View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0622_low_74 (Length: 375)

Name: NF0622_low_74
Description: NF0622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0622_low_74
NF0622_low_74
[»] chr8 (80 HSPs)
chr8 (40-261)||(43166689-43166907)
chr8 (40-261)||(14782134-14782352)
chr8 (40-261)||(44725809-44726027)
chr8 (40-261)||(10295379-10295598)
chr8 (40-261)||(18958726-18958944)
chr8 (40-261)||(9288456-9288674)
chr8 (40-261)||(19717880-19718098)
chr8 (40-261)||(39467467-39467685)
chr8 (127-261)||(4403180-4403314)
chr8 (42-261)||(26856057-26856274)
chr8 (40-254)||(24501819-24502030)
chr8 (42-254)||(26374436-26374645)
chr8 (40-261)||(18305970-18306178)
chr8 (40-254)||(42938123-42938334)
chr8 (40-261)||(7466324-7466532)
chr8 (40-261)||(32497514-32497722)
chr8 (40-254)||(42937342-42937551)
chr8 (40-254)||(2704825-2705036)
chr8 (8-261)||(39189815-39190061)
chr8 (40-261)||(16362185-16362393)
chr8 (40-254)||(42735283-42735494)
chr8 (72-254)||(7506905-7507084)
chr8 (40-250)||(23115179-23115385)
chr8 (40-254)||(5576626-5576838)
chr8 (1-113)||(39467654-39467764)
chr8 (126-251)||(10392246-10392371)
chr8 (126-261)||(37857191-37857316)
chr8 (40-261)||(42305794-42306002)
chr8 (1-113)||(7466244-7466355)
chr8 (1-113)||(14782321-14782432)
chr8 (1-113)||(44725996-44726107)
chr8 (1-113)||(18958913-18959024)
chr8 (1-109)||(32497392-32497499)
chr8 (40-113)||(18306147-18306220)
chr8 (45-261)||(31623689-31623882)
chr8 (1-113)||(4031444-4031555)
chr8 (1-113)||(42305971-42306082)
chr8 (1-113)||(16362105-16362216)
chr8 (1-113)||(19718067-19718178)
chr8 (133-254)||(4950022-4950143)
chr8 (40-113)||(32497472-32497545)
chr8 (3-105)||(4403018-4403119)
chr8 (1-113)||(26855977-26856086)
chr8 (42-254)||(41479088-41479287)
chr8 (1-112)||(10295568-10295678)
chr8 (40-175)||(32711367-32711499)
chr8 (40-182)||(4031336-4031475)
chr8 (134-241)||(13478269-13478376)
chr8 (9-113)||(31623612-31623715)
chr8 (40-113)||(2705005-2705078)
chr8 (40-113)||(5576807-5576880)
chr8 (40-113)||(23115354-23115427)
chr8 (40-113)||(43959605-43959678)
chr8 (197-244)||(4031294-4031341)
chr8 (132-203)||(8410455-8410526)
chr8 (42-113)||(32711468-32711539)
chr8 (131-197)||(43959734-43959800)
chr8 (40-113)||(41479044-41479117)
chr8 (40-113)||(42735463-42735536)
chr8 (40-113)||(42938303-42938376)
chr8 (1-113)||(9288643-9288747)
chr8 (45-104)||(41069896-41069955)
chr8 (40-96)||(31623726-31623782)
chr8 (135-182)||(9770498-9770545)
chr8 (40-113)||(26374616-26374687)
chr8 (40-96)||(7507018-7507074)
chr8 (40-96)||(26374549-26374605)
chr8 (40-113)||(7507085-7507158)
chr8 (47-96)||(9770936-9770985)
chr8 (75-108)||(24214824-24214857)
chr8 (76-108)||(2705052-2705084)
chr8 (76-108)||(7507132-7507164)
chr8 (49-113)||(9771003-9771067)
chr8 (76-108)||(23115401-23115433)
chr8 (76-108)||(26373746-26373778)
chr8 (76-108)||(41479038-41479070)
chr8 (40-96)||(41479128-41479184)
chr8 (76-108)||(42735510-42735542)
chr8 (76-108)||(42938350-42938382)
chr8 (76-108)||(43959599-43959631)
[»] chr6 (34 HSPs)
chr6 (1-260)||(7497026-7497280)
chr6 (40-260)||(34759050-34759268)
chr6 (40-261)||(31895684-31895902)
chr6 (40-261)||(14262432-14262650)
chr6 (40-254)||(34773397-34773608)
chr6 (40-254)||(6197484-6197695)
chr6 (40-254)||(2300744-2300955)
chr6 (131-261)||(31067569-31067689)
chr6 (72-250)||(1391644-1391819)
chr6 (40-261)||(30385068-30385274)
chr6 (72-254)||(7051865-7052044)
chr6 (48-246)||(28002661-28002856)
chr6 (146-261)||(4200436-4200541)
chr6 (1-113)||(31895604-31895715)
chr6 (3-113)||(34773319-34773428)
chr6 (8-113)||(14262619-14262723)
chr6 (134-251)||(29076678-29076795)
chr6 (134-251)||(29111652-29111769)
chr6 (40-113)||(2300924-2300997)
chr6 (57-113)||(34759237-34759293)
chr6 (43-113)||(6197664-6197734)
chr6 (1-113)||(7051753-7051864)
chr6 (40-113)||(1391570-1391643)
chr6 (57-113)||(30385243-30385299)
chr6 (44-113)||(3848114-3848183)
chr6 (40-113)||(29076544-29076617)
chr6 (40-113)||(29111517-29111590)
chr6 (40-182)||(3848200-3848337)
chr6 (40-113)||(28002611-28002684)
chr6 (43-155)||(656957-657065)
chr6 (40-96)||(1391654-1391710)
chr6 (40-94)||(656995-657049)
chr6 (76-108)||(1391564-1391596)
chr6 (76-108)||(2300971-2301003)
[»] chr3 (138 HSPs)
chr3 (11-261)||(17946248-17946494)
chr3 (40-261)||(18749600-18749818)
chr3 (40-261)||(36674130-36674348)
chr3 (40-261)||(44906513-44906731)
chr3 (40-261)||(34484030-34484248)
chr3 (40-261)||(51737726-51737945)
chr3 (40-261)||(11431514-11431732)
chr3 (40-261)||(40897132-40897350)
chr3 (131-261)||(54628920-54629050)
chr3 (126-261)||(32580247-32580382)
chr3 (126-261)||(26107332-26107467)
chr3 (1-261)||(52810328-52810584)
chr3 (50-261)||(48379155-48379363)
chr3 (40-261)||(50903240-50903461)
chr3 (43-261)||(52617971-52618180)
chr3 (40-254)||(10139153-10139364)
chr3 (40-254)||(19253815-19254026)
chr3 (131-261)||(31646286-31646414)
chr3 (42-254)||(20498199-20498408)
chr3 (9-261)||(10728651-10728889)
chr3 (40-254)||(996093-996304)
chr3 (76-254)||(3206212-3206387)
chr3 (72-254)||(33807805-33807985)
chr3 (40-254)||(3999652-3999863)
chr3 (40-261)||(37820477-37820695)
chr3 (72-254)||(6589584-6589763)
chr3 (44-250)||(20832984-20833187)
chr3 (72-261)||(54625612-54625798)
chr3 (45-261)||(6035053-6035266)
chr3 (42-261)||(39038030-39038236)
chr3 (40-261)||(44762037-44762255)
chr3 (42-261)||(37454851-37455057)
chr3 (126-254)||(29448865-29448993)
chr3 (47-254)||(33996548-33996752)
chr3 (40-250)||(25418354-25418561)
chr3 (40-250)||(40246832-40247039)
chr3 (132-254)||(5825139-5825261)
chr3 (1-113)||(27240430-27240541)
chr3 (1-113)||(44906700-44906811)
chr3 (1-113)||(54628751-54628862)
chr3 (75-251)||(35337758-35337930)
chr3 (126-261)||(50762060-50762185)
chr3 (72-251)||(53929138-53929314)
chr3 (1-113)||(10660443-10660554)
chr3 (9-113)||(18749486-18749589)
chr3 (1-113)||(36674317-36674428)
chr3 (1-261)||(39842494-39842727)
chr3 (3-113)||(50762237-50762346)
chr3 (8-254)||(27899301-27899533)
chr3 (1-110)||(31646474-31646582)
chr3 (1-113)||(40897051-40897163)
chr3 (1-113)||(11431434-11431545)
chr3 (1-113)||(50903430-50903541)
chr3 (40-253)||(29029994-29030203)
chr3 (40-195)||(10660523-10660675)
chr3 (197-261)||(45862983-45863047)
chr3 (8-113)||(23753573-23753677)
chr3 (131-246)||(51699495-51699610)
chr3 (40-261)||(23753407-23753604)
chr3 (131-226)||(22057838-22057933)
chr3 (1-113)||(51737914-51738023)
chr3 (74-203)||(1440010-1440136)
chr3 (40-260)||(44276377-44276580)
chr3 (126-254)||(52114600-52114728)
chr3 (1-113)||(52618152-52618263)
chr3 (178-254)||(6131240-6131316)
chr3 (40-113)||(19253773-19253846)
chr3 (40-113)||(37820664-37820737)
chr3 (40-113)||(44762224-44762297)
chr3 (40-108)||(3206388-3206456)
chr3 (126-217)||(55235255-55235347)
chr3 (126-189)||(539476-539539)
chr3 (8-113)||(35337650-35337754)
chr3 (158-251)||(1439904-1439997)
chr3 (40-113)||(1440140-1440212)
chr3 (40-113)||(20498155-20498228)
chr3 (1-113)||(20832903-20833011)
chr3 (1-113)||(26107169-26107280)
chr3 (42-113)||(51699666-51699737)
chr3 (40-102)||(10139344-10139406)
chr3 (46-182)||(23535890-23536023)
chr3 (7-110)||(44276266-44276363)
chr3 (40-113)||(996273-996345)
chr3 (3-113)||(6035240-6035348)
chr3 (61-113)||(34484217-34484269)
chr3 (8-113)||(48379073-48379176)
chr3 (186-261)||(15492867-15492942)
chr3 (42-113)||(25418314-25418385)
chr3 (40-110)||(6975695-6975765)
chr3 (43-113)||(44276338-44276408)
chr3 (52-113)||(3999832-3999893)
chr3 (7-113)||(12103544-12103648)
chr3 (131-175)||(52080003-52080047)
chr3 (40-96)||(52618085-52618141)
chr3 (40-179)||(6975737-6975870)
chr3 (42-113)||(54625540-54625611)
chr3 (8-113)||(29449045-29449151)
chr3 (40-113)||(6589510-6589583)
chr3 (40-93)||(28146139-28146192)
chr3 (44-113)||(33807986-33808055)
chr3 (40-113)||(40246790-40246863)
chr3 (40-96)||(3206325-3206381)
chr3 (42-102)||(6131411-6131470)
chr3 (40-96)||(20498239-20498295)
chr3 (40-96)||(20833022-20833078)
chr3 (40-96)||(26107291-26107347)
chr3 (40-96)||(35337765-35337821)
chr3 (40-96)||(48379187-48379243)
chr3 (40-96)||(53929248-53929304)
chr3 (40-104)||(54628831-54628895)
chr3 (9-107)||(55235103-55235199)
chr3 (1-93)||(539588-539679)
chr3 (42-113)||(29029954-29030025)
chr3 (211-254)||(33807687-33807730)
chr3 (42-96)||(1440072-1440126)
chr3 (42-96)||(45134909-45134963)
chr3 (40-113)||(52114476-52114547)
chr3 (76-113)||(2024147-2024184)
chr3 (40-109)||(2024153-2024222)
chr3 (42-107)||(6131322-6131387)
chr3 (198-239)||(12103733-12103774)
chr3 (72-113)||(22057739-22057780)
chr3 (40-96)||(52114558-52114615)
chr3 (40-96)||(539524-539580)
chr3 (76-108)||(996319-996351)
chr3 (76-108)||(3206430-3206462)
chr3 (40-96)||(6589594-6589650)
chr3 (76-108)||(10139380-10139412)
chr3 (40-100)||(18749558-18749618)
chr3 (76-108)||(19253767-19253799)
chr3 (76-108)||(20498149-20498181)
chr3 (76-108)||(37820711-37820743)
chr3 (40-92)||(39038070-39038122)
chr3 (76-108)||(40246784-40246816)
chr3 (76-108)||(44762271-44762303)
chr3 (48-96)||(50762170-50762218)
chr3 (72-104)||(52114548-52114580)
chr3 (40-96)||(54625622-54625678)
[»] scaffold0042 (1 HSPs)
scaffold0042 (8-261)||(58076-58325)
[»] chr7 (135 HSPs)
chr7 (40-261)||(3022909-3023127)
chr7 (40-261)||(23101281-23101499)
chr7 (40-261)||(28034804-28035022)
chr7 (40-261)||(28342330-28342548)
chr7 (40-261)||(39784082-39784300)
chr7 (40-260)||(29614764-29614981)
chr7 (42-261)||(18838374-18838590)
chr7 (41-261)||(33382621-33382838)
chr7 (44-261)||(7993129-7993343)
chr7 (42-261)||(9882236-9882451)
chr7 (75-261)||(8675351-8675534)
chr7 (126-261)||(12740439-12740573)
chr7 (72-254)||(18914741-18914920)
chr7 (40-254)||(43581096-43581307)
chr7 (40-261)||(47914256-47914474)
chr7 (42-254)||(973176-973385)
chr7 (72-254)||(7718368-7718547)
chr7 (3-261)||(509603-509847)
chr7 (40-261)||(44256765-44256983)
chr7 (40-261)||(47879158-47879376)
chr7 (72-254)||(7719266-7719445)
chr7 (8-220)||(10676460-10676668)
chr7 (40-254)||(30440786-30440997)
chr7 (146-261)||(37972866-37972981)
chr7 (72-254)||(40996655-40996834)
chr7 (42-261)||(44121909-44122115)
chr7 (40-254)||(12893398-12893609)
chr7 (72-254)||(34695295-34695474)
chr7 (158-261)||(41827402-41827505)
chr7 (40-254)||(44343402-44343613)
chr7 (40-254)||(39219383-39219594)
chr7 (72-254)||(20275269-20275448)
chr7 (40-226)||(32883765-32883948)
chr7 (40-261)||(37327910-37328118)
chr7 (126-261)||(43187356-43187491)
chr7 (40-261)||(46405440-46405648)
chr7 (40-233)||(12963684-12963874)
chr7 (40-251)||(10068449-10068658)
chr7 (130-261)||(32142916-32143047)
chr7 (40-261)||(40460716-40460924)
chr7 (1-113)||(17001209-17001320)
chr7 (1-261)||(29585460-29585705)
chr7 (1-113)||(29614950-29615061)
chr7 (1-113)||(48117779-48117890)
chr7 (40-254)||(34009002-34009214)
chr7 (8-113)||(37327837-37327941)
chr7 (40-193)||(19251522-19251672)
chr7 (1-113)||(33382540-33382651)
chr7 (131-231)||(43679492-43679592)
chr7 (1-113)||(23101201-23101312)
chr7 (1-113)||(28342250-28342361)
chr7 (9-113)||(39028008-39028111)
chr7 (1-113)||(39784002-39784113)
chr7 (3-113)||(41827219-41827328)
chr7 (131-254)||(7113530-7113653)
chr7 (8-109)||(7993052-7993152)
chr7 (46-251)||(33892269-33892461)
chr7 (40-261)||(39028080-39028288)
chr7 (1-113)||(19251442-19251553)
chr7 (2-113)||(40460893-40461003)
chr7 (6-113)||(12963609-12963715)
chr7 (8-113)||(9882422-9882526)
chr7 (1-110)||(18838292-18838400)
chr7 (1-113)||(12740276-12740387)
chr7 (9-111)||(46405619-46405720)
chr7 (1-113)||(3022829-3022940)
chr7 (135-261)||(19810874-19810990)
chr7 (131-230)||(25805763-25805862)
chr7 (8-108)||(34695148-34695247)
chr7 (40-261)||(17001042-17001240)
chr7 (197-257)||(47066821-47066881)
chr7 (1-113)||(43187529-43187640)
chr7 (40-113)||(12893356-12893429)
chr7 (40-113)||(30440744-30440817)
chr7 (40-113)||(43581276-43581349)
chr7 (40-113)||(44343582-44343655)
chr7 (42-182)||(44623354-44623491)
chr7 (134-241)||(727594-727691)
chr7 (72-254)||(9179895-9180064)
chr7 (1-113)||(32883684-32883796)
chr7 (1-79)||(37972994-37973071)
chr7 (126-182)||(47066770-47066826)
chr7 (8-109)||(10068376-10068476)
chr7 (42-113)||(28034991-28035061)
chr7 (126-193)||(31638948-31639015)
chr7 (40-113)||(973132-973205)
chr7 (40-113)||(34695221-34695294)
chr7 (40-113)||(40996835-40996908)
chr7 (1-87)||(21067785-21067870)
chr7 (4-113)||(44256952-44257060)
chr7 (40-96)||(48154750-48154806)
chr7 (9-113)||(3797243-3797346)
chr7 (43-113)||(31638826-31638896)
chr7 (40-113)||(727460-727533)
chr7 (48-188)||(3797129-3797266)
chr7 (40-113)||(47879116-47879189)
chr7 (40-113)||(47914214-47914287)
chr7 (45-113)||(34008965-34009033)
chr7 (42-113)||(44122086-44122158)
chr7 (131-190)||(447854-447913)
chr7 (40-111)||(18914923-18914994)
chr7 (40-113)||(20275449-20275522)
chr7 (1-104)||(29893026-29893128)
chr7 (131-203)||(1470291-1470362)
chr7 (40-96)||(3797176-3797232)
chr7 (40-96)||(8675358-8675414)
chr7 (40-96)||(9882355-9882411)
chr7 (40-96)||(41827339-41827395)
chr7 (40-113)||(7719446-7719520)
chr7 (1-113)||(33892436-33892548)
chr7 (45-102)||(7113409-7113466)
chr7 (40-113)||(8078343-8078416)
chr7 (76-113)||(29893058-29893095)
chr7 (44-93)||(31494394-31494443)
chr7 (40-96)||(7718481-7718537)
chr7 (40-96)||(18838414-18838470)
chr7 (40-96)||(18914854-18914910)
chr7 (40-96)||(33892369-33892425)
chr7 (40-96)||(44122019-44122075)
chr7 (166-241)||(10617024-10617099)
chr7 (75-113)||(47066679-47066717)
chr7 (75-108)||(8078336-8078369)
chr7 (40-97)||(32143121-32143178)
chr7 (76-108)||(973126-973158)
chr7 (40-96)||(7719379-7719435)
chr7 (40-96)||(7993167-7993223)
chr7 (76-108)||(12893350-12893382)
chr7 (76-108)||(18914968-18915000)
chr7 (40-96)||(20275382-20275438)
chr7 (40-96)||(33382662-33382718)
chr7 (76-108)||(39219568-39219600)
chr7 (40-96)||(40996768-40996824)
chr7 (76-108)||(43581323-43581355)
chr7 (76-108)||(43679412-43679444)
chr7 (76-108)||(44343629-44343661)
[»] chr4 (144 HSPs)
chr4 (40-261)||(5441392-5441610)
chr4 (40-261)||(27768044-27768262)
chr4 (40-261)||(54853468-54853686)
chr4 (40-261)||(54341132-54341350)
chr4 (40-261)||(37828402-37828620)
chr4 (40-261)||(37915815-37916033)
chr4 (42-261)||(51320911-51321127)
chr4 (75-261)||(32322114-32322297)
chr4 (126-261)||(48261198-48261333)
chr4 (40-254)||(25331119-25331330)
chr4 (3-261)||(23987166-23987410)
chr4 (72-254)||(1112913-1113092)
chr4 (40-261)||(30967309-30967517)
chr4 (40-260)||(32950837-32951054)
chr4 (40-254)||(41881089-41881301)
chr4 (40-254)||(22202003-22202214)
chr4 (75-261)||(55302866-55303049)
chr4 (40-261)||(12112933-12113151)
chr4 (72-261)||(30009677-30009863)
chr4 (76-254)||(1044831-1045006)
chr4 (126-255)||(41725196-41725322)
chr4 (132-254)||(3436670-3436792)
chr4 (72-261)||(7007394-7007580)
chr4 (127-252)||(44770862-44770987)
chr4 (126-261)||(34228583-34228718)
chr4 (131-254)||(39479362-39479485)
chr4 (126-261)||(41320881-41321016)
chr4 (76-254)||(42786708-42786883)
chr4 (126-261)||(5800049-5800174)
chr4 (40-217)||(9163064-9163238)
chr4 (126-240)||(19740929-19741043)
chr4 (76-260)||(28483923-28484093)
chr4 (72-232)||(25446070-25446227)
chr4 (40-254)||(37046457-37046670)
chr4 (42-254)||(39307260-39307469)
chr4 (40-231)||(28541686-28541874)
chr4 (1-113)||(5441312-5441423)
chr4 (167-261)||(8711978-8712072)
chr4 (1-113)||(49835000-49835111)
chr4 (126-231)||(7249795-7249900)
chr4 (72-254)||(46635655-46635828)
chr4 (82-261)||(49501519-49501687)
chr4 (82-261)||(49507584-49507752)
chr4 (40-260)||(36479243-36479449)
chr4 (167-261)||(24736447-24736541)
chr4 (1-113)||(27767964-27768075)
chr4 (5-113)||(37828589-37828696)
chr4 (1-113)||(54341052-54341163)
chr4 (40-255)||(12913212-12913414)
chr4 (1-112)||(37915693-37915803)
chr4 (3-113)||(30967486-30967595)
chr4 (126-261)||(50018322-50018447)
chr4 (9-113)||(51320837-51320940)
chr4 (126-224)||(28370995-28371093)
chr4 (9-113)||(54853655-54853758)
chr4 (40-261)||(49834833-49835031)
chr4 (40-113)||(50018197-50018270)
chr4 (197-261)||(32684008-32684072)
chr4 (75-197)||(29649731-29649850)
chr4 (132-261)||(56445355-56445474)
chr4 (126-254)||(31314749-31314867)
chr4 (3-113)||(5799888-5799996)
chr4 (40-203)||(25504697-25504857)
chr4 (1-113)||(29649854-29649965)
chr4 (131-241)||(27454098-27454208)
chr4 (72-241)||(53275859-53276025)
chr4 (44-113)||(9163026-9163095)
chr4 (126-219)||(23465026-23465119)
chr4 (146-254)||(24130988-24131097)
chr4 (8-113)||(20021259-20021363)
chr4 (40-106)||(37915773-37915839)
chr4 (40-113)||(19741095-19741168)
chr4 (40-113)||(24131159-24131232)
chr4 (40-113)||(25331077-25331150)
chr4 (40-113)||(28541644-28541717)
chr4 (40-113)||(37046639-37046712)
chr4 (44-113)||(41320698-41320767)
chr4 (126-182)||(32684067-32684123)
chr4 (40-254)||(40537167-40537363)
chr4 (146-252)||(20021424-20021531)
chr4 (42-113)||(31314915-31314986)
chr4 (1-113)||(32321999-32322110)
chr4 (1-113)||(46635829-46635941)
chr4 (126-254)||(41581796-41581923)
chr4 (40-113)||(22201961-22202034)
chr4 (1-96)||(28483891-28483985)
chr4 (40-113)||(32951023-32951096)
chr4 (40-113)||(39479544-39479617)
chr4 (40-113)||(40537332-40537405)
chr4 (40-113)||(41725071-41725144)
chr4 (40-113)||(41881270-41881343)
chr4 (1-113)||(12913131-12913243)
chr4 (40-107)||(25504832-25504899)
chr4 (40-113)||(1044756-1044828)
chr4 (40-113)||(34228770-34228842)
chr4 (40-104)||(11090337-11090401)
chr4 (45-113)||(55302794-55302862)
chr4 (40-113)||(7249959-7250033)
chr4 (187-261)||(36727950-36728023)
chr4 (40-113)||(23464901-23464974)
chr4 (42-113)||(7007321-7007393)
chr4 (186-254)||(11090435-11090503)
chr4 (40-96)||(29649787-29649843)
chr4 (40-96)||(49501631-49501687)
chr4 (1-113)||(49501698-49501811)
chr4 (40-96)||(49507696-49507752)
chr4 (1-113)||(49507763-49507876)
chr4 (40-96)||(51320951-51321007)
chr4 (40-107)||(24131123-24131190)
chr4 (40-113)||(1112839-1112912)
chr4 (40-96)||(1044837-1044893)
chr4 (40-96)||(1112923-1112979)
chr4 (40-96)||(24131092-24131148)
chr4 (40-96)||(25446080-25446136)
chr4 (72-108)||(41320798-41320834)
chr4 (48-91)||(3328656-3328698)
chr4 (40-111)||(3436539-3436610)
chr4 (72-107)||(39479508-39479543)
chr4 (43-93)||(19741031-19741081)
chr4 (47-113)||(30009864-30009930)
chr4 (6-104)||(44646745-44646842)
chr4 (40-102)||(49469267-49469329)
chr4 (43-96)||(7007407-7007460)
chr4 (49-113)||(12112899-12112964)
chr4 (43-96)||(30009797-30009850)
chr4 (3-32)||(34141633-34141662)
chr4 (76-113)||(36479418-36479455)
chr4 (75-108)||(37046686-37046719)
chr4 (75-108)||(39479591-39479624)
chr4 (76-113)||(44771041-44771078)
chr4 (43-96)||(55302876-55302929)
chr4 (76-108)||(1044750-1044782)
chr4 (76-108)||(23464895-23464927)
chr4 (76-108)||(24131206-24131238)
chr4 (77-109)||(24736384-24736416)
chr4 (76-108)||(25331071-25331103)
chr4 (76-108)||(25504873-25504905)
chr4 (76-108)||(28541638-28541670)
chr4 (40-96)||(32322121-32322177)
chr4 (76-108)||(32951070-32951102)
chr4 (76-108)||(34228816-34228848)
chr4 (44-103)||(38230833-38230892)
chr4 (76-108)||(41881317-41881349)
chr4 (40-96)||(42786714-42786770)
[»] chr1 (108 HSPs)
chr1 (40-261)||(25612139-25612357)
chr1 (40-261)||(29396388-29396606)
chr1 (40-261)||(51701562-51701780)
chr1 (42-261)||(6312558-6312774)
chr1 (40-261)||(15835053-15835271)
chr1 (40-261)||(48177462-48177680)
chr1 (40-253)||(46328024-46328234)
chr1 (42-261)||(9322500-9322716)
chr1 (131-261)||(28387393-28387523)
chr1 (42-254)||(21222131-21222340)
chr1 (40-254)||(19451815-19452026)
chr1 (40-261)||(38536099-38536307)
chr1 (40-261)||(38558317-38558525)
chr1 (41-254)||(35279655-35279865)
chr1 (72-261)||(47780725-47780911)
chr1 (40-254)||(45760016-45760228)
chr1 (40-254)||(28824380-28824590)
chr1 (40-261)||(35679128-35679346)
chr1 (40-250)||(5495117-5495314)
chr1 (126-254)||(6304259-6304387)
chr1 (40-251)||(32588963-32589171)
chr1 (126-254)||(49418149-49418277)
chr1 (40-261)||(29219270-29219476)
chr1 (131-254)||(49198276-49198399)
chr1 (75-251)||(50192560-50192734)
chr1 (126-261)||(9577432-9577567)
chr1 (1-113)||(18798393-18798504)
chr1 (40-261)||(37014640-37014858)
chr1 (131-254)||(31572204-31572327)
chr1 (126-241)||(45536009-45536124)
chr1 (126-254)||(47654358-47654486)
chr1 (130-261)||(48668785-48668906)
chr1 (1-113)||(8141315-8141426)
chr1 (1-113)||(15835240-15835351)
chr1 (1-113)||(25612059-25612170)
chr1 (40-261)||(18798473-18798671)
chr1 (40-182)||(47784369-47784507)
chr1 (1-113)||(46327944-46328055)
chr1 (72-254)||(29556118-29556298)
chr1 (3-113)||(49230790-49230899)
chr1 (9-106)||(29219198-29219294)
chr1 (1-113)||(6312476-6312587)
chr1 (40-232)||(48524301-48524490)
chr1 (40-226)||(730130-730314)
chr1 (127-261)||(45272652-45272775)
chr1 (40-182)||(49230868-49231007)
chr1 (1-113)||(5495283-5495394)
chr1 (1-113)||(9322687-9322798)
chr1 (1-113)||(28387580-28387691)
chr1 (9-113)||(29396575-29396678)
chr1 (40-113)||(48177649-48177722)
chr1 (42-113)||(51701522-51701593)
chr1 (1-113)||(45272489-45272600)
chr1 (40-108)||(19452042-19452110)
chr1 (40-113)||(730088-730161)
chr1 (40-113)||(953759-953832)
chr1 (40-113)||(14494149-14494222)
chr1 (40-113)||(19451995-19452068)
chr1 (40-113)||(35679315-35679388)
chr1 (8-113)||(9577619-9577723)
chr1 (126-218)||(51085860-51085952)
chr1 (1-113)||(35279574-35279685)
chr1 (40-113)||(22183310-22183383)
chr1 (40-113)||(49198455-49198527)
chr1 (40-112)||(45760198-45760270)
chr1 (40-113)||(21222088-21222160)
chr1 (40-113)||(28824559-28824632)
chr1 (126-254)||(33025578-33025696)
chr1 (134-182)||(31622538-31622586)
chr1 (42-106)||(51085704-51085768)
chr1 (134-193)||(955823-955882)
chr1 (42-113)||(45535886-45535957)
chr1 (40-113)||(47654539-47654613)
chr1 (47-113)||(48524266-48524332)
chr1 (9-113)||(50192738-50192841)
chr1 (42-102)||(29556046-29556106)
chr1 (47-113)||(32589140-32589207)
chr1 (40-113)||(6304440-6304514)
chr1 (75-113)||(38536276-38536314)
chr1 (75-113)||(38558494-38558532)
chr1 (43-113)||(49418027-49418097)
chr1 (161-253)||(38320006-38320098)
chr1 (40-96)||(6312598-6312654)
chr1 (44-96)||(9191286-9191338)
chr1 (40-96)||(35279696-35279752)
chr1 (40-107)||(953801-953868)
chr1 (40-108)||(47780604-47780676)
chr1 (40-102)||(47780650-47780713)
chr1 (42-104)||(8141282-8141344)
chr1 (55-113)||(37014827-37014885)
chr1 (51-113)||(44290111-44290173)
chr1 (42-107)||(22183354-22183419)
chr1 (40-109)||(33025452-33025521)
chr1 (72-113)||(48668959-48669000)
chr1 (76-108)||(730082-730114)
chr1 (76-108)||(953753-953785)
chr1 (40-96)||(8141248-8141304)
chr1 (76-108)||(19452084-19452116)
chr1 (76-108)||(21222082-21222114)
chr1 (40-96)||(21222171-21222227)
chr1 (76-108)||(22183304-22183336)
chr1 (40-96)||(22183394-22183450)
chr1 (40-96)||(28387513-28387569)
chr1 (76-108)||(28824606-28824638)
chr1 (40-107)||(31572355-31572423)
chr1 (40-96)||(45272610-45272666)
chr1 (76-108)||(47780553-47780585)
chr1 (76-108)||(49198501-49198533)
[»] chr2 (80 HSPs)
chr2 (42-261)||(33135615-33135830)
chr2 (40-261)||(28844545-28844763)
chr2 (40-261)||(10657396-10657614)
chr2 (43-261)||(25288152-25288367)
chr2 (131-261)||(18177345-18177475)
chr2 (40-261)||(26788774-26788991)
chr2 (40-254)||(16269681-16269892)
chr2 (40-254)||(24776345-24776556)
chr2 (40-254)||(31170633-31170844)
chr2 (8-261)||(378896-379135)
chr2 (40-254)||(20605226-20605437)
chr2 (40-261)||(28740295-28740503)
chr2 (40-261)||(12407370-12407588)
chr2 (40-261)||(13833434-13833642)
chr2 (72-254)||(14198586-14198765)
chr2 (72-254)||(32125272-32125454)
chr2 (40-254)||(305474-305685)
chr2 (40-254)||(43847636-43847847)
chr2 (143-261)||(43078653-43078771)
chr2 (42-254)||(35317054-35317263)
chr2 (43-254)||(9120119-9120327)
chr2 (40-254)||(5093056-5093267)
chr2 (40-254)||(22551772-22551983)
chr2 (126-261)||(3463745-3463870)
chr2 (1-113)||(7026513-7026625)
chr2 (1-112)||(215415-215525)
chr2 (40-241)||(1789432-1789630)
chr2 (1-113)||(28844465-28844576)
chr2 (40-234)||(7026594-7026775)
chr2 (1-113)||(26788694-26788805)
chr2 (1-113)||(28740472-28740583)
chr2 (40-217)||(44765765-44765939)
chr2 (126-261)||(10125302-10125427)
chr2 (40-261)||(215240-215445)
chr2 (197-261)||(6224569-6224633)
chr2 (8-113)||(33135540-33135644)
chr2 (1-113)||(13833611-13833722)
chr2 (1-113)||(3463581-3463693)
chr2 (9-113)||(3574765-3574868)
chr2 (42-182)||(3574839-3574976)
chr2 (8-113)||(16269608-16269712)
chr2 (8-113)||(20605069-20605173)
chr2 (40-113)||(5093236-5093309)
chr2 (40-113)||(20605184-20605257)
chr2 (40-113)||(22551952-22552025)
chr2 (1-113)||(10125481-10125592)
chr2 (43-113)||(10657357-10657427)
chr2 (40-113)||(1789390-1789463)
chr2 (40-113)||(24776303-24776376)
chr2 (40-113)||(31170813-31170886)
chr2 (40-113)||(32125198-32125271)
chr2 (40-113)||(35317010-35317083)
chr2 (40-113)||(44765723-44765796)
chr2 (42-113)||(6224737-6224808)
chr2 (1-113)||(12407290-12407401)
chr2 (43-182)||(6224628-6224765)
chr2 (197-261)||(3574971-3575035)
chr2 (217-261)||(7027051-7027095)
chr2 (40-113)||(305654-305728)
chr2 (42-112)||(8172128-8172198)
chr2 (74-175)||(26601288-26601386)
chr2 (40-113)||(14198766-14198838)
chr2 (40-113)||(26601389-26601462)
chr2 (40-108)||(20605142-20605210)
chr2 (126-182)||(21370631-21370687)
chr2 (47-113)||(43847601-43847667)
chr2 (40-96)||(3574879-3574935)
chr2 (40-96)||(33135655-33135711)
chr2 (47-93)||(10859943-10859989)
chr2 (40-102)||(19144972-19145033)
chr2 (40-104)||(19145013-19145080)
chr2 (76-108)||(305702-305734)
chr2 (76-108)||(5093283-5093315)
chr2 (40-96)||(14198699-14198755)
chr2 (76-108)||(14198812-14198844)
chr2 (40-96)||(18177299-18177355)
chr2 (76-108)||(24776297-24776329)
chr2 (40-96)||(25288191-25288247)
chr2 (76-108)||(32125192-32125224)
chr2 (76-108)||(35317004-35317036)
[»] scaffold0543 (2 HSPs)
scaffold0543 (40-261)||(10549-10767)
scaffold0543 (1-113)||(10469-10580)
[»] chr5 (62 HSPs)
chr5 (40-261)||(1152102-1152320)
chr5 (40-261)||(14000104-14000322)
chr5 (42-261)||(13925922-13926138)
chr5 (40-261)||(4550256-4550474)
chr5 (126-261)||(39852417-39852552)
chr5 (40-254)||(7016745-7016956)
chr5 (75-261)||(7947572-7947755)
chr5 (40-254)||(21147056-21147267)
chr5 (40-261)||(4240461-4240669)
chr5 (40-254)||(33656047-33656260)
chr5 (40-261)||(1461147-1461355)
chr5 (40-261)||(5949098-5949305)
chr5 (40-254)||(5272925-5273136)
chr5 (40-261)||(40013711-40013919)
chr5 (76-241)||(849172-849334)
chr5 (1-113)||(37013823-37013934)
chr5 (42-254)||(139264-139473)
chr5 (40-261)||(22746286-22746496)
chr5 (1-113)||(4550443-4550554)
chr5 (72-254)||(27458956-27459134)
chr5 (40-254)||(32157900-32158115)
chr5 (1-113)||(4240638-4240749)
chr5 (1-113)||(1152289-1152400)
chr5 (1-113)||(14000291-14000402)
chr5 (1-113)||(5949018-5949129)
chr5 (8-113)||(13925847-13925951)
chr5 (46-208)||(14465279-14465438)
chr5 (9-113)||(22746214-22746317)
chr5 (40-261)||(37013903-37014101)
chr5 (40-113)||(40013888-40013961)
chr5 (131-227)||(6460869-6460965)
chr5 (40-113)||(6460739-6460812)
chr5 (86-254)||(9689693-9689857)
chr5 (48-110)||(1461327-1461389)
chr5 (43-113)||(21147017-21147087)
chr5 (8-113)||(5273147-5273252)
chr5 (40-108)||(33656234-33656302)
chr5 (40-107)||(9689607-9689674)
chr5 (40-107)||(16894052-16894119)
chr5 (43-113)||(9220893-9220963)
chr5 (40-113)||(32158084-32158158)
chr5 (8-95)||(7948521-7948607)
chr5 (76-254)||(9220723-9220888)
chr5 (47-113)||(139227-139293)
chr5 (47-113)||(27459135-27459201)
chr5 (40-113)||(5273105-5273178)
chr5 (40-113)||(14465413-14465485)
chr5 (44-96)||(6902548-6902600)
chr5 (40-96)||(13925962-13926018)
chr5 (40-91)||(16894026-16894077)
chr5 (44-93)||(9689693-9689742)
chr5 (40-96)||(849178-849234)
chr5 (76-108)||(6460733-6460765)
chr5 (76-108)||(7016930-7016962)
chr5 (40-96)||(7947692-7947748)
chr5 (40-96)||(9220826-9220882)
chr5 (76-108)||(9689601-9689633)
chr5 (40-84)||(9840931-9840975)
chr5 (44-96)||(10571266-10571318)
chr5 (76-108)||(32158132-32158164)
chr5 (76-108)||(33656276-33656308)
chr5 (40-96)||(39852376-39852432)
[»] scaffold0054 (1 HSPs)
scaffold0054 (76-261)||(36907-37089)
[»] scaffold0110 (3 HSPs)
scaffold0110 (131-261)||(39617-39747)
scaffold0110 (1-113)||(39804-39915)
scaffold0110 (48-96)||(39737-39785)
[»] scaffold0037 (2 HSPs)
scaffold0037 (40-254)||(100200-100411)
scaffold0037 (48-113)||(100166-100231)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-261)||(13833-14079)
[»] scaffold0152 (2 HSPs)
scaffold0152 (1-261)||(21248-21494)
scaffold0152 (186-261)||(28473-28549)
[»] scaffold0400 (2 HSPs)
scaffold0400 (40-254)||(15040-15251)
scaffold0400 (40-113)||(15220-15293)
[»] scaffold0365 (2 HSPs)
scaffold0365 (40-254)||(15683-15894)
scaffold0365 (40-113)||(15863-15936)
[»] scaffold1504 (2 HSPs)
scaffold1504 (126-261)||(936-1070)
scaffold1504 (1-113)||(772-883)
[»] scaffold0113 (1 HSPs)
scaffold0113 (40-250)||(38906-39113)
[»] scaffold0151 (2 HSPs)
scaffold0151 (76-254)||(38612-38786)
scaffold0151 (40-96)||(38724-38780)
[»] scaffold0004 (2 HSPs)
scaffold0004 (81-254)||(102125-102295)
scaffold0004 (40-96)||(102126-102182)
[»] scaffold0839 (1 HSPs)
scaffold0839 (161-261)||(3692-3792)
[»] scaffold0347 (2 HSPs)
scaffold0347 (186-261)||(14892-14967)
scaffold0347 (1-76)||(14804-14878)
[»] scaffold0922 (2 HSPs)
scaffold0922 (40-191)||(4189-4337)
scaffold0922 (8-110)||(4116-4217)
[»] scaffold0010 (3 HSPs)
scaffold0010 (41-113)||(233685-233757)
scaffold0010 (41-113)||(234533-234605)
scaffold0010 (41-113)||(222517-222589)
[»] scaffold0276 (3 HSPs)
scaffold0276 (131-254)||(546-669)
scaffold0276 (40-113)||(726-799)
scaffold0276 (76-108)||(773-805)
[»] scaffold0651 (1 HSPs)
scaffold0651 (42-113)||(8711-8782)
[»] scaffold0007 (2 HSPs)
scaffold0007 (126-209)||(199897-199980)
scaffold0007 (40-110)||(199771-199841)


