View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0624_high_1 (Length: 597)

Name: NF0624_high_1
Description: NF0624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0624_high_1
NF0624_high_1
[»] chr8 (32 HSPs)
chr8 (112-589)||(20283273-20283749)
chr8 (112-589)||(21069901-21070377)
chr8 (30-94)||(20284092-20284156)
chr8 (30-94)||(21070720-21070784)
chr8 (29-93)||(39461018-39461082)
chr8 (30-93)||(12625940-12626001)
chr8 (30-93)||(7136551-7136614)
chr8 (30-93)||(16225069-16225132)
chr8 (30-93)||(26954183-26954246)
chr8 (30-93)||(2626572-2626633)
chr8 (30-93)||(13160751-13160812)
chr8 (30-93)||(29877144-29877205)
chr8 (41-93)||(44781528-44781580)
chr8 (30-93)||(20869973-20870036)
chr8 (36-93)||(8483962-8484017)
chr8 (36-93)||(25250578-25250635)
chr8 (30-90)||(36720846-36720904)
chr8 (41-93)||(6760883-6760935)
chr8 (30-93)||(12670274-12670335)
chr8 (41-93)||(16013515-16013567)
chr8 (30-93)||(28817650-28817711)
chr8 (30-93)||(29521709-29521770)
chr8 (30-93)||(44530199-44530260)
chr8 (30-93)||(45071314-45071375)
chr8 (30-77)||(43942374-43942421)
chr8 (41-87)||(17250905-17250951)
chr8 (40-93)||(26102577-26102628)
chr8 (41-93)||(5135313-5135363)
chr8 (41-93)||(8897788-8897838)
chr8 (41-93)||(35261740-35261790)
chr8 (42-93)||(24365083-24365132)
chr8 (30-93)||(30454121-30454182)
[»] scaffold0049 (1 HSPs)
scaffold0049 (30-93)||(59027-59090)
[»] chr6 (14 HSPs)
chr6 (30-93)||(12221939-12222002)
chr6 (30-93)||(29355879-29355942)
chr6 (30-79)||(6024283-6024332)
chr6 (29-90)||(9161171-9161232)
chr6 (36-93)||(12885967-12886024)
chr6 (44-93)||(12892071-12892120)
chr6 (30-93)||(1347012-1347073)
chr6 (30-93)||(1354781-1354842)
chr6 (30-93)||(32579475-32579536)
chr6 (41-80)||(2166447-2166486)
chr6 (41-80)||(2178080-2178119)
chr6 (42-93)||(3116153-3116204)
chr6 (43-94)||(14975113-14975164)
chr6 (41-93)||(383784-383834)
[»] chr5 (23 HSPs)
chr5 (30-93)||(12006352-12006415)
chr5 (30-93)||(38879631-38879694)
chr5 (30-93)||(27328802-27328865)
chr5 (46-93)||(25622524-25622571)
chr5 (30-89)||(4619132-4619191)
chr5 (42-93)||(10306498-10306548)
chr5 (30-89)||(13801795-13801854)
chr5 (30-93)||(20135654-20135717)
chr5 (30-93)||(43334253-43334315)
chr5 (30-94)||(8170007-8170069)
chr5 (41-93)||(16957375-16957425)
chr5 (30-93)||(24448940-24449001)
chr5 (30-93)||(32703472-32703533)
chr5 (30-89)||(41425998-41426055)
chr5 (30-93)||(43574656-43574717)
chr5 (30-90)||(34154841-34154899)
chr5 (30-93)||(2838828-2838889)
chr5 (30-93)||(7368446-7368507)
chr5 (30-82)||(11657734-11657785)
chr5 (41-93)||(12575684-12575735)
chr5 (30-93)||(16880671-16880732)
chr5 (30-93)||(19142967-19143028)
chr5 (57-93)||(39801591-39801627)
[»] chr3 (32 HSPs)
chr3 (30-93)||(13628814-13628877)
chr3 (30-93)||(46421059-46421122)
chr3 (30-93)||(29366744-29366807)
chr3 (30-92)||(45139502-45139563)
chr3 (41-93)||(8247711-8247763)
chr3 (30-93)||(353373-353436)
chr3 (30-93)||(10795447-10795510)
chr3 (41-93)||(13730626-13730678)
chr3 (30-93)||(40272836-40272897)
chr3 (30-93)||(45948862-45948923)
chr3 (30-93)||(54484763-54484824)
chr3 (30-93)||(9607275-9607338)
chr3 (30-93)||(14987029-14987092)
chr3 (30-93)||(45786238-45786301)
chr3 (30-93)||(49013497-49013560)
chr3 (29-93)||(52926243-52926305)
chr3 (37-93)||(5173743-5173799)
chr3 (30-93)||(6411846-6411907)
chr3 (30-93)||(22609837-22609898)
chr3 (41-93)||(25944552-25944603)
chr3 (30-93)||(34771388-34771449)
chr3 (30-93)||(53996589-53996651)
chr3 (30-93)||(54374369-54374431)
chr3 (41-93)||(12914059-12914109)
chr3 (30-90)||(16735512-16735570)
chr3 (41-93)||(829466-829517)
chr3 (30-93)||(7943062-7943123)
chr3 (30-93)||(15797292-15797353)
chr3 (30-89)||(22122945-22123002)
chr3 (30-89)||(26573199-26573256)
chr3 (30-93)||(26869778-26869839)
chr3 (30-93)||(31592919-31592980)
[»] chr2 (20 HSPs)
chr2 (30-93)||(31158463-31158526)
chr2 (41-93)||(14530379-14530431)
chr2 (30-93)||(10543748-10543811)
chr2 (30-93)||(32781312-32781373)
chr2 (29-93)||(11514485-11514546)
chr2 (30-93)||(9671229-9671290)
chr2 (30-93)||(10546213-10546274)
chr2 (30-93)||(24890461-24890522)
chr2 (55-93)||(44643596-44643634)
chr2 (41-93)||(5841089-5841141)
chr2 (30-93)||(8455340-8455401)
chr2 (34-89)||(23488535-23488590)
chr2 (55-93)||(14444801-14444839)
chr2 (55-93)||(26684644-26684682)
chr2 (41-93)||(21779285-21779335)
chr2 (30-87)||(24200653-24200710)
chr2 (536-589)||(32851583-32851636)
chr2 (56-93)||(33795359-33795396)
chr2 (36-87)||(4516381-4516430)
chr2 (57-93)||(34766330-34766366)
[»] chr4 (40 HSPs)
chr4 (40-93)||(33836511-33836564)
chr4 (30-93)||(16911612-16911675)
chr4 (30-73)||(48327807-48327850)
chr4 (41-93)||(23501848-23501900)
chr4 (30-93)||(30690200-30690261)
chr4 (30-93)||(16408625-16408688)
chr4 (30-93)||(20225124-20225187)
chr4 (30-93)||(20639682-20639744)
chr4 (30-93)||(21647014-21647077)
chr4 (36-90)||(16494273-16494327)
chr4 (36-93)||(10660460-10660516)
chr4 (36-93)||(10874605-10874661)
chr4 (36-93)||(30352604-30352661)
chr4 (30-93)||(5648308-5648369)
chr4 (30-93)||(6430650-6430711)
chr4 (29-93)||(21489136-21489199)
chr4 (30-93)||(20405137-20405200)
chr4 (30-93)||(20908660-20908722)
chr4 (52-94)||(8820578-8820620)
chr4 (31-93)||(54730301-54730363)
chr4 (52-93)||(38755932-38755973)
chr4 (48-93)||(44363154-44363199)
chr4 (56-93)||(44718641-44718678)
chr4 (30-93)||(17043418-17043479)
chr4 (30-93)||(20225032-20225093)
chr4 (30-93)||(29207922-29207983)
chr4 (30-93)||(40915878-40915939)
chr4 (49-93)||(47482874-47482918)
chr4 (30-93)||(49796847-49796908)
chr4 (41-93)||(49938617-49938668)
chr4 (30-93)||(51865062-51865123)
chr4 (30-93)||(2813175-2813238)
chr4 (55-93)||(14983907-14983945)
chr4 (56-93)||(21003410-21003447)
chr4 (30-93)||(9987858-9987919)
chr4 (31-94)||(10277780-10277841)
chr4 (30-93)||(11054172-11054233)
chr4 (30-93)||(19027898-19027959)
chr4 (41-89)||(44357281-44357328)
chr4 (30-93)||(47444007-47444068)
[»] chr1 (34 HSPs)
chr1 (30-91)||(35005196-35005257)
chr1 (30-89)||(18741985-18742044)
chr1 (30-93)||(18944716-18944779)
chr1 (30-93)||(20004114-20004177)
chr1 (41-93)||(10668309-10668361)
chr1 (30-93)||(46247977-46248038)
chr1 (30-93)||(27201720-27201783)
chr1 (30-93)||(30395750-30395813)
chr1 (30-88)||(19932782-19932840)
chr1 (36-93)||(45402175-45402230)
chr1 (41-93)||(25468287-25468337)
chr1 (30-93)||(4349711-4349772)
chr1 (30-93)||(15505637-15505698)
chr1 (30-93)||(23768344-23768405)
chr1 (30-93)||(43768212-43768273)
chr1 (30-93)||(45812561-45812622)
chr1 (30-89)||(43207568-43207626)
chr1 (43-93)||(50606487-50606537)
chr1 (41-93)||(47214593-47214643)
chr1 (36-88)||(6358200-6358251)
chr1 (41-93)||(19701654-19701705)
chr1 (30-93)||(32632581-32632642)
chr1 (57-93)||(33594155-33594191)
chr1 (30-93)||(35253211-35253272)
chr1 (41-93)||(42304231-42304283)
chr1 (31-93)||(1517335-1517395)
