835097 - 1835204
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  |  ||||||||||||    
T  1835097 agatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcac 1835196  T
Q  114 tttagcct 121  Q
    ||||||||    
T  1835197 tttagcct 1835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 25685037 - 25684934
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  25685037 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 25684938  T
Q  117 agcc 120  Q
    ||||    
T  25684937 agcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 3928855 - 3928960
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||  ||  |||||| ||||||| |||| |||||||||||||  |||||||||||||||||    
T  3928855 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactt 3928954  T
Q  116 tagcct 121  Q
    ||||||    
T  3928955 tagcct 3928960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 35934445 - 35934347
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| || |||||||||||| || ||| | || |||||||||||||||| |||| ||||||||||||  ||||||||||||||||||    
T  35934445 tgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttt 35934348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 5526124 - 5526227
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| |||||  || ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||    
T  5526124 tgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttt 5526222  T
Q  117 agcct 121  Q
    |||||    
T  5526223 agcct 5526227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 31600990 - 31601086
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||||| || |||| ||||||||||||||||||| |||||||  |||||||||||| |||| |||||||  |||| |||||||||||||||||    
T  31600990 gggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 48781044 - 48781147
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||  ||||||| | ||||||| ||||| ||| |||||| |||||||||||||  ||||||||||||  ||||||||||||||||||    
T  48781044 tgcaatggggctaaattttaggggggctaaattgtggttttagtacttaggg-accaaaattgcaaatttttgaaagttagagggggaaaagtgcacttt 48781142  T
Q  117 agcct 121  Q
    |||||    
T  48781143 agcct 48781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 26421627 - 26421723
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| || |||| ||||||||||||||||||| ||||| |  |||||||||||| ||||||||||| |  ||||||||||||||||||||||    
T  26421627 gggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcct 26421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 5525462 - 5525359
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||| | ||||||||| || |||||    
T  5525462 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtacttt 5525364  T
Q  117 agcct 121  Q
    |||||    
T  5525363 agcct 5525359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 1834226 - 1834119
Alignment:
Q  14 agatgcaatggggctaaatcataggggg-ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgca 112  Q
    ||||||||  |||||||||| ||||||| ||||||||||||||||| ||  ||||||  |||||||| ||| |||| |||||||  ||||||||||||||    
T  1834226 agatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgca 1834127  T
Q  113 ctttagcc 120  Q
    ||||||||    
T  1834126 ctttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 10447113 - 10447006
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa-tgggggaaaagtgca 112  Q
    |||||||| ||||||||||| |||||||  |||||||| |||||||||  |||||| | ||||||||||  |||||||| ||||  ||||||||||||||    
T  10447113 agatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgca 10447014  T
Q  113 ctttagcc 120  Q
    ||||||||    
T  10447013 ctttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 13386119 - 13386013
Alignment:
Q  17 tgcaatggggctaaatcatagggggcca-aaattgtagtttttgtatttaggggaccaaaattgcaaggtttt-gaaagttaatgggggaaaagtgcact 114  Q
    ||||||| ||||||||| |||||||  | ||||||| ||||| ||| ||||||| ||||||||||||| |||| ||||||||  ||||||||||||||||    
T  13386119 tgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcact 13386020  T
Q  115 ttagcct 121  Q
    |||||||    
T  13386019 ttagcct 13386013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 13386530 - 13386635
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgcactt 115  Q
    ||||||||||||| ||| ||||||| | ||||||| ||||| ||| ||| |||  |||||||||||| ||||||||||||  ||||| ||||||||||||    
T  13386530 tgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactt 13386629  T
Q  116 tagcct 121  Q
    ||||||    
T  13386630 tagcct 13386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 13509346 - 13509460
Alignment:
Q  6 aggagcacagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaa 105  Q
    ||||||| || ||||| ||||||||||| ||||||  |||||||||||||||  || || |||| ||||||||||||  |||| |||||| | |||||||    
T  13509346 aggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaa 13509444  T
Q  106 aagtgcactttagcct 121  Q
    |||| |||||||||||    
T  13509445 aagtacactttagcct 13509460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 33310095 - 33310187
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||  | |||||| |||| |||| |||||||   ||  |||||||||||||||||    
T  33310095 ggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta---ggaaaaaagtgcactttagcc 33310187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 21539066 - 21539162
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtg 110  Q
    |||||||| || |||||||| ||||||| ||||||||||||||||  | ||||| | ||||||||||||| |||| ||| |||| || |||||||||    
T  21539066 agatgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 55603549 - 55603628
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||||||||| ||||||||||||   ||||||  ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaa-ggggaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 1289203 - 1289100
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| || | ||| ||||||||||||||| || |||| ||| ||||||| |||   |||||||||||| ||||||||||| |||    
T  1289203 agatgcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcac 1289104  T
Q  114 ttta 117  Q
    ||||    
T  1289103 ttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 10448255 - 10448362
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||| ||| ||| |||||||||||||||||||||||  |||||| | ||||| ||||  |||||||| |||  || ||  ||||||||    
T  10448255 agatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcac 10448354  T
Q  114 tttagcct 121  Q
    ||||||||    
T  10448355 tttagcct 10448362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 1964464 - 1964542
Alignment:
Q  42 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||||||||||||||   |||||| ||||||||| ||  |||| |||||||| || |||||||||||||||||||    
T  1964464 ccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 3927762 - 3927665
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||| ||||| || ||||||||||||||||  ||  | |||| ||||||| ||||  |||| |||||||  |||||||||||||||||||||||    
T  3927762 gggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcct 3927665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 21178092 - 21177996
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||  ||||||| ||||||||||||||||||   ||||||| |||||||||||  || |||||||| | ||||| ||||| |||||||||||    
T  21178092 gggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagtt-agggggggaaagtacactttagcct 21177996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 55602451 - 55602379
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||||||||| ||| ||| |||| ||||||||||| |||||||||||||  |||||||| |||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaa-aggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 14868990 - 14868889
Alignment:
Q  18 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||||||| || |||||||  ||| |||| |||||  || |||| || ||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  14868990 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 14868893  T
Q  118 gcct 121  Q
    ||||    
T  14868892 gcct 14868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 14876944 - 14877045
Alignment:
Q  18 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||||||| || |||||||  ||| |||| |||||  || |||| || ||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  14876944 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 14877041  T
Q  118 gcct 121  Q
    ||||    
T  14877042 gcct 14877045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 8194012 - 8194072
Alignment:
Q  262 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    ||||||| |||| | |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  8194012 atgaaaaagaaccgttatgtggtaattaaaagaaaa-ataataatgaaaaggaactgctata 8194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 46638723 - 46638803
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 97  Q
    ||||| ||| ||||||| |||||||| ||||||||| |||||||   ||||||| ||||||| |||  |||||||||||||    
T  46638723 tgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttgaaagttaa 46638803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 49306851 - 49306774
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg--aaaagtgcactttagcct 121  Q
    ||||||||||||||||||| |||   | ||||||||||||| ||||||||||   ||||||  ||||||||||||||||||    