Alignment Details
Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 43166907 - 43166689
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||   ||       |||| |||||||||    
T  43166907 tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcat---tttaaaaaagtcttgtggtattc 43166811  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  43166810 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaa 43166711  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  43166710 aagatgagatttcttgagattg 43166689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 14782352 - 14782134
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  14782352 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 14782256  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782255 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 14782156  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  14782155 aagatgagatttcttgagattg 14782134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 44726027 - 44725809
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  44726027 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 44725931  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725930 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 44725831  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  44725830 aagatgagatttcttgagattg 44725809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 10295598 - 10295379
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||| ||| |||||||||||||| ||    |||||||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  10295598 tcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 10295502  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggatttt-gtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10295501 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 10295402  T
Q  239 aaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||    
T  10295401 aaagatgagatttcttgagattg 10295379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 18958944 - 18958726
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| ||||  | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  18958944 tcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 18958848  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18958847 aaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18958748  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||| |||||| |||||||||    
T  18958747 aagattagattttttgagattg 18958726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 9288674 - 9288456
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||||| |||   | || ||||| |||||| ||||||||||||| | | ||   ||||||||       |||| |||||||||    
T  9288674 tcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaatttt---catcacttaaaaaaagtcttgtggtattc 9288578  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9288577 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 9288478  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  9288477 aagatgagatttcttgagattg 9288456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 19718098 - 19717880
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  19718098 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 19718002  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19718001 aaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaa 19717902  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  19717901 aagatgagatttcttgagattg 19717880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 39467685 - 39467467
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  39467685 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 39467589  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  39467588 aaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaa 39467489  T
Q  240 aagatgagatttcttgagattg 261  Q
    |||||||||||| |||||||||    
T  39467488 aagatgagattttttgagattg 39467467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 4403180 - 4403314
Alignment:
Q  127 tctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaa 226  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  4403180 tctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaa 4403279  T
Q  227 agtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||||||| ||||||||||||| |||||    
T  4403280 agtctttcatgaaaatatgagatttcttgggattg 4403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 26856057 - 26856274
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtctt-gtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattca 140  Q
    ||||||||||||||||||||| |||   | || ||||| ||||| | ||||||||||||||||| ||   ||||||||       |||| ||||||||||    
T  26856057 ttgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattca 26856153  T
Q  141 aaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 240  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  26856154 aaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaa 26856253  T
Q  241 agatgagatttcttgagattg 261  Q
    | || ||||||||||||||||    
T  26856254 aaataagatttcttgagattg 26856274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 24502030 - 24501819
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | ||||  | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  24502030 tcttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 24501934  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  24501933 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 24501834  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  24501833 aacatgagatttctt 24501819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 254
Target Start/End: Complemental strand, 26374645 - 26374436
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||||    
T  26374645 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaa 26374549  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  26374548 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 26374449  T
Q  242 gatgagatttctt 254  Q
     ||||||||||||    
T  26374448 catgagatttctt 26374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 18306178 - 18305970
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  18306178 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 18306082  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  18306081 aaaatcattcaaatttcgaaagattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18305992  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  18305991 aagatgagatttcttgagattg 18305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 42938334 - 42938123
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  42938334 tcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 42938238  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| |  ||||||||||||||||||    
T  42938237 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaa 42938138  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  42938137 aacatgagatttctt 42938123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 7466324 - 7466532
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   |||| |||       |||| |||||||||    
T  7466324 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcgcttaaaaaaagtcttgtggtattc 7466420  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466421 aaaatcattcaaattttgaagaattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 7466510  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  7466511 aagatgagatttcttgagattg 7466532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 32497514 - 32497722
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||| ||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  32497514 tcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 32497610  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || |||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32497611 aaaatcattcaaatttcgaatgattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaa 32497700  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  32497701 aagatgagatttcttgagattg 32497722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 42937342 - 42937551
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| |||||   | |||||||| ||||||||||||||||||  |||||||    |||||||       |||| |||||||||    
T  42937342 tcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactctta---atcacttaaaaaaagtctagtggtattc 42937436  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| ||  |||||||||||||||||    
T  42937437 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaa 42937536  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  42937537 aacatgagatttctt 42937551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 2705036 - 2704825
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  2705036 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 2704940  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || |||||||||||||||   |||| |||||||||||||||||||| |||||  |||||| || ||||||||||||||||||    
T  2704939 aaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaa 2704840  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  2704839 aacatgagatttctt 2704825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 39190061 - 39189815
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       | ||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||| || ||||||    
T  39190061 gattttaaaagactttttaattatgaatttttt-ttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctt 39189963  T
Q  108 tgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtag 207  Q
    | ||||   ||       ||||| || ||||||| |||||||||||||| |||||||||||||||||||| |||| |||||||||||  | ||||| |||    
T  39189962 tatcat---ttaaaaaaagtctcatg-tattcaacatcattcaaatttcgaaggattgtttaataaattgaattt-gatggattttgatgaattttctag 39189868  T
Q  208 tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  39189867 ta-aattttaacaagaaaaaatctttcatgaaaacatgagatttcttgggattg 39189815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 16362185 - 16362393
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||| ||||       ||||||||||||||    
T  16362185 tcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---cattacttaaaaaaagtctcgtggtattc 16362281  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||| ||||| || ||    
T  16362282 aaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaaatcttttataaa 16362371  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  16362372 aagatgagatttcttgagattg 16362393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 42735494 - 42735283
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | ||||  | |||||||| | ||||||||||||||| |||||||||    |||||||       |||| |||||||||    
T  42735494 tcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactctta---atcacttaaaaaaagtctagtggtattc 42735398  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||| ||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| |  ||||||||||||||| ||    
T  42735397 aaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaa 42735298  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  42735297 aacatgagatttctt 42735283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 7507084 - 7506905
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||| ||| |||||||||||||||||||||||||||    |||||||       |||| ||||||||||||| |||||||||||  ||||||||||||||    
T  7507084 ttaagaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaat 7506988  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||| ||| ||||||||||||    
T  7506987 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttctt 7506905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 250
Target Start/End: Complemental strand, 23115385 - 23115179
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | ||||||||||||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  23115385 tcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 23115289  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||| ||||||||||||  ||||||||||||||||||  ||||| |||||||||||||||||||| || || ||||||  || ||||||||||||||||||    
T  23115288 aaa-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaa 23115190  T
Q  240 aagatgagatt 250  Q
    || ||||||||    
T  23115189 aacatgagatt 23115179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 5576838 - 5576626
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnn-gtctcgtggtatt 138  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||        |||  ||||||||    
T  5576838 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaagtcaagtggtatt 5576742  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||| ||| |||||||||||||   ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||    
T  5576741 caaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatga 5576642  T
Q  239 aaagatgagatttctt 254  Q
    ||| ||||||||||||    
T  5576641 aaacatgagatttctt 5576626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 39467764 - 39467654
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39467764 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttacaacttaaaaaa-gtcttgtggtattcaatcaa 39467667  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  39467666 gactctttgtcat 39467654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 10392371 - 10392246
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||    
T  10392371 gtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10392272  T
Q  226 aagtctttcatgaaaagatgagattt 251  Q
    || ||||||||||||| |||||||||    
T  10392271 aaatctttcatgaaaacatgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 37857191 - 37857316
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||          ||||||||||||||| |||||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggat----------tttgtagtgtaatttgaacaagaaa 37857280  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    || |||||||||||||||||||||||||||||||||    
T  37857281 aaatctttcatgaaaagatgagatttcttgagattg 37857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 42306002 - 42305794
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||        ||| |||||||||    
T  42306002 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaaatcttgtggtattc 42305906  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||  |||||||||||          ||||||||||||||||||||||||| ||||||||    
T  42305905 aaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaaagtcattcatgaa 42305816  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||||||||||    
T  42305815 aaaatgagatttcttgagattg 42305794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7466244 - 7466355
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  7466244 tctatgagattttaaaagattttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 7466342  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  7466343 gactctttgtcat 7466355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 14782432 - 14782321
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  14782432 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 14782334  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  14782333 gactctttgtcat 14782321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44726107 - 44725996
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  44726107 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 44726009  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  44726008 gactctttgtcat 44725996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18959024 - 18958913
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  18959024 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtagtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 18958926  T
Q  101 gactctttgtcat 113  Q
    |||||||| ||||    
T  18958925 gactctttatcat 18958913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32497392 - 32497499
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| ||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32497392 tctatgggattttaaaagactttttaatcatgaaaaag-tcttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaa 32497490  T
Q  101 gactctttg 109  Q
    |||| ||||    
T  32497491 gactttttg 32497499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 18306220 - 18306147
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  18306220 tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcat 18306147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 261
Target Start/End: Original strand, 31623689 - 31623882
Alignment:
Q  45 tggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaat 144  Q
    |||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| ||||||||||||||    
T  31623689 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattcaaaat 31623785  T
Q  145 cattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 244  Q
    |||||||||||| |||||||||||||||||||||||                    ||||||||||||||||||||||||||||| ||||||||||||||    
T  31623786 cattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaagtttttcatgaaaagat 31623865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4031555 - 4031444
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  4031555 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcgatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 4031457  T
Q  101 gactctttgtcat 113  Q
    || ||||||||||    
T  4031456 gaatctttgtcat 4031444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42306082 - 42305971
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||| ||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  42306082 tctatgtgattttaaaagactttttaattatgaaaaag-tcttgtgatattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaa 42305984  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  42305983 gactctttgtcat 42305971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16362105 - 16362216
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       | |||||||||||||||||||||||||  |||||||||||  ||||||| |||||||||||    
T  16362105 tctatgggattttaaaagactttttaattatgaaaaagtt-ttgtggtattcaatcaagactttttgtaacttaaaaaaaatcttgtgatattcaatcaa 16362203  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  16362204 gactctttgtcat 16362216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19718178 - 19718067
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| ||||||||||||| |||||||||||       || || ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  19718178 tctatgggattttaaaagaccttttaattatgaaaaag-tcctgcggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 19718080  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  19718079 gactctttgtcat 19718067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 4950143 - 4950022
Alignment:
Q  133 ggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 232  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||| ||||| |||||| ||||||| ||||| ||||| ||||||| || |||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  233 tcatgaaaagatgagatttctt 254  Q
    ||||| ||| || |||||||||    
T  4950043 tcatgcaaacataagatttctt 4950022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 32497472 - 32497545
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  32497472 tcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcat 32497545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 4403018 - 4403119
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    ||||||||||||||||||||||||||| ||       |||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  4403018 tatgagattttaaaagactttttaattgtgaaaaag-tcttttggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 4403116  T
Q  103 ctc 105  Q
    |||    
T  4403117 ctc 4403119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26855977 - 26856086
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||||||||||||||||||||  |||||||       | ||||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  26855977 tctatgagattttaaaagacttt--aattatgaaaaagtt-ttgtggtattcaatcaagactttttgcaacttaaaaaaaatattgtggtattcaatcaa 26856073  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  26856074 gactctttgtcat 26856086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 41479088 - 41479287
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       ||||  ||||||||||    
T  41479088 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctaatggtattcaa 41479184  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| || |||||||||||||||  ||||          |||||||||||| ||||  ||||||| || |||||| |||||||||||||    
T  41479185 aatcattcaaatttcgaatgattgtttaataaatcagatt----------ttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaa 41479274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10295678 - 10295568
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||| ||||||||||||       ||||||||||||||||||||||||||| |||||||| ||| ||||| ||| ||||||||||    
T  10295678 tctatgggattttaaaagagtttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaagaaaagtcttctggcattcaatcaa 10295580  T
Q  101 gactctttgtca 112  Q
    ||||||| ||||    
T  10295579 gactcttcgtca 10295568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 32711499 - 32711367
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  32711499 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 32711403  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    ||||||||| ||||||| ||||||||||||||||||    
T  32711402 aaaatcatttaaatttcgaaggattgtttaataaat 32711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 4031475 - 4031336
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||| | |||   | || ||||| |||||| ||||||||||||||||| ||   ||| | ||       |||| |||||||||    
T  4031475 tcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---cataaattaaaaaaagtcttgtggtattc 4031379  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  4031378 aaaatcattcaaatttcgaaggattgtttaataaattggattt 4031336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  134 gtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 233  Q
    |||||||||||| || ||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||| |||   ||||||| || || |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  234 catgaaaa 241  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 31623612 - 31623715
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||| ||||||||||||       |||||||| ||||||||||||||||||  ||||||||||| ||||  ||||||||||||||||||||||    
T  31623612 attttaaaagattttttaattatgaaaaag-tcttgtggcattcaatcaagactttttgtaacttaaaaaaagtctcttggtattcaatcaagactcttt 31623710  T
Q  109 gtcat 113  Q
    |||||    
T  31623711 gtcat 31623715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 2705078 - 2705005
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  2705078 tcttgtggtattcaatcaagactctttccaaattaaaaaaagtcttgtgttattcaatcaagattctttgtcat 2705005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 5576880 - 5576807
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  5576880 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 5576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 23115427 - 23115354
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  23115427 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 23115354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 43959605 - 43959678
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  43959605 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 43959678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 4031341 - 4031294
Alignment:
Q  197 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 8410526 - 8410455
Alignment:
Q  132 tggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggatttt 203  Q
    ||||||||||||||||| ||||||  |||||||||||| ||||||||| || ||||||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 32711539 - 32711468
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  32711539 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 32711468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 43959734 - 43959800
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgg 197  Q
    |||||||||||||||||||||||||| || |||||||||||||||  ||||| ||||||||||||||    
T  43959734 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgg 43959800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 41479044 - 41479117
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||||| ||||||||||    
T  41479044 tcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcat 41479117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 42735536 - 42735463
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||| ||||    
T  42735536 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttatcat 42735463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 42938376 - 42938303
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| | ||||||||    
T  42938376 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcat 42938303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9288747 - 9288643
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       |||||||||       ||||||||||| ||| |||||||| |||||||| |||||||||||    
T  9288747 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggt-------caagactttttgcaatttaaaaaaagtcttgtgatattcaatcaa 9288656  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  9288655 gactctttgtcat 9288643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 41069896 - 41069955
Alignment:
Q  45 tggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    ||||||||||| |||| | |||||||||||||||||||||| || |||||||||||||||    
T  41069896 tggtattcaataaagattctttacaacttaaaaaatgtcttatgatattcaatcaagact 41069955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 31623726 - 31623782
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  31623726 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 31623782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 9770545 - 9770498
Alignment:
Q  135 tattcaaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggattt 9770498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 26374687 - 26374616
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||||| ||| ||| |||||||| |  ||||| ||||||||||||| ||||||||||    
T  26374687 tcttgtgatattcaatcaagactctttccaatttaaaaaaag--ttgtgttattcaatcaagattctttgtcat 26374616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 7507074 - 7507018
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  7507074 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7507018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 26374605 - 26374549
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  26374605 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 26374549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 7507158 - 7507085
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| ||||||||    ||||| ||||||||| ||| || |||||||    
T  7507158 tcttgtggtattcaatcaagactctttccaatttaaaaaaaagtttgtgttattcaatcgagattccttgtcat 7507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 9770985 - 9770936
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||||||||||||||||||||  |||||||||| |||| || ||||||||    
T  9770985 gtattcaatcaagactttttatcacttaaaaaaagtctcgtagtattcaa 9770936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 24214857 - 24214824
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||| ||||||||||||||||||||||||||||    
T  24214857 aaaaaagtcttgtggtattcaatcaagactcttt 24214824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 2705084 - 2705052
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  2705084 aaaaagtcttgtggtattcaatcaagactcttt 2705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 7507164 - 7507132
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  7507164 aaaaagtcttgtggtattcaatcaagactcttt 7507132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 9771067 - 9771003
Alignment:
Q  49 attcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||| ||| ||| |||||||||||| || ||||  ||||||||||||| ||||| ||||    
T  9771067 attcaatcaatactctttgcaacttaaaaaaagttttgttttattcaatcaagaatctttctcat 9771003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 23115433 - 23115401
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  23115433 aaaaagtcttgtggtattcaatcaagactcttt 23115401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 26373746 - 26373778
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  26373746 aaaaagtcttgtggtattcaatcaagactcttt 26373778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 41479038 - 41479070
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  41479038 aaaaagtcttgtggtattcaatcaagactcttt 41479070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 41479128 - 41479184
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| ||||  ||||||||||    
T  41479128 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaa 41479184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 42735542 - 42735510
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  42735542 aaaaagtcttgtggtattcaatcaagactcttt 42735510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 42938382 - 42938350
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  42938382 aaaaagtcttgtggtattcaatcaagactcttt 42938350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 43959599 - 43959631
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  43959599 aaaaagtcttgtggtattcaatcaagactcttt 43959631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 7497026 - 7497280
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||| ||||||||||||       | || ||||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  7497026 tctatgagattttaaaagattttttaattatgaaaaag-tattctggtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaa 7497124  T
Q  101 gactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggat 200  Q
    ||   ||| |||||||||       |||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||    
T  7497125 ga---tttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgtgg-at 7497220  T
Q  201 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7497221 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 7497280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 260
Target Start/End: Complemental strand, 34759268 - 34759050
Alignment:
Q  40 tcttgtggtattcaatcaagacttttta-caacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    ||||||||||||||||||||||| |||  ||  |||||||| ||||||  |||||||||||||||| ||   ||||||||       |||| ||||||||    
T  34759268 tcttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtatt 34759172  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34759171 caaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatga 34759072  T
Q  239 aaagatgagatttcttgagatt 260  Q
    ||||||||||||||||||||||    
T  34759071 aaagatgagatttcttgagatt 34759050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 31895684 - 31895902
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| ||||||  |||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  31895684 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 31895780  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31895781 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaa 31895880  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  31895881 aagatgagatttcttgagattg 31895902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 14262650 - 14262432
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | ||  |||| |||||| |||||||||||||||   ||| |||||| ||       |||| |||||||||    
T  14262650 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaaga---tttttcatcatttaaaaaaagtcttgtggtattc 14262554  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14262553 aaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 14262454  T
Q  240 aagatgagatttcttgagattg 261  Q
    |||||| |||||||||||||||    
T  14262453 aagatgggatttcttgagattg 14262432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 34773397 - 34773608
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||        ||| |||||||||    
T  34773397 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaaatcttgtggtattc 34773493  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34773494 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaa 34773593  T
Q  240 aagatgagatttctt 254  Q
    |||||||||||||||    
T  34773594 aagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 6197695 - 6197484
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  6197695 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 6197599  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  6197598 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 6197499  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  6197498 aacatgagatttctt 6197484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 2300955 - 2300744
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       ||||  |||||||     
T  2300955 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttg---atcacttaaaaaaagtctactggtattg 2300859  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  2300858 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 2300759  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  2300758 aacatgagatttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 31067569 - 31067689
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  231 tttcatgaaaagatgagatttcttgagattg 261  Q
    |||||| ||||||||||||||||||||||||    
T  31067659 tttcataaaaagatgagatttcttgagattg 31067689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 1391644 - 1391819
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    ||||| || |||||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||  ||||||||||||||    
T  1391644 ttaaataaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaat 1391740  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 250  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||||||||    
T  1391741 aaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 1391819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 30385274 - 30385068
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| || ||| ||||||||||||| | | ||   ||||||||       |||| |||||||||    
T  30385274 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaatttt---catcacttaaaaaaagtcttgtggtattc 30385178  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||  ||||||||||||    
T  30385177 aaaatcattcaaatttcgaaggattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaacaaa--gtctttcatgaa 30385090  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  30385089 aagatgagatttcttgagattg 30385068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 7051865 - 7052044
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||| ||||||||||||||   ||||||||       |||  ||| |||||||||||||||||||||| ||||||||||||||    
T  7051865 ttaaaaaaagtcttgtggtatacaatcaagactctt---catcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaaggattgtttaat 7051961  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||||||||| |||||||||||| ||||||| ||||  ||||||| || |||||||| |||||| |||  ||||||||||||    
T  7051962 aaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttctt 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 28002661 - 28002856
Alignment:
Q  48 tattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcat 147  Q
    ||||||||||||| |||||   | |||||||| ||||| |||||||||||||||||||||    |||||||       |||| ||| |||||||||||||    
T  28002661 tattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactctta---atcacttaaaaaaagtctagtgatattcaaaatcat 28002757  T
Q  148 tcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 246  Q
    ||||||||  ||||||||||||||||||  ||||| |||||||||||||  ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  28002758 tcaaatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 4200541 - 4200436
Alignment:
Q  146 attcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 245  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  246 agatttcttgagattg 261  Q
    ||||||||||||||||    
T  4200451 agatttcttgagattg 4200436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31895604 - 31895715
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  31895604 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 31895702  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  31895703 gactctttgtcat 31895715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 34773319 - 34773428
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  34773319 tatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 34773417  T
Q  103 ctctttgtcat 113  Q
    |||||||||||    
T  34773418 ctctttgtcat 34773428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 14262723 - 14262619
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  14262723 gattttaaaagactttttaattatgaaaaaa-tcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 14262625  T
Q  108 tgtcat 113  Q
    ||||||    
T  14262624 tgtcat 14262619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 29076678 - 29076795
Alignment:
Q  134 gtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||| | ||||||| ||||| ||||||| || |||||| |||||    
T  29076678 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatcttt 29076777  T
Q  234 catgaaaagatgagattt 251  Q
    ||| |||| |||||||||    
T  29076778 cataaaaacatgagattt 29076795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 29111652 - 29111769
Alignment:
Q  134 gtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||| | ||||||| ||||| ||||||| || |||||| |||||    
T  29111652 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatcttt 29111751  T
Q  234 catgaaaagatgagattt 251  Q
    ||| |||| |||||||||    
T  29111752 cataaaaacatgagattt 29111769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 2300997 - 2300924
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  2300997 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 2300924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 34759293 - 34759237
Alignment:
Q  57 aagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34759293 aagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcat 34759237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 6197734 - 6197664
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  6197734 tgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 6197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7051753 - 7051864
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| |||||||||||||||||||| || |||       ||||||| ||||||||||||||| ||| |||||||||||| |||||||||||| | |||||    
T  7051753 tctaagagattttaaaagacttttttatcatgaaaaag-tcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtatacgatcaa 7051851  T
Q  101 gactctttgtcat 113  Q
    || ||||||||||    
T  7051852 gattctttgtcat 7051864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 1391570 - 1391643
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| || |||||||    
T  1391570 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcattgtcat 1391643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 30385299 - 30385243
Alignment:
Q  57 aagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  30385299 aagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcat 30385243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 3848114 - 3848183
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||| | | ||||||||    
T  3848114 gtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaatcaatattttttgtcat 3848183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 29076544 - 29076617
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||||| ||| ||| ||||| || |||||||| ||||||||||||| ||||||||||    
T  29076544 tcttgtgatattcaatcaagactctttccaatttaaataaagtcttgtgttattcaatcaagattctttgtcat 29076617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 29111517 - 29111590
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||||| ||| ||| ||||| || |||||||| ||||||||||||| ||||||||||    
T  29111517 tcttgtgatattcaatcaagactctttccaatttaaataaagtcttgtgttattcaatcaagattctttgtcat 29111590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 3848200 - 3848337
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||| |||||||   | |||||| | || |||||||| ||||||||||||     |||||||||       || | |||||||||    
T  3848200 tcttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagact-----tcatcacttaaaaaaagttttgtggtattc 3848294  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    ||||||||| ||||||  || ||||||||||||||||| ||||    
T  3848295 aaaatcatttaaattttgaatgattgtttaataaattgaattt 3848337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 28002611 - 28002684
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||| |||||||||||||||| ||| ||| |||||||| |||||||  ||||||||||||| | ||||||||    
T  28002611 tcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttgtcat 28002684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 656957 - 657065
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaa 142  Q
    |||| ||||||||||||| | ||| ||  |||||||| ||||||||||||||||||||||||||   | |||||||       |||| ||||||||| ||    
T  656957 tgtgttattcaatcaagattctttgcat-ttaaaaaaagtcttgtggtattcaatcaagactct---taatcacttaaaaaaagtctagtggtattctaa 657052  T
Q  143 atcattcaaattt 155  Q
    |||||||||||||    
T  657053 atcattcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 1391654 - 1391710
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  1391654 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1391710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 656995 - 657049
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattc 94  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||    
T  656995 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 657049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 1391564 - 1391596
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  1391564 aaaaagtcttgtggtattcaatcaagactcttt 1391596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 2301003 - 2300971
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  2301003 aaaaagtcttgtggtattcaatcaagactcttt 2300971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 138)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 261
Target Start/End: Original strand, 17946248 - 17946494
Alignment:
Q  11 tttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgt 110  Q
    ||||||||||||||||||||||       ||||||||||||||||||||| | |||   | || ||||| |||||| ||||||||||||||||| ||       
T  17946248 tttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt--- 17946343  T
Q  111 catcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgt 210  Q
    ||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17946344 catcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgt 17946443  T
Q  211 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17946444 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 17946494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 18749600 - 18749818
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||| ||||||||||||| |||||| |  |||| ||||| |||||| |||||||||| || ||| ||   ||||||||       |||| |||||||||    
T  18749600 tcttgaggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaactttt---catcacttaaaaaaagtcttgtggtattc 18749696  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749697 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18749796  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  18749797 aagatgagatttcttgagattg 18749818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 36674348 - 36674130
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  36674348 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 36674252  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674251 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 36674152  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  36674151 aagatgagatttcttgagattg 36674130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 44906731 - 44906513
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  44906731 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 44906635  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44906634 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaa 44906535  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  44906534 aagatgagatttcttgagattg 44906513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 34484248 - 34484030
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       || | |||||||||    
T  34484248 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagttttgtggtattc 34484152  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34484151 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaa 34484052  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  34484051 aagatgagatttcttgagattg 34484030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 51737945 - 51737726
Alignment:
Q  40 tcttgtggtattcaatcaagacttttta-caacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    ||||||||||||||||||||||| |||| ||  |||||||| |||||| ||||||||||||||||| ||   ||||||||       |||| ||||||||    
T  51737945 tcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtatt 51737849  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  51737848 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataa 51737749  T
Q  239 aaagatgagatttcttgagattg 261  Q
    |||||| ||  ||||||||||||    
T  51737748 aaagataagtattcttgagattg 51737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 11431514 - 11431732
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||||||| |||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  11431514 tcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 11431610  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431611 aaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 11431710  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  11431711 aagatgagatttcttgagattg 11431732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 40897132 - 40897350
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||||| |||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       ||||  ||||||||    
T  40897132 tcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttatggtattc 40897228  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40897229 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaa 40897328  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||| ||||    
T  40897329 aagatgagatttcttgatattg 40897350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 54628920 - 54629050
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  231 tttcatgaaaagatgagatttcttgagattg 261  Q
    |||||| ||||||||||||||||||||||||    
T  54629020 tttcataaaaagatgagatttcttgagattg 54629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 32580247 - 32580382
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||||||||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttcttgagattg 32580382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 26107332 - 26107467
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26107332 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaa 26107431  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||| |||||| ||||||||||||||||||||||||    
T  26107432 aagtatttcataaaaagatgagatttcttgagattg 26107467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 52810328 - 52810584
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||| ||||       | ||||||||||||||||||||| |||   | || ||||| || ||| |||||||||||||    
T  52810328 tctatgggattttaaaagactttttaactatgaaaaag-tgttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaa 52810426  T
Q  101 gactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggat 200  Q
    |||| ||   ||||| ||       |||| |||||||||||||||||||||||||  || ||||||||||||||||| |||| |||||||||||||||||    
T  52810427 gactttt---catcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggat 52810523  T
Q  201 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52810524 tttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattg 52810584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 50 - 261
Target Start/End: Original strand, 48379155 - 48379363
Alignment:
Q  50 ttcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattc 149  Q
    ||||||||||||| |||   | || ||||| |||||| ||||||||||| ||||| ||   ||||||||       |||| |||||||||||||||||||    
T  48379155 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagactttt---catcacttaaaaaaagtcttgtggtattcaaaatcattc 48379251  T
Q  150 aaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 249  Q
    ||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  48379252 aaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagat 48379351  T
Q  250 ttcttgagattg 261  Q
    ||||||||||||    
T  48379352 ttcttgagattg 48379363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 50903461 - 50903240
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||  ||||||||||||||||| ||| ||||            |||| |||||||||    
T  50903461 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattc 50903362  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  50903361 aaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaa 50903262  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||||||||||    
T  50903261 aatatgagatttcttgagattg 50903240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 43 - 261
Target Start/End: Complemental strand, 52618180 - 52617971
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaa 142  Q
    |||| ||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| ||||||||||||    
T  52618180 tgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattcaaa 52618084  T
Q  143 atcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 242  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||      ||||||||||| |||||    
T  52618083 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcataaaaag 52617990  T
Q  243 atgagatttcttgagattg 261  Q
    |||||||||||||||||||    
T  52617989 atgagatttcttgagattg 52617971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 10139364 - 10139153
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| |  |||  | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  10139364 tcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 10139268  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  10139267 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 10139168  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  10139167 aacatgagatttctt 10139153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 19253815 - 19254026
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  19253815 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 19253911  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  19253912 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 19254011  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  19254012 aacatgagatttctt 19254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 31646414 - 31646286
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  231 tttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||  |||||||||||||||||||    
T  31646314 tttcatgaaa--atgagatttcttgagattg 31646286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 20498199 - 20498408
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||||    
T  20498199 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaa 20498295  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  20498296 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 20498395  T
Q  242 gatgagatttctt 254  Q
     ||||||||||||    
T  20498396 catgagatttctt 20498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 9 - 261
Target Start/End: Complemental strand, 10728889 - 10728651
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||     
T  10728889 attttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt- 10728792  T
Q  109 gtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagt 208  Q
      ||||||||       |||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||          |||    
T  10728791 --catcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatggattttgt----------agt 10728704  T
Q  209 gtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728703 gtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 10728651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 996304 - 996093
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | ||||  | || ||||| |||||||||||||||||||||| ||||    |||||||       |||| |||||||||    
T  996304 tcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattctta---atcacttaaaaaaagtctagtggtattc 996208  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  996207 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 996108  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  996107 aacatgagatttctt 996093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 254
Target Start/End: Complemental strand, 3206387 - 3206212
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  3206387 aaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 3206291  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
      ||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  3206290 cagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt 3206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 33807985 - 33807805
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnn-gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaa 170  Q
    |||||||| |||||||||||||||||||||||||||    |||||||        |||| |||||||||||||||||||||||||| |||||||||||||    
T  33807985 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 33807889  T
Q  171 taaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    |||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  33807888 taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 33807805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 3999863 - 3999652
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||        ||| |||||||||    
T  3999863 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaatctagtggtattc 3999767  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| |||||||  | ||||||||||||||| ||    
T  3999766 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaa 3999667  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  3999666 aacatgagatttctt 3999652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 37820695 - 37820477
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | ||||||||  ||||||||||||||||||||| ||||    |||||||       |||| |||||||||    
T  37820695 tcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattctta---atcacttaaaaaaagtctagtggtattc 37820599  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||  |||| ||||||| || ||||||||||||||| ||    
T  37820598 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaa 37820499  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||| ||||||    
T  37820498 aacatgagatttcttaagattg 37820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 6589584 - 6589763
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||  ||||   ||       |||| |||||||||||||||||||||||||| ||| ||| ||||||    
T  6589584 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcat---ttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaat 6589680  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6589681 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 6589763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 250
Target Start/End: Original strand, 20832984 - 20833187
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaa 143  Q
    |||||||| |||||||||| |||   | || ||||| |||||| ||||||||||||||| | ||   ||||||||       |||| |||||||||||||    
T  20832984 gtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaatttt---catcacttaaaaaaagtcttgtggtattcaaaa 20833080  T
Q  144 tcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 243  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||    
T  20833081 tcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaaga 20833180  T
Q  244 tgagatt 250  Q
    | |||||    
T  20833181 taagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 261
Target Start/End: Original strand, 54625612 - 54625798