chr1 (30-93)||(22324965-22325027)
chr1 (31-89)||(35019304-35019359)
chr1 (55-93)||(27474376-27474414)
chr1 (43-93)||(45264423-45264472)
chr1 (30-93)||(11596585-11596646)
chr1 (42-93)||(20982774-20982823)
chr1 (30-93)||(34725122-34725183)
chr1 (41-85)||(35117798-35117842)
[»] scaffold0057 (3 HSPs)
scaffold0057 (37-93)||(46731-46786)
scaffold0057 (41-93)||(46892-46942)
scaffold0057 (30-93)||(24796-24857)
[»] chr7 (29 HSPs)
chr7 (29-93)||(43557521-43557585)
chr7 (30-93)||(47716509-47716572)
chr7 (30-92)||(33500563-33500625)
chr7 (30-93)||(7879688-7879749)
chr7 (30-93)||(22698991-22699055)
chr7 (41-93)||(42805585-42805637)
chr7 (36-93)||(27889340-27889395)
chr7 (30-88)||(46354244-46354302)
chr7 (44-93)||(39123957-39124006)
chr7 (41-93)||(3469199-3469251)
chr7 (30-93)||(10693097-10693158)
chr7 (30-93)||(18512477-18512538)
chr7 (30-93)||(21172033-21172094)
chr7 (30-93)||(42391124-42391185)
chr7 (30-93)||(48735146-48735207)
chr7 (30-88)||(11617617-11617673)
chr7 (31-89)||(33871938-33871994)
chr7 (30-91)||(23419700-23419759)
chr7 (41-93)||(13805162-13805212)
chr7 (32-93)||(21566487-21566547)
chr7 (41-93)||(32758320-32758370)
chr7 (30-93)||(2541043-2541104)
chr7 (30-93)||(19266500-19266561)
chr7 (30-93)||(28362169-28362230)
chr7 (30-93)||(34626232-34626293)
chr7 (30-93)||(35334840-35334901)
chr7 (30-93)||(38604576-38604637)
chr7 (30-93)||(40463926-40463987)
chr7 (30-93)||(42798719-42798780)
[»] scaffold0258 (1 HSPs)
scaffold0258 (30-91)||(13050-13109)
[»] scaffold0180 (1 HSPs)
scaffold0180 (30-93)||(24157-24218)
[»] scaffold0015 (1 HSPs)
scaffold0015 (30-93)||(48658-48719)
[»] scaffold1176 (1 HSPs)
scaffold1176 (31-93)||(1611-1671)
[»] scaffold0311 (1 HSPs)
scaffold0311 (43-93)||(10873-10921)
[»] scaffold0168 (1 HSPs)
scaffold0168 (36-93)||(30633-30688)
[»] scaffold0223 (1 HSPs)
scaffold0223 (29-93)||(11178-11240)
[»] scaffold0187 (2 HSPs)
scaffold0187 (29-93)||(10074-10136)
scaffold0187 (29-93)||(20402-20464)


Alignment Details
Target: chr8 (Bit Score: 363; Significance: 0; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 112 - 589
Target Start/End: Complemental strand, 20283749 - 20283273
Alignment:
Q  112 tttcaatttgttgaactacatataagagttgtatgtttcctcnnnnnnnnnnnnnnnntaagaattgtatgttaacttatactgggatttttgtaacttt 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||                |||||||||||||||||||||||||||||||||||||||||     
T  20283749 tttcaatttgttgaactacatataagaattgtatgtttcctcaaaaaataaaataaaataagaattgtatgttaacttatactgggatttttgtaactt- 20283651  T
Q  212 gctagcttgttagtttgaatggtgg-accctttcctggaccttacgtatgtgagagttttgtacacccgacggggctgccctgaatgttgaaatactcat 310  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20283650 gctagcttgtcggtttgaatggtgggaccctttcctggaccttacgtatgtgagagttttgtacaccggacggggctgccctgaatgttgaaatactcat 20283551  T
Q  311 catatgctttgattagattattatgtataagtgtacatgacctgtaaatgcttcaacatgtatgacatacttatattactattagaattagattgtattg 410  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  20283550 cttatgctttgattagattattatgtataagtgtacatgacctgtacatgcttcaacatgtatgatatactgatattactattagaattagattgtattg 20283451  T
Q  411 attgaaactataaatacaaactagatctatgcttttttattattaattgtagcttccaattcttctcatgtgcatgcttgtgtttttggtccatgacaca 510  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20283450 attgaaattataaatacaaactagat-tatgcttttttattattaattgtagcttccaattcttctcatgtgcatgcttgtgtttctggtccatgacaca 20283352  T
Q  511 gtgtgaacttcaccagtggagaagtggtggaaagaatgatgctttcagggatgcatactgtcacagatatattttgttg 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20283351 gtgtgaacttcaccagtggagaagtggtggaaagaatgatgctttcagggatgcatactgtcgcagatatattttgttg 20283273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 112 - 589
Target Start/End: Complemental strand, 21070377 - 21069901
Alignment:
Q  112 tttcaatttgttgaactacatataagagttgtatgtttcctcnnnnnnnnnnnnnnnntaagaattgtatgttaacttatactgggatttttgtaacttt 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||                |||||||||||||||||||||||||||||||||||||||||     
T  21070377 tttcaatttgttgaactacatataagaattgtatgtttcctcaaaaaataaaataaaataagaattgtatgttaacttatactgggatttttgtaactt- 21070279  T
Q  212 gctagcttgttagtttgaatggtgg-accctttcctggaccttacgtatgtgagagttttgtacacccgacggggctgccctgaatgttgaaatactcat 310  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21070278 gctagcttgtcggtttgaatggtgggaccctttcctggaccttacgtatgtgagagttttgtacaccggacggggctgccctgaatgttgaaatactcat 21070179  T
Q  311 catatgctttgattagattattatgtataagtgtacatgacctgtaaatgcttcaacatgtatgacatacttatattactattagaattagattgtattg 410  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  21070178 cttatgctttgattagattattatgtataagtgtacatgacctgtacatgcttcaacatgtatgatatactgatattactattagaattagattgtattg 21070079  T
Q  411 attgaaactataaatacaaactagatctatgcttttttattattaattgtagcttccaattcttctcatgtgcatgcttgtgtttttggtccatgacaca 510  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21070078 attgaaattataaatacaaactagat-tatgcttttttattattaattgtagcttccaattcttctcatgtgcatgcttgtgtttctggtccatgacaca 21069980  T
Q  511 gtgtgaacttcaccagtggagaagtggtggaaagaatgatgctttcagggatgcatactgtcacagatatattttgttg 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21069979 gtgtgaacttcaccagtggagaagtggtggaaagaatgatgctttcagggatgcatactgtcgcagatatattttgttg 21069901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 20284156 - 20284092
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggagt 94  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  20284156 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagt 20284092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 21070784 - 21070720
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggagt 94  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  21070784 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagt 21070720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 39461082 - 39461018
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| |||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  39461082 agtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggag 39461018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 12625940 - 12626001
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||||||||||||||  ||||||||||| | |||| |||||||||||||||||||    
T  12625940 gtaagactgcatacaatacaccaa--atggtgggaccccctcccggaccctgcgtatgcgggag 12626001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 7136614 - 7136551
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  7136614 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 7136551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 16225069 - 16225132
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||||||||||||||||||||| | |||||| ||||| || ||||||||||    