T  49306851 caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagt---tgggggaaaaaagtgcactttagcct 49306774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 7e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 12700279 - 12700174
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||| |||||||||    
T  12700279 agatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcac 12700182  T
Q  114 tttagcct 121  Q
    ||||||||    
T  12700181 tttagcct 12700174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 54540788 - 54540892
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  54540788 tgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 54540887  T
Q  117 agcct 121  Q
    |||||    
T  54540888 agcct 54540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 8456580 - 8456479
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | |||| |||||||||||||    
T  8456580 tgcaatgaggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcacttt 8456482  T
Q  117 agc 119  Q
    |||    
T  8456481 agc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7267746 - 7267647
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  7267746 tgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttt 7267648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 29931329 - 29931225
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  || |||||||||||||||    
T  29931329 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29931230  T
Q  117 agcct 121  Q
    |||||    
T  29931229 agcct 29931225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 29980483 - 29980379
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  || |||||||||||||||    
T  29980483 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29980384  T
Q  117 agcct 121  Q
    |||||    
T  29980383 agcct 29980379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 12703495 - 12703601
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||  ||||||||||| |  ||| ||||||||||    
T  12703495 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcac 12703593  T
Q  114 tttagcct 121  Q
    ||||||||    
T  12703594 tttagcct 12703601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 7758508 - 7758401
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||| ||| |||| |||||| |||||||| |||||||||||||||||| |||||||  |||||||||||| ||||||||||||| |||| ||||||||||    
T  7758508 agatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcac 7758409  T
Q  114 tttagcct 121  Q
    ||||||||    
T  7758408 tttagcct 7758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 29932697 - 29932800
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||| ||||||| || |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  29932697 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 29932795  T
Q  117 agcct 121  Q
    |||||    
T  29932796 agcct 29932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 29981851 - 29981954
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||| ||||||| || |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  29981851 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 29981949  T
Q  117 agcct 121  Q
    |||||    
T  29981950 agcct 29981954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 47610578 - 47610678
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  47610578 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 47610677  T
Q  117 a 117  Q
    |    
T  47610678 a 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 54539849 - 54539754
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||| ||||||  |||||||||||||||||||||||||||   ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  54539849 gctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcct 54539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 47614291 - 47614185
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| | ||||||||| ||||||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||| ||||||||||    
T  47614291 agatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcac 47614192  T
Q  114 tttagcc 120  Q
    |||||||    
T  47614191 tttagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 22776809 - 22776914
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| |||||||| || |||||||||||||||||||||||||||  |||||| ||||||||||||  || |||||||||  || ||||||||||||||    
T  22776809 atgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactt 22776908  T
Q  116 tagcct 121  Q
    ||||||    
T  22776909 tagcct 22776914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 19984955 - 19984848
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| ||  ||| |||||||||||||||||||  |||||| ||||||||||||| |||||||| |||  |||||||||||||||    
T  19984955 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcac 19984856  T
Q  114 tttagcct 121  Q
    ||||||||    
T  19984855 tttagcct 19984848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 534594 - 534498
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||| |||||||||||||||||||||||||||  |||| |  |||||||||||| |||||| |||||  |||| ||||||||||||||||||    
T  534594 ggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcct 534498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 7268825 - 7268924
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||| ||||||| |||| ||||||||||||||||| | || ||||| | ||||||||||||| ||||||||||| | ||||||||||||||||||    
T  7268825 tgcaatgggactaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttt 7268923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 28262295 - 28262192
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||| | ||||||||||||||||||    
T  28262295 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtt-aggggggaaaagtgcacttt 28262197  T
Q  117 agcct 121  Q
    |||||    
T  28262196 agcct 28262192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 28263109 - 28263213
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| ||||| |||||||  ||||||||||||||||||    
T  28263109 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcacttt 28263208  T
Q  117 agcct 121  Q
    |||||    
T  28263209 agcct 28263213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 47609800 - 47609696
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  |||||||||||||| |||    
T  47609800 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcatttt 47609701  T
Q  117 agcct 121  Q
    |||||    
T  47609700 agcct 47609696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 52276407 - 52276303
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||| ||  ||||||||||||||||||    
T  52276407 tgcaatggggctaaaacatagggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttt 52276308  T
Q  117 agcct 121  Q
    |||||    
T  52276307 agcct 52276303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 52281545 - 52281649
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||| ||  ||||||||||||||||||    
T  52281545 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttt 52281644  T
Q  117 agcct 121  Q
    |||||    
T  52281645 agcct 52281649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 51470075 - 51469972
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| |||  | ||||||||||||||||    
T  51470075 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttt 51469976  T
Q  117 agcc 120  Q
    ||||    
T  51469975 agcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 52840602 - 52840705
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| ||||||||| |||||  || ||||||  ||||||||||||| ||||||||||||  || ||||||| |||||||    
T  52840602 tgcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcacttt 52840701  T
Q  117 agcc 120  Q
    ||||    
T  52840702 agcc 52840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 55192014 - 55192096
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||| ||||||||| | |||||||||||    
T  55192014 ggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagcct 55192096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 18442734 - 18442629
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactt 115  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||  | |||| ||||||| |||| |||||||||||||   ||||| |||||||||||    
T  18442734 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactt 18442635  T
Q  116 tagcct 121  Q
    ||||||    
T  18442634 tagcct 18442629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 19487808 - 19487703
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcactt 115  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||  | |||| ||||||| |||| |||||||||||||   ||||| |||||||||||    
T  19487808 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactt 19487709  T
Q  116 tagcct 121  Q
    ||||||    
T  19487708 tagcct 19487703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 40426785 - 40426877
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtat-ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||| | ||| ||||||  |||| |||||||| |||||||||||||||||||    
T  40426785 gctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 53614902 - 53614818
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||| ||| ||||||||||||| || |||||| |||||||||||||    
T  53614902 gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcct 53614818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 5029682 - 5029784
Alignment:
Q  18 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||||||| || |||||||  |||||||| ||||| ||| ||||| | ||||||||||||| ||||||||| | | |||||||||||||||||||    
T  5029682 gcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 5029780  T
Q  118 gcct 121  Q
    ||||    
T  5029781 gcct 5029784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 11671336 - 11671442
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||| || |||| |||||||||||||| ||||  |||||||||| |||||||||| | ||||||||||| ||||||||||| | | || ||||||||||    
T  11671336 agatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcac 11671434  T
Q  114 tttagcct 121  Q
    ||||||||    
T  11671435 tttagcct 11671442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 24516554 - 24516459
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||| || ||||||||||||||||||||| || ||||||  ||||||||||||| |||| |||||||  |||| ||||||||||||| ||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttggcct 24516459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 18456063 - 18456165
Alignment:
Q  19 caatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta-atgggggaaaagtgcacttta 117  Q
    ||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||   |||||||||||||||||||    
T  18456063 caatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcacttta 18456162  T
Q  118 gcc 120  Q
    |||    
T  18456163 gcc 18456165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 19986065 - 19986174
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagg--ggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 111  Q
    |||||||| |||| |||||| ||| ||| |||||||||||||||| ||  ||||  || ||||||||||||| |||||||| ||||  ||||||||||||    
T  19986065 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgc 19986164  T
Q  112 actttagcct 121  Q
    ||||||||||    
T  19986165 actttagcct 19986174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 47615592 - 47615650
Alignment:
Q  63 ttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  47615592 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 47615650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 535787 - 535883
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||||| |||||||  |||||| |||||||  || ||| ||||||||||||||||| ||||||||||||  || |||||||| ||||||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 51470453 - 51470556
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||| |||||||| ||||||  | ||||||| ||||| ||| |||||||| | |||||||||| ||||||||||| | ||||||| ||||||||||    
T  51470453 tgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcacttt 51470551  T
Q  117 agcct 121  Q
    |||||    
T  51470552 agcct 51470556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 23770402 - 23770505
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| |||||||| ||||||||||||||||||  || ||||||||||||| ||  |||| ||| |||| ||| ||||| |||||    
T  23770402 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcac 23770501  T
Q  114 ttta 117  Q
    ||||    
T  23770502 ttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 51037638 - 51037536
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||||||| || |||||||| |||||||||||||||||   ||| ||  |||||||||||  ||||||||||||| ||| ||||||||||||||    
T  51037638 tgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcacttt 51037540  T
Q  117 agcc 120  Q
    ||||    
T  51037539 agcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 46721217 - 46721322
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| ||||||||||| |||||| | ||||||||||||||||||  ||||||   ||||| ||||  |||| |||||||  ||| |||||||||||||    
T  46721217 atgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactt 46721316  T
Q  116 tagcct 121  Q
    ||||||    
T  46721317 tagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 5001275 - 5001199
Alignment:
Q  45 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| ||  || ||||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcct 5001199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 8876001 - 8875905
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||| |||||||||||||||||||||||||||  || ||| | |||||||||   ||||  || |||| ||| |||||||||||||||||||    
T  8876001 ggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcct 8875905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 46720037 - 46719941
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||||| ||| || | ||||||||||||||| ||  |||||| ||||||| ||||  |||| |||||||| ||||||||| ||||||||||||    
T  46720037 gggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 51038813 - 51038892
Alignment:
Q  42 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||||||||||||   ||||||  |||||||||||  |||| |||||||| || ||||||||||||||||||||    
T  51038813 ccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcct 51038892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 34019152 - 34019241
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||||  |||||| ||||||||||||| ||||||  ||||||  |||||||||||| |||||||||||||  |||||||| || ||||||    
T  34019152 gctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaa--ggggaaaaatgtacttta 34019241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 54987002 - 54987103
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| || |||||||| ||| ||| ||||||| |||||||| ||  |||||||| ||||| ||||  |||||||| |||  |||||||||||||||    
T  54987002 agatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcac 54987099  T
Q  114 ttta 117  Q
    ||||    
T  54987100 ttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 31645079 - 31645000
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaag 93  Q
    ||||||||  |||||||||| |||| ||  |||||||||||||||| | ||||||| ||||||||| ||| |||||||||    
T  31645079 agatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 49216341 - 49216247
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||| || |||| || ||||||||||||||||  ||||||  |||||||||||  |||||||| |||   | |||||||||||||||||||    
T  49216341 gctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 53901404 - 53901487
Alignment:
Q  35 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||||| ||||||||||||||| ||| ||   |||||||||||  |||| ||| |||  ||||||||||||||||||||||    
T  53901404 tagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagcc 53901487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 6170348 - 6170296
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    ||||||||| |||||||| ||| |||| |||||||||||| ||||||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagtta 6170296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 6249685 - 6249633
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    |||||||||||||||||| ||| ||||  ||||||||||| ||||||||||||    
T  6249685 aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 52839140 - 52839036
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||  ||| |||  |||||||| ||||| ||| |||| ||  ||||||| |||  ||||| ||||||  ||||||||| ||||||||    
T  52839140 tgcaatggggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcacttt 52839041  T
Q  117 agcct 121  Q
    |||||    
T  52839040 agcct 52839036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 23769939 - 23769856
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||| ||||||||||||||||| |  ||| |||  ||||||||||  | ||||||||||| || |||||||||||||| |||||    
T  23769939 ggggtcaaaattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcacttcagcct 23769856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 52104569 - 52104484
Alignment:
Q  28 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||| |||| |||||||||| |||||||||||  ||  ||||||||||| |||  ||||||||||||  |||||||||||||| ||||    
T  52104569 taaatcttaggtggccaaaattatagtttttgtacata--ggaccaaaattacaactttttgaaagtta--gggggaaaagtgcatttta 52104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 51347360 - 51347271
Alignment:
Q  28 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||| ||||||| |||||||||  |||||||   ||| |||||||||||||||  |||| ||| ||||  |||| |||||||||||||    
T  51347360 taaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcacttta 51347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 2e-30; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 12353359 - 12353461
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12353359 tgcaatggggctaaatcttagggggccaaaattatag-ttttgtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttt 12353456  T
Q  117 agcct 121  Q
    |||||    
T  12353457 agcct 12353461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 10007758 - 10007865
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| |||||| |||||||||| |||| | || ||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  10007758 agatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 10007857  T
Q  114 tttagcct 121  Q
    ||||||||    
T  10007858 tttagcct 10007865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 18979125 - 18979220
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 119  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  18979125 gggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 1824084 - 1824174
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  1824084 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 1858529 - 1858619