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    ||||||||  |||||| |||||||||||||||||||    |||||||       |||| |||||||||||||| ||||||||||| ||||||||||||||    
T  54625612 ttaaaaaaaatcttgttgtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaat 54625708  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||||| ||||||    
T  54625709 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 45 - 261
Target Start/End: Complemental strand, 6035266 - 6035053
Alignment:
Q  45 tggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaat 144  Q
    |||||||||||||||| | |||   | || ||||| |||||| |||||||||||||||   ||| |||||||||       |||||||| ||||||||||    
T  6035266 tggtattcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaaga---tttttcatcacttaaaaaaagtctcgtgatattcaaaat 6035170  T
Q  145 cattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 244  Q
    |||||||||||| ||| | ||||||||||||| ||||| |||||||||||||||||||| ||||  ||||||| || ||||||||||||||| |||| ||    
T  6035169 cattcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacat 6035070  T
Q  245 gagatttcttgagattg 261  Q
    |||||||||| ||||||    
T  6035069 gagatttcttaagattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 39038030 - 39038236
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| ||||||| |||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcactttaaaaaagtcttgtggtatccaa 39038126  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||| ||||    
T  39038127 aatcattcaaatttcgaagaattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcataaaaa 39038216  T
Q  242 gatgagatttcttgagattg 261  Q
    ||||||||||||||| ||||    
T  39038217 gatgagatttcttgaaattg 39038236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 44762255 - 44762037
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||| ||| |||||||||||||||||||    |||||||       |||| ||||||||     
T  44762255 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattt 44762159  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||| |||||| |||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||| |||||    
T  44762158 aaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaa 44762059  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||| ||||||    
T  44762058 aacatgagatttcttaagattg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 37454851 - 37455057
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||| | |||   | || ||||| |||||| | ||||||||||||||| ||   ||||| ||       |||| |||||||||||    
T  37454851 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattcaa 37454947  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| || ||||||||||||||||| ||||          ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37454948 aatcattcaaatttcgaatgattgtttaataaattgaattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 37455037  T
Q  242 gatgagatttcttgagattg 261  Q
    ||||||||||||||||||||    
T  37455038 gatgagatttcttgagattg 37455057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 29448993 - 29448865
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||  ||||||| ||  |||    
T  29448993 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaa 29448894  T
Q  226 aagtctttcatgaaaagatgagatttctt 254  Q
    |||||||||||||||| ||||||||||||    
T  29448893 aagtctttcatgaaaacatgagatttctt 29448865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 47 - 254
Target Start/End: Complemental strand, 33996752 - 33996548
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatca 146  Q
    |||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||        ||  ||||||||||||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaatccagtggtattcaaaatca 33996656  T
Q  147 ttcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 246  Q
    |||||||||| ||||||||||||||||||  ||||| ||||||||||| |||||||| ||||| ||||||| || |||||||||||| || |||| ||||    
T  33996655 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatga 33996556  T
Q  247 gatttctt 254  Q
    ||||||||    
T  33996555 gatttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 250
Target Start/End: Original strand, 25418354 - 25418561
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||| ||    |||||||        ||| | |||||||    
T  25418354 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactttta---atcacttacaaaaaatctagcggtattc 25418450  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||  || |||||||| |||||||||    
T  25418451 aaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaa 25418550  T
Q  240 aagatgagatt 250  Q
    || ||||||||    
T  25418551 aacatgagatt 25418561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 250
Target Start/End: Original strand, 40246832 - 40247039
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| || ||||||||||||||||||||| ||    |||| ||       |||| |||||||||    
T  40246832 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactatta---atcagttaaaaaaagtctagtggtattc 40246928  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||  || ||||||||||||||||||    
T  40246929 aaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaa 40247028  T
Q  240 aagatgagatt 250  Q
    || ||||||||    
T  40247029 aacatgagatt 40247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 5825139 - 5825261
Alignment:
Q  132 tggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 231  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||| || || ||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  232 ttcatgaaaagatgagatttctt 254  Q
    |||||||||| ||||||||||||    
T  5825239 ttcatgaaaacatgagatttctt 5825261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 27240541 - 27240430
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  27240541 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 27240443  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  27240442 gactctttgtcat 27240430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44906811 - 44906700
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  44906811 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 44906713  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  44906712 gactctttgtcat 44906700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 54628751 - 54628862
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  54628751 tctatgagattttaaaagactttttaattatgaaaacg-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 54628849  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  54628850 gactctttgtcat 54628862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 251
Target Start/End: Original strand, 35337758 - 35337930
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaa 174  Q
    ||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||||||  ||||||||||| |||||||||||||||||    
T  35337758 aaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaa 35337854  T
Q  175 ttggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 251  Q
    |  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||    
T  35337855 tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 50762185 - 50762060
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| ||||||||||||||||||| |||||| || |||||||| ||||||||||||| ||||||||||||          ||||||||||||||||||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 50762096  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||||||||||||||||    
T  50762095 aagtctttcatgaaaagatgagatttcttgagattg 50762060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 53929314 - 53929138
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||| |||| || || |||||||||||    
T  53929314 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaat 53929218  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 251  Q
    ||||  ||||| |||||||||||| ||||||| ||||| ||||||| || |||||| ||||| ||||||| |||||||||    
T  53929217 aaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattt 53929138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10660443 - 10660554
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  10660443 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 10660541  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  10660542 gactctttgtcat 10660554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 18749486 - 18749589
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  18749486 attttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactcttt 18749584  T
Q  109 gtcat 113  Q
    |||||    
T  18749585 gtcat 18749589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 36674428 - 36674317
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  36674428 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 36674330  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  36674329 gactctttgtcat 36674317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 39842727 - 39842494
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       | ||||||||||||||||||||||||| ||||||||||||              |||||||    
T  39842727 tctatgggattttaaaagactttttaattatgaaaaagtt-ttgtggtattcaatcaagactttttgcaacttaaaaaaa-------------caatcaa 39842642  T
Q  101 gactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggat 200  Q
    ||   ||| |||||||||       |||||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||| || |||||||||         
T  39842641 ga---tttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt----- 39842550  T
Q  201 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
         | |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39842549 -----aatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattg 39842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 50762346 - 50762237
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       | ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  50762346 tatgggattttaaaagactttttaattatgaaaaag-tattgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 50762248  T
Q  103 ctctttgtcat 113  Q
    |||||||||||    
T  50762247 ctctttgtcat 50762237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 27899301 - 27899533
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||| ||||||       | ||||||||||||||  ||| | ||| |||||||||||| ||| | |||||||||||||||||||||    
T  27899301 gattttaaaagacttttttattatgaaattttt-ttgtggtattcaattcagattctttccaacttaaaaaaagtcatatggtattcaatcaagactctt 27899399  T
Q  108 tgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtag 207  Q
    ||||||   ||       |||| |||||||||||||||||||||||||| ||||||||||||||||||            |||||||| ||||||| |||    
T  27899400 tgtcat---ttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------cagattttgtaggattttctag 27899486  T
Q  208 tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    || ||||||| || |||||||||||||||||||| |||| |||||||    
T  27899487 tgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctt 27899533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31646582 - 31646474
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  31646582 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttatggtattcaatcaa 31646484  T
Q  101 gactctttgt 110  Q
    ||||||||||    
T  31646483 gactctttgt 31646474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40897051 - 40897163
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||| ||||||||||||||       ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  40897051 tctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcattcaa 40897150  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  40897151 gactctttgtcat 40897163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11431434 - 11431545
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||    
T  11431434 tctataagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaa 11431532  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  11431533 gactctttgtcat 11431545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 50903541 - 50903430
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||| ||||||||| ||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  50903541 tctatgggattttaaaatactttttaagtatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 50903443  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  50903442 gactctttgtcat 50903430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 253
Target Start/End: Original strand, 29029994 - 29030203
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| |||||||| |||||| |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  29029994 tcttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaa-gtcttgtggtattc 29030089  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||  ||||| |||||||||||||| ||||| || || |||||||||| |||    | ||| |||||    
T  29030090 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaa 29030189  T
Q  240 aagatgagatttct 253  Q
    || |||||||||||    
T  29030190 aacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 10660523 - 10660675
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       || | |||||||||    
T  10660523 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtattgtggtattc 10660619  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgt 195  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10660620 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 45862983 - 45863047
Alignment:
Q  197 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 45863047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 23753677 - 23753573
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||    
T  23753677 gattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagattctt 23753579  T
Q  108 tgtcat 113  Q
    ||||||    
T  23753578 tgtcat 23753573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 51699610 - 51699495
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||| |||||||| |||||||||  ||||| |||| ||||||||||||||| ||||| ||||||| || |||||| ||    
T  51699610 gtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatc 51699511  T
Q  231 tttcatgaaaagatga 246  Q
    |||| |||||| ||||    
T  51699510 tttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 23753604 - 23753407
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||| | |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  23753604 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 23753508  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||| |    
T  23753507 aaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaaaaagtctttcatg-a 23753429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 22057838 - 22057933
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaa 226  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||  ||||| |||||||||||||||||||| ||||| |||||||||| |||||    
T  22057838 gtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 51738023 - 51737914
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||  |||||||||  |||||||||||| ||||||||||||||||||||    
T  51738023 tctatgagattttaaaagactttttaattatgaaaaaa-tcttgtggtattcaa--aagacttttagcaacttaaaaaaagtcttgtggtattcaatcaa 51737927  T
Q  101 gactctttgtcat 113  Q
    |||||||| ||||    
T  51737926 gactctttatcat 51737914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 1440136 - 1440010
Alignment:
Q  74 aaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataa 173  Q
    |||||| || ||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  1440136 aaaaaaagttttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataa 1440040  T
Q  174 attggatttcgatggattttgtgggatttt 203  Q
    ||  ||||| |||||||||| |||||||||    
T  1440039 atcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 260
Target Start/End: Original strand, 44276377 - 44276580
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||||||| || ||| |||   | || ||||| |||||| |||||||||||||||   ||| |||||||||       ||||| ||||||||    
T  44276377 tcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaga---tttttcatcacttaaaaaaagtctcatggtattc 44276473  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||    |||||||||||||||||||||          |||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  44276474 aaaatcattcaaatt----aggattgtttaataaattgga----------ttttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaa 44276559  T
Q  240 aagatgagatttcttgagatt 260  Q
     | ||||||||| ||| ||||    
T  44276560 gacatgagattttttgggatt 44276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 52114600 - 52114728
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||| |||||||||||  |||||||||||||||||  ||||| ||| |||||||||| ||||| ||||  ||||||| || ||||    
T  52114600 gtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaa 52114699  T
Q  226 aagtctttcatgaaaagatgagatttctt 254  Q
    || |||||  |||||| ||||||||||||    
T  52114700 aaatcttttgtgaaaacatgagatttctt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 52618263 - 52618152
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||| ||||||| |||||  ||||||||||| ||| |||| |||||||||||    
T  52618263 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcgatcaagattttttgtaacttaaaaaaagtcatgtgatattcaatcaa 52618165  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  52618164 gactctttgtcat 52618152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 6131316 - 6131240
Alignment:
Q  178 gatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 6131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 19253773 - 19253846
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  19253773 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 19253846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 37820737 - 37820664
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  37820737 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 37820664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 44762297 - 44762224
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  44762297 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 44762224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 3206456 - 3206388
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||||| |||||    
T  3206456 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaagattcttt 3206388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 55235255 - 55235347
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatgga-ttttgtgggattttgtagtgtaatttta 217  Q
    ||||| || |||||||||||||||||||||| || |||||||||||||||||| ||| |||||| |||||||||||||| || || |||||||    
T  55235255 gtctcatgatattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaatttta 55235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 539539 - 539476
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatgga 189  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 35337650 - 35337754
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||| ||||||       ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| || |    
T  35337650 gattttaaaagacttttttattatgaaaaag-tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcct 35337748  T
Q  108 tgtcat 113  Q
    ||||||    
T  35337749 tgtcat 35337754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 1439997 - 1439904
Alignment:
Q  158 aaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 251  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||| ||||  ||||||   | |||||||||||||| ||||| |||||||||    
T  1439997 aaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagattt 1439904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 1440212 - 1440140
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  1440212 tcttgtggtattcaatcaagactattttcaatttaaaaaa-gtcttgtgttattcaatcaagattctttgtcat 1440140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 20498155 - 20498228
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||||| ||||||||||    
T  20498155 tcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcat 20498228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 20832903 - 20833011
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||| ||||||||||||       | ||||||||||||||||||| |||||  |||||||||   |||| |||||||| ||||||    
T  20832903 tctatgagattttaaaagattttttaattatgaaaaagtt-ttgtggtattcaatcaagattttttgtaacttaaaa---gtctcgtggtatttaatcaa 20832998  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  20832999 gactctttgtcat 20833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26107169 - 26107280
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtctt-gtggtattcaatca 99  Q
    ||||||||||||||||||| ||||||||||||       ||||||  ||||||||||||||||||| |||||||||||| ||||| || ||| |||||||    
T  26107169 tctatgagattttaaaagattttttaattatgaaaaag-tcttgtaatattcaatcaagactttttgcaacttaaaaaa-gtcttagtcgtactcaatca 26107266  T
Q  100 agactctttgtcat 113  Q
    ||| ||||||||||    
T  26107267 agattctttgtcat 26107280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 51699737 - 51699666
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||| ||| ||| |||||||| |||||||  ||||||||||||| ||||||||||    
T  51699737 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaagattctttgtcat 51699666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 10139406 - 10139344
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| |||||||||||||    
T  10139406 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 10139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 23536023 - 23535890
Alignment:
Q  46 ggtattcaatcaagactttttacaacttaaaa-aatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaat 144  Q
    ||||||||||||||||| |||||||||||||| ||  | |||||| |||||||||| ||||||   ||||||||       |||| ||||||||||||||    
T  23536023 ggtattcaatcaagactctttacaacttaaaagaaaattttgtggcattcaatcaa-actctt---catcacttaaaaaaagtcttgtggtattcaaaat 23535928  T
Q  145 cattcaaatttcaaaggattgtttaataaattggattt 182  Q
    |||||||||||  |||||| ||||||| |||| |||||    
T  23535927 cattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 44276266 - 44276363
Alignment:
Q  7 agattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactct 106  Q
    ||||||||||||||||||||||||||        | |||||||||||||||| |||||||  || |||||||| ||| ||||||||||||| ||||||||    
T  44276266 agattttaaaagactttttaattatgaa------cctgtggtattcaatcaaaactttttgtaatttaaaaaaagtcatgtggtattcaattaagactct 44276359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 996345 - 996273
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||| ||||    
T  996345 tcttgtggtattcaatcaagactctttccaa-ttaaaaaaagtcttgtgttattcaatcaagattctttatcat 996273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 6035348 - 6035240
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       ||||||||||||||||||||  ||||| ||||||||| || || |  ||||||||||||||||    
T  6035348 tatgggattttaaaagactttttaattatgaaaaaa-tcttgtggtattcaatcaagtttttttgcaacttaaataaagt-tcatggtattcaatcaaga 6035251  T
Q  103 ctctttgtcat 113  Q
     ||||||||||    
T  6035250 gtctttgtcat 6035240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 34484269 - 34484217
Alignment:
Q  61 ctttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  34484269 ctttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcat 34484217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 48379073 - 48379176
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||||||||||||||||||||        ||| ||||||||||||||| | ||||| ||||||||||||  ||||||| | ||||||||||||||||    
T  48379073 gattttaaaagactttttaattat-caaaaagtctcgtggtattcaatcaaaattttttgcaacttaaaaaaaatcttgtgat-ttcaatcaagactctt 48379170  T
Q  108 tgtcat 113  Q
    ||||||    
T  48379171 tgtcat 48379176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 15492942 - 15492867
Alignment:
Q  186 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||| |||| || ||||| ||||||||||||||||| |||||||||||   || ||||||||||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattg 15492867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 25418314 - 25418385
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||| ||| ||| ||  |||||||| |||||||| ||||||||||||| ||||||||||    
T  25418314 ttgtggtattcaatcaaaactctttccattttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 25418385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 6975695 - 6975765
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgt 110  Q
    ||||||| ||||||   |||||| |||  ||||||||||| ||||||||||||||||||||||||||||||    
T  6975695 tcttgtgatattcagcgaagactctttgtaacttaaaaaaagtcttgtggtattcaatcaagactctttgt 6975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 44276338 - 44276408
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||| |||||| |||  || |||||||| ||||||||||||||||| || ||||||||||||    
T  44276338 tgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcat 44276408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 3999893 - 3999832
Alignment:
Q  52 caatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||  || |||||||| |||||||| ||||||||||||| ||||||||||    
T  3999893 caatcaagactttttctaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 3999832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 12103544 - 12103648
Alignment:
Q  7 agattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactct 106  Q
    ||||||||||||||||||||||||||       |||||| |||||||||||| ||| |||  || |||||||| |||| |||||||||||| |||| |||    
T  12103544 agattttaaaagactttttaattatgaaatag-tcttgttgtattcaatcaatactctttgtaatttaaaaaa-gtctcgtggtattcaattaagattct 12103641  T
Q  107 ttgtcat 113  Q
    |||||||    
T  12103642 ttgtcat 12103648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 52080003 - 52080047
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaat 52080047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 52618141 - 52618085
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  52618141 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 52618085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 6975737 - 6975870
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  6975737 tcttgtggtattcaatcaagactctttgttattttaaaaa-gtcttgaggtattcaatcaagactttt---catcatttaaaaa--gtcttgtggtattc 6975830  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattgga 179  Q
    ||||||||||||||||| ||| ||| |||| |||||||||    
T  6975831 aaaatcattcaaatttcgaagaattatttactaaattgga 6975870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 54625540 - 54625611
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||| |||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||| | || |||||||    
T  54625540 ttgtagtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattcgttgtcat 54625611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 29449151 - 29449045
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaactt--aaaaaatgtcttgtggtattcaatcaagactc 105  Q
    |||||||||||||||||| ||||||       ||||||||||||||||||| ||| ||| ||| ||  |||||| |||||||| ||||||||||||| ||    
T  29449151 gattttaaaagacttttttattatgaaaaaa-tcttgtggtattcaatcaatactctttccaaatttaaaaaaaagtcttgtgttattcaatcaagattc 29449053  T
Q  106 tttgtcat 113  Q
     |||||||    
T  29449052 cttgtcat 29449045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 6589510 - 6589583
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| |||||| |||  || |||||||| |||||||| ||||||||||| | || |||||||    
T  6589510 tcttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaatattccttgtcat 6589583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 28146192 - 28146139
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtatt 93  Q
    ||||||| ||||||||||| ||||||||||||||  |||| |||||||||||||    
T  28146192 tcttgtgatattcaatcaaaactttttacaactttcaaaaagtcttgtggtatt 28146139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 33808055 - 33807986
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||| | | ||| ||| |||||||| |||||||| |||||||| |||| ||||||||||    
T  33808055 gtggtattcaatcaaaattcttttcaatttaaaaaaagtcttgtgttattcaattaagattctttgtcat 33807986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 40246790 - 40246863
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| |||     ||||||||  ||||||| ||||||||||||| ||||||||||    
T  40246790 tcttgtggtattcaatcaagactctttctggtttaaaaaaaatcttgtgttattcaatcaagattctttgtcat 40246863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 3206381 - 3206325
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  3206381 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 3206325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 6131470 - 6131411
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    ||||||||||||||||||||| ||| ||| || ||||| |||||||| |||||||||||||    
T  6131470 ttgtggtattcaatcaagactctttccaa-ttgaaaaaagtcttgtgttattcaatcaaga 6131411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 20498239 - 20498295
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  20498239 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 20498295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 20833022 - 20833078
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||||||||||||||| |||| |  |||||||||| ||||||||||||||||    
T  20833022 tcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaa 20833078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 26107291 - 26107347
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  | |||||||| ||||||||||||||||    
T  26107291 tcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaa 26107347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 35337765 - 35337821
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  35337765 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 35337821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 48379187 - 48379243
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||||||||||| |||||||| |  |||||||||| ||||||||||||||||    
T  48379187 tcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaa 48379243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 53929304 - 53929248
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  53929304 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 53929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 54628831 - 54628895
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||||||    
T  54628831 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54628895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 55235103 - 55235199
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||||||||||||||||||||       | | ||| ||||||||||||||  |||||||||||||||| |||||||||| || |||||||| ||||    
T  55235103 attttaaaagactttttaattatgaaaaaa-tatagtgttattcaatcaagaccctttacaacttaaaaaa-gtcttgtggtctttaatcaagattctt 55235199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 539679 - 539588
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtatt 93  Q
    |||| |||||||||||||| ||||||||||||        |||||||||||||||||| ||| |||  || |||||||| |||||||||||||    
T  539679 tctaagagattttaaaagattttttaattatgaaaaagc-cttgtggtattcaatcaaaactctttgtaatttaaaaaaagtcttgtggtatt 539588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 29029954 - 29030025
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||||  ||  || | | |||| |||||||| |||||||| |||||||||||||||    
T  29029954 ttgtggtattcaatcaagactcattctaattaagaaaaagtcttgtgttattcaattaagactctttgtcat 29030025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 33807730 - 33807687
Alignment:
Q  211 aattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||||| || |||||||||||||||||||| ||||||||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttctt 33807687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 1440126 - 1440072
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  1440126 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1440072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 45134909 - 45134963
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||| |||||||||||| ||||| |||   ||||||||||    
T  45134909 ttgtggtattcaatcaagattttttacaactttaaaaaagtcccatggtattcaa 45134963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 52114476 - 52114547
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||  ||| ||| ||| ||||||||  ||||||| ||||||| ||||| ||||||||||    
T  52114476 tcttgtggtattcaatca--actattttcaatttaaaaaaaatcttgtgttattcaaccaagattctttgtcat 52114547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 2024147 - 2024184
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  2024147 aaaaagtcttgtggtattcaatcaagactatttgtcat 2024184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 2024153 - 2024222
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttg 109  Q
    ||||||||||||||||||||||| |||   | |||||||   ||||||| |||| |||||||||||||||    
T  2024153 tcttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagactctttg 2024222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 6131387 - 6131322
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||| |||||||||||||||  ||   | |||||||| || ||||||||||||||||||||||||    
T  6131387 ttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagactctt 6131322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  198 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 22057739 - 22057780
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||| |||||||| ||||||||||||| ||||||||||    
T  22057739 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 22057780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 52114558 - 52114615
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaa 96  Q
    |||||||||||||||||||||||||| |  |||| |||||| |||| |||||||||||    
T  52114558 tcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaa 52114615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 539580 - 539524
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||||||||||||||| |||| |  | |||||||| ||||||||||||||||    
T  539580 tcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaa 539524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 996351 - 996319
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  996351 aaaaagtcttgtggtattcaatcaagactcttt 996319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 3206462 - 3206430
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  3206462 aaaaagtcttgtggtattcaatcaagactcttt 3206430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 6589594 - 6589650
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  | |||||||| |||| |||||||||||    
T  6589594 tcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaa 6589650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 10139412 - 10139380
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  10139412 aaaaagtcttgtggtattcaatcaagactcttt 10139380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 18749558 - 18749618
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||    
T  18749558 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 18749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 19253767 - 19253799
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  19253767 aaaaagtcttgtggtattcaatcaagactcttt 19253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 20498149 - 20498181
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  20498149 aaaaagtcttgtggtattcaatcaagactcttt 20498181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #132
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 37820743 - 37820711
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  37820743 aaaaagtcttgtggtattcaatcaagactcttt 37820711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #133
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 39038070 - 39038122
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtat 92  Q
    ||||| |||||||||||||||||||| |  |||| ||||| ||||||||||||    
T  39038070 tcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtat 39038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #134
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 40246784 - 40246816
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  40246784 aaaaagtcttgtggtattcaatcaagactcttt 40246816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #135
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 44762303 - 44762271
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  44762303 aaaaagtcttgtggtattcaatcaagactcttt 44762271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #136
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 50762218 - 50762170
Alignment:
Q  48 tattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||||||||| ||||||| | || |||||||| ||||||||||||||||    
T  50762218 tattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaa 50762170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #137
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 52114548 - 52114580
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    |||||||| ||||||||||||||||||||||||    
T  52114548 ttaaaaaaagtcttgtggtattcaatcaagact 52114580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #138
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 54625622 - 54625678
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||||| |||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  54625622 tcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 54625678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 58325 - 58076
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| ||    
T  58325 gattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaa-gtcttgtggtattcagtcaagactttt 58228  T
Q  108 tgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtag 207  Q
    |  ||||||||       ||   |||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  58227 t--catcacttaaaaaaagttctgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtag 58130  T
Q  208 tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    | |||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  58129 tataattttaacaagagaaaatctttcatgaaaagatgagatttcttgagattg 58076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 135)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 3022909 - 3023127
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||||||||||||||||||   | || ||||| |||||| |||||||||||||||   ||| |||||||||       |||| |||||||||    
T  3022909 tcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaaga---tttttcatcacttaaaaaaagtcttgtggtattc 3023005  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3023006 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaa 3023105  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  3023106 aagatgagatttcttgagattg 3023127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 23101281 - 23101499
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  23101281 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 23101377  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101378 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 23101477  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  23101478 aagatgagatttcttgagattg 23101499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 28035022 - 28034804
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||||||||||||||||||   | || ||||| |||||| | ||||||||||||||| ||   ||||||||       |||| |||||||||    
T  28035022 tcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 28034926  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28034925 aaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaa 28034826  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  28034825 aagatgagatttcttgagattg 28034804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 28342330 - 28342548
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||| ||||| ||   ||||| ||       |||| |||||||||    
T  28342330 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagactttt---catcatttaaaaaaagtcttgtggtattc 28342426  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342427 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 28342526  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  28342527 aagatgagatttcttgagattg 28342548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 39784082 - 39784300
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  39784082 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 39784178  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784179 aaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 39784278  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  39784279 aagatgagatttcttgagattg 39784300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 40 - 260
Target Start/End: Complemental strand, 29614981 - 29614764
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| ||| |||||    
T  29614981 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtgatattc 29614885  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614884 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 29614785  T
Q  240 aagatgagatttcttgagatt 260  Q
    |||||||||||||||||||||    
T  29614784 aagatgagatttcttgagatt 29614764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 18838374 - 18838590
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||  || || ||||| |||||| ||||||||||||||||| ||   |||| |||       |||| |||||||||||    
T  18838374 ttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagactttt---catcgcttaaaaaaagtcttgtggtattcaa 18838470  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18838471 aatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 18838570  T
Q  242 gatgagatttcttgagattg 261  Q
    ||||||||||||||||||||    
T  18838571 gatgagatttcttgagattg 18838590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 41 - 261
Target Start/End: Original strand, 33382621 - 33382838
Alignment:
Q  41 cttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattca 140  Q
    |||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       ||||| |||||||||    
T  33382621 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtctcatggtattca 33382717  T
Q  141 aaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 240  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33382718 aaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaa 33382817  T
Q  241 agatgagatttcttgagattg 261  Q
    ||||||||||| || ||||||    
T  33382818 agatgagatttatttagattg 33382838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 44 - 261
Target Start/End: Original strand, 7993129 - 7993343
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaa 143  Q
    ||||||||||||||||||| ||| | | || ||||| |||||| ||||||||||||| ||| ||   ||||||||       ||||  ||||||||||||    
T  7993129 gtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaactttt---catcacttaaaaaaagtcttatggtattcaaaa 7993225  T
Q  144 tcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 243  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7993226 tcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 7993325  T
Q  244 tgagatttcttgagattg 261  Q
    | ||||||||||||||||    
T  7993326 taagatttcttgagattg 7993343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 9882451 - 9882236
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||||    
T  9882451 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattcaa 9882355  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9882354 aatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaa 9882256  T
Q  242 gatgagatttcttgagattg 261  Q
     |||||||||||||||||||    
T  9882255 aatgagatttcttgagattg 9882236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 75 - 261
Target Start/End: Original strand, 8675351 - 8675534
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaa 174  Q
    ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||||||||||| ||| ||| |||||||||||||||||    
T  8675351 aaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaa 8675447  T
Q  175 ttggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  8675448 ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttcttgagattg 8675534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 12740439 - 12740573
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||| |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||| ||||||||||||||||| ||||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 18914920 - 18914741
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    |||||||       |||| ||||||||||||||||||||||||||||||| |||||||||    
T  18914920 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaat 18914824  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  18914823 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 18914741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 43581307 - 43581096
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||| |||||||||||||||||||    |||||||       |||| |||||||||    
T  43581307 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 43581211  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  43581210 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 43581111  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  43581110 aacatgagatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 47914256 - 47914474
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||| |||||||||||||||||||||||    |||||||       |||| ||| |||||    
T  47914256 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtgatattc 47914352  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  47914353 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 47914452  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||| ||||||    
T  47914453 aacatgagatttcttaagattg 47914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 973176 - 973385
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||        | | |||||||||||    
T  973176 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaatttagtggtattcaa 973272  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  973273 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaa 973372  T
Q  242 gatgagatttctt 254  Q
     ||||||||||||    
T  973373 catgagatttctt 973385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 7718547 - 7718368
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||    
T  7718547 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat 7718451  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  7718450 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttctt 7718368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 261
Target Start/End: Original strand, 509603 - 509847
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       ||||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||||    
T  509603 tatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaaga 509701  T
Q  103 ctctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattt 202  Q
    || ||   ||||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||          ||    
T  509702 ctttt---catcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggat----------tt 509788  T
Q  203 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  509789 tgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 509847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 44256983 - 44256765
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||| ||||| ||||||||||||||   | || |||||  ||||  ||||||||||||||||| ||   ||||||||       || |||||||||||    
T  44256983 tcttgtagtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagactttt---catcacttaaaaaaagtatcgtggtattc 44256887  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||| |||||| ||    
T  44256886 aaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaa 44256787  T
Q  240 aagatgagatttcttgagattg 261  Q
    || ||||||||| |||||||||    
T  44256786 aatatgagattttttgagattg 44256765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 47879158 - 47879376
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||| |||||||||||||||||||||||    |||||||       |||| ||| |||||    
T  47879158 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtgatattc 47879254  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||| |||||||||||||||||||  ||||| |||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||    
T  47879255 aaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 47879354  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||| ||||||    
T  47879355 aacatgagatttcttaagattg 47879376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 7719445 - 7719266
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    |||||||        ||| |||||||||||||||||||||||||| || |||||||||||    
T  7719445 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaat 7719349  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  7719348 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 7719266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 10676668 - 10676460
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       |||||||||||| |||||||||| ||| ||| |||||||| |||||||||||||||||||||||| ||    
T  10676668 gattttaaaagactttttaattatgaaaaaa-tcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagactttt 10676570  T
Q  108 tgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtag 207  Q
       ||||||||       ||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||| | |    
T  10676569 ---catcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttg 10676473  T
Q  208 tgtaattttaaca 220  Q
    || ||||||||||    
T  10676472 tgaaattttaaca 10676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 30440786 - 30440997
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | ||||||||  ||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  30440786 tcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 30440882  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| |||||||  | ||||||||||||| ||||    
T  30440883 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaa 30440982  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  30440983 aacatgagatttctt 30440997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 37972981 - 37972866
Alignment:
Q  146 attcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 245  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  246 agatttcttgagattg 261  Q
    ||| ||||||||||||    
T  37972881 agacttcttgagattg 37972866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 40996834 - 40996655
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    ||| |||       |||| |||||||||||||||||||||||||| ||||||||||||||    
T  40996834 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat 40996738  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40996737 aaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 40996655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 44122115 - 44121909
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||        ||| |||||||||||    
T  44122115 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaaatcttgtggtattcaa 44122019  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||          |||||||||||||||||||||||||||| |||||||    
T  44122018 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttaatgaaaa 44121929  T
Q  242 gatgagatttcttgagattg 261  Q
    |||||||||| |||||||||    
T  44121928 gatgagattttttgagattg 44121909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 12893398 - 12893609
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||||||||| |||||||||||||    |||||||       ||||  ||||||||    
T  12893398 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactctta---atcacttaaaaaaagtctaatggtattc 12893494  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||| ||||||||||||||  ||||| ||||||||||||| |||||| ||||| ||||||| || ||||||||||||||||||    
T  12893495 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaa 12893594  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  12893595 aacatgagatttctt 12893609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 34695295 - 34695474
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| || ||||||||||||||||||||||||    |||||||       |||  ||||||||||||| |||||||||||| ||||||||||||||    
T  34695295 ttaaaaaaagttttgtggtattcaatcaagactctta---atcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaat 34695391  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  34695392 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 34695474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 41827402 - 41827505
Alignment:
Q  158 aaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  41827402 aaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttgag 41827501  T
Q  258 attg 261  Q
    ||||    
T  41827502 attg 41827505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 44343613 - 44343402
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||| ||||||||||||||||||    |||||||       || | ||||||||     
T  44343613 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactctta---atcacttaaaaaaagtttagtggtattt 44343517  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||| |||    
T  44343516 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaa 44343417  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  44343416 aacatgagatttctt 44343402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 39219594 - 39219383
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaat-gtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    ||||||||||||||||||||||| ||| ||| ||||||||  |||||||| ||||||||||||||||||    |||||||       ||||  |||||||    
T  39219594 tcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactctta---atcacttaaaaaaagtctattggtatt 39219498  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||  | | ||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |    
T  39219497 caaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataa 39219399  T
Q  239 aaagatgagatttctt 254  Q
    ||| ||||||||||||    
T  39219398 aaacatgagatttctt 39219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 20275448 - 20275269
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| ||||| |||||||||||||||||||||    |||||||       ||||  ||||||||||||||||||||||||| ||||||||||||||    
T  20275448 ttaaaaaaagtcttatggtattcaatcaagactctta---atcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaat 20275352  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||  ||||||||||||    
T  20275351 aaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 32883765 - 32883948
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||| ||||||||||||||||||||||   | || ||||| ||||||  ||||||||| |||||| ||   ||||||||       |||| |||||||||    
T  32883765 tcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagactttt---catcacttaaaaaaagtcttgtggtattc 32883861  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaa 226  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  32883862 aaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 37327910 - 37328118
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||| ||||       |||| |||||||||    
T  37327910 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---cattacttaaaaaaagtcttgtggtattc 37328006  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||          |||||||||||| |||||||||||| |||||||||||||||||    
T  37328007 aaaatcattcaaatttcaaaggattgtttaataaattgaattttgat----------ggattttgtagtataattttaacaaaaaaaagtctttcatgaa 37328096  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||| |||||| |||||||||    
T  37328097 aagataagattttttgagattg 37328118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 43187491 - 43187356
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    ||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||| ||||||| ||||||| ||||| |||||||||||||||    
T  43187491 gtctcatggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaa 43187392  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||| | ||||||||| ||| |||||    
T  43187391 aagtctttcatgaagacatgagattttttgggattg 43187356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 46405648 - 46405440
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||| ||||||||||||||||| |||     || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  46405648 tcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 46405552  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||| ||| || ||    
T  46405551 aaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtatttaataaa 46405462  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  46405461 aagatgagatttcttgagattg 46405440  T