T  16225069 gtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggag 16225132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 26954183 - 26954246
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||  || ||||||||||    
T  26954183 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggag 26954246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 2626572 - 2626633
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||||||||||  ||| ||||||| ||||||||||||||| ||||||||||    
T  2626572 gtaagactgcgtacaatacaccaa--atgatgggaccccttcccagaccctgcatatgcgggag 2626633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 13160751 - 13160812
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  13160751 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 13160812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 29877144 - 29877205
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  29877144 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 29877205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 44781580 - 44781528
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||| |||| ||||||| | ||||||||||||||||||||||||    
T  44781580 tacaatacaccaaaaatgttgggaccccgtcccagaccctgcgtatgcgggag 44781528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 20869973 - 20870036
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||  ||||| || ||||||||||    
T  20869973 gtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggag 20870036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 8484017 - 8483962
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| ||||||||||||||  |||||||||| | ||||||||||||||||||||||||    
T  8484017 ctgcgtacaatacaccaat--tggtgggaccccatcccagaccctgcgtatgcgggag 8483962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 25250578 - 25250635
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| |||||||||||||||||||||||||| ||||||  |||| || ||||||||||    
T  25250578 ctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggag 25250635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 36720846 - 36720904
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgg 90  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| ||||||||||||||||    
T  36720846 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgg 36720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 6760883 - 6760935
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||| | ||||| || ||||||||||    
T  6760883 tacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggag 6760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 12670335 - 12670274
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  12670335 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 12670274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 16013515 - 16013567
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| || ||||||| |||| ||||||||||||||| ||||||||||    
T  16013515 tacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggag 16013567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 28817711 - 28817650
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||| |  ||||||||||| |||||| |||||||||||||||||||    
T  28817711 gtaaggctgcgtacaatacaccca--atggtgggaccccttcccggaccctgcgtatgcgggag 28817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 29521770 - 29521709
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||| | | ||||||||||||||||||||||||    
T  29521770 gtaaggctgcgtacaatacaccaa--atggtgggaacccatcccagaccctgcgtatgcgggag 29521709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 44530199 - 44530260
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||  |||||||||||||||||||    
T  44530199 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcctggaccctgcgtatgcgggag 44530260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 45071314 - 45071375
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||| ||||||||||||||    
T  45071314 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccttgcgtatgcgggag 45071375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 43942374 - 43942421
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagac 77  Q
    ||||| |||| ||||||||||||| |||||||||||| ||||||||||    
T  43942374 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagac 43942421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 17250951 - 17250905
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatg 87  Q
    ||||||||||||||||||||||||||  |||||  ||||||||||||    
T  17250951 tacaatacaccaataatggtgggaccctttcccgaaccctgcgtatg 17250905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 26102577 - 26102628
Alignment:
Q  40 atacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  26102577 atacaatacaccaa--atggtgggaccccttcccggaccctgcttatgcgggag 26102628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 5135363 - 5135313
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||| ||||    
T  5135363 tacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcaggag 5135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 8897838 - 8897788
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  8897838 tacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 8897788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 35261740 - 35261790
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||  |||||||||||||||||||    
T  35261740 tacaatacaccaa--atggtgggaccccttcctggaccctgcgtatgcgggag 35261790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 24365132 - 24365083
Alignment:
Q  42 acaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||  ||||||||||| |||||| ||||||||||||| |||||    
T  24365132 acaatacaccaa--atggtgggaccccttcccggaccctgcgtatgtgggag 24365083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 30454182 - 30454121
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||| |||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  30454182 gtaaggctgcgtacgatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 30454121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 59027 - 59090
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  59027 gtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggag 59090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 12222002 - 12221939
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  12222002 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 12221939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 29355942 - 29355879
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  29355942 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 29355879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 6024283 - 6024332
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccc 79  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  6024283 gtaagactgcgtacaatacaccaataatgatgggacctcttcccggaccc 6024332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 9161171 - 9161232