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  1858529 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 10006450 - 10006344
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  10006450 agatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 10006351  T
Q  114 tttagcc 120  Q
    |||||||    
T  10006350 tttagcc 10006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 29968335 - 29968434
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||    
T  29968335 tgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcacttt 29968433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 12352024 - 12351920
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||  |||||||||||  ||||||||||||| ||||| ||| ||||||||    
T  12352024 tgcaatgaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcacttt 12351925  T
Q  117 agcct 121  Q
    |||||    
T  12351924 agcct 12351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 5514087 - 5513981
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||  ||||||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||| ||||||||||    
T  5514087 agatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcac 5513989  T
Q  114 tttagcct 121  Q
    ||||||||    
T  5513988 tttagcct 5513981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 38980042 - 38980146
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  38980042 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 38980141  T
Q  117 agcct 121  Q
    |||||    
T  38980142 agcct 38980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 39011139 - 39011243
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  39011139 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 39011238  T
Q  117 agcct 121  Q
    |||||    
T  39011239 agcct 39011243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 22221359 - 22221466
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||| || ||||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  || ||||||||||||    
T  22221359 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcac 22221458  T
Q  114 tttagcct 121  Q
    ||||||||    
T  22221459 tttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 22227701 - 22227808
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||| || ||||||||||| ||||||| |||||||||||||||  || |||||||  |||||||||||| ||||||||||||  || ||||||||||||    
T  22227701 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcac 22227800  T
Q  114 tttagcct 121  Q
    ||||||||    
T  22227801 tttagcct 22227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 38974898 - 38974795
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  38974898 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 38974799  T
Q  117 agcc 120  Q
    ||||    
T  38974798 agcc 38974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 39005996 - 39005893
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  39005996 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 39005897  T
Q  117 agcc 120  Q
    ||||    
T  39005896 agcc 39005893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 18978122 - 18978029
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 111  Q
    ||||| ||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||||||||||||    
T  18978122 tgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 22220494 - 22220388
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||||| |||||||||||||||||||||||| ||  ||||||  ||||||||||||  ||| |||||||  |||||||||||||||    
T  22220494 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcac 22220395  T
Q  114 tttagcc 120  Q
    |||||||    
T  22220394 tttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 30335745 - 30335638
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| |||||||  ||||||||| |||||||| |||| |  ||||||||||||| |||| |||||||| || |||||| |||||    
T  30335745 agatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcac 30335646  T
Q  114 tttagcct 121  Q
    ||||||||    
T  30335645 tttagcct 30335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 43661818 - 43661925
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||| |||| ||||| ||||||||||||||| |||||||||||  ||| |||  ||||||||||  ||||||||||||| || ||||||||||||    
T  43661818 agatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcac 43661917  T
Q  114 tttagcct 121  Q
    || |||||    
T  43661918 ttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 1823648 - 1823551
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| |||||| || ||||||||||||||||| |||| ||  |||||||||||| |||| |||||||| |||| |||||| |||||||||||    
T  1823648 gggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 1858093 - 1857996
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| |||||| || ||||||||||||||||| |||| ||  |||||||||||| |||| |||||||| |||| |||||| |||||||||||    
T  1858093 gggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 32968560 - 32968455
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||||||||||||||||    
T  32968560 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactt 32968461  T
Q  116 tagcct 121  Q
    ||||||    
T  32968460 tagcct 32968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 40471156 - 40471244
Alignment:
Q  28 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||| || ||||| |||||||||||||||||||||| || |||||||||| ||| |||| |||||||| |||||||||||||||||||    
T  40471156 taaatcttaaggggctaaaattgtagtttttgtatttatgg-accaaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 8388564 - 8388463
Alignment:
Q  18 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||  |||||| | ||||||||||  |||| |||||||  ||||| |||||||||||||    
T  8388564 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcacttta 8388467  T
Q  118 gcct 121  Q
    ||||    
T  8388466 gcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 11282111 - 11282011
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||| |||||| ||||||| |||||||||  ||||||||| |||||| ||||||||||||  |||| |||||||| |||| |||||||||||||    
T  11282111 tgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttt 11282012  T
Q  117 a 117  Q
    |    
T  11282011 a 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 32207320 - 32207425
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| | ||||||||| || | |||||||||||||||||||||| ||||||   |||||||||||| ||||||| ||||  ||||| |||||||||    
T  32207320 agatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcac 32207417  T
Q  114 tttagcct 121  Q
    ||||||||    
T  32207418 tttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 43661371 - 43661267
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||  || ||||||||||||| ||  |||| ||| |||| ||  |||||||||||    
T  43661371 agatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcac 43661272  T
Q  114 tttag 118  Q
    |||||    
T  43661271 tttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 8389693 - 8389787
Alignment:
Q  23 ggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||| |||||| |||||| | ||||||||||||||||||  || ||||||||||||||||  |||||||| ||||  ||||||||||||||||||    
T  8389693 ggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 32973933 - 32974037
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  |||| ||||||||||||    
T  32973933 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactt 32974032  T
Q  116 tagcc 120  Q
    |||||    
T  32974033 tagcc 32974037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 24488678 - 24488756
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    ||||||||||||||||| || ||||| |||||||| |||||  |||||||||| ||||||||||||| ||||||||||||    
T  24488678 tgcaatggggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagtta 24488756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 11287861 - 11287779
Alignment:
Q  35 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||| |||| |||||||  || | ||||||||||||||    
T  11287861 tagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 18971013 - 18970920
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgc 111  Q
    ||||| |||| |||||| |  |||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | |||||||||||||    
T  18971013 tgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 45114537 - 45114618
Alignment:
Q  40 ggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||| ||||  ||| | |||||||||||||| ||||||||||||  || |||||||||||||| |||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 18488257 - 18488325
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaa 82  Q
    |||||||| |||| || ||| ||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  18488257 agatgcaaaggggttatatcttagagggccaaaattgtagtttttgtatataggggactaaaattgcaa 18488325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 24122976 - 24122882
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||| |||||| | |||||| ||||||||||| |||||||  |||||||||||  |||| |||||| | ||||||||| |||||||||||||    
T  24122976 gctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcct 24122882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 24123893 - 24123975
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    |||||||| ||||||||||| |||| ||| ||||||||| |||| ||| ||| | | ||||||||||||| ||||||||||||    