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Target: chr7; HSP #37
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 12963684 - 12963874
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| | |||||||||||||   ||| |||| ||||       |||||||||||| |    
T  12963684 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaaga---tttttcattacttaaaaaaagtctcgtggtatcc 12963780  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 233  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||  ||||||||||||||    
T  12963781 aaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtcttt 12963874  T

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Target: chr7; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 251
Target Start/End: Original strand, 10068449 - 10068658
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtctt-gtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    |||||||||||| |||||||||| ||| | | || ||||| ||||| | |||||||||||||||   ||| |||||||||       |||| ||||||||    
T  10068449 tcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaaga---tttttcatcacttaaaaaaagtcttgtggtatt 10068545  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||  |||||||||||||||||||  |||| |||||||||||||||||||| ||||| ||||||| || |||||||| |||||| |    
T  10068546 caaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataa 10068645  T
Q  239 aaagatgagattt 251  Q
    ||| |||||||||    
T  10068646 aaacatgagattt 10068658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 130 - 261
Target Start/End: Complemental strand, 32143047 - 32142916
Alignment:
Q  130 cgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 229  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||    
T  32143047 cgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 32142948  T
Q  230 ctttcatgaaaagatgagatttcttgagattg 261  Q
    ||| ||| |||| |||||||||||| ||||||    
T  32142947 cttccataaaaacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 40460924 - 40460716
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| |||||||| |||||| |||   | || ||||| |||||| | ||||||||||||||| ||   ||||||||       |||| |||||||||    
T  40460924 tcttgtgatattcaattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 40460828  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||          |||||||||||||||||||||| |||||||||||    
T  40460827 aaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaaatctttcatgaa 40460738  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||||||||||    
T  40460737 aatatgagatttcttgagattg 40460716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17001320 - 17001209
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  17001320 tctatgagattttaaaaaactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 17001222  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  17001221 gactctttgtcat 17001209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 29585460 - 29585705
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| |||||||||||||| ||||||||||||       | ||||||||||||||||||| | |||   | || ||||| |||||| |||||||||||||    
T  29585460 tctacgagattttaaaagattttttaattatgaaaaagtt-ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaa 29585558  T
Q  101 gactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggat 200  Q
     ||| ||    |||||||       ||||  ||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||              
T  29585559 aactttt----atcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggat---------- 29585644  T
Q  201 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  29585645 tttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttcttgagattg 29585705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 29615061 - 29614950
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  29615061 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 29614963  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  29614962 gactctttgtcat 29614950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 48117890 - 48117779
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  48117890 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 48117792  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  48117791 gactctttgtcat 48117779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 34009002 - 34009214
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtc-tcgtggtatt 138  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||| ||||||    |||||||       ||| | ||||||||    
T  34009002 tcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactctta---atcacttaaaaaaagtcctagtggtatt 34009098  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||| ||||| || |  ||||||| ||  ||||||||||||| ||    
T  34009099 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaaga 34009198  T
Q  239 aaagatgagatttctt 254  Q
    ||| ||||||||||||    
T  34009199 aaacatgagatttctt 34009214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 37327837 - 37327941
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  37327837 gattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 37327935  T
Q  108 tgtcat 113  Q
    ||||||    
T  37327936 tgtcat 37327941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 19251522 - 19251672
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||| |   ||| |||||||||       ||||||||||||||    
T  19251522 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaa---tttttcatcacttaaaaaaagtctcgtggtattc 19251618  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggatttt 193  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  19251619 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 33382540 - 33382651
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  33382540 tctatgagattttaaaagactttttaattatgaaaaag-tcttatggtattcaatcaagactttttgcaacttaaaaaaagccttgtggtattcaatcaa 33382638  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  33382639 gactctttgtcat 33382651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  231 t 231  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23101201 - 23101312
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  23101201 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaa 23101299  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  23101300 gactctttgtcat 23101312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28342250 - 28342361
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  28342250 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaa 28342348  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  28342349 gactctttgtcat 28342361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 39028008 - 39028111
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  39028008 attttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagactcttt 39028106  T
Q  109 gtcat 113  Q
    |||||    
T  39028107 gtcat 39028111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 39784002 - 39784113
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       || |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  39784002 tctatgggattttaaaagactttttaattatgaaaaag-tcatgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 39784100  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  39784101 gactctttgtcat 39784113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 41827219 - 41827328
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  41827219 tatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 41827317  T
Q  103 ctctttgtcat 113  Q
    || ||||||||    
T  41827318 ctttttgtcat 41827328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 131 - 254
Target Start/End: Original strand, 7113530 - 7113653
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||| |||||||||||  |||||||||||||||||  ||||| ||| |||||||||||||||| |||   ||||||| || |||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  231 tttcatgaaaagatgagatttctt 254  Q
    ||||||||||| |||| |||||||    
T  7113630 tttcatgaaaacatgaaatttctt 7113653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 7993052 - 7993152
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  7993052 gattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctcgtggtattcaatcaagactctt 7993150  T
Q  108 tg 109  Q
    ||    
T  7993151 tg 7993152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 33892461 - 33892269
Alignment:
Q  46 ggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatc 145  Q
    ||||||||||||| ||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||||||||    
T  33892461 ggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaacaaagtcttgtggtattcaaaatc 33892365  T
Q  146 attcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 245  Q
    ||||||||||| || ||||||| ||||||||||||||  ||| |||||||          ||||||||||||||||||||||||||||||| ||||||||    
T  33892364 attcaaatttcgaatgattgttaaataaattggatttttatgaattttgt----------agtgtaattttaacaagaaaaagtctttcattaaaagatg 33892275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 39028080 - 39028288
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| | ||||||||||||||| ||   ||||||||       |||| ||| |||||    
T  39028080 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagactttt---catcacttaaaaaaagtcttgtgttattc 39028176  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||| |||||||| | || |||||||||||||||||||||| |||||||          |||||||||||| |||||||||||||||| |||||||||    
T  39028177 aaaatcgttcaaattacgaaagattgtttaataaattggattttgatggat----------tttgtagtgtaactttaacaagaaaaagtttttcatgaa 39028266  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||   |||||||||||||||||    
T  39028267 aaacagagatttcttgagattg 39028288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19251442 - 19251553
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| ||||||||||||||||||||||||| |       |||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  19251442 tctaagagattttaaaagactttttaattacgaaaaag-tcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaa 19251540  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  19251541 gactctttgtcat 19251553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 40461003 - 40460893
Alignment:
Q  2 ctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaag 101  Q
    |||||||||||||||||||||||||||||||       | |||||||||| |||||||||||||| ||| ||||||||||||||||| |||||||| |||    
T  40461003 ctatgagattttaaaagactttttaattatgaaaaagtt-ttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaag 40460905  T
Q  102 actctttgtcat 113  Q
    ||||||||||||    
T  40460904 actctttgtcat 40460893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 12963609 - 12963715
Alignment:
Q  6 gagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactc 105  Q
    ||||||||||||||||||||||||| |       |||||||||| |||||||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  12963609 gagattttaaaagactttttaattacgaaaaag-tcttgtggtactcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagactc 12963707  T
Q  106 tttgtcat 113  Q
    ||||||||    
T  12963708 tttgtcat 12963715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 9882526 - 9882422
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       |||| |||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||    
T  9882526 gattttaaaagactttttaattatgaaaaag-tcttatggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaatcaagactctt 9882428  T
Q  108 tgtcat 113  Q
    ||||||    
T  9882427 tgtcat 9882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18838292 - 18838400
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||| ||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  18838292 tctatgggattataaaagactttttaattatgaaaatg-tcttgtggtattcaatcaagactttttgcaacttaaaaaaaatattgtggtattcaatcaa 18838390  T
Q  101 gactctttgt 110  Q
    ||||||||||    
T  18838391 gactctttgt 18838400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12740276 - 12740387
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||| ||| |||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  12740276 tctatgagattttaaaagactttttaattatgaaaaaa-tctggtgatatttaattaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 12740374  T
Q  101 gactctttgtcat 113  Q
    || ||||||||||    
T  12740375 gattctttgtcat 12740387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 46405720 - 46405619
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       || |||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||||||||||    
T  46405720 attttaaaagactttttaattatgaaaaag-tcatgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgcggtattcaatcaagactcttt 46405622  T
Q  109 gtc 111  Q
    |||    
T  46405621 gtc 46405619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3022829 - 3022940
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||| ||||||||||||       | || ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  3022829 tctatgggattttaaaagattttttaattatgaaaaagtt-ttatggtatttaatcaagactttttaaaacttaaaaaaagtcttgtggtattcaatcaa 3022927  T
Q  101 gactctttgtcat 113  Q
    |||| ||||||||    
T  3022928 gactttttgtcat 3022940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 261
Target Start/End: Original strand, 19810874 - 19810990
Alignment:
Q  135 tattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 234  Q
    ||||||||||||||||||||||||| |||||||||||||||          |||||||||||| ||||| ||||| ||||||| ||  |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  235 atgaaaagatgagatttcttgagattg 261  Q
    ||||||| |||||||||||||||||||    
T  19810964 atgaaaacatgagatttcttgagattg 19810990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||  |||||||||||||||||||| || |  ||||||| || |||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 34695148 - 34695247
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||| ||||||       ||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||||||||||    
T  34695148 gattttaaaagacttttttattatgaaaaag-tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagactctt 34695246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 17001240 - 17001042
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | ||  |||| |||||| |||||||||| |||||| ||   ||||||||        | |||||||||||    
T  17001240 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagactttt---catcacttaaaaaaaatatcgtggtattc 17001144  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||                    ||||||||||||| ||||||||||||||||||||||||    
T  17001143 aaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattataacaagaaaaagtctttcatgaa 17001064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 47066821 - 47066881
Alignment:
Q  197 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 257  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  47066821 ggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttcttgag 47066881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43187640 - 43187529
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| |||||||||||||||||||||||||||       ||||||||||||||||||||||| |||  || |||||||| ||||| ||||||||||| ||    
T  43187640 tctaagagattttaaaagactttttaattatgaaagag-tcttgtggtattcaatcaagactctttgtaatttaaaaaaagtcttatggtattcaattaa 43187542  T
Q  101 gactctttgtcat 113  Q
     ||||||||||||    
T  43187541 aactctttgtcat 43187529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 12893356 - 12893429
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  12893356 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 12893429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 30440744 - 30440817
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  30440744 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 30440817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 43581349 - 43581276
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  43581349 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 43581276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 44343655 - 44343582
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  44343655 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 44343582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 44623491 - 44623354
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||||| |||   | |||||||| ||||||||||||| ||||||||||||   |||||||||       |||||||| |||||||    
T  44623491 ttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactct---tcatcactttaaaaaggtctcgtgatattcaa 44623395  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    ||||||||| ||||| || || |||||||||||||| ||||    
T  44623394 aatcattcatatttctaaagactgtttaataaattgaattt 44623354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 727594 - 727691
Alignment:
Q  134 gtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 233  Q
    ||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||| ||||| ||||||| || ||||||||||||    
T  727594 gtattcaaaatcattcaaatttcaaaggattgtttaataaat----------cagattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 727683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 9179895 - 9180064
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| || |||| |||||||||||||||||||   ||||||||       |||| ||||||| |||||||| | ||||| | ||||||||||||||    
T  9179895 ttaaaaaaagttttgtcgtattcaatcaagactctt---catcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaaggattgtttaat 9179991  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||||||          |||||||||||||| ||||| | ||||| ||  ||||||||||||||||||| ||||||||||||    
T  9179992 aaattgga----------ttttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttctt 9180064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32883684 - 32883796
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatc-aagactttttacaacttaaaaaatgtcttgtggtattcaatca 99  Q
    |||||| |||||||||||| ||||||||||||       | ||||| ||||||||| |||||||||| |||||||||||| ||||| |||||||||||||    
T  32883684 tctatgggattttaaaagattttttaattatgaaaaagtt-ttgtgatattcaatctaagactttttgcaacttaaaaaaagtcttatggtattcaatca 32883782  T
Q  100 agactctttgtcat 113  Q
    ||||| ||||||||    
T  32883783 agactttttgtcat 32883796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37973071 - 37972994
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaa 79  Q
    ||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  37973071 tctatgagattttaaaatactttttaattatgaaagag-tcttgtggtattcaatcaagactttttacaacttaaaaaa 37972994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 47066770 - 47066826
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 47066826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 10068376 - 10068476
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       ||||||| ||||||||||| ||| ||| ||| |||||||| ||||||||||||| |||||||||||||    
T  10068376 gattttaaaagactttttaattatgaaaaag-tcttgtgatattcaatcaaaactctttgcaatttaaaaaaagtcttgtggtatttaatcaagactctt 10068474  T
Q  108 tg 109  Q
    ||    
T  10068475 tg 10068476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 28035061 - 28034991
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||||    
T  28035061 ttgtggtattcaattaagattttttgcaacttaaaaaa-gtcttgtggtattcaatcaagactttttgtcat 28034991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 31638948 - 31639015
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggatttt 193  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||    
T  31638948 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 973132 - 973205
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||||| ||||||||||    
T  973132 tcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcat 973205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 34695221 - 34695294
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| || |||||||    
T  34695221 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcat 34695294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 40996908 - 40996835
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||| ||| ||||||||||||| ||||||||||    
T  40996908 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtctcgtgttattcaatcaagattctttgtcat 40996835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21067785 - 21067870
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgt 87  Q
    ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  21067785 tctatgagattttaaaagattttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaagaaaagtcttgt 21067870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 44257060 - 44256952
Alignment:
Q  4 atgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagac 103  Q
    |||||||||||||| | ||||||||||||       ||| ||||||||||||||||||||||| |||| | ||||| ||||||| ||||| |||||||||    
T  44257060 atgagattttaaaaaagtttttaattatgaaaaagttct-gtggtattcaatcaagactttttgcaaccttaaaaaagtcttgtagtatttaatcaagac 44256962  T
Q  104 tctttgtcat 113  Q
    | ||||||||    
T  44256961 tttttgtcat 44256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 48154806 - 48154750
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  48154806 tcttgtggtattcaatcaagactatttacaacttataaaaagtcttgtggtattcaa 48154750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 3797346 - 3797243
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       | ||| ||||||||||||||||| ||| ||| |||||||| ||| | || |||||||||||||||||||    
T  3797346 attttaaaagactttttaattatgaaatagtt-ttgaggtattcaatcaagactctttgcaatttaaaaaaagtcatctgatattcaatcaagactcttt 3797248  T
Q  109 gtcat 113  Q
    |||||    
T  3797247 gtcat 3797243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 31638826 - 31638896
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||| | ||||||||||    
T  31638826 tgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttgtcat 31638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 727460 - 727533
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||| ||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||| | ||||||||||    
T  727460 tcttgcggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttgtcat 727533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 3797266 - 3797129
Alignment:
Q  48 tattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcat 147  Q
    ||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| ||||||||||| |||||    
T  3797266 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattcaagatcat 3797170  T
Q  148 tcaaatttcaaaggattgtttaataaattggatttcgatgg 188  Q
    | ||||||  ||||||||||||||||||| ||||| |||||    
T  3797169 taaaattttgaaggattgtttaataaattagattttgatgg 3797129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 47879116 - 47879189
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| ||| ||| ||| || ||||| |||||||| ||||||||||||| ||||||||||    
T  47879116 tcttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagattctttgtcat 47879189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 47914214 - 47914287
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| ||| ||| ||| || ||||| |||||||| ||||||||||||| ||||||||||    
T  47914214 tcttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagattctttgtcat 47914287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 34008965 - 34009033
Alignment:
Q  45 tggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| | ||||||||    
T  34008965 tggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcat 34009033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 44122158 - 44122086
Alignment:
Q  42 ttgtggtattcaatcaa-gactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||| || ||||| ||||||||||||    ||||||||||||||||||||||||||||||    
T  44122158 ttgtggtattcaatcaaagattttttgcaacttaaaaaaaaatttgtggtattcaatcaagactctttgtcat 44122086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggat 190  Q
    |||||||| ||||||||||||||||| || ||||||||||| |||||||||| |||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 18914994 - 18914923
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtc 111  Q
    ||||||||||||||||||||||| ||| ||| || ||||| |||||||| ||||||||||| | ||||||||    
T  18914994 tcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaaattctttgtc 18914923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 20275522 - 20275449
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||| | ||| ||| |||||||| |||||| | ||||||||||||| || |||||||    
T  20275522 tcttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgggttattcaatcaagattccttgtcat 20275449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29893026 - 29893128
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||   | || ||||  ||| || |||||||||||||    
T  29893026 tctatgagattttaaaagactttttaattatg-aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaa 29893124  T
Q  101 gact 104  Q
    ||||    
T  29893125 gact 29893128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 1470362 - 1470291
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggatttt 203  Q
    ||||||||||||||| ||||||||| |||| |||||||||| |||| ||||| ||| | ||||||||||||||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggatttt 1470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 3797232 - 3797176
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  3797232 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 3797176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 8675358 - 8675414
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  8675358 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 8675414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 9882411 - 9882355
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  9882411 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 9882355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 41827339 - 41827395
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||| |||||||||||||||| | ||||||||||| ||||||||||||||||    
T  41827339 tcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaa 41827395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 7719520 - 7719446
Alignment:
Q  40 tcttgtggtattcaatcaa-gactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| |||| ||| ||| |||||||| |||||||| ||||||||||| | | ||||||||    
T  7719520 tcttgtggtattcaatcaaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattatttgtcat 7719446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33892548 - 33892436
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaactt--aaaaaatgtcttgtggtattcaatc 98  Q
    ||||||||||||||||||||||||||||||||       | ||||||||||||||||| | ||||| ||| ||  ||||||  ||||  |||||||||||    
T  33892548 tctatgagattttaaaagactttttaattatgaaaaagtt-ttgtggtattcaatcaaaattttttgcaatttaaaaaaaaattctt-aggtattcaatc 33892451  T
Q  99 aagactctttgtcat 113  Q
    || ||||||||||||    
T  33892450 aacactctttgtcat 33892436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 7113409 - 7113466
Alignment:
Q  45 tggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||||||||||||||||| ||| ||| |||||||| |||||||| |||||||| ||||    
T  7113409 tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaaga 7113466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 8078343 - 8078416
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| || |||||    ||||| ||||||||||||| ||||||||||    
T  8078343 tcttgtggtattcaatcaagactctttccaattttaaaaaaaatttgtgttattcaatcaagattctttgtcat 8078416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 29893058 - 29893095
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||| |||||||||||||||||||||||||||||||||    
T  29893058 aaaaagtcttgtggtattcaatcaagactctttgtcat 29893095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 31494394 - 31494443
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtatt 93  Q
    ||||||||||||||||| ||||||||||||||||| |||||  |||||||    
T  31494394 gtggtattcaatcaagattttttacaacttaaaaattgtctcttggtatt 31494443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #115
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 7718537 - 7718481
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  7718537 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7718481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #116
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 18838414 - 18838470
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |   ||||||||| ||||||||||||||||    
T  18838414 tcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaa 18838470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #117
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 18914910 - 18914854
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  18914910 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 18914854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #118
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 33892425 - 33892369
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  ||||||| || ||||||||||||||||    
T  33892425 tcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaa 33892369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #119
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 44122075 - 44122019
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  ||||||||||  |||||||||||||||    
T  44122075 tcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaa 44122019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #120
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 10617024 - 10617099
Alignment:
Q  166 tttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||| ||||| ||||||||||||| |||||| |||||  ||||||  || || ||||||||||| ||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaa 10617099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #121
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 47066679 - 47066717
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  47066679 aaaaaagtcttgtggtattcaatcaaaactctttgtcat 47066717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #122
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 8078336 - 8078369
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||| ||||||||||||||||||||||||||||    
T  8078336 aaaaaagtcttgtggtattcaatcaagactcttt 8078369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #123
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 32143178 - 32143121
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaat 97  Q
    ||||||| ||||||||||||||| |||  || |||||||| |||||||| ||||||||    
T  32143178 tcttgtgatattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaat 32143121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #124
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 973126 - 973158
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  973126 aaaaagtcttgtggtattcaatcaagactcttt 973158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #125
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 7719435 - 7719379
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  ||||||||||  ||| |||||||||||    
T  7719435 tcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaa 7719379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #126
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 7993167 - 7993223
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||||||||||||| |||||| |  |||||||||| ||||| ||||||||||    
T  7993167 tcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaa 7993223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #127
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 12893350 - 12893382
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  12893350 aaaaagtcttgtggtattcaatcaagactcttt 12893382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #128
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 18915000 - 18914968
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  18915000 aaaaagtcttgtggtattcaatcaagactcttt 18914968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #129
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 20275438 - 20275382
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||| |||||||||||||||||| || |  |||||||||| ||||| ||||||||||    
T  20275438 tcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaa 20275382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #130
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 33382662 - 33382718
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||  ||||||||||    
T  33382662 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaa 33382718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #131
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 39219600 - 39219568
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  39219600 aaaaagtcttgtggtattcaatcaagactcttt 39219568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #132
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 40996824 - 40996768
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |   ||||||||| |||| |||||||||||    
T  40996824 tcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaa 40996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #133
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 43581355 - 43581323
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  43581355 aaaaagtcttgtggtattcaatcaagactcttt 43581323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #134
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 43679412 - 43679444
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  43679412 aaaaagtcttgtggtattcaatcaagactcttt 43679444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #135
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 44343661 - 44343629
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  44343661 aaaaagtcttgtggtattcaatcaagactcttt 44343629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 3e-70; HSPs: 144)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 5441392 - 5441610
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  5441392 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 5441488  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441489 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 5441588  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  5441589 aagatgagatttcttgagattg 5441610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 27768044 - 27768262
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  27768044 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 27768140  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768141 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 27768240  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  27768241 aagatgagatttcttgagattg 27768262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 54853686 - 54853468
Alignment:
Q  40 tcttgtggtattcaatcaagact-ttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    ||||||||||||||||||||||| |||| ||  |||||||| ||||||  |||||||||||||||| ||   ||||||||       |||| ||||||||    
T  54853686 tcttgtggtattcaatcaagactctttttcattttaaaaaa-gtcttgaagtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtatt 54853591  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54853590 caaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatga 54853491  T
Q  239 aaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||    
T  54853490 aaagatgagatttcttgagattg 54853468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 54341132 - 54341350
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||| |||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  54341132 tcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 54341228  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341229 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 54341328  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  54341329 aagatgagatttcttgagattg 54341350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 37828620 - 37828402
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | ||  |||| |||||| |||||||||||||||   ||| |||||| ||       |||| |||||||||    
T  37828620 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaaga---tttttcatcatttaaaaaaagtcttgtggtattc 37828524  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37828523 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaa 37828424  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  37828423 aagatgagatttcttgagattg 37828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 37915815 - 37916033
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| | ||  | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  37915815 tcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 37915911  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  37915912 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaa 37916011  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||| |||||| |||||||||    
T  37916012 aagataagatttattgagattg 37916033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 51320911 - 51321127
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||||    
T  51320911 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattcaa 51321007  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||    
T  51321008 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaa 51321107  T
Q  242 gatgagatttcttgagattg 261  Q
    ||||||||||||||||||||    
T  51321108 gatgagatttcttgagattg 51321127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 75 - 261
Target Start/End: Original strand, 32322114 - 32322297
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaa 174  Q
    ||||| |||||| |||||||||||||||   ||| |||||||||       |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  32322114 aaaaaagtcttgaggtattcaatcaaga---tttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 32322210  T
Q  175 ttggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  32322211 ttgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttcttgagattg 32322297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 48261198 - 48261333
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    || ||||||||||||| |||||||||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattg 48261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 25331119 - 25331330
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| ||| |||||    
T  25331119 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtgatattc 25331215  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  25331216 aaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 25331315  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  25331316 aacatgagatttctt 25331330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 3 - 261
Target Start/End: Original strand, 23987166 - 23987410
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       ||||||||||||||||||| ||| |||   | || ||||| |||||| ||||||||||||| |    
T  23987166 tatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaa 23987264  T
Q  103 ctctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattt 202  Q
    || ||   ||||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||          ||    
T  23987265 ctttt---catcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggat----------tt 23987351  T
Q  203 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23987352 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 23987410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 1112913 - 1113092
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||    
T  1112913 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtttaat 1113009  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||  ||||  |||||||||| |||||||||||||||||||| ||||||||||||    
T  1113010 aaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttctt 1113092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 30967517 - 30967309
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| || ||| |||||||||||||||   ||| |||||||||       |||| |||||||||    
T  30967517 tcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaaga---tttttcatcacttaaaaaaagtcttgtggtattc 30967421  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| |||||||||||    
T  30967420 aaaatcattcaaatttcaaaggattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaa 30967331  T
Q  240 aagatgagatttcttgagattg 261  Q
    || || ||||||||||||||||    
T  30967330 aaaataagatttcttgagattg 30967309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 40 - 260
Target Start/End: Complemental strand, 32951054 - 32950837
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||| |||||||||||||||||||||||    |||||||       |||| |||||||||    
T  32951054 tcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 32950958  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||||||||||| ||||| ||||||| || |||||| |||||||||||    
T  32950957 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaa 32950858  T
Q  240 aagatgagatttcttgagatt 260  Q
    || |||||||||||| |||||    
T  32950857 aacatgagatttcttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 41881301 - 41881089
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnn-gtctcgtggtatt 138  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||        || | ||||||||    
T  41881301 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaagtttagtggtatt 41881205  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  41881204 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 41881105  T
Q  239 aaagatgagatttctt 254  Q
    ||| ||||||||||||    
T  41881104 aaacatgagatttctt 41881089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 22202003 - 22202214
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  22202003 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 22202099  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||| |||||||||| |||||||||||||||   |||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  22202100 aaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 22202199  T
Q  240 aagatgagatttctt 254  Q
    || || |||||||||    
T  22202200 aacattagatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 75 - 261
Target Start/End: Original strand, 55302866 - 55303049
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaa 174  Q
    ||||| ||| |||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  55302866 aaaaaagtcatgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 55302962  T
Q  175 ttggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |  ||||| ||||||| |||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||||||    
T  55302963 tcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 12112933 - 12113151
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||| ||||||    |||||||       ||||  ||||||||    
T  12112933 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactctta---atcacttaaaaaaagtctaatggtattc 12113029  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  |||||  ||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||    
T  12113030 aaaatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 12113129  T
Q  240 aagatgagatttcttgagattg 261  Q
    || ||||||||||||| |||||    
T  12113130 aacatgagatttcttgggattg 12113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 261
Target Start/End: Complemental strand, 30009863 - 30009677
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| ||| |||||||||||||||||||||||    |||||||       |||| |||||||||||||||||| |||||| ||| |||||||||||    
T  30009863 ttaaaaaaagtcctgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaat 30009767  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||  ||||| |||||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| |||||||||||| ||||||    
T  30009766 aaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 30009677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 76 - 254
Target Start/End: Original strand, 1044831 - 1045006
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||||||||||||||||||||||||    |||||||       |||| ||||||||||||| ||||||| |||| ||||||||||||||||||    
T  1044831 aaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaat 1044927  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
      ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  1044928 cagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 126 - 255
Target Start/End: Original strand, 41725196 - 41725322
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||   ||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  226 aagtctttcatgaaaagatgagatttcttg 255  Q
    || |||||||||||||||||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttcttg 41725322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 3436670 - 3436792
Alignment:
Q  132 tggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 231  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||||||||||||||||| |||||||||| |||||||| |    
T  3436670 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagttt 3436769  T
Q  232 ttcatgaaaagatgagatttctt 254  Q
    |||||||||| || |||||||||    
T  3436770 ttcatgaaaacataagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 72 - 261
Target Start/End: Original strand, 7007394 - 7007580
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| ||| |||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||    
T  7007394 ttaaaaaaagtcatgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat 7007490  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||  ||||| |||| ||||||||||||||| ||||| ||||||| || |||||  | ||||||||||| |||||||||||| ||||||    
T  7007491 aaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 44770987 - 44770862
Alignment:
Q  127 tctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaa 226  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||||| ||||| |||||||| |||||||    
T  44770987 tctcatggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaa 44770888  T
Q  227 agtctttcatgaaaagatgagatttc 252  Q
    ||||||||||||  | ||||||||||    
T  44770887 agtctttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 34228718 - 34228583
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||| ||||||| || |||||||||||||||  ||||| |||||||||||| ||||||| ||||| ||||||| || ||||    
T  34228718 gtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 34228619  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||| |||||||||||| ||||||    
T  34228618 aagtctttcatgaaaacatgagatttcttaagattg 34228583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 39479485 - 39479362
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||    
T  39479485 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtc 39479386  T
Q  231 tttcatgaaaagatgagatttctt 254  Q
    ||||||||||  ||||||||||||    
T  39479385 tttcatgaaagcatgagatttctt 39479362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 41320881 - 41321016
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||| || ||||| |||||||  | ||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||| |||| |||||||||||| ||||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattg 41321016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 254
Target Start/End: Original strand, 42786708 - 42786883
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||||||||||||||||||||||||  ||||   ||       |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcat---ttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 42786804  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
       |||| |||||||||||||| ||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||    
T  42786805 catattttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttctt 42786883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 5800049 - 5800174
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||| |||||||||||||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgga----------ttttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||| |||||||||| |||||| |||||||||    
T  5800139 aagtctttaatgaaaagataagattttttgagattg 5800174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 9163064 - 9163238
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | |||||||| ||||||||||||||||||||||   ||| ||||||| |       |||| ||| |||||    
T  9163064 tcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaga---tttttcatcacataaaaaaagtcttgtgatattc 9163160  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaatttta 217  Q
    ||||||||||||||||| |||||||||||||||||||  |||| |||||||||||||| ||||| ||||| |||||||    
T  9163161 aaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaatttta 9163238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 240
Target Start/End: Complemental strand, 19741043 - 19740929
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||| |  ||||    
T  19741043 gtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaa 19740944  T
Q  226 aagtctttcatgaaa 240  Q
    |||||||||||||||    
T  19740943 aagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 260
Target Start/End: Original strand, 28483923 - 28484093
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||| ||||||||||||||||| ||   ||||||||       ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 28484019  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 260  Q
    |||||||          ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  28484020 tggattt----------tgtaggattttgtagtgtaattt-aacaagaaaaagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 25446070 - 25446227
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    ||||||||  ||||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| || |||||||||||    
T  25446070 ttaaaaaaattcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaat 25446166  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 232  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  25446167 aaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 37046670 - 37046457
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnn-gtctcgtggtatt 138  Q
    ||||||| ||||||||||||| | |||   | |||||||| || ||||||||||||||||||||||||    |||||||        |||| ||| ||||    
T  37046670 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactctta---atcacttaaaaaaaagtctagtgatatt 37046574  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtg-taattttaacaagaaaaagtctttcatg 237  Q
     ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||| ||||| |||||  ||||||| || ||||||||||||||||    
T  37046573 taaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatg 37046474  T
Q  238 aaaagatgagatttctt 254  Q
    |||| ||||||||||||    
T  37046473 aaaatatgagatttctt 37046457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 42 - 254
Target Start/End: Complemental strand, 39307469 - 39307260
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||| ||||| | | || ||||| |||||||||||||||||||||| ||||   ||||| ||       |||| ||||||||||     
T  39307469 ttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattctt---catcatttaaaaaaagtcttgtggtattcat 39307373  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| || |||| |||||| |||||  ||| |||| ||||||||||||||| ||||| |||||||||| |||||||| | | || ||||    
T  39307372 aatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaa 39307273  T
Q  242 gatgagatttctt 254  Q
     ||||||||||||    
T  39307272 catgagatttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 231
Target Start/End: Original strand, 28541686 - 28541874
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||| ||||||||||||||||||||||    |||||||       |||| |||||||||    
T  28541686 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 28541782  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 231  Q
    ||||||||||||||||| || |||||||||||||||  ||||| |||||||||||||| ||||| ||||| ||||||| || ||||||||||    
T  28541783 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 5441312 - 5441423
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  5441312 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 5441410  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  5441411 gactctttgtcat 5441423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 8711978 - 8712072
Alignment:
Q  167 ttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattg 8712072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 49835111 - 49835000
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  49835111 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 49835013  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  49835012 gactctttgtcat 49835000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  226 aagtct 231  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 46635828 - 46635655
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    |||||||       || | || ||||||||||||||||||||||| ||||||||||||||    
T  46635828 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtttaat 46635732  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||      |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  46635731 aaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctt 46635655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 261
Target Start/End: Complemental strand, 49501687 - 49501519
Alignment:
Q  82 tcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatt 181  Q
    ||||| ||||||||||||||||| ||   ||||||||       |||| |||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  49501687 tcttgaggtattcaatcaagactttt---catcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggatt 49501591  T
Q  182 tcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagatttcttgagattg 261  Q
    |          ||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  49501590 t----------tgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattg 49501519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 261
Target Start/End: Complemental strand, 49507752 - 49507584
Alignment:
Q  82 tcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatt 181  Q
    ||||| ||||||||||||||||| ||   ||||||||       |||| |||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  49507752 tcttgaggtattcaatcaagactttt---catcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggatt 49507656  T
Q  182 tcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagatttcttgagattg 261  Q
    |          ||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  49507655 t----------tgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattg 49507584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 260