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgg 90  Q
    |||||| |||| ||||||||| |||||||||||||||| |||| | ||||||||||||||||    
T  9161171 agtaaggctgcgtacaatacatcaataatggtgggaccccttctcggaccctgcgtatgcgg 9161232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 12885967 - 12886024
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| |||||||||| || |||||||||||| |||||||||||||||||||| |||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggag 12886024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 12892071 - 12892120
Alignment:
Q  44 aatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  12892071 aatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 12892120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 1347012 - 1347073
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  1347012 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 1347073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 1354842 - 1354781
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  1354842 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 1354781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 32579475 - 32579536
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||| ||||  ||||||||||| ||||||||||||||| ||||||||||    
T  32579475 gtaagcctgcgtacaataccccaa--atggtgggaccccttcccagaccctgcatatgcgggag 32579536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 2166486 - 2166447
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccct 80  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  2166486 tacaatacaccaataatggtgggaccccttcccggaccct 2166447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 2178119 - 2178080
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccct 80  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  2178119 tacaatacaccaataatggtgggaccccttcccggaccct 2178080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 3116204 - 3116153
Alignment:
Q  42 acaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||| |||||||||||| |||| | |||| ||||||||||||||    
T  3116204 acaatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggag 3116153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 14975164 - 14975113
Alignment:
Q  43 caatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggagt 94  Q
    |||||||||||||||||||||||| ||||||  |||| || |||||||||||    
T  14975164 caatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagt 14975113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 383834 - 383784
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  || |||||||| |||| |||||||||||||||||||||    
T  383834 tacaatacaccaa--attgtgggaccccttctcagaccctgcgtatgcgggag 383784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 12006415 - 12006352
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  12006415 gtaaggctccatacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggag 12006352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 38879631 - 38879694
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  38879631 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 38879694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 27328802 - 27328865
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  27328802 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggag 27328865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 25622524 - 25622571
Alignment:
Q  46 tacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 25622571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 4619191 - 4619132
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||||    
T  4619191 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcg 4619132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 10306548 - 10306498
Alignment:
Q  42 acaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  10306548 acaatacaccaa-aatggtgggaccccttcccggaccctgcgtatgcgggag 10306498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 13801854 - 13801795
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||||    
T  13801854 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcg 13801795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 20135654 - 20135717
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||| ||||    
T  20135654 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggag 20135717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 43334253 - 43334315
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||    
T  43334253 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcg-atgcgggag 43334315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 8170069 - 8170007
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggagt 94  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| |||||||||||    
T  8170069 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagt 8170007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 16957375 - 16957425
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  16957375 tacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 16957425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 24448940 - 24449001
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||| ||||    
T  24448940 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcaggag 24449001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 32703472 - 32703533
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  32703472 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 32703533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 41425998 - 41426055
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||| |||||||||||||||||||  |||||||||| |||||||||| ||||| |||||    
T  41425998 gtaaggctgcatacaatacaccaat--tggtgggaccccttcccagactctgcggatgcg 41426055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 43574656 - 43574717
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||| |||||  ||||||||||| |||||| |||||||||||||||||||    
T  43574656 gtaaggctgcgtacaatataccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 43574717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 34154899 - 34154841
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgg 90  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| |||||||    
T  34154899 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgg 34154841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 2838828 - 2838889
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||| | |||| | |||||||||||||||||||    
T  2838828 gtaaggctgcgtacaatacaccaa--atggtgggatcccttctcggaccctgcgtatgcgggag 2838889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 7368446 - 7368507
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||||  |||||||||| |||||| |||||||| |||| |||||    