T  24123893 agatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagtta 24123975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 707
Target Start/End: Original strand, 33892692 - 33892802
Alignment:
Q  598 aagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaataatcccatca-acaatgtatgtaataacatg 696  Q
    ||||||||||||||| | |||| | |||||||||| | ||||||||  || ||||||||||||||||| ||| ||| || ||||  | ||||||||||||    
T  33892692 aagggaatctaaaatacagaagaccatgtatgtccctctaaaaatcttgcctaagaaaaataggtaaagaattccaccagacaacatttgtaataacatg 33892791  T
Q  697 accatgactag 707  Q
    ||||| |||||    
T  33892792 accataactag 33892802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 11456715 - 11456679
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattg 50  Q
    |||||||||||||||||||||||||||||||||||||    
T  11456715 agatgcaatggggctaaatcatagggggccaaaattg 11456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 665
Target Start/End: Original strand, 14164355 - 14164427
Alignment:
Q  593 gaacgaagggaatctaaaattcggaaggctatgtatgtccttgtaaaaatccagcttaagaaaaataggtaaa 665  Q
    |||| ||||||||||||||||| | || |  ||||||||||||||||||||| || ||| |||||||||||||    
T  14164355 gaactaagggaatctaaaattcagtagaccgtgtatgtccttgtaaaaatcctgcctaaaaaaaataggtaaa 14164427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 727 - 827
Target Start/End: Original strand, 14164474 - 14164574
Alignment:
Q  727 gaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggacttgatagagttcttttttct 826  Q
    ||||| ||||||| ||| ||||| ||||||||||||   ||||||||||||||||| ||||||  | ||||||||   ||| |||| |||||||||||||    
T  14164474 gaagcatctaatattccaatagaagaccttcattgagaaagaggagtaattgcacctttagaccggattttgtaggacactcgatatagttcttttttct 14164573  T
Q  827 g 827  Q
    |    
T  14164574 g 14164574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 11283207 - 11283310
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||  |||||| ||||||||||  ||||| ||  |||||| | |||||| |||  ||||||||||||| ||||| ||| ||||||||    
T  11283207 tgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttt 11283306  T
Q  117 agcc 120  Q
    ||||    
T  11283307 agcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 30336507 - 30336602
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||| ||| |||  |||||||||||||||||| ||||| | | ||||||  ||| ||||||||||||  |||| | |||||||||||||||    
T  30336507 ggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 30568992 - 30568886
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||  ||||||| |||||||||||  || | || |||||||| ||  |||||||| |||  ||||| |||||||||    
T  30568992 agatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaacttagaggggg-aaagtgcac 30568894  T
Q  114 tttagcct 121  Q
    ||||||||    
T  30568893 tttagcct 30568886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 42982676 - 42982759
Alignment:
Q  38 ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||| |||||||||||||||||| |  ||||| |||||||| |||  |||| ||| |||| || ||||||||||||||||||||    
T  42982676 ggggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcct 42982759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 24483201 - 24483143
Alignment:
Q  62 tttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||| ||||||||||||| |||||||| |||   |||||||||||||||||||||    
T  24483201 tttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 36249601 - 36249552
Alignment:
Q  71 ccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||||||  |||||||| |||| ||||||||||||||||||||||    
T  36249601 ccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 29043504 - 29043400
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||| ||| ||||||||||| ||| |||  ||||||||||||||||||  ||||||  |||||| || |  ||||||| ||||| || ||||||||| ||    
T  29043504 agatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaac 29043405  T
Q  114 tttag 118  Q
    |||||    
T  29043404 tttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 5003103 - 5003198
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagttttt-gtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| |||||| | |||||||| |||||| ||| |||||||   ||||||||||| ||||||||||||  ||||| ||||||| |||||||||    
T  5003103 gggctaaatcttaggggac-aaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagtta--ggggggaaagtgcgctttagcct 5003198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 23170034 - 23170098
Alignment:
Q  54 tttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||| |||||||| |||||||||||| |||||||| |||  ||||| ||| ||||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaatta--ggggggaaaatgcactttagcc 23170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 23842790 - 23842731
Alignment:
Q  264 gaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    |||||||||| | |||||||||||| |||||||| || ||||| ||||||||||| ||||    
T  23842790 gaaaaggaaccgttatgtggtaattaaaagaaaatatcataataaaaaggaactgatata 23842731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 5514294 - 5514371
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||||||||  | | ||||||||||| |||| ||| || | |||  ||||||||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaagtgcactttagcct 5514371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 11456694 - 11456637
Alignment:
Q  64 taggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||| ||||||||||||  |||||||| |||  ||| |||||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcct 11456637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 24359902 - 24359865
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtat 62  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  24359902 ggctaaatcttagggggtcaaaattgtagtttttgtat 24359865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 7e-30; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 7316289 - 7316396
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| || |||||||||||||| ||||   |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  7316289 agatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 7316388  T
Q  114 tttagcct 121  Q
    ||||||||    
T  7316389 tttagcct 7316396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 8659368 - 8659264
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  8659368 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 8659269  T
Q  117 agcct 121  Q
    |||||    
T  8659268 agcct 8659264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 8821976 - 8821872
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||| |||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  8821976 tgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 8821877  T
Q  117 agcct 121  Q
    |||||    
T  8821876 agcct 8821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 7314985 - 7314880
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||| ||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  7314985 agatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 7314887  T
Q  114 tttagcc 120  Q
    |||||||    
T  7314886 tttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 1829598 - 1829701
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| || |||||||  |||||||||||| |||| |||||||  |||  ||||||||||    
T  1829598 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcac 1829697  T
Q  114 ttta 117  Q
    ||||    
T  1829698 ttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 8822791 - 8822894
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||| |||||||||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||| | ||||||||||||||||    
T  8822791 tgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcacttt 8822890  T
Q  117 agcc 120  Q
    ||||    
T  8822891 agcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 16704521 - 16704599
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||| |||||||  |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  16704521 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcct 16704599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 10784696 - 10784591
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgg-gggaaaagtgcactt 115  Q
    ||||| ||||||||||| | |||||||||||||||||||||| || |||||||   ||||||||||| |||| |||||||| || |||||||||||||||    
T  10784696 tgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactt 10784597  T
Q  116 tagcct 121  Q
    ||||||    
T  10784596 tagcct 10784591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 3721715 - 3721611
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| || |||| | ||||| | ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  3721715 tgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 3721616  T
Q  117 agcct 121  Q
    |||||    
T  3721615 agcct 3721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 14822463 - 14822359
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||| | ||||||| |||||||||||||||||||||| | || ||| ||| ||||||||||||| |||||||| |||| ||| |||||||||||| |    
T  14822463 tgcaatgagactaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactct 14822364  T
Q  117 agcct 121  Q
    |||||    
T  14822363 agcct 14822359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 27437931 - 27437827
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| || |||||||| ||||||| |||||||||||||||| | | |||||| ||||||||||||  |||| |||||||| ||| ||||||||||||||    