Target Start/End: Complemental strand, 36479449 - 36479243
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||| ||| |||   | || ||||| |||||| |||||||||| ||||   ||| |||||||||       ||||||||||||||    
T  36479449 tcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaaga---tttttcatcacttaaaaaaagtctcgtggtattc 36479353  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||           ||||| ||||||| ||| ||||||||||| |||||    
T  36479352 aaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaa 36479264  T
Q  240 aagatgagatttcttgagatt 260  Q
    || ||||||||||||||||||    
T  36479263 aacatgagatttcttgagatt 36479243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 24736447 - 24736541
Alignment:
Q  167 ttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattg 24736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 27767964 - 27768075
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  27767964 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaa 27768062  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  27768063 gactctttgtcat 27768075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 37828696 - 37828589
Alignment:
Q  5 tgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||    
T  37828696 tgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagact 37828598  T
Q  105 ctttgtcat 113  Q
    |||||||||    
T  37828597 ctttgtcat 37828589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 54341052 - 54341163
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||    
T  54341052 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaatcaa 54341150  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  54341151 gactctttgtcat 54341163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 255
Target Start/End: Original strand, 12913212 - 12913414
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||| ||| |||||| |||   | || ||||| |||||| ||||||||||||||   |||| |||||| ||       ||||| ||||||||    
T  12913212 tcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaag---ctttttcatcatttaaaaaaagtctcatggtattc 12913308  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||||||          |||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  12913309 aaaatcattcaaattttgaaggattgtttaataaattgga----------ttttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaa 12913398  T
Q  240 aagatgagatttcttg 255  Q
     | |||||||||||||    
T  12913399 gacatgagatttcttg 12913414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37915693 - 37915803
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  37915693 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaa 37915791  T
Q  101 gactctttgtca 112  Q
    |||| |||||||    
T  37915792 gactttttgtca 37915803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 30967595 - 30967486
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||| ||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  30967595 tatgggattttaaaagattttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 30967497  T
Q  103 ctctttgtcat 113  Q
    |||||||||||    
T  30967496 ctctttgtcat 30967486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 50018322 - 50018447
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| ||||||||||| |||||||||||||  |||||||||||||||||||| ||||  ||||||          |||||||||||||||||||||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggat----------tttgtagtgtaattttaacaagaaa 50018411  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||| ||||||||||||||| |||||||||    
T  50018412 aagtctttcaagaaaagatgagatttattgagattg 50018447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 51320837 - 51320940
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       | ||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  51320837 attttaaaagactttttaattatgaaaaaatt-ttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactcttt 51320935  T
Q  109 gtcat 113  Q
    |||||    
T  51320936 gtcat 51320940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 28370995 - 28371093
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaa 224  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||| | || ||||||||||||||| ||||| |||||||| |||||    
T  28370995 gtctcatggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaagaagaa 28371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 54853758 - 54853655
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||||||||||||||||||||| |       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  54853758 attttaaaagactttttaattacgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactcttt 54853660  T
Q  109 gtcat 113  Q
     ||||    
T  54853659 ttcat 54853655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 49835031 - 49834833
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || || || | |||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  49835031 tcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 49834935  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||                    ||||||||||||||||||||||| ||||||||||| ||    
T  49834934 aaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaagaagtctttcattaa 49834855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 50018197 - 50018270
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  50018197 tcttgtggtattcaatcaagactttttacaatttaaaaaaagtcttatggtattcaatcaagactctttgtcat 50018270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 32684072 - 32684008
Alignment:
Q  197 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattg 32684008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 29649850 - 29649731
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaa 174  Q
    ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||||||||||||||||||| || ||||||||||||||    
T  29649850 aaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaa 29649754  T
Q  175 ttggatttcgatggattttgtgg 197  Q
    |||||||| ||||||||||||||    
T  29649753 ttggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 56445474 - 56445355
Alignment:
Q  132 tggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 231  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||          ||||||||||| ||||| || |||| |||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattt----------tgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  232 ttcatgaaaagatgagatttcttgagattg 261  Q
    ||||| || | |||||||||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattg 56445355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 31314867 - 31314749
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||          ||||||||||| ||||| ||||||| || ||||    
T  31314867 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt----------tgtgggattttctagtgaaattttagcatgaaa 31314778  T
Q  226 aagtctttcatgaaaagatgagatttctt 254  Q
    |||||||||||||||| ||||||||||||    
T  31314777 aagtctttcatgaaaacatgagatttctt 31314749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 5799888 - 5799996
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       | |||||||||| ||| |||||||||| |||||||||||| || |||||||||||||||||||    
T  5799888 tatgggattttaaaagactttttaattatgaaaag--ttttgtggtattaaattaagactttttgcaacttaaaaaaagttttgtggtattcaatcaaga 5799985  T
Q  103 ctctttgtcat 113  Q
    |||||||||||    
T  5799986 ctctttgtcat 5799996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 25504857 - 25504697
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | || |  | ||||||||  ||||||| ||||||||||||||||||    |||||||       |||  ||| |||||    
T  25504857 tcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactctta---atcacttaaaaaaagtccagtgatattc 25504761  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggatttt 203  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||    
T  25504760 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 29649965 - 29649854
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||| ||| |||||||| |||||||||||||  || ||    
T  29649965 tctatgagattttaaaagactttttaattatgaaaaagtt-ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattagattaa 29649867  T
Q  101 gactctttgtcat 113  Q
     ||||||||||||    
T  29649866 aactctttgtcat 29649854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 27454208 - 27454098
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||  || |||| ||||||||||  ||||| |||| ||||||||| ||||| ||||| ||||||  || |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  231 tttcatgaaaa 241  Q
    |||||||||||    
T  27454108 tttcatgaaaa 27454098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 53275859 - 53276025
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| ||||||| ||||||||||||||   ||| | |||||||       |||| ||| |||| ||||||||||||||||| ||||||||| ||||    
T  53275859 ttaaaaaaagtcttgtagtattcaatcaaga---tttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaat 53275955  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||  ||||| ||||||||||||| |||||| || |  ||||||| || ||||||||||||||| ||||    
T  53275956 aaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 9163026 - 9163095
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  9163026 gtggtattcaatcaagactctcaacaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcat 9163095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 23465026 - 23465119
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaac 219  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||||||  || || |||||||||||||||||||| ||||  |||||||||    
T  23465026 gtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaattttaac 23465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 24131097 - 24130988
Alignment:
Q  146 attcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagat 244  Q
    ||||||||||| || |||||||||||||||  ||||| |||||||||||||||||||| ||||| |||||||  | | ||||| ||||||||||||| ||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacat 24130998  T
Q  245 gagatttctt 254  Q
    ||||||||||    
T  24130997 gagatttctt 24130988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 20021259 - 20021363
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       |||||||||||| |||||||||| ||| ||| |||||||| || ||||||||||||||||||| ||||    
T  20021259 gattttaaaagactttttaattatgaaaaag-tcttgtggtatttaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagattctt 20021357  T
Q  108 tgtcat 113  Q
    ||||||    
T  20021358 tgtcat 20021363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 37915773 - 37915839
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactct 106  Q
    |||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||    
T  37915773 tcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactct 37915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 19741168 - 19741095
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  19741168 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 19741095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 24131232 - 24131159
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  24131232 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 24131159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 25331077 - 25331150
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  25331077 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 25331150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 28541644 - 28541717
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  28541644 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 28541717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 37046712 - 37046639
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  37046712 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 37046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 41320698 - 41320767
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  41320698 gtggtattcaatcaagactgtttccaatttaaaaaatgtcttgtgttattcaatcaagattctttgtcat 41320767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 32684123 - 32684067
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 32684067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 40537363 - 40537167
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||||| |||   | |||||||| |||||||||||||||||||| |||||   | |||||||            |||||||||    
T  40537363 tcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactct---taatcacttaaaaaat-----gtggtattc 40537272  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||| ||||||| || |||||||||||||||  ||||| |||||||||||||          ||| ||||||| || ||||||||||||||||||    
T  40537271 aaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttcatgaa 40537182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  146 attcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaac-aagaaaaagtctttcatgaaaagat 244  Q
    |||||||||| |||||||||||||||||||| ||||| | |||||||| ||||||||| || || ||||||||| || ||||| ||||||||||| | ||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  245 gagatttc 252  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 31314986 - 31314915
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||| |||| |||||||| ||||||||||    
T  31314986 ttgtggtattcaatcaagacttttttcaatttaaaaaaagtcttgtgttatttaatcaagattctttgtcat 31314915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32321999 - 32322110
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||| ||| ||||||||||||||||||||||       | ||||||||||||||||||| |||||  ||||||||||| ||| |||| |||| ||||||    
T  32321999 tctatcagaatttaaaagactttttaattatgaaaaagtt-ttgtggtattcaatcaagattttttgtaacttaaaaaaagtcatgtgatatttaatcaa 32322097  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  32322098 gactctttgtcat 32322110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46635941 - 46635829
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| |||||||||||||||||||| || |||       ||||||||||||||||||||||| ||| ||| ||||||||  ||||||  |||||||||||    
T  46635941 tctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaatcttgtattattcaatcaa 46635842  T
Q  101 gactctttgtcat 113  Q
    || ||||||||||    
T  46635841 gattctttgtcat 46635829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 41581923 - 41581796
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaag-aa 224  Q
    ||||||||||||| | | ||||||||||||  ||  ||||||||||||||||||||  |||  ||||||||||||||| ||||| |||||||||| | ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  225 aaagtctttcatgaaaagatgagatttctt 254  Q
    ||| | ||||||| ||| ||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 22201961 - 22202034
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  22201961 tcttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 22202034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28483891 - 28483985
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |  |||||||||| |||| |||||||||||    
T  28483891 tctatgagattttaaaagactttttaattatgaaaaag-tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaa 28483985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 32951096 - 32951023
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| | ||||||||    
T  32951096 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcat 32951023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 39479617 - 39479544
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| || |||||||    
T  39479617 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcat 39479544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 40537405 - 40537332
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| |||||| |||  || |||||||| |||||||| ||||||||||||||||||||||||    
T  40537405 tcttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagactctttgtcat 40537332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 41725071 - 41725144
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||| ||||| ||||||||||||  | ||||||||||||||||| ||||||||||||    
T  41725071 tcttgtgatattcaatcaagattttttgcaacttaaaaaaaatattgtggtattcaatcaatactctttgtcat 41725144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 41881343 - 41881270
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| || ||||| |||||||| ||||||||||||| ||||||||||    
T  41881343 tcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattctttgtcat 41881270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12913131 - 12913243
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaatca 99  Q
    |||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||||| |||| || || |||||| ||||||||||||| ||| |    
T  12913131 tctaagagattttaaaagattttttaattttgaaaaag-tcttgtggtattcaatcaagactctttataatttaaaaaaaagtcttgtggtatttaatta 12913229  T
Q  100 agactctttgtcat 113  Q
    ||||||||||||||    
T  12913230 agactctttgtcat 12913243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 25504899 - 25504832
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||    
T  25504899 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctt 25504832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 1044756 - 1044828
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| || |||||||    
T  1044756 tcttgtggtattcaatcaagactctttccaatttaaaaaa-gtcttgtgttattcaatcaagattccttgtcat 1044828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 34228842 - 34228770
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||| |||| ||||||||||||| ||||||||||    
T  34228842 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc-tgtgttattcaatcaagattctttgtcat 34228770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 11090337 - 11090401
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    ||||||||||||||||||||| | ||| | |||||||||| || |||||||||||||||||||||    
T  11090337 tcttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagact 11090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 55302794 - 55302862
Alignment:
Q  45 tggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||| ||| ||| |||||||| |||||||| | ||||||||||| ||||||||||    
T  55302794 tggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtttttcaatcaagattctttgtcat 55302862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 7250033 - 7249959
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| || |||||| |||||||| ||||||||||||| |||| |||||    
T  7250033 tcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattcttagtcat 7249959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 36728023 - 36727950
Alignment:
Q  187 ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| | | ||||||||| |||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattg 36727950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 23464901 - 23464974
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| |||  ||||||| |||||||  ||||||||||||| || |||||||    
T  23464901 tcttgtggtattcaatcaagactctttccaatataaaaaaagtcttgtattattcaatcaagattccttgtcat 23464974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 7007321 - 7007393
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||| ||| ||| || |||||| |||||||| ||||||||||||| ||| ||||||    
T  7007321 ttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattctctgtcat 7007393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 11090435 - 11090503
Alignment:
Q  186 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    |||||||||||||||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttctt 11090503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 29649843 - 29649787
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  29649843 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 29649787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 49501687 - 49501631
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||||||||||||| ||||||    
T  49501687 tcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaa 49501631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 49501811 - 49501698
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatc-aagactttttacaacttaaaaaat-gtcttgtggtattcaatc 98  Q
    |||||| |||||||||||| ||||||||||||       |||||||||||| |||| ||||||||||  || ||||||||  ||||||  ||||||||||    
T  49501811 tctatgggattttaaaagattttttaattatgaaaaag-tcttgtggtattgaatctaagactttttgtaatttaaaaaaaagtcttgcagtattcaatc 49501713  T
Q  99 aagactctttgtcat 113  Q
    |||||||||||||||    
T  49501712 aagactctttgtcat 49501698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 49507752 - 49507696
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||||||||||||| ||||||    
T  49507752 tcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaa 49507696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 49507876 - 49507763
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatc-aagactttttacaacttaaaaaat-gtcttgtggtattcaatc 98  Q
    |||||| |||||||||||| ||||||||||||       |||||||||||| |||| ||||||||||  || ||||||||  ||||||  ||||||||||    
T  49507876 tctatgggattttaaaagattttttaattatgaaaaag-tcttgtggtattgaatctaagactttttgtaatttaaaaaaaagtcttgcagtattcaatc 49507778  T
Q  99 aagactctttgtcat 113  Q
    |||||||||||||||    
T  49507777 aagactctttgtcat 49507763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 51320951 - 51321007
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  51320951 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 51321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 24131190 - 24131123
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    
T  24131190 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 24131123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 1112839 - 1112912
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||||| ||| | | |||||||| || ||||  ||||||||||||| ||||||||||    
T  1112839 tcttgtgttattcaatcaagactctttccgatttaaaaaaagtattgtattattcaatcaagattctttgtcat 1112912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 1044837 - 1044893
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  1044837 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1044893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 1112923 - 1112979
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  1112923 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1112979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 24131148 - 24131092
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  24131148 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 24131092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 25446080 - 25446136
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  25446080 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 25446136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 41320798 - 41320834
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||||||| ||||||||||||||||||||||||||||    
T  41320798 ttaaaaaaagtcttgtggtattcaatcaagactcttt 41320834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 3328656 - 3328698
Alignment:
Q  48 tattcaatcaagactttttacaacttaaaaaatgtcttgtggta 91  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  3328656 tattcaatcaagactttttacaatttaaaaaat-tcttgtggta 3328698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 3436539 - 3436610
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtc 111  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||  | ||||| ||||||||||||| | ||||||    
T  3436539 tcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaagattttttgtc 3436610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 39479543 - 39479508
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||| |||||||||||||||||||||||||||    
T  39479543 ttaaaaaaagtcttgtggtattcaatcaagactctt 39479508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 19741081 - 19741031
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtatt 93  Q
    ||||||||||| ||||||||||| |  |||||||||| |||||||||||||    
T  19741081 tgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtatt 19741031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 30009930 - 30009864
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| ||| ||| |||||||| |||||||| |||| |||||| | ||||| ||||    
T  30009930 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttatttaatcaaaattctttatcat 30009864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 44646745 - 44646842
Alignment:
Q  6 gagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttt-tacaacttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    ||||||||||||||||||||||| ||        |||||||||||||||||||||||||| || ||| |||| ||  |||| ||||||||||||||||||    
T  44646745 gagattttaaaagactttttaatgat-aaaaaaatcttgtggtattcaatcaagacttttataaaacataaataa-atcttatggtattcaatcaagact 44646842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 49469267 - 49469329
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||||||||||| |||||||||| ||| ||| |||| ||| |||||||| |||||||| ||||    
T  49469267 tcttgtggtatttaatcaagactctttccaatttaagaaaagtcttgtgttattcaattaaga 49469329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 7007407 - 7007460
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  7007407 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7007460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 12112899 - 12112964
Alignment:
Q  49 attcaatcaagactttttacaacttaaaaaat-gtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||| |||  || ||||||||  |||||||| ||||||||||||| ||||||||||    
T  12112899 attcaatcaagactctttcaaatttaaaaaaaagtcttgtgttattcaatcaagattctttgtcat 12112964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 30009850 - 30009797
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  30009850 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 30009797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 34141662 - 34141633
Alignment:
Q  3 tatgagattttaaaagactttttaattatg 32  Q
    ||||||||||||||||||||||||||||||    
T  34141662 tatgagattttaaaagactttttaattatg 34141633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #127
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 36479455 - 36479418
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  36479455 aaaaagtcttgtggtattcaatcaaaactctttgtcat 36479418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #128
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 37046719 - 37046686
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||| ||||||||||||||||||||||||||||    
T  37046719 aaaaaagtcttgtggtattcaatcaagactcttt 37046686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #129
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 39479624 - 39479591
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||| ||||||||||||||||||||||||||||    
T  39479624 aaaaaagtcttgtggtattcaatcaagactcttt 39479591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #130
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 44771078 - 44771041
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  44771078 aaaaagtcttgtgatattcaatcaagactctttgtcat 44771041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #131
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 55302876 - 55302929
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  55302876 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 55302929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #132
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 1044750 - 1044782
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  1044750 aaaaagtcttgtggtattcaatcaagactcttt 1044782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #133
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 23464895 - 23464927
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  23464895 aaaaagtcttgtggtattcaatcaagactcttt 23464927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #134
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 24131238 - 24131206
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  24131238 aaaaagtcttgtggtattcaatcaagactcttt 24131206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #135
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 24736384 - 24736416
Alignment:
Q  77 aaatgtcttgtggtattcaatcaagactctttg 109  Q
    |||||||||||| ||||||||||||||||||||    
T  24736384 aaatgtcttgtgatattcaatcaagactctttg 24736416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #136
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 25331071 - 25331103
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  25331071 aaaaagtcttgtggtattcaatcaagactcttt 25331103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #137
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 25504905 - 25504873
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  25504905 aaaaagtcttgtggtattcaatcaagactcttt 25504873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #138
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 28541638 - 28541670
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  28541638 aaaaagtcttgtggtattcaatcaagactcttt 28541670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #139
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 32322121 - 32322177
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||||||||||||||| |||| |  |||||||||  ||||||||||||||||    
T  32322121 tcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaa 32322177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #140
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 32951102 - 32951070
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  32951102 aaaaagtcttgtggtattcaatcaagactcttt 32951070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #141
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 34228848 - 34228816
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  34228848 aaaaagtcttgtggtattcaatcaagactcttt 34228816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #142
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 38230833 - 38230892
Alignment:
Q  44 gtggtattcaatcaagactttt-tacaacttaaaaaatgtcttgtggtattcaatcaagac 103  Q
    |||||||||||||||||||||| || || ||||| ||  ||||||||||||||||||||||    
T  38230833 gtggtattcaatcaagacttttataaaatttaaacaa-atcttgtggtattcaatcaagac 38230892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #143
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 41881349 - 41881317
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  41881349 aaaaagtcttgtggtattcaatcaagactcttt 41881317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #144
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 42786714 - 42786770
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  | |||||||| |||| |||||||||||    
T  42786714 tcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaa 42786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 108)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 25612139 - 25612357
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||||   ||| |||||| ||       |||| |||||||||    
T  25612139 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga---tttttcatcatttaaaaaaagtcttgtggtattc 25612235  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25612236 aaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaa 25612335  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  25612336 aagatgagatttcttgagattg 25612357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 29396606 - 29396388
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||| |||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  29396606 tcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 29396510  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396509 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 29396410  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  29396409 aagatgagatttcttgagattg 29396388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 51701562 - 51701780
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  51701562 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 51701658  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51701659 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 51701758  T
Q  240 aagatgagatttcttgagattg 261  Q
    |||||||||||| |||||||||    
T  51701759 aagatgagattttttgagattg 51701780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 6312558 - 6312774
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    |||||||||||||| |||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||||    
T  6312558 ttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattcaa 6312654  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312655 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 6312754  T
Q  242 gatgagatttcttgagattg 261  Q
    ||||||||||||||||||||    
T  6312755 gatgagatttcttgagattg 6312774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 15835271 - 15835053
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||||||   | |||||| ||        ||| |||||||||    
T  15835271 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact---tctcatcatttaaaaaaaatcttgtggtattc 15835175  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15835174 aaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 15835075  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  15835074 aagatgagatttcttgagattg 15835053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 48177680 - 48177462
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||| ||| |||   | || ||||| |||||| ||||||||||||| |   ||| |||||||||       |||| |||||||||    
T  48177680 tcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaa---tttttcatcacttaaaaaaagtcttgtggtattc 48177584  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177583 aaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 48177484  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  48177483 aagatgagatttcttgagattg 48177462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 253
Target Start/End: Original strand, 46328024 - 46328234
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       ||||||||||||||    
T  46328024 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttacaaaaagtctcgtggtattc 46328120  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46328121 aaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaa 46328220  T
Q  240 aagatgagatttct 253  Q
    ||||| ||||||||    
T  46328221 aagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 9322716 - 9322500
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| ||||||| ||||||||| ||   ||||| ||       |||  |||||||||||    
T  9322716 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagactttt---catcatttaaaaaaagtcctgtggtattcaa 9322620  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||  |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9322619 aatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 9322520  T
Q  242 gatgagatttcttgagattg 261  Q
    ||||||||||||||||||||    
T  9322519 gatgagatttcttgagattg 9322500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 28387523 - 28387393
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  28387523 gtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtc 28387424  T
Q  231 tttcatgaaaagatgagatttcttgagattg 261  Q
    |||||| ||||||||||||||||||||||||    
T  28387423 tttcataaaaagatgagatttcttgagattg 28387393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 21222131 - 21222340
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| | |||||||||    
T  21222131 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagaggtattcaa 21222227  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  21222228 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaa 21222327  T
Q  242 gatgagatttctt 254  Q
     ||||||||||||    
T  21222328 catgagatttctt 21222340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 19452026 - 19451815
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||||||||| |||||||||||||    |||||||       |||| |||||||||    
T  19452026 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactctta---atcacttaaaaaaagtctagtggtattc 19451930  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||||| |||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  19451929 aaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 19451830  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  19451829 aacatgagatttctt 19451815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 38536307 - 38536099
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| || ||| ||||||||||||||||| ||   ||| ||||       |||| |||||||||    
T  38536307 tcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagactttt---cattacttaacaaaagtcttgtggtattc 38536211  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  38536210 aaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaa 38536121  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  38536120 aagatgagatttcttgagattg 38536099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 38558525 - 38558317
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| || ||| ||||||||||||||||| ||   ||| ||||       |||| |||||||||    
T  38558525 tcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagactttt---cattacttaacaaaagtcttgtggtattc 38558429  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  38558428 aaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaa 38558339  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  38558338 aagatgagatttcttgagattg 38558317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 35279655 - 35279865
Alignment:
Q  41 cttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattca 140  Q
    |||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||| ||    |||||||       |||| ||||||||||    
T  35279655 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactatta---atcacttaaaaaaagtctagtggtattca 35279751  T
Q  141 aaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 240  Q
    |||||||| ||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||    
T  35279752 aaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaa 35279851  T
Q  241 agatgagatttctt 254  Q
    | ||||||||||||    
T  35279852 acatgagatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 72 - 261
Target Start/End: Original strand, 47780725 - 47780911
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| ||| |||||||||||||||||||||||    |||||||       |||| ||| |||||||||||||||||| || |||||||||||||||    
T  47780725 ttaaaaaaagtcatgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaat 47780821  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||  ||||| |||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| |||||||||||| ||||||    
T  47780822 aaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattg 47780911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 45760228 - 45760016
Alignment:
Q  40 tcttgtggtattcaatcaagacttttta-caacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    ||||||| ||||||||||||| | |||  ||| |||||||| ||| |||||||||||||||||||||||    |||||||       |||| ||||||||    
T  45760228 tcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtatt 45760132  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||| ||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||| ||| ||||    
T  45760131 caaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatga 45760032  T
Q  239 aaagatgagatttctt 254  Q
    ||| ||||||||||||    
T  45760031 aaacatgagatttctt 45760016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 28824590 - 28824380
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  28824590 tcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaacagtcttgtggtattc 28824494  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||| ||||||||||||||  ||||| |||||||||||||||||||| ||| | |||||||||| |||||||||||| || ||    
T  28824493 aaaatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaa 28824395  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  28824394 aacatgagatttctt 28824380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 35679346 - 35679128
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||| | |||   | ||||||||  |||||| |||||||||||||||||||    |||||||       |||  |||||||||    
T  35679346 tcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactctta---atcacttaaaaaaagtcatgtggtattc 35679250  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||  ||||||||| ||||| ||||||| || ||||||||||||||||||    
T  35679249 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 35679150  T
Q  240 aagatgagatttcttgagattg 261  Q
     | |||||||||||| ||||||    
T  35679149 gacatgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 250
Target Start/End: Complemental strand, 5495314 - 5495117
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||||||| |||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       ||||||||||||||    
T  5495314 tcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtctcgtggtattc 5495218  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||| ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||||| || |||||    
T  5495217 aaaatcatttaaatttcaaaggattatttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaa 5495128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 6304387 - 6304259
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||    
T  6304387 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6304288  T
Q  226 aagtctttcatgaaaagatgagatttctt 254  Q
    |||||||||||||||| |||| |||||||    
T  6304287 aagtctttcatgaaaacatgaaatttctt 6304259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 251
Target Start/End: Complemental strand, 32589171 - 32588963
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||| |||||||||||||||||| ||||  | | || ||   |||||||| |||||||||||||||||   ||||||||       |||| |||||||||    
T  32589171 tcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactctt---catcacttaaaagaagtcttgtggtattc 32589075  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||| |||||| ||||| ||||||| ||  |||||||||||||||||    
T  32589074 aaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaa 32588975  T
Q  240 aagatgagattt 251  Q
    || |||||||||    
T  32588974 aacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 49418149 - 49418277
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| || || ||||||| || ||||    
T  49418149 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaa 49418248  T
Q  226 aagtctttcatgaaaagatgagatttctt 254  Q
    || ||||||||||||| ||||||||||||    
T  49418249 aaatctttcatgaaaatatgagatttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 29219270 - 29219476
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| | | ||  |||||||| |||||| | ||||||||||||||| ||   ||||||||       |||| |||||||||    
T  29219270 tcttgtggtattcaatcaagactctgt-cattttaaaaaa-gtcttgagatattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 29219364  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||   ||||||||||||||||||||||||| |||||||          ||||||||||||||||||||||||||||| |||||||||    
T  29219365 aaaatcattcaaattaagaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtatttcatgaa 29219454  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  29219455 aagatgagatttcttgagattg 29219476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 49198399 - 49198276
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||    
T  49198399 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 49198300  T
Q  231 tttcatgaaaagatgagatttctt 254  Q
    ||||||||||| |||| |||||||    
T  49198299 tttcatgaaaacatgatatttctt 49198276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 75 - 251
Target Start/End: Complemental strand, 50192734 - 50192560
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnn-gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataa 173  Q
    ||||| |||||||||||||||||||||||||||    |||||||        |||| |||||||||||||||||||||||||  ||||||||||||||||    
T  50192734 aaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataa 50192638  T
Q  174 attggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 251  Q
    ||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  50192637 atcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 50192560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 9577567 - 9577432
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||| ||||| |||||||  | ||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    || ||||||||||||| ||||||||||||| |||||    
T  9577467 aaatctttcatgaaaacatgagatttcttgggattg 9577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 18798393 - 18798504
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  18798393 tctatgagattttaaaagactttttaattatgaaaatg-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 18798491  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  18798492 gactctttgtcat 18798504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 37014858 - 37014640
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    |||||||||||||||| |||||| |||   | ||| || | |||||||||||||||||||| | ||||   ||||||||       |||| ||| |||||    
T  37014858 tcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattctt---catcacttaaaaaaagtcttgtgatattc 37014762  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || |||||||| |||||||| |||| |||||||||||| ||||||| ||||| ||||||| || |||||||||| |||| ||    
T  37014761 aaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaa 37014662  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||| ||||||    
T  37014661 aacatgagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 31572327 - 31572204
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| |||||||  | |||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  231 tttcatgaaaagatgagatttctt 254  Q
    ||||||||||  ||||||||||||    
T  31572227 tttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 126 - 241
Target Start/End: Original strand, 45536009 - 45536124
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||    
T  45536009 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 45536108  T
Q  226 aagtctttcatgaaaa 241  Q
    ||||||||||||||||    
T  45536109 aagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 47654486 - 47654358
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  ||||| |||||||||||||| ||||| ||| | ||||||| || ||||    
T  47654486 gtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaa 47654387  T
Q  226 aagtctttcatgaaaagatgagatttctt 254  Q
    |||| ||||||||||| ||||||||||||    
T  47654386 aagtatttcatgaaaacatgagatttctt 47654358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 130 - 261
Target Start/End: Complemental strand, 48668906 - 48668785
Alignment:
Q  130 cgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 229  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||    
T  48668906 cgtggtattcaaaattattcaaatttcgaaagattgtttaataaattggattt----------tgtgggattctgtagtgtaattttaacaagaaaaagt 48668817  T
Q  230 ctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||| ||| |||||    
T  48668816 ctttcatgaaaagatgagatttgttgggattg 48668785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8141426 - 8141315
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||    
T  8141426 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaa 8141328  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  8141327 gactctttgtcat 8141315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15835351 - 15835240
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  15835351 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 15835253  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  15835252 gactctttgtcat 15835240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25612059 - 25612170
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  25612059 tctatgggattttaaaagactttttaattatgaaaaaa-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 25612157  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  25612158 gactctttgtcat 25612170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 18798473 - 18798671
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  18798473 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 18798569  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||    
T  18798570 aaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaagtctttcatgaa 18798649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 47784369 - 47784507
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||    ||       |||| |||||||||    
T  47784369 tcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtca----tttaaaaaagtcttgtggtattc 47784464  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    ||||| ||||||| ||| || ||||||||||||||||||||||    
T  47784465 aaaattattcaaacttctaaagattgtttaataaattggattt 47784507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 46327944 - 46328055
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  46327944 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtgttattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 46328042  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  46328043 gactctttgtcat 46328055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 29556118 - 29556298
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||| ||||||||||||||||||    |||||||        ||| ||| |||||||||||||||||||||| || |||||||||||    
T  29556118 ttaaaaaaagtcttgtgttattcaatcaagactctta---atcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaat 29556214  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa-agatgagatttctt 254  Q
    ||||| ||||| |||||||||| ||||||||| || || ||||||| |  |||||||||||| |||||| | ||||||||||||    
T  29556215 aaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttctt 29556298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 49230790 - 49230899
Alignment:
Q  3 tatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    |||| |||||||||||||||||||||||||       || |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  49230790 tatgggattttaaaagactttttaattatgaaaaag-tcatgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaaga 49230888  T
Q  103 ctctttgtcat 113  Q
    |||||||||||    
T  49230889 ctctttgtcat 49230899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 29219198 - 29219294
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactct 106  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  29219198 attttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactct 29219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6312476 - 6312587
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| || |||||||||||||| ||    
T  6312476 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaattaa 6312574  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  6312575 gactctttgtcat 6312587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 48524301 - 48524490
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| |||||   | ||||||||  || ||||||||| |||||| ||||||    |||||||       |||| ||| |||||    
T  48524301 tcttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactctta---atcacttaaaaaaagtcttgtgatattc 48524397  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 232  Q
    ||||||||||||||||  || |||||||||||||||  | ||| |||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  48524398 aaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 730130 - 730314
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnn-gtctcgtggtatt 138  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||        |||| ||||||||    
T  730130 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaagtctagtggtatt 730226  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaa 226  Q
    |||||||||||||||||| | | ||||||||||||||  ||||| ||||||||||||| |||||| ||||| ||||||| || |||||    
T  730227 caaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 45272652 - 45272775
Alignment:
Q  127 tctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaa 226  Q
    |||||||||||||||||| ||| ||||||| |||||| |||||||||||||||          ||||||| |||||||||||||||||||||||||||||    
T  45272652 tctcgtggtattcaaaattatttaaatttcgaaggat-gtttaataaattgga----------ttttgtgagattttgtagtgtaattttaacaagaaaa 45272740  T
Q  227 agtctttcatgaaaagatgagatttcttgagattg 261  Q
    | ||||| || |||||||||||||| |||||||||    
T  45272741 aatcttttataaaaagatgagattttttgagattg 45272775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 49230868 - 49231007
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  49230868 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 49230964  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    ||||||||||||||||| ||||||| |||||||||||||||||    
T  49230965 aaaatcattcaaatttcgaaggattatttaataaattggattt 49231007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5495394 - 5495283
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||| ||||||||||||||       || |||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||    
T  5495394 tctatgagattttaaaaaactttttaattatgaaaaag-tcatgtggtattcaatcaagactttttgcaacttaaaggaagtcttgtggtattcaattaa 5495296  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  5495295 gactctttgtcat 5495283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9322798 - 9322687
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| ||||||||    |||||||||||||||||    
T  9322798 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaaaatttgtggtattcaatcaa 9322700  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  9322699 gactctttgtcat 9322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28387691 - 28387580
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       |||| |||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||    
T  28387691 tctatgggattttaaaagactttttaattatgaaaaag-tcttatggtattcaatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaa 28387593  T
Q  101 gactctttgtcat 113  Q
    || ||||||||||    
T  28387592 gattctttgtcat 28387580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 29396678 - 29396575
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| ||||||||  |||| ||||||||||||||||||||||    
T  29396678 attttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttttggtattcaatcaagactcttt 29396580  T
Q  109 gtcat 113  Q
    |||||    
T  29396579 gtcat 29396575  T