T  7368446 gtaaggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtgggag 7368507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 11657785 - 11657734
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgc 82  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||  |||||||    
T  11657785 gtaaggctgcatacaatacaccaa-aatggtgggaccccttcccgaaccctgc 11657734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 12575735 - 12575684
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||| |||||||||||| |||||  |||||||||||||| ||||    
T  12575735 tacaatacaccaa-aatggtgggaccccttcctggaccctgcgtatgcaggag 12575684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 16880732 - 16880671
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  |||||| |||| |||||| |||| ||||||||||||||    
T  16880732 gtaaggctgcgtacaatacaccaa--atggtgtgaccacttcccggaccatgcgtatgcgggag 16880671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 19143028 - 19142967
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||| ||||||||  ||||||||||| |||||| |||| ||||||||||||||    
T  19143028 gtaaggctgcgtacagtacaccaa--atggtgggaccccttcccggaccatgcgtatgcgggag 19142967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 39801591 - 39801627
Alignment:
Q  57 tggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggag 39801627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 13628877 - 13628814
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13628877 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 13628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 46421122 - 46421059
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  46421122 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 46421059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 29366807 - 29366744
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  29366807 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggag 29366744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 45139563 - 45139502
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcggga 92  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  45139563 gtaaggctgcatacaatacaccaaaaatggtgggaccccttcccaga-cctgcgtatgcggga 45139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 8247763 - 8247711
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  8247763 tacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggag 8247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 353436 - 353373
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  353436 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 353373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 10795510 - 10795447
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  10795510 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggag 10795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 13730678 - 13730626
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  13730678 tacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 13730626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 40272897 - 40272836
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  40272897 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 40272836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 45948923 - 45948862
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||||||||||||||||||  |||||||||| |||| | |||||||||||||||||||    
T  45948923 gtaaggctgcatacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggag 45948862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 54484763 - 54484824
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  54484763 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 54484824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 9607275 - 9607338
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| || ||||||||||||||| ||||||| |||||||||||| || ||||||||||    
T  9607275 gtaaggctgcgtagaatacaccaataatgttgggaccccttcccagaccccgcatatgcgggag 9607338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 14987029 - 14987092
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||||||||||||||||  ||||| |||| ||| ||||||||||    
T  14987029 gtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggag 14987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 45786301 - 45786238
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||| ||||    
T  45786301 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggag 45786238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 49013560 - 49013497
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || || |||||||    
T  49013560 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggag 49013497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 52926305 - 52926243
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| |||| |||||||||||||  ||||||||||  |||||| |||||||||||||||||||    
T  52926305 agtaaggctgcgtacaatacaccaa--atggtgggacaccttcccggaccctgcgtatgcgggag 52926243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 5173799 - 5173743
Alignment:
Q  37 tgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| ||||||||||| ||||||||| || |||||| |||| ||||||||||||||    
T  5173799 tgcatgcaatacaccaaaaatggtggggccccttcccggaccttgcgtatgcgggag 5173743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 6411907 - 6411846
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||| ||||||| ||||||||||| ||||||||||||||    
T  6411907 gtaaggctgcgtacaatacaccaa--atgatgggaccccttcccagaccttgcgtatgcgggag 6411846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 22609837 - 22609898
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||| ||||||||||||||    
T  22609837 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccttgcgtatgcgggag 22609898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 25944552 - 25944603
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||| |||||    
T  25944552 tacaatacaccaa-aatggtgggaccccttccctgaccctgcgtatgtgggag 25944603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 34771449 - 34771388
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  34771449 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 34771388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 53996651 - 53996589
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| ||| ||||||||| |||||    
T  53996651 gtaaggctgcttacaatacaccaa-aatggtgggaccccttccctgacactgcgtatgtgggag 53996589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 54374431 - 54374369
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||    
T  54374431 gtaaggctgcgtacaatccaccaa-aatggtgggaccccttcccggaccctgcatatgcgggag 54374369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 12914109 - 12914059
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  |||||| |||| ||||||||||||||| ||||||||||    