T  27437931 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttt 27437832  T
Q  117 agcct 121  Q
    |||||    
T  27437831 agcct 27437827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 8660202 - 8660305
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||| |||||||| ||||||| | ||||||| ||||| ||| ||||||| | ||||||||||| ||||||||||||   |||||||||||||||||    
T  8660202 tgcaatggagctaaatcttaggggggctaaattgtggttttggtacttaggggtc-aaaattgcaagtttttgaaagttaggaggggaaaagtgcacttt 8660300  T
Q  117 agcct 121  Q
    |||||    
T  8660301 agcct 8660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 34834577 - 34834677
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| |||||  || ||||| || |||||||||||| ||||||||||||  | ||||||||||||||||    
T  34834577 tgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttt 34834676  T
Q  117 a 117  Q
    |    
T  34834677 a 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 27322067 - 27322169
Alignment:
Q  18 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||| |||||||| || |||||||  |||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||    
T  27322067 gcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 27322165  T
Q  118 gcct 121  Q
    ||||    
T  27322166 gcct 27322169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 16703652 - 16703570
Alignment:
Q  35 tagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||| ||||||||||||||||||||||  ||| |||||||||||| ||||||||| ||  ||||||||||||||||||||||    
T  16703652 tagggggctaaaattgtagtttttgtattta-tggatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagcc 16703570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 14823583 - 14823678
Alignment:
Q  27 ctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggg-gaaaagtgcactttagcct 121  Q
    ||||||| |||||||||||||||||||||| |||| ||| ||| | ||||||||||| |||| ||| |||| ||||  ||||||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcct 14823678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 6842308 - 6842385
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||||||||| |  |||||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcct 6842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 22536071 - 22536014
Alignment:
Q  264 gaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgcta 321  Q
    |||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  22536071 gaaaaggaagtgctatgtggtaactgaaagaaaaaataataatgaaaaggaactgcta 22536014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 26575063 - 26575131
Alignment:
Q  28 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    |||||| ||||||||||||||||||||||||||| ||| |||   ||||||||||| ||||||||||||    
T  26575063 taaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 3722533 - 3722609
Alignment:
Q  45 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcct 3722609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 6840298 - 6840193
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||  |||||| ||| ||| ||||||| ||||||||||||||| ||| ||||||| ||||  |||||||| ||||  |||| |||||||||    
T  6840298 agatgcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaa--gggggaaagtgcac 6840201  T
Q  114 tttagcct 121  Q
    || |||||    
T  6840200 ttcagcct 6840193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 26574721 - 26574618
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| || |||  |||||| |||||||||||| |||| ||  |||||||||||| ||||||||||||  || || ||| ||||||||    
T  26574721 tgcaaaggggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcacttt 26574623  T
Q  117 agcct 121  Q
    |||||    
T  26574622 agcct 26574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 825
Target Start/End: Original strand, 28299189 - 28299305
Alignment:
Q  709 cttatcagcacaagcttcgaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggactt 808  Q
    |||| ||| |||||| || |||||||||| | ||| ||||| ||||||||||||    ||||||||||| ||||||||||  ||||||| |||   |||     
T  28299189 cttaacagtacaagcatcaaagcctctaaaattccaatagaagaccttcattgagtaggaggagtaattacacccttagatcaggttttttaggaaactc 28299288  T
Q  809 gatagagttcttttttc 825  Q
    |||||||||||||||||    
T  28299289 gatagagttcttttttc 28299305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 825
Target Start/End: Complemental strand, 28512884 - 28512768
Alignment:
Q  709 cttatcagcacaagcttcgaagcctctaatagtccgatagaggaccttcattgaaccagaggagtaattgcacccttagactaggttttgtagtggactt 808  Q
    |||| ||| |||||| || |||||||||| | ||| ||||| ||||||||||||    ||||||||||| ||||||||||  ||||||| |||   |||     
T  28512884 cttaacagtacaagcatcaaagcctctaaaattccaatagaagaccttcattgagtaggaggagtaattacacccttagatcaggttttttaggaaactc 28512785  T
Q  809 gatagagttcttttttc 825  Q
    |||||||||||||||||    
T  28512784 gatagagttcttttttc 28512768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 10041174 - 10041224
Alignment:
Q  267 aaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaact 317  Q
    ||||||| | |||||||| ||||||||||||||||||||| ||||||||||    
T  10041174 aaggaactgttatgtggttattgaaagaaaaaataataatgaaaaggaact 10041224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 27318389 - 27318314
Alignment:
Q  45 aaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaa-gtgcactttagcct 121  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--gggggaaaaggtgcactttagcct 27318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 30495702 - 30495797
Alignment:
Q  24 gggctaaatcatag-ggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||||| ||| ||||||||||||||  ||||||||  |||||||  ||||| ||||  ||||||||||||  |||| |||||||||||||||||    
T  30495702 gggctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtta--ggggaaaaagtgcactttagcc 30495797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 3333024 - 3333128
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||  ||| |||  ||||||||||||||||||  |||||| ||||||| ||||  |||| ||| |||   ||||||||||||| |||    
T  3333024 tgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaattt 3333123  T
Q  117 agcct 121  Q
    |||||    
T  3333124 agcct 3333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 29473158 - 29473082
Alignment:
Q  39 gggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||||||||||  |||||||   ||||| |||||||||||||  |||| ||| |||| |||||||||||||||||    
T  29473158 gggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 10785911 - 10785990
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    ||||| ||||||||||| || ||||  |||||||||||||||||| |||||||   ||||||||||  |||| |||||||    
T  10785911 tgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtta 10785990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 527
Target Start/End: Original strand, 28299032 - 28299087
Alignment:
Q  472 taggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 527  Q
    |||||| ||||||||||| |||||   || ||||||||||||||||||||||||||    
T  28299032 taggttgacaccccgaagttgctcccatcatctaccacctgctctgaaattttatt 28299087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 28513041 - 28512986
Alignment:
Q  472 taggtttacaccccgaaggtgctcttgtcttctaccacctgctctgaaattttatt 527  Q
    |||||| ||||||||||| |||||   || ||||||||||||||||||||||||||    
T  28513041 taggttgacaccccgaagttgctcccatcatctaccacctgctctgaaattttatt 28512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 26717137 - 26717183
Alignment:
Q  72 caaaattgcaaggttttgaaagttaatgggggaaaagtgcactttag 118  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||||    
T  26717137 caaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 34831005 - 34830927
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtt 95  Q
    ||||||| ||||||||| ||||||| | ||||||| ||||| ||| ||||||| |||||  |||||  |||||||||||    
T  34831005 tgcaatgtggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaagtt 34830927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 2961596 - 2961551
Alignment:
Q  278 atgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||    
T  2961596 atgtggtaattgaatgaaaaaataataacgaaaaggaactgttata 2961551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 5658852 - 5658759
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    |||||||||| || |||  |||||||||||||||||||  ||||| || ||||||  ||  |||| ||| |||| ||||||||| |||||||||    
T  5658852 gggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 61454 - 61559
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||| |||||||| |||| || ||||||||||||    
T  61454 agatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcac 61553  T
Q  114 tttagc 119  Q
    ||||||    
T  61554 tttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 60196 - 60090
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||||||||||| |||||||||||||||| ||  ||||||  |||||||||||| |||| |||||||  || ||||||||||||    
T  60196 agatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcac 60097  T
Q  114 tttagcc 120  Q
    |||||||    
T  60096 tttagcc 60090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 4e-28; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 31659726 - 31659622
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatggggg-aaaagtgcactt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||| ||| ||||||||||||  ||||| ||||||||||||    