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Target: chr1; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 48177722 - 48177649
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  48177722 tcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcat 48177649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 51701522 - 51701593
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||    
T  51701522 ttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtcat 51701593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 45272489 - 45272600
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       | |||||||||||||| |||||||||| ||||||||||||  |||||| ||||||||||||    
T  45272489 tctatgggattttaaaagactttttaattatgaaaaaa-tattgtggtattcaataaagactttttgcaacttaaaaaaaatcttgttgtattcaatcaa 45272587  T
Q  101 gactctttgtcat 113  Q
     ||||||||||||    
T  45272588 aactctttgtcat 45272600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 19452110 - 19452042
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||    
T  19452110 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagactcttt 19452042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 730088 - 730161
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  730088 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 730161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 953759 - 953832
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  953759 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 953832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 14494149 - 14494222
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  14494149 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 14494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 19452068 - 19451995
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  19452068 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 19451995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 35679388 - 35679315
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||| || ||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  35679388 tcttgtggtattcaatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaagattctttgtcat 35679315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 9577723 - 9577619
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||||||||||||||||| |||       | ||||||||||||||||||||| ||| |||||||||||| || |||| ||||||||||||||| |||    
T  9577723 gattttaaaagactttttaatgatgaaaaagtt-ttgtggtattcaatcaagactatttgcaacttaaaaaaagtattgttgtattcaatcaagaccctt 9577625  T
Q  108 tgtcat 113  Q
    ||||||    
T  9577624 tgtcat 9577619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 51085860 - 51085952
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaa 218  Q
    ||||||||||||||||||| ||||||||||  ||||||| || |||||||||||||| |||| ||||||||| ||||| | ||| ||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaa 51085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35279574 - 35279685
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| |||||||||||||||||||| || |||       ||||||||||||||||||||||| ||| ||| |||||||| | |||||| |||||||||||    
T  35279574 tctaagagattttaaaagacttttttatcatgaaaaag-tcttgtggtattcaatcaagactctttccaatttaaaaaaagacttgtgttattcaatcaa 35279672  T
Q  101 gactctttgtcat 113  Q
    || ||||||||||    
T  35279673 gattctttgtcat 35279685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 22183310 - 22183383
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||||| ||||||||||    
T  22183310 tcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcat 22183383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 49198527 - 49198455
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  49198527 tcttgtggtattcaatcaagactcttttcaatttaaaaaa-gtcttgtgttattcaatcaagattctttgtcat 49198455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 45760270 - 45760198
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtca 112  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| |||||||| ||||||||||||| |||||||||    
T  45760270 tcttgtggtattcaatcaaaactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtca 45760198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 21222088 - 21222160
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||||| ||||||||||    
T  21222088 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagt-ttgtgttattcaatcaagattctttgtcat 21222160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 28824632 - 28824559
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| |||  || |||||||| |||||||| ||||||||||||| | ||||||||    
T  28824632 tcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcat 28824559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 33025578 - 33025696
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||  ||||          |||||||||||| || |  ||||||| || ||||    
T  33025578 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagatt----------ttgtgggattttctaataaaattttagcatgaaa 33025667  T
Q  226 aagtctttcatgaaaagatgagatttctt 254  Q
    |||||||||||||||| ||||||||||||    
T  33025668 aagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 31622586 - 31622538
Alignment:
Q  134 gtattcaaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattt 31622538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 51085704 - 51085768
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactct 106  Q
    ||||||||||||||||||||| ||| |||| ||||||| || |||||||||||||| ||||||||    
T  51085704 ttgtggtattcaatcaagactctttgcaacataaaaaaagttttgtggtattcaataaagactct 51085768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  134 gtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggatttt 193  Q
    ||||||||||||||||||||||| |||| |||||||||||||  ||||| ||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 45535886 - 45535957
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||| ||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||| | ||||||||||    
T  45535886 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattctttgtcat 45535957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 47654613 - 47654539
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtc-ttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||| ||||||||| ||| ||| |||||||| ||| ||||| ||||||||||||| ||||||||||    
T  47654613 tcttgtggtattcgatcaagactctttccaatttaaaaaaagtctttgtgttattcaatcaagattctttgtcat 47654539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 48524266 - 48524332
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| | ||||||||    
T  48524266 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttttgtcat 48524332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 50192841 - 50192738
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||| ||||||       ||||||||||||||||||||| | ||| ||| ||||||||  ||||||| ||||||||||||| || ||    
T  50192841 attttaaaagacttttttattatgaaaaag-tcttgtggtattcaatcaagattctttccaatttaaaaaaaatcttgtgttattcaatcaagattcctt 50192743  T
Q  109 gtcat 113  Q
    |||||    
T  50192742 gtcat 50192738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 29556046 - 29556106
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    ||||||||||||||||||||| ||| ||| |||||||| |||||||| |||||||| ||||    
T  29556046 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaaga 29556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 32589207 - 32589140
Alignment:
Q  47 gtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| ||| |||||| ||||||  |||| |||||||||||||||||||||| ||||    
T  32589207 gtattcaatcaagactcttttcaactttaaaaaaaatcttctggtattcaatcaagactctttatcat 32589140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 6304514 - 6304440
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| || |||||| ||  |||| ||||||||||||| ||||||||||    
T  6304514 tcttgtggtattcaatcaagactatttccaatttaaaaaaaagtactgtgttattcaatcaagattctttgtcat 6304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 38536314 - 38536276
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  38536314 aaaaaagtcttgtggtattcaatcaagactctttgtcat 38536276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 38558532 - 38558494
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  38558532 aaaaaagtcttgtggtattcaatcaagactctttgtcat 38558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 49418027 - 49418097
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||| ||||||||||||||| ||| ||| ||| |||| |||||||| ||||||||||||| || |||||||    
T  49418027 tgtgatattcaatcaagactctttccaatttagaaaaagtcttgtgttattcaatcaagattcattgtcat 49418097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 38320006 - 38320098
Alignment:
Q  161 gattgtttaataaattggatttcgatggattttgt-gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 253  Q
    ||||||||| ||||| |||||| ||| |||||||| ||| |||| ||||| ||||||| ||  ||||||||||||||||||| |||| ||||||    
T  38320006 gattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatatttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 6312598 - 6312654
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  | |||||||| ||||||||||||||||    
T  6312598 tcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 6312654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 9191286 - 9191338
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||| || |||||||||||||| |||||  ||||||||||    
T  9191286 gtggtattcaatcaagatttattacaacttaaaaattgtctcttggtattcaa 9191338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 35279696 - 35279752
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  35279696 tcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaa 35279752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 953801 - 953868
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||| ||||||||||||    
T  953801 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactctt 953868  T