T  12914109 tacaatacaccaa--atggtgagaccccttcccagaccctgcatatgcgggag 12914059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 16735512 - 16735570
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgg 90  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| ||| ||||||||||||    
T  16735512 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggacactgcgtatgcgg 16735570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 829517 - 829466
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||||||| ||||    
T  829517 tacaatacaccaa-aatggtgggaccccttcccgaaccctgcgtatgcaggag 829466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 7943062 - 7943123
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| ||||||||| |||  ||||||||| | ||| ||||||| ||||||||||||||    
T  7943062 gtaagactgcgtacaatacatcaa--atggtgggatccctttccagaccatgcgtatgcgggag 7943123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 15797292 - 15797353
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| |||| |||||    
T  15797292 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgtgggag 15797353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 22123002 - 22122945
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||    
T  22123002 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcg 22122945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 26573199 - 26573256
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||| |||| ||||||||||||||  |||||||||| | |||| |||||||||||||||    
T  26573199 gtaaggctgcgtacaatacaccaat--tggtgggaccccatcccggaccctgcgtatgcg 26573256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 26869778 - 26869839
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| ||| || |||| ||||||||||||||    
T  26869778 gtaaggctgcgtacaatacaccaa--atggtgggaccccttgccggaccatgcgtatgcgggag 26869839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 31592919 - 31592980
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||  |||||| |||||||| ||||||||||    
T  31592919 gtaaggctgcgtacaatacaccaa--atggtgggactccttcccggaccctgcatatgcgggag 31592980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 31158526 - 31158463
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  31158526 gtaagattgcatacaataaaccaaaaatggtgggaccccttcccagaccctgcgtatgcgggag 31158463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 14530379 - 14530431
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  14530379 tacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 14530431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 10543748 - 10543811
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  10543748 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggag 10543811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 32781373 - 32781312
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||||||||||  ||||||||||| |||||||||||||| |||||||||||    
T  32781373 gtaagactgcgtacaatacaccaa--atggtgggaccccttcccagaccctgtgtatgcgggag 32781312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 11514485 - 11514546
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| |||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  11514485 agtaaggctgcgtacaatacaccaa--atggtgggacc-cttcccagaccctgcgtatgcgggag 11514546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 9671229 - 9671290
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  9671229 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 9671290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 10546213 - 10546274
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  10546213 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 10546274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 24890461 - 24890522
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||||||||||||||||||  |||||||||| |||||| |||||||||||||| ||||    
T  24890461 gtaaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcaggag 24890522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 44643596 - 44643634
Alignment:
Q  55 aatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  44643596 aatggtgggaccccttcccagaccctgcgtatgcgggag 44643634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 5841089 - 5841141
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||| |||||||||||||||| |||||| ||||| || ||||||||||    
T  5841089 tacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggag 5841141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 8455401 - 8455340
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||| ||||    
T  8455401 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgccggag 8455340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 23488535 - 23488590
Alignment:
Q  34 gactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    |||||| | |||||||| || |||||||||||| |||||| |||||||||||||||    
T  23488535 gactgcgtgcaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcg 23488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 14444801 - 14444839
Alignment:
Q  55 aatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  14444801 aatggtgggaccccttcccggaccctgcgtatgcgggag 14444839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 26684682 - 26684644
Alignment:
Q  55 aatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  26684682 aatggtgggacctcttcccgaaccctgcgtatgcgggag 26684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 21779335 - 21779285
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  21779335 tacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 21779285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 24200710 - 24200653
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatg 87  Q
    ||||| |||| ||||||||||||| |||||||||| | |||||| ||||||| |||||    
T  24200710 gtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagtatg 24200653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 589
Target Start/End: Complemental strand, 32851636 - 32851583
Alignment:
Q  536 ggtggaaagaatgatgctttcagggatgcatactgtcacagatatattttgttg 589  Q
    ||||||||| ||||||||||||||  |||| ||||| |||||||| ||||||||    
T  32851636 ggtggaaaggatgatgctttcaggattgcacactgtgacagatatcttttgttg 32851583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 33795359 - 33795396
Alignment:
Q  56 atggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  33795359 atggtgggaccccttcccagaccctgtgtatgcgggag 33795396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 4516430 - 4516381
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatg 87  Q
    |||| ||||||||||||||  |||||||||| |||||| |||||||||||||    
T  4516430 ctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcgtatg 4516381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 34766330 - 34766366
Alignment:
Q  57 tggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||| |||||||||||||||||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggag 34766366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 33836564 - 33836511
Alignment:
Q  40 atacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  33836564 atacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 33836511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 16911612 - 16911675
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  16911612 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggag 16911675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 48327850 - 48327807
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttccc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  48327850 gtaagactgcatacaatacaccaataatggtgggacctcttccc 48327807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 23501848 - 23501900
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  23501848 tacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggag 23501900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 30690261 - 30690200
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||||||||||||||||||  |||||||||| |||||| |||||||||||||||||||    
T  30690261 gtaaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcgggag 30690200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 16408688 - 16408625
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||||||||||||||||||| ||| |||||| ||||| || ||||||||||    
T  16408688 gtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggag 16408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 20225124 - 20225187
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  20225124 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 20225187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 20639744 - 20639682
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  20639744 gtaaggctgcgtacaatacaccaa-aatggtgggaccccttcccggaccctgcgtatgcgggag 20639682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 21647014 - 21647077
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||| |||||||||||||||||| |||||||||||| || ||||||||||    
T  21647014 gtaaggctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggag 21647077  T

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Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 16494273 - 16494327
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgg 90  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||    
T  16494273 ctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcgg 16494327  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 10660460 - 10660516
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||    
T  10660460 ctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggag 10660516  T

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Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 10874605 - 10874661
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||    
T  10874605 ctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggag 10874661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 30352661 - 30352604
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| ||||||||||||| |||||||||||| |||| | |||||||||||||||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggag 30352604  T

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Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 5648308 - 5648369
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  5648308 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 5648369  T

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Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 6430711 - 6430650
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  6430711 gtaaggctgcgtacaatacaccaa--atggtgggaccacttcccggaccctgcgtatgcgggag 6430650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 21489136 - 21489199
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| |||||| |||||| |||||||||||| ||||||  ||||||||||||||||||    
T  21489136 agtaagactgcgtacaatgcaccaa-aatggtgggaccccttcccgaaccctgcgtatgcgggag 21489199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 20405137 - 20405200
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| ||| |||||||||| ||||||||||||||| |||||| ||||| || ||||||||||    
T  20405137 gtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggag 20405200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 20908722 - 20908660
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| ||||||  ||||||||||||||||||    
T  20908722 gtaaggctgcgtacaatacaccaa-aatggtgggaccccttcccgaaccctgcgtatgcgggag 20908660  T

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Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 8820578 - 8820620
Alignment:
Q  52 aataatggtgggacctcttcccagaccctgcgtatgcgggagt 94  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  8820578 aataatggtgggaccccttcccagaccctgcgtatgcgagagt 8820620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 54730301 - 54730363
Alignment:
Q  31 taagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| |||| || ||||||||||||||| ||| ||| |||||| |||||||||||||||||||    
T  54730301 taaggctgcgtataatacaccaataatgatggaaccccttcccggaccctgcgtatgcgggag 54730363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 38755973 - 38755932
Alignment:
Q  52 aataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  38755973 aataatggtgggaccccttcccggaccctgcgtatgcgggag 38755932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 44363199 - 44363154
Alignment:
Q  48 caccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||    
T  44363199 caccaaaaatggtgggaccccttcccggaccctgcgtatgcgggag 44363154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 44718641 - 44718678
Alignment:
Q  56 atggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggag 44718678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 17043479 - 17043418
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| ||||||||||||||| ||||| ||||    
T  17043479 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccagaccctgcatatgctggag 17043418  T

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Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 20225032 - 20225093
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  20225032 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 20225093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 29207983 - 29207922
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  29207983 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 29207922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 40915878 - 40915939
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||| | |||||| |||||||||||||||||||    