T  31659726 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactt 31659627  T
Q  116 tagcc 120  Q
    |||||    
T  31659626 tagcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 7500560 - 7500454
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||||||||||||||| |||| | || |||| ||| |||||||||||| ||||||||||||| |||||||||||||||    
T  7500560 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaa-gggggaaaagtgcac 7500462  T
Q  114 tttagcct 121  Q
    ||||||||    
T  7500461 tttagcct 7500454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 18371518 - 18371424
Alignment:
Q  26 gctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  18371518 gctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 3227592 - 3227696
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||  | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  3227592 tgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 3227691  T
Q  117 agcct 121  Q
    |||||    
T  3227692 agcct 3227696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 22630458 - 22630554
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||| |||| |||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  22630458 ggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcct 22630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 31949800 - 31949904
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||  | ||||||| ||||| ||||||||||| ||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  31949800 tgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcacttt 31949899  T
Q  117 agcct 121  Q
    |||||    
T  31949900 agcct 31949904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 7501847 - 7501954
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||| ||| || |||||||||||||| |||||  || ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  7501847 agatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 7501946  T
Q  114 tttagcct 121  Q
    ||||||||    
T  7501947 tttagcct 7501954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 14999150 - 14999249
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||| || | |||||||||||||||    
T  14999150 agatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaa-gttttgaaaatt-aggggggaaaagtgcac 14999247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 17782558 - 17782655
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 17782655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 127438 - 127336
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||| |||||||||| |||||||| ||| |||| ||||| ||| ||||||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  127438 tgcaattgggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttt 127341  T
Q  117 agcct 121  Q
    |||||    
T  127340 agcct 127336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 21505520 - 21505415
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| || |||| |||||||||||||||||||| | |||| ||||||| ||||  ||||||||||||  |||||||||||||||    
T  21505520 agatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcac 21505423  T
Q  114 tttagcct 121  Q
    ||||||||    
T  21505422 tttagcct 21505415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 22629592 - 22629482
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa---tgggggaaaagtg 110  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||||| ||||    ||||||||| ||    
T  22629592 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatg 22629493  T
Q  111 cactttagcct 121  Q
    |||||||||||    
T  22629492 cactttagcct 22629482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 31949425 - 31949321
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| |||  | ||||||||||||||||    
T  31949425 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttt 31949326  T
Q  117 agcct 121  Q
    |||||    
T  31949325 agcct 31949321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 42886281 - 42886384
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||||| |||||||| ||||||||||||||||||||||||||  |||||||||||  ||||||||||||   || |||||||||||    
T  42886281 agatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcac 42886380  T
Q  114 ttta 117  Q
    ||||    
T  42886381 ttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 47525365 - 47525468
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| ||||||| | ||||||| |||||  || ||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||    
T  47525365 tgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 47525464  T
Q  117 agcc 120  Q
    ||||    
T  47525465 agcc 47525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 18372452 - 18372530
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaa 92  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  18372452 agatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaa 18372530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 17781764 - 17781663
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| |||||||   ||||||| ||||| ||| |||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  17781764 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttt 17781665  T
Q  117 ag 118  Q
    ||    
T  17781664 ag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 11658457 - 11658378
Alignment:
Q  42 ccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||||  |||||| | ||||||||| | ||||||||||||| |||||||||||||| ||||||||    
T  11658457 ccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcct 11658378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 3227210 - 3227109
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||| || |||| | ||||||| ||||| ||| ||||||| ||||||||||||| |||||||| || | ||||| ||||||||||||    
T  3227210 tgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcacttt 3227112  T
Q  117 agc 119  Q
    |||    
T  3227111 agc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 128599 - 128699
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||||||| |||| ||||||| | ||||||| ||||| ||| |||||||  |||||||||||  ||||||||||||  | ||||||||||||||||    
T  128599 tgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttt 128698  T
Q  117 a 117  Q
    |    
T  128699 a 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11662549 - 11662649
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| |||||||| || | ||||||||||||| |||||||||||  ||| |  | ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  11662549 tgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttt 11662648  T
Q  117 a 117  Q
    |    
T  11662649 a 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 47369887 - 47369780
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| ||||||||||| || |||||||||||| ||||||||||| ||| | | | ||||||||||| ||||||||||||  ||   |||||||||     
T  47369887 agatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcat 47369788  T
Q  114 tttagcct 121  Q
    ||||||||    
T  47369787 tttagcct 47369780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 34174010 - 34174084
Alignment:
Q  46 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||| ||||| ||| ||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 34174084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  46 aattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 20163585 - 20163658
Alignment:
Q  48 ttgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||  |||||  ||||||||||||| ||||||||||||  || ||| ||||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 34352795 - 34352888
Alignment:
Q  28 taaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||| ||| ||||||||||| |||||| |||| ||| ||||||||||| | ||| |||||||| |||  || | ||||||||||||||||||    
T  34352795 taaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcct 34352888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 48934927 - 48935004
Alignment:
Q  43 caaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||| ||||||||||| |||| ||  ||||||| |||| ||||||||||||  || |||||| ||||||||||||    
T  48934927 caaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 10024277 - 10024329
Alignment:
Q  263 tgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaa 315  Q
    ||||||||||| ||||||| ||||  |||||||||||||||||| ||||||||    
T  10024277 tgaaaaggaactgctatgtcgtaaccgaaagaaaaaataataataaaaaggaa 10024329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 30439356 - 30439459
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| |||||| | |||||||||||||||| |  ||||  | |||||| | ||  ||||||||||||| ||||  ||||||||||||    
T  30439356 tgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaagttaa-ggggagaaagtgcacttt 30439454  T
Q  117 agcct 121  Q
    |||||    
T  30439455 agcct 30439459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 43899525 - 43899469
Alignment:
Q  41 gccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 97  Q
    |||||||||||| ||||| |||||||  || |||||||||||| |||||||||||||    
T  43899525 gccaaaattgtaatttttatatttagaagatcaaaattgcaagtttttgaaagttaa 43899469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 10024334 - 10024380
Alignment:
Q  277 tatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    |||||| |||||||||||| |||||||||| |||| |||||||||||    