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Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 47780604 - 47780676
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaat----gtcttgtggtattcaatcaagactcttt 108  Q
    ||||||| ||||||||||||||| ||| ||| ||||||||     |||||||| |||||||||||||||||||    
T  47780604 tcttgtgttattcaatcaagactcttttcaatttaaaaaaaaaaagtcttgtgttattcaatcaagactcttt 47780676  T

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Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 47780650 - 47780713
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaatcaaga 102  Q
    ||||||| ||||||||||||||| ||| ||| || |||||| |||||||| |||||||||||||    
T  47780650 tcttgtgttattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaaga 47780713  T

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Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 8141344 - 8141282
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||||||    
T  8141344 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 8141282  T

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Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 37014885 - 37014827
Alignment:
Q  55 tcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||| | ||| ||| |||||||  ||||||||||||||||| |||||||||||||||    
T  37014885 tcaagaatctttgcaatttaaaaagagtcttgtggtattcaattaagactctttgtcat 37014827  T

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Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 44290173 - 44290111
Alignment:
Q  51 tcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||| | ||| ||| |||||||| |||||||  |||||||| |||||||||||||||    
T  44290173 tcaatcaagattcttttcaatttaaaaaaagtcttgtaatattcaataaagactctttgtcat 44290111  T

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Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 22183354 - 22183419
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||| ||||    
T  22183354 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattctt 22183419  T

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Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 33025452 - 33025521
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttg 109  Q
    ||||||||||||||||||| |  |||| ||| |||||||| || ||||  ||||||||||||| ||||||    
T  33025452 tcttgtggtattcaatcaaaaaattttccaatttaaaaaaagttttgtcttattcaatcaagattctttg 33025521  T

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Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 48669000 - 48668959
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||| || ||||| ||||||||||||||||||||||||    
T  48669000 ttaaaaaacgttttgtgatattcaatcaagactctttgtcat 48668959  T

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Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 730082 - 730114
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  730082 aaaaagtcttgtggtattcaatcaagactcttt 730114  T

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Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 953753 - 953785
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  953753 aaaaagtcttgtggtattcaatcaagactcttt 953785  T

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Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 8141304 - 8141248
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||||||||||||||||| || |  |||||||||| |||||| |||||||||    
T  8141304 tcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattcaa 8141248  T

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Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 19452116 - 19452084
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  19452116 aaaaagtcttgtggtattcaatcaagactcttt 19452084  T

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Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 21222082 - 21222114
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  21222082 aaaaagtcttgtggtattcaatcaagactcttt 21222114  T

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Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 21222171 - 21222227
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| | |||||||||    
T  21222171 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaa 21222227  T

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Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 22183304 - 22183336
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  22183304 aaaaagtcttgtggtattcaatcaagactcttt 22183336  T

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Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 22183394 - 22183450
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||| | || |  |||||||||| |||| |||||||||||    
T  22183394 tcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaa 22183450  T

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Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 28387569 - 28387513
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  | ||||||||  |||||||||||||||    
T  28387569 tcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaa 28387513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 28824638 - 28824606
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  28824638 aaaaagtcttgtggtattcaatcaagactcttt 28824606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 31572423 - 31572355
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaat-gtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||| |||| |||| || ||| ||||||||  ||||||||||||| ||| |||||||||    
T  31572423 tcttgtggtattcattcaaaacttcttccaatttaaaaaaaagtcttgtggtatttaattaagactctt 31572355  T

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Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 45272610 - 45272666
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  ||||||||||  ||| |||||||||||    
T  45272610 tcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaa 45272666  T