T  40915878 gtaaggctgcgtacaatacaccaa--atggtgggagcccttcccggaccctgcgtatgcgggag 40915939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 47482918 - 47482874
Alignment:
Q  49 accaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggag 47482874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 49796847 - 49796908
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| ||||||  ||||||||||||||||||    
T  49796847 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccgaaccctgcgtatgcgggag 49796908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 49938668 - 49938617
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  49938668 tacaatacaccaa-aatggtgggaccccttcccataccctgcatatgcgggag 49938617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 51865123 - 51865062
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  |||||||| || |||||| |||||||||||||||||||    
T  51865123 gtaaggctgcgtacaatacaccaa--atggtggggccccttcccggaccctgcgtatgcgggag 51865062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 2813175 - 2813238
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| ||||||||| ||||||||||||||||  |||||  ||  ||||||||||||||    
T  2813175 gtaagactgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggag 2813238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 14983907 - 14983945
Alignment:
Q  55 aatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  14983907 aatggtgggaccccttcccggaccctgcgtatgcgggag 14983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 21003410 - 21003447
Alignment:
Q  56 atggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  21003410 atggtgtgacctcttcccagaccctgcgtgtgcgggag 21003447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 9987919 - 9987858
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||||||||||||||||  |||||||||||| |||||  |||| ||| ||||||||||    
T  9987919 gtaaggctgcatacaatacacca--aatggtgggaccccttccttgaccttgcatatgcgggag 9987858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 10277841 - 10277780
Alignment:
Q  31 taagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggagt 94  Q
    |||| |||| |||||||||||||  ||||||  ||| ||||||||||||||| |||||||||||    
T  10277841 taaggctgcgtacaatacaccaa--atggtgaaaccccttcccagaccctgcatatgcgggagt 10277780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 11054233 - 11054172
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| ||||||||||||  ||||| || ||| |||||| |||||||| ||||||||||    
T  11054233 gtaagactgcgtacaatacacca--aatggcggaaccccttcccggaccctgcatatgcgggag 11054172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 19027898 - 19027959
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||||  |||||||||| ||| |||||| ||||||||| |||||    
T  19027898 gtaaggctgcgtacaatacaccaat--tggtgggacccctttccagactctgcgtatgtgggag 19027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 44357281 - 44357328
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||||||||||| ||||| |||||||||||||||||||| || |||||    
T  44357281 tacaatacaccaa-aatggcgggacctcttcccagaccctacgcatgcg 44357328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 47444007 - 47444068
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||| ||||    
T  47444007 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcaggag 47444068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 35005196 - 35005257
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcggg 91  Q
    ||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  35005196 gtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcggg 35005257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 18742044 - 18741985
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  18742044 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcg 18741985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 18944716 - 18944779
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  18944716 gtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggag 18944779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 20004177 - 20004114
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  20004177 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggag 20004114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 10668309 - 10668361
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  10668309 tacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggag 10668361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 46248038 - 46247977
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  46248038 gtaagactgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 46247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 27201720 - 27201783
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||    
T  27201720 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggag 27201783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 30395813 - 30395750
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  30395813 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 30395750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 19932840 - 19932782
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgc 88  Q
    ||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  19932840 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgc 19932782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 45402175 - 45402230
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  45402175 ctgcgtacaatacaccaa--atggtgggaccccttcccagaccctgcgtatgcgggag 45402230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 25468337 - 25468287
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  25468337 tacaatacaccaa--atggttggacctcttcccagaccctgcgtatgcgggag 25468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 4349711 - 4349772
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  4349711 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 4349772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 15505637 - 15505698
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||||||||||  ||||||||||| ||||||  ||||||||||||||||||    
T  15505637 gtaagactgcgtacaatacaccaa--atggtgggaccccttcccgaaccctgcgtatgcgggag 15505698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 23768405 - 23768344
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||  ||||||||||||||||||||||||||    
T  23768405 gtaaggctgcgtacaatacaccaa--atggtgggacaccttcccagaccctgcgtatgcgggag 23768344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 43768212 - 43768273
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||||||  |||||||||| ||||||||||||||||||| ||||||    
T  43768212 gtaaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggag 43768273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 45812622 - 45812561
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| ||