T  10024334 tatgtgataattgaaagaataaataataatgaaaatgaactgctata 10024380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 14998086 - 14998048
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgta 52  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  14998086 agatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 15681651 - 15681594
Alignment:
Q  64 taggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||||||| ||||  |||| ||| |||||||| ||||||| |||||||||||    
T  15681651 taggggaccaaaatcgcaactttttaaaacttaatgggtgaaaagttcactttagcct 15681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 19594 - 19487
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    |||||||| |||| |||||| ||||||  |||||||||||||||| || ||||||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  19594 agatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcac 19495  T
Q  114 tttagcct 121  Q
    ||||||||    
T  19494 tttagcct 19487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 337 - 233
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||| |||||||| || |||||| |||||||| |||||||||||  |||||||||||||||||||  ||||||||||||| ||||| |||||||||||    
T  337 atgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactt 238  T
Q  116 tagcc 120  Q
    |||||    
T  237 tagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 975 - 1056
Alignment:
Q  16 atgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaa 97  Q
    |||||| |||||||| || | ||||||||||||| |||||||||||  || ||||||||||||||||  |||| ||||||||    
T  975 atgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaa 1056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 17553 - 17469
Alignment:
Q  37 gggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  17553 gggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcct 17469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 18774 - 18877
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||||  || |||||||||||| |||||||||||  |||||||||||||||||||  |||| |||||||   ||| |||||||||||||    
T  18774 tgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcacttt 18873  T
Q  117 agcc 120  Q
    ||||    
T  18874 agcc 18877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 5439 - 5540
Alignment:
Q  20 aatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 119  Q
    |||||||||||||| || |||| ||||||||||||||||||| ||| |||  |||||||||||| |||||||| |||  |||||||||||||||||||||    
T  5439 aatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagc 5538  T
Q  120 ct 121  Q
    ||    
T  5539 ct 5540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 4542 - 4441
Alignment:
Q  20 aatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagc 119  Q
    |||||||||||||  |||||||  ||||||||| |||||||| ||| ||| | ||||||| ||| |||||||| |||  |||| ||| ||||||||||||    
T  4542 aatggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagc 4443  T
Q  120 ct 121  Q
    ||    
T  4442 ct 4441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 117 - 220
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| ||||||||||||||||||| |||||  ||  | |||| ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  117 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 216  T
Q  117 agcc 120  Q
    ||||    
T  217 agcc 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 49431 - 49535
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| || |||||||| ||||||| |||||||||||||||| | | |||||| ||||||||||||  |||| |||||||| ||| ||||||||||||||    
T  49431 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttt 49530  T
Q  117 agcct 121  Q
    |||||    
T  49531 agcct 49535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 3306 - 3409
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| |||||| |||||||| |||||||||||  || |||  |||||||| ||| ||||||||| ||| ||||||||||||||||||    
T  3306 tgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcacttt 3404  T
Q  117 agcct 121  Q
    |||||    
T  3405 agcct 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 2463 - 2564
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaag-gttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||||  |||||||| |||||||||||||| || ||||||||| |||||||  ||||||||||||  ||||||||||||  |||||||||||||||||    
T  2463 tgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactt 2560  T
Q  116 tagc 119  Q
    ||||    
T  2561 tagc 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 7086 - 7187
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaag-gttttgaaagttaatgggggaaaagtgcactt 115  Q
    |||||||  |||||||| |||||||||||||| || ||||||||| |||||||  ||||||||||||  ||||||||||||  |||||||||||||||||    
T  7086 tgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactt 7183  T
Q  116 tagc 119  Q
    ||||    
T  7184 tagc 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 1545 - 1438
Alignment:
Q  14 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcac 113  Q
    ||||||||  |||||||||| ||||||| ||||||| |||||||| ||  ||||||  |||||||||||| |||| |||||||  ||||||||||| |||    
T  1545 agatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacac 1446  T
Q  114 tttagcct 121  Q
    ||||||||    
T  1445 tttagcct 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 37248 - 37148
Alignment:
Q  19 caatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgc-aaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| |||||||  ||||||||| ||  |||| |||| ||  |||||||||||||||||||    
T  37248 caatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata--gggggaaaagtgcacttta 37151  T
Q  118 gcc 120  Q
    |||    
T  37150 gcc 37148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 23182 - 23081
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||||||||||||| | ||||||  ||| ||||| ||||| ||| |||| ||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  23182 tgcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttt 23085  T
Q  117 agcc 120  Q
    ||||    
T  23084 agcc 23081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 23887 - 23992
Alignment:
Q  17 tgcaatggggctaaatc--atagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcact 114  Q
    |||||||||||||||||  ||||||||  ||| |||| |||||  |||||||||  ||||||||||||| ||||||||||||  | |  |||||||||||    
T  23887 tgcaatggggctaaatcctataggggga-aaagttgttgttttgatatttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcact 23985  T
Q  115 ttagcct 121  Q
    |||||||    
T  23986 ttagcct 23992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 4728 - 4829
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    |||||||||||||||   ||| ||| |||||||||||||| |||||||||||| ||||||||||| | |||| |||||| | || || ||||||||||||    
T  4728 tgcaatggggctaaaatttagagggtcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcacttt 4826  T
Q  117 agc 119  Q
    |||    
T  4827 agc 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 3778 - 3699
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagtta 96  Q
    ||||||| ||||||||| |||||| | |||||| |||||| | || | ||||| ||||||||||||| ||||||||||||    
T  3778 tgcaatgcggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 6438 - 6346
Alignment:
Q  25 ggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttta 117  Q
    ||||||||| ||||||| |||||||||||||||||||  |||||| | ||||| | ||  |||||||| |||| || ||||||||||||||||    
T  6438 ggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 9032 - 9127
Alignment:
Q  24 gggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcct 121  Q
    |||||||||| |||||| ||||||||||||||||||||  |||| | | |||||  |||  |||||||| |||| | || ||||||||||||||||||    
T  9032 gggctaaatcttagggg-ccaaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaa-ttaaggaggaaaaagtgcactttagcct 9127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 7413 - 7517
Alignment:
Q  17 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcacttt 116  Q
    ||||| ||||||||||| ||||||| |||||||||||||| ||||  ||||||  |||||| | ||  |||| ||| |||  |||||| |||||||||||    
T  7413 tgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcacttt 7512  T
Q  117 agcct 121  Q
    |||||    
T  7513 agcct 7517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 49109 - 49185
Alignment:
Q  44 aaaattgtagtttttgtatttaggggaccaaaattgcaaggttttgaaagttaatgggggaaaagtgcactttagcc 120  Q
    ||||||||||||||  || ||||| | ||||||||||||| |||| |||||||| || ||||||||||| |||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 8401 - 8341
Alignment:
Q  262 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    ||||||| |||| | |||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  8401 atgaaaaagaaccgttatgtggtaattaaaagaaaaa-taataatgaaaaggaactgctata 8341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 18314 - 18254
Alignment:
Q  262 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    ||||||| |||| | |||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  18314 atgaaaaagaaccgttatgtggtaattaaaagaaaaa-taataatgaaaaggaactgctata 18254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 20668 - 20728
Alignment:
Q  262 atgaaaaggaacagctatgtggtaattgaaagaaaaaataataatcaaaaggaactgctata 323  Q
    ||||||| |||| | |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  20668 atgaaaaagaaccgttatgtggtaattaaaagaaaa-ataataatgaaaaggaactgctata 20728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 2418 times since January 2019
Visitors: 3819