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Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 47780553 - 47780585
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  47780553 aaaaagtcttgtggtattcaatcaagactcttt 47780585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 49198533 - 49198501
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  49198533 aaaaagtcttgtggtattcaatcaagactcttt 49198501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 33135615 - 33135830
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       ||||||||||||||||    
T  33135615 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtctcgtggtattcaa 33135711  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33135712 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaa 33135810  T
Q  242 gatgagatttcttgagattg 261  Q
     |||||||||||||||||||    
T  33135811 aatgagatttcttgagattg 33135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 28844545 - 28844763
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  28844545 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 28844641  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||    
T  28844642 aaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaa 28844741  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  28844742 aagatgagatttcttgagattg 28844763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 10657396 - 10657614
Alignment:
Q  40 tcttgtggtattcaatcaaga-ctttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    ||||||||||||||||||||| | |||  ||  |||||||| || ||| ||||||||||||||||| ||   ||||||||       |||| ||||||||    
T  10657396 tcttgtggtattcaatcaagatcctttgtcattttaaaaaa-gttttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtatt 10657491  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10657492 caaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatga 10657591  T
Q  239 aaagatgagatttcttgagattg 261  Q
    |||||||| ||||||||||||||    
T  10657592 aaagatgaaatttcttgagattg 10657614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 43 - 261
Target Start/End: Original strand, 25288152 - 25288367
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaa 142  Q
    |||||||||||||||||||| |||   | || ||||| |||||| |||||||| |||||||| ||   ||||||||        ||| ||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagactttt---catcacttaaaaaaaatcttgtggtattcaaa 25288248  T
Q  143 atcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 242  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  25288249 atcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaag 25288348  T
Q  243 atgagatttcttgagattg 261  Q
    |||||||||||||||||||    
T  25288349 atgagatttcttgagattg 25288367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 18177345 - 18177475
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18177444  T
Q  231 tttcatgaaaagatgagatttcttgagattg 261  Q
    ||| || ||||||||||||||||||||||||    
T  18177445 tttaataaaaagatgagatttcttgagattg 18177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 26788774 - 26788991
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||  ||||  |         |||| |||||||||    
T  26788774 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatt-caaaaaaaaagtcttgtggtattc 26788872  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  26788873 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat--- 26788969  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  26788970 aagatgagatttcttgagattg 26788991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 16269681 - 16269892
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  16269681 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 16269777  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  16269778 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaa 16269877  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  16269878 aacatgagatttctt 16269892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 24776345 - 24776556
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  24776345 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 24776441  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  24776442 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 24776541  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  24776542 aacatgagatttctt 24776556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 31170844 - 31170633
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  31170844 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 31170748  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  31170747 aaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 31170648  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  31170647 aacatgagatttctt 31170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 378896 - 379135
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||    
T  378896 gattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttt 378994  T
Q  108 tgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtag 207  Q
    | ||||   ||       || || ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||           ||||||||||    
T  378995 tctcat---ttaaaaaaagtttcatggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgat----------agattttgtag 379081  T
Q  208 tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  379082 tgtaattttaacaagaaaaaatcgttcatgaaaagatgagatttattgagattg 379135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 20605226 - 20605437
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  20605226 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 20605322  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||| ||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  20605323 aaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 20605422  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  20605423 aacatgagatttctt 20605437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 28740503 - 28740295
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  28740503 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 28740407  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||          ||||||||||||||||||||||||||||| ||    
T  28740406 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcataaa 28740317  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  28740316 aagatgagatttcttgagattg 28740295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 12407370 - 12407588
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||| ||||||||    |||||||       |||| |||||||||    
T  12407370 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactctta---atcacttaaaaaaagtctagtggtattc 12407466  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  12407467 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaa 12407566  T
Q  240 aagatgagatttcttgagattg 261  Q
    || |||||||||||| ||||||    
T  12407567 aacatgagatttcttaagattg 12407588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 13833642 - 13833434
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||||||||  | || ||||| ||||||   ||||||||||||||| ||   ||||||||       ||||  ||||||||    
T  13833642 tcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagactttt---catcacttaaaaaaagtcttctggtattc 13833546  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||     
T  13833545 aaaatcattcaaattttgaaggattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgac 13833456  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  13833455 aagatgagatttcttgagattg 13833434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 14198765 - 14198586
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| |||||||||||||||||||||||||||    |||||||       |||  |||||||||||||||||||||||||| ||||||||||||||    
T  14198765 ttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaat 14198669  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  14198668 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttctt 14198586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 32125272 - 32125454
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| ||| |||||||||||||||||||||||  | |||| ||       |||  |||||||||||||||||||||||||| ||||||||||||||    
T  32125272 ttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgtttaat 32125371  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||  ||||| |||||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||    
T  32125372 aaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 305685 - 305474
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | || ||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  305685 tcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 305589  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  || |||||||||||||||  ||||||||||||||||||| |||||| ||||| |||||||  | ||||||||||||||||||    
T  305588 aaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaa 305489  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  305488 aacatgagatttctt 305474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 43847636 - 43847847
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| || ||||||    
T  43847636 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagttgtattc 43847732  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  || || |||||||||||||| ||||| ||||| ||||||| || |||||||||| |||||||    
T  43847733 aaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaa 43847832  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  43847833 aacatgagatttctt 43847847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 43078653 - 43078771
Alignment:
Q  143 atcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 242  Q
    |||||||||||||| || ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  243 atgagatttcttgagattg 261  Q
    || ||||||||||||||||    
T  43078753 ataagatttcttgagattg 43078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 35317054 - 35317263
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||| | |||   | |||||||| |||||||  ||||||||||||||||||    |||||||       |||| |||||||||||    
T  35317054 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaa 35317150  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||||    
T  35317151 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 35317250  T
Q  242 gatgagatttctt 254  Q
     || |||||||||    
T  35317251 cataagatttctt 35317263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 254
Target Start/End: Original strand, 9120119 - 9120327
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaa 142  Q
    |||||||||||||||||||| ||| ||| || ||||| |||||||| ||||||||||||| ||||    |||||||        ||| ||| ||||||||    
T  9120119 tgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattctta---atcacttaaaaaaaatctagtgatattcaaa 9120215  T
Q  143 atcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 242  Q
    |||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||  | | |||| |||||||||||||     
T  9120216 atcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaac 9120315  T
Q  243 atgagatttctt 254  Q
    ||||||||||||    
T  9120316 atgagatttctt 9120327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 5093267 - 5093056
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||||||||||||||||||| |||    |||||||       |||| || ||||||    
T  5093267 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgctta---atcacttaaaaaaagtctagtagtattc 5093171  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||  ||||| |||||||||||||||||||| || || ||||||| || ||||||||||||||| ||    
T  5093170 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaa 5093071  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  5093070 aacatgagatttctt 5093056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 22551983 - 22551772
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||| ||    |||||||       |||| |||||||||    
T  22551983 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactttta---atcacttaaaaaaagtctagtggtattc 22551887  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||| ||||||||||| || ||||||||| ||||||  |||| |||||||||||||||||||| ||||| ||||||| || |||||||| |||||||||    
T  22551886 aaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaa 22551787  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  22551786 aacatgagatttctt 22551772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 3463745 - 3463870
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||          |||||||||||||||||||||||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaa 3463834  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||| |||||||||||||||||||    
T  3463835 aagtctttcatgaaaatatgagatttcttgagattg 3463870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7026513 - 7026625
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  7026513 tctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 7026612  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  7026613 gactctttgtcat 7026625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 215525 - 215415
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  215525 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 215427  T
Q  101 gactctttgtca 112  Q
    ||||||||||||    
T  215426 gactctttgtca 215415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 1789432 - 1789630
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||| || ||||||||||| ||||||    |||||||       |||| |||||||||    
T  1789432 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactctta---atcacttaaaaaaagtctagtggtattc 1789528  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| || || ||||||| || ||||||||||||||| ||    
T  1789529 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaa 1789628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28844465 - 28844576
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  28844465 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 28844563  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  28844564 gactctttgtcat 28844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 234
Target Start/End: Original strand, 7026594 - 7026775
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  7026594 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 7026690  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 234  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||||||    
T  7026691 aaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26788694 - 26788805
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  26788694 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 26788792  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  26788793 gactctttgtcat 26788805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28740583 - 28740472
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  28740583 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 28740485  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  28740484 gactctttgtcat 28740472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 44765765 - 44765939
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||| ||||||||    |||||||       |||| |||||||||    
T  44765765 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactctta---atcacttaaaaaaagtctagtggtattc 44765861  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaatttta 217  Q
    ||||||||||||||||| || |||||||||||||||  ||||| |||||||||||||||||||| ||||| |||||||    
T  44765862 aaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 44765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 10125427 - 10125302
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||          ||||||||||| ||||| |||||||||||||||    
T  10125427 gtctcatgatattcaaaatcattcaaatttcaaaggattgtttaataaattgaattt----------tgtgggattttttagtgaaattttaacaagaaa 10125338  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||| |||| | |||||||||| ||||||    
T  10125337 aagtctttcataaaaacacgagatttcttaagattg 10125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 215445 - 215240
Alignment:
Q  40 tcttgtggtattcaatcaagacttttta-caacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtatt 138  Q
    ||||||||||||||||||||||| |||  ||| || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||||||||||||    
T  215445 tcttgtggtattcaatcaagactctttgtcaattttaaaaa-gtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtctcgtggtatt 215350  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 238  Q
    |||||||||||||| ||||||||||||||| ||    ||   ||  ||  |||     |||||||||||||||||||||||| |||||||||||||||||    
T  215349 caaaatcattcaaacttcaaaggattgtttgat----tg---tttaataaatt-----ggattttgtagtgtaattttaaca-gaaaaagtctttcatga 215263  T
Q  239 aaagatgagatttcttgagattg 261  Q
    |||||||||||||| ||||||||    
T  215262 aaagatgagatttcatgagattg 215240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 6224633 - 6224569
Alignment:
Q  197 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattg 6224569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 33135540 - 33135644
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||||||       |||| |||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||    
T  33135540 gattttaaaagactttttaattatgaaaaag-tcttatggtattcaatcaagactttttgcaatttaaaaaaagtattgtggtattcaatcaagactctt 33135638  T
Q  108 tgtcat 113  Q
    ||||||    
T  33135639 tgtcat 33135644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13833722 - 13833611
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||||||||||||||||  |||||||||||       | ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  13833722 tctatgagattttaaaagatattttaattatgaaaaag-tattgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 13833624  T
Q  101 gactctttgtcat 113  Q
    |||| ||| ||||    
T  13833623 gactttttatcat 13833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3463581 - 3463693
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||| |  |||||||||||    
T  3463581 tctatgagattttaaaagactttttaattatgaaaaaa-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttataatattcaatcaa 3463679  T
Q  101 g-actctttgtcat 113  Q
    | ||||||||||||    
T  3463680 gaactctttgtcat 3463693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 3574765 - 3574868
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       | ||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||  ||    
T  3574765 attttaaaagactttttaattatgaaaaagtt-ttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactaatt 3574863  T
Q  109 gtcat 113  Q
    |||||    
T  3574864 gtcat 3574868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 3574839 - 3574976
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    |||||||||||||||||||||  ||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| ||| |||||||    
T  3574839 ttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtgatattcaa 3574935  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3574936 aatcattcaaatttcgaaggattgtttaataaattggattt 3574976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 16269608 - 16269712
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||| ||||||       ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||    
T  16269608 gattttaaaagacttttttattatgaaaaag-tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctt 16269706  T
Q  108 tgtcat 113  Q
    ||||||    
T  16269707 tgtcat 16269712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 20605069 - 20605173
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||||||||||||||||| |||       ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||    
T  20605069 gattttaaaagactttttaatcatgaaaaag-tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctt 20605167  T
Q  108 tgtcat 113  Q
    ||||||    
T  20605168 tgtcat 20605173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 5093309 - 5093236
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 5093236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 20605184 - 20605257
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  20605184 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 20605257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 22552025 - 22551952
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||| ||||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  22552025 tcttgtggtattcaatcaagattttttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 22551952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10125592 - 10125481
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| |||||||||||||| ||||||||||||       ||| |||  |||||||||||||| ||| ||| |||||||| || |||||||||||||||||    
T  10125592 tctaagagattttaaaagattttttaattatgaaaaag-tctcgtgacattcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaa 10125494  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  10125493 gactctttgtcat 10125481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 10657357 - 10657427
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||  |||||||||    
T  10657357 tgtggtattcaatcaaggctttttgaaacttaaaaaaagtcttgtggtattcaatcaagatcctttgtcat 10657427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 1789390 - 1789463
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  1789390 tcttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 1789463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 24776303 - 24776376
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| |||  || |||||||| |||||||| ||||||||||||| ||||||||||    
T  24776303 tcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 24776376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 31170886 - 31170813
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  31170886 tcttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 31170813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 32125198 - 32125271
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||| | ||||||||||    
T  32125198 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttgtcat 32125271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 35317010 - 35317083
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||||| ||||||||||    
T  35317010 tcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcat 35317083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 44765723 - 44765796
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  44765723 tcttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 44765796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 6224808 - 6224737
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||| |||||||| ||||| ||| |||||||| ||| ||||||||| |||||||||||||||||||    
T  6224808 ttgtggtattgaatcaagattttttgcaaattaaaaaaagtcatgtggtatttaatcaagactctttgtcat 6224737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12407290 - 12407401
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||| |||||||||||||||||||| || |||       ||||||||||||||||||||| | ||| ||| || ||||| |||||||| |||||||||||    
T  12407290 tctaagagattttaaaagacttttttatcatgaaaaag-tcttgtggtattcaatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaa 12407388  T
Q  101 gactctttgtcat 113  Q
    || ||||||||||    
T  12407389 gattctttgtcat 12407401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 6224765 - 6224628
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnn-gtctcgtggtattcaa 141  Q
    ||||||||| |||||||||| |||   | || ||||| |||||| |||||||||||||||   ||| |||||||||        |||| |||||||||||    
T  6224765 tgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga---tttttcatcactttaaaaaaagtcttgtggtattcaa 6224669  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    ||| ||||||||||| ||||||| |||||||||||||||||    
T  6224668 aattattcaaatttcgaaggattatttaataaattggattt 6224628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 3574971 - 3575035
Alignment:
Q  197 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||||| ||||| | |||| | ||||| ||||||||||||||||||    
T  3574971 ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattg 3575035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 7027051 - 7027095
Alignment:
Q  217 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattg 7027095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 305728 - 305654
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaactt-aaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| || |||||| |||||||| ||||||||||||| | ||||||||    
T  305728 tcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagattatttgtcat 305654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 8172128 - 8172198
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtca 112  Q
    |||||||||| |||||| ||| ||||  |||||| ||| ||||||||||||| ||||||||||||||||||    
T  8172128 ttgtggtatttaatcaatactctttatcacttaagaaaagtcttgtggtatttaatcaagactctttgtca 8172198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 26601386 - 26601288
Alignment:
Q  74 aaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataa 173  Q
    |||||| ||||||| |||||||||||||||||||    |||||||       ||| ||||||||||||||||||||||||||| || | |||||||||||    
T  26601386 aaaaaaagtcttgtagtattcaatcaagactctta---atcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaataa 26601290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 14198838 - 14198766
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| |||  || |||||||| |||||||| ||||||||||| | ||||||||||    
T  14198838 tcttgtggtattcaatcaagactctttctaatttaaaaaa-gtcttgtgttattcaatcaaaattctttgtcat 14198766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 26601462 - 26601389
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||| ||| |||  || |||||||| || ||||| |||| |||||||||||||||||||    
T  26601462 tcttgtggtattcaatcaaaactctttctaatttaaaaaaagttttgtgttatttaatcaagactctttgtcat 26601389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 20605142 - 20605210
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||||||||||||||||||||||||    
T  20605142 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttt 20605210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattt 182  Q
    |||| |||||||||||||||||||||||||  ||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 43847601 - 43847667
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||| ||| ||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  43847601 gtattcaagcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 43847667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 3574879 - 3574935
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| |||||||| |||||||    
T  3574879 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaa 3574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 33135655 - 33135711
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| |||| |||||||||||    
T  33135655 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaa 33135711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 10859943 - 10859989
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtatt 93  Q
    |||||||||||||||||||||||| ||| || | |||||||||||||    
T  10859943 gtattcaatcaagactttttacaaattacaacaagtcttgtggtatt 10859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 19144972 - 19145033
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaaga 102  Q
    ||||||||||||||||||| |||  || ||| ||||||||  |||||||||||||||||||||    
T  19144972 tcttgtggtattcaatcaaaactcatttcaa-ttaaaaaaaatcttgtggtattcaatcaaga 19145033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 19145013 - 19145080
Alignment:
Q  40 tcttgtggtattcaatcaaga---ctttttacaacttaaaaaatgtcttgtggtattcaatcaagact 104  Q
    |||||||||||||||||||||   || ||||  | |||||||| | ||||||||||||||||||||||    
T  19145013 tcttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaagact 19145080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 305734 - 305702
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  305734 aaaaagtcttgtggtattcaatcaagactcttt 305702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 5093315 - 5093283
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||| |||||||||||||||||||||||||||    
T  5093315 aaaatatcttgtggtattcaatcaagactcttt 5093283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 14198755 - 14198699
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||  |||||||||||    
T  14198755 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaa 14198699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 14198844 - 14198812
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  14198844 aaaaagtcttgtggtattcaatcaagactcttt 14198812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 18177299 - 18177355
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  | |||||||| || |||||||||||||    
T  18177299 tcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaa 18177355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 24776297 - 24776329
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  24776297 aaaaagtcttgtggtattcaatcaagactcttt 24776329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 25288191 - 25288247
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||| ||||||||||| |  ||||||||||  |||||||||||||||    
T  25288191 tcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaa 25288247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 32125192 - 32125224
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  32125192 aaaaagtcttgtggtattcaatcaagactcttt 32125224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 35317004 - 35317036
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  35317004 aaaaagtcttgtggtattcaatcaagactcttt 35317036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 10549 - 10767
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||||||   | |||||| ||        ||| |||||||||    
T  10549 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact---tctcatcatttaaaaaaaatcttgtggtattc 10645  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10646 aaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 10745  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  10746 aagatgagatttcttgagattg 10767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10469 - 10580
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  10469 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaa 10567  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  10568 gactctttgtcat 10580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 1152320 - 1152102
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| |||   |||||||       |||| |||||||||    
T  1152320 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttt---atcacttaaaaaaagtcttgtggtattc 1152224  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1152223 aaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaa 1152124  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||| ||||||    
T  1152123 aagatgagatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 14000322 - 14000104
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | ||  |||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  14000322 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 14000226  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000225 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 14000126  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  14000125 aagatgagatttcttgagattg 14000104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 13925922 - 13926138
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||||||||||||||||||| |||   | || ||||| |||||| |||||||||||||||   ||| |||| ||||       |||| |||||||||||    
T  13925922 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga---tttttcattacttaaaaaaagtcttgtggtattcaa 13926018  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13926019 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaa 13926118  T
Q  242 gatgagatttcttgagattg 261  Q
    ||||| ||||||||||||||    
T  13926119 gatgatatttcttgagattg 13926138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 4550474 - 4550256
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || || || | |||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  4550474 tcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 4550378  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  4550377 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaa 4550278  T
Q  240 aagatgagatttcttgagattg 261  Q
    |||||||||||| |||||||||    
T  4550277 aagatgagatttgttgagattg 4550256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 39852417 - 39852552
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||||||||||||||||    
T  39852517 aagtctttcatgaaaagatgagatttcttgagattg 39852552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 7016956 - 7016745
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||| |||||||||||||||||||    |||||||       |||| |||||||||    
T  7016956 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 7016860  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||| ||    
T  7016859 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 7016760  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  7016759 aacatgagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 75 - 261
Target Start/End: Complemental strand, 7947755 - 7947572
Alignment:
Q  75 aaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaa 174  Q
    ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| | | |||||||||||||||||||||| |||||||||||||||||    
T  7947755 aaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaa 7947659  T
Q  175 ttggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  7947658 ttggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttcttgaaattg 7947572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 21147056 - 21147267
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||    
T  21147056 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 21147152  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  21147153 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 21147252  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  21147253 aacatgagatttctt 21147267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 4240669 - 4240461
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| |||||||||    
T  4240669 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgtggtattc 4240573  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  4240572 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaa 4240483  T
Q  240 aagatgagatttcttgagattg 261  Q
     |||||||||||||||||||||    
T  4240482 tagatgagatttcttgagattg 4240461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 33656260 - 33656047
Alignment:
Q  40 tcttgtggtattcaatcaaga--ctttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtat 137  Q
    ||||||| |||||||||||||  ||||||   | |||||||| |||||||||||||||||||||||||||    |||||||        |||  ||||||    
T  33656260 tcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaaatctaatggtat 33656164  T
Q  138 tcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 237  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  33656163 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 33656064  T
Q  238 aaaagatgagatttctt 254  Q
    |||| ||||||||||||    
T  33656063 aaaatatgagatttctt 33656047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 1461355 - 1461147
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||  || || ||||| |||||| ||||||||||||||||| ||   ||||||||       |||| | | |||||    
T  1461355 tcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgcgctattc 1461259  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||          | |||||||||||||||||||| |||||||||||    
T  1461258 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------actgtaattttaacaagaaaaaatctttcatgaa 1461169  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  1461168 aagatgagatttcttgagattg 1461147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 5949098 - 5949305
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||| |   ||| |||||||||        ||| |||||||||    
T  5949098 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaa---tttttcatcacttaaaaaaa-tcttgtggtattc 5949193  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||||||    
T  5949194 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaa 5949283  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  5949284 aagatgagatttcttgagattg 5949305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 5273136 - 5272925
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||| |||||||||||||||||||||  ||||   ||       |||| |||||||||    
T  5273136 tcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcat---ttaaaaaaagtctagtggtattc 5273040  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || |||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||| ||    
T  5273039 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 5272940  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  5272939 aacatgagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 40013919 - 40013711
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | || ||||| |||||| ||||||||||||||||| ||   ||||| ||        ||| ||| |||||    
T  40013919 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaaatcttgtgttattc 40013823  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||          ||||||||||||||||||||||||||||||||||    
T  40013822 aaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaa 40013733  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||    
T  40013732 aagatgagatttcttgagattg 40013711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||||||||||||||||||||||||    |||||||       ||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  849172 aaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaat 849268  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
      ||||| ||| |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  849269 cagattttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 37013823 - 37013934
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  37013823 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 37013921  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  37013922 gactctttgtcat 37013934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 139264 - 139473
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaa 141  Q
    ||||| ||||||||||||| | |||   | |||||||| ||| |||||||||||||||||||| ||    |||||||       |||| |||||||||||    
T  139264 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactttta---atcacttaaaaaaagtctagtggtattcaa 139360  T
Q  142 aatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 241  Q
    ||||||||||||||| |||||||||||||||||   ||||| |||||||||||| |||||||  |||| |||||||| | ||||||||||||||| ||||    
T  139361 aatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaa 139460  T
Q  242 gatgagatttctt 254  Q
     ||||||||||||    
T  139461 catgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 22746286 - 22746496
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||| ||| |||   | || ||||| |||||| ||||||||||||| ||| ||   ||||||||       |||| ||| |||||    
T  22746286 tcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt---catcacttaaaaaaagtcttgtgatattc 22746382  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| || ||||||||||||||||| |||| ||||||||||||||||        |||||||||||||||||||| |||||||||||    
T  22746383 aaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaa 22746474  T
Q  240 aagatgagatttcttgagattg 261  Q
    ||||| ||||||||| ||||||    
T  22746475 aagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4550554 - 4550443
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4550554 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 4550456  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  4550455 gactctttgtcat 4550443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 27459134 - 27458956
Alignment:
Q  72 ttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaat 171  Q
    |||||||| ||||||| |||||||||||||||||||    |||||||       |||| |||||||||||||||||||| ||||  ||||||||||||||    
T  27459134 ttaaaaaaagtcttgtagtattcaatcaagactctta---atcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaaggattgtttaat 27459039  T
Q  172 aaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    ||||| ||||| |||||||||||||||||||| ||||| ||||||| || |||||| || |||||||||| |||| |||||||    
T  27459038 aaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttctt 27458956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 32158115 - 32157900
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcactt-nnnnnnngtctcgtggtatt 138  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||||||||||||||||||| |    | |||||||        |||| ||||||||    
T  32158115 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagaccc---ctaatcacttaaaaaaaagtctagtggtatt 32158019  T
Q  139 caaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaa---agtctttca 235  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| ||||  ||||||| || |||||   |||||||||    
T  32158018 caaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttca 32157919  T
Q  236 tgaaaagatgagatttctt 254  Q
    |||||| ||||||||||||    
T  32157918 tgaaaacatgagatttctt 32157900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4240749 - 4240638
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  4240749 tctatgagattttaaaagactttttaattatgaaaaagtt-ttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaa 4240651  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  4240650 gactctttgtcat 4240638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1152400 - 1152289
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       |||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  1152400 tctatgagattttaaaagactttttaattatgaaaaaa-tcttgtggtatttaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaa 1152302  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  1152301 gactctttgtcat 1152289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 14000402 - 14000291
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||    
T  14000402 tctatgggattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaatcaa 14000304  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  14000303 gactctttgtcat 14000291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 5949018 - 5949129
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| ||||||||||||| |||||||||||       | ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  5949018 tctatgggattttaaaagaccttttaattatgaaaaattt-ttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 5949116  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  5949117 gactctttgtcat 5949129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 13925847 - 13925951
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||| ||||||||||||       |||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  13925847 gattttaaaagattttttaattatgaaaaag-tcttgtggtatttaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctt 13925945  T
Q  108 tgtcat 113  Q
    ||||||    
T  13925946 tgtcat 13925951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 208
Target Start/End: Complemental strand, 14465438 - 14465279
Alignment:
Q  46 ggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatc 145  Q
    ||||||||||||||||| |||   | |||||||| || || |||||||||||||||||||||   |||| |||       |||| |||||||||||||||    
T  14465438 ggtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactctt---catcgcttaaaaaaagtcttgtggtattcaaaatc 14465342  T
Q  146 attcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagt 208  Q
    ||||||||||| || ||||||||||||||| |||||| |||| ||||||||| ||||| ||||    
T  14465341 attcaaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 22746214 - 22746317
Alignment:
Q  9 attttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||||       ||||||||||||| || |||||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  22746214 attttaaaagactttttaattatgaaaaag-tcttgtggtattcgattaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactcttt 22746312  T
Q  109 gtcat 113  Q
    |||||    
T  22746313 gtcat 22746317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 37013903 - 37014101
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||   | ||  |||| |||||| ||||||||||||||||| ||   ||||||||       |||| | |||||||    
T  37013903 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagactttt---catcacttaaaaaaagtcttgcggtattc 37013999  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| |||| ||||||||||||||||||                    |||||||| ||||||||||||||||||||||||||| ||    
T  37014000 aaaatcattcaaatttcgaagggttgtttaataaattggat--------------------tttgtagtataattttaacaagaaaaagtctttcataaa 37014079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 40013961 - 40013888
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  40013961 tcttgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcat 40013888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 6460869 - 6460965
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaa 227  Q
    |||||||||||||||||||||||||| |||| |||||||||||||  ||||| ||||||||||| |||||||| ||||| ||||||| || ||||||    
T  6460869 gtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 6460739 - 6460812
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| || ||||||||||||| ||||||||||    
T  6460739 tcttgtggtattcaatcaagactctttccaacttaaaaaaagtcttatgttattcaatcaagattctttgtcat 6460812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 254
Target Start/End: Original strand, 9689693 - 9689857
Alignment:
Q  86 gtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcga 185  Q
    ||||||||||||||||||||||   ||||||||       |||| |||||||| ||||||||| ||||||| || |||||||| ||||||| ||||| ||    
T  9689693 gtggtattcaatcaagactctt---catcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttga 9689788  T
Q  186 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    |||||| |||| |||||| | ||  |||||||  | ||||||||||||||| |||| || |||||||||    
T  9689789 tggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttctt 9689857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 1461389 - 1461327
Alignment:
Q  48 tattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgt 110  Q
    |||||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  1461389 tattcaattaagactttttgcaacttaaaaatagtcttgtggtattcaatcaagactctttgt 1461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 21147017 - 21147087
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  21147017 tgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 21147087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 5273252 - 5273147
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||| || |||       ||||||||||||||||||||| | ||| ||| |||||||| |||||||| ||||||||||||| | ||    
T  5273252 gattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 5273153  T
Q  108 tgtcat 113  Q
    ||||||    
T  5273152 tgtcat 5273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 33656302 - 33656234
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactcttt 108  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| |||||    
T  33656302 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattcttt 33656234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 9689607 - 9689674
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||||||||||||||||||| ||| |||||||||| | ||| | |||||||||||||||||||||    
T  9689607 tcttgtggtattcaatcaagactctttccaacttaaaagaagtcgtctggtattcaatcaagactctt 9689674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 16894119 - 16894052
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    ||||||||||||||||||| | | ||| ||| |||||||| |||||||||||||||||||||||||||    
T  16894119 tcttgtggtattcaatcaaaattctttccaatttaaaaaaagtcttgtggtattcaatcaagactctt 16894052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 9220963 - 9220893
Alignment:
Q  43 tgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||| ||| |||||||||||| ||| | || ||||||||||| ||||||||||||    
T  9220963 tgtggtattcaatcaagactatttgcaacttaaaaaaagtcatatgatattcaatcaaaactctttgtcat 9220893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 32158158 - 32158084
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaat-gtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| ||||||||  |||||||| ||||||||||||| ||||||||||    
T  32158158 tcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattctttgtcat 32158084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 7948607 - 7948521
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattca 95  Q
    |||||||||||||||||| ||||||       ||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  7948607 gattttaaaagacttttttattatgaaaaag-tctcgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtgatattca 7948521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 254
Target Start/End: Complemental strand, 9220888 - 9220723
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||||| |||||||||||||||||||   |||||||       ||||  || |||||||||||||||||||||| |||||||||||||| |||    
T  9220888 aaaaagtcttgtgatattcaatcaagactcttt---atcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaat 9220792  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
              | || ||||| ||||||| ||||  |||||||||| ||||||||||||| |||||| |||| |||||||    
T  9220791 ----------tagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttctt 9220723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 139227 - 139293
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||||| ||||||||||    
T  139227 gtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgtcat 139293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 27459201 - 27459135
Alignment:
Q  47 gtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| ||| ||| |||||||| |||||||| |||||||| |||| ||||||||||    
T  27459201 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattctttgtcat 27459135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 5273178 - 5273105
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||| ||||||||||||| |||||   | |||||||| |||||||| ||||||||||||| ||||||||||    
T  5273178 tcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagattctttgtcat 5273105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 14465485 - 14465413
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||| || ||| ||| ||| |||||||| |||| | ||||||||||||||||||||||||||    
T  14465485 tcttgtggtattcaattaaaactctttccaatttaaaaaaagtctgg-ggtattcaatcaagactctttgtcat 14465413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 6902600 - 6902548
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||| ||||||||||||||||| |||||  ||||||||||    
T  6902600 gtggtattcaatcaagattttttacaacttaaaaattgtctcttggtattcaa 6902548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 13925962 - 13926018
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| ||||||||||||||| |||| |  |||||||||| ||||||||||||||||    
T  13925962 tcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaa 13926018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 16894077 - 16894026
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggta 91  Q
    ||||||||||||||||||||||| || |  ||||||||||||||| ||||||    
T  16894077 tcttgtggtattcaatcaagactcttaatcacttaaaaaatgtctagtggta 16894026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 9689693 - 9689742
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtatt 93  Q
    ||||||||||||||||||| || |  |||||||||| |||||||||||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatt 9689742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 849178 - 849234
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| ||||  ||||||||||    
T  849178 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaa 849234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 6460733 - 6460765
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  6460733 aaaaagtcttgtggtattcaatcaagactcttt 6460765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 7016962 - 7016930
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  7016962 aaaaagtcttgtggtattcaatcaagactcttt 7016930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 7947748 - 7947692
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||||| |  |||||||||| |||||| | |||||||    
T  7947748 tcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaa 7947692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 9220882 - 9220826
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||| ||||||||||||||| ||||  |||||||||| ||||| || |||||||    
T  9220882 tcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaa 9220826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 9689601 - 9689633
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  9689601 aaaaagtcttgtggtattcaatcaagactcttt 9689633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 9840975 - 9840931
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtct 84  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||    
T  9840975 tcttgtggtattcaatcaaaactttttagaactttaaaaaagtct 9840931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 10571266 - 10571318
Alignment:
Q  44 gtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    |||||||||||| |||| ||| ||||||||||||| |||||  ||||||||||    
T  10571266 gtggtattcaattaagattttgtacaacttaaaaattgtctattggtattcaa 10571318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 32158164 - 32158132
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  32158164 aaaaagtcttgtggtattcaatcaagactcttt 32158132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 33656308 - 33656276
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  33656308 aaaaagtcttgtggtattcaatcaagactcttt 33656276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 39852376 - 39852432
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||| |||||||||||||||||| | |  | |||||||| ||||||||||||||||    
T  39852376 tcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaa 39852432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 261
Target Start/End: Complemental strand, 37089 - 36907
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||||| ||||||||||||||||||||||||   ||       |||| | |||||||||||||||| ||||||| ||| ||||||||||||||    
T  37089 aaaaagtcttgtgctattcaatcaagactctttgtcat---tttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaat 36993  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36992 tggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattg 36907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 111; Significance: 6e-56; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 39747 - 39617
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39648  T
Q  231 tttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||||||| ||||||||||||||||    
T  39647 tttcatgaaaagataagatttcttgagattg 39617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 39915 - 39804
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  39915 tctatgagattttaaaagaccttttaattatgaaaaag-tcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatcaa 39817  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  39816 gactctttgtcat 39804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 39785 - 39737
Alignment:
Q  48 tattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||| |||| |  |||||||||||||| ||||||||||||    
T  39785 tattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaa 39737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 104; Significance: 9e-52; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 100200 - 100411
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||||||| |||||||||||||||    |||||||       |||| |||||||||    
T  100200 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 100296  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  100297 aaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaa 100396  T
Q  240 aagatgagatttctt 254  Q
    || ||||||||||||    
T  100397 aacatgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 100166 - 100231
Alignment:
Q  48 tattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||| ||  ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  100166 tattcaatcaacacactttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 100231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 13833 - 14079
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||   | || ||||| || ||| |||||||||||||    
T  13833 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaa 13931  T
Q  101 gactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggat 200  Q
    |||| ||   ||||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||          ||||    
T  13932 gactttt---catcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgat----------ggat 14018  T
Q  201 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14019 tttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattg 14079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 21494 - 21248
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||   | || ||||| || ||| |||||||||||||    
T  21494 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaa 21396  T
Q  101 gactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggat 200  Q
    |||| ||   ||||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||             
T  21395 gactttt---catcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggatt--------- 21308  T
Q  201 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
     ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21307 -ttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattg 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 28473 - 28549
Alignment:
Q  186 tggattttgtgggattttg-tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    |||||||||  |||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28473 tggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattg 28549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 15251 - 15040
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||| |||||||||||||||||||    |||||||       |||| |||||||||    
T  15251 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 15155  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  15154 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15055  T
Q  240 aagatgagatttctt 254  Q
    || |||| |||||||    
T  15054 aacatgaaatttctt 15040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 15293 - 15220
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  15293 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 15220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 254
Target Start/End: Complemental strand, 15894 - 15683
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||| ||||||||||||| | |||   | |||||||| ||||||| |||||||||||||||||||    |||||||       |||| |||||||||    
T  15894 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattc 15798  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  15797 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15698  T
Q  240 aagatgagatttctt 254  Q
    || |||| |||||||    
T  15697 aacatgaaatttctt 15683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 15936 - 15863
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  15936 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 15863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 936 - 1070
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaa 225  Q
    |||| |||||||||||||||||||||||||| ||| ||| |||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  226 aagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||| |||| |||||||||||||||||||    
T  1035 aagtctttcattaaaatatgagatttcttgagattg 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 772 - 883
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaa 100  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  772 tctatgggattttaaaagactttttaattatgaaaaat-tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaa 870  T
Q  101 gactctttgtcat 113  Q
    |||||||||||||    
T  871 gactctttgtcat 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 250
Target Start/End: Complemental strand, 39113 - 38906
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||| | ||||  | |||||||| ||||||||||||||||| |||||||||    |||||||       |||| ||| |||||    
T  39113 tcttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactctta---atcacttaaaagaagtctagtgatattc 39017  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 239  Q
    ||||||||||||||||  ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||||||  || ||||||||||||||||||    
T  39016 aaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaa 38917  T
Q  240 aagatgagatt 250  Q
    || ||||||||    
T  38916 aacatgagatt 38906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 254
Target Start/End: Complemental strand, 38786 - 38612
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat 175  Q
    |||| |||||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| |||||||||||||||| |    
T  38786 aaaaagtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-t 38691  T
Q  176 tggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
      ||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  38690 cagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 38612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 38780 - 38724
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  38780 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 38724  T

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Target: scaffold0004 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 81 - 254
Target Start/End: Original strand, 102125 - 102295
Alignment:
Q  81 gtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggat 180  Q
    |||||||||||||||||||||||||||    |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  |||    
T  102125 gtcttgtggtattcaatcaagactctta---atcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagat 102221  T
Q  181 ttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 254  Q
    || |||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  102222 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttctt 102295  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 102126 - 102182
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaa 96  Q
    ||||||||||||||||||||||| || |  |||||||||| |||| |||||||||||    
T  102126 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 102182  T

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Target: scaffold0839 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 3792 - 3692
Alignment:
Q  161 gattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 260  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| ||||||||    
T  3792 gattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgagatt 3693  T
Q  261 g 261  Q
    |    
T  3692 g 3692  T

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Target: scaffold0347 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  186 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

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Target: scaffold0347; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14804 - 14878
Alignment:
Q  1 tctatgagattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaa 76  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||    
T  14804 tctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaacttaaa 14878  T

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Target: scaffold0922 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 191
Target Start/End: Original strand, 4189 - 4337
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcatcacttnnnnnnngtctcgtggtattc 139  Q
    ||||||||||||||||||||||| |||  || || ||||| |||||| ||||||||||||||||| ||   ||||| ||       |||| |||||||||    
T  4189 tcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagactttt---catcatttaaaaaaagtcttgtggtattc 4285  T
Q  140 aaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggatt 191  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  4286 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

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Target: scaffold0922; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 4116 - 4217
Alignment:
Q  8 gattttaaaagactttttaattatgnnnnnnntcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctt 107  Q
    |||||||||||||||||||||| ||       ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  4116 gattttaaaagactttttaattttgaaaaag-tcttgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctt 4214  T
Q  108 tgt 110  Q
    |||    
T  4215 tgt 4217  T

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Target: scaffold0010 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 233685 - 233757
Alignment:
Q  41 cttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  233685 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcat 233757  T

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Target: scaffold0010; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 234533 - 234605
Alignment:
Q  41 cttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  234533 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcat 234605  T

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Target: scaffold0010; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 222517 - 222589
Alignment:
Q  41 cttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    |||||||||||||||||| ||||||| ||||| | |||| |||||||||||||||||||| ||||||||||||    
T  222517 cttgtggtattcaatcaaaactttttgcaactaagaaaaagtcttgtggtattcaatcaaaactctttgtcat 222589  T

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Target: scaffold0276 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 669 - 546
Alignment:
Q  131 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 230  Q
    |||||||||||||||||||||||||  ||||||||||||||||||   |||| |||||||||||||| ||||| ||||| ||||||   | |||||||||    
T  669 gtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtc 570  T
Q  231 tttcatgaaaagatgagatttctt 254  Q
    ||| | ||||| ||||||||||||    
T  569 tttgacgaaaacatgagatttctt 546  T

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Target: scaffold0276; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 799 - 726
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  799 tcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcat 726  T

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Target: scaffold0276; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 805 - 773
Alignment:
Q  76 aaaatgtcttgtggtattcaatcaagactcttt 108  Q
    |||| ||||||||||||||||||||||||||||    
T  805 aaaaagtcttgtggtattcaatcaagactcttt 773  T

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Target: scaffold0651 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 8711 - 8782
Alignment:
Q  42 ttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgtcat 113  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||| |||| |||||||| ||||||||||    
T  8711 ttgtggtattcaatcaagacttttttcaatttaaaaaaagtcttgtgttatttaatcaagattctttgtcat 8782  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 199897 - 199980
Alignment:
Q  126 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttcgatggattttgtgggattttgtagtg 209  Q
    ||||||| ||||| ||||||||||||||||  || || |||||||||||||| |||| ||| ||||||||| |||||| |||||    
T  199897 gtctcgtagtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

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Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 199771 - 199841
Alignment:
Q  40 tcttgtggtattcaatcaagactttttacaacttaaaaaatgtcttgtggtattcaatcaagactctttgt 110  Q
    ||||||||||| |||| |||||| |||  ||||||||||| ||||| ||||||| ||||| ||||||||||    
T  199771 tcttgtggtatccaattaagactctttgtaacttaaaaaaagtcttttggtatttaatcatgactctttgt 199841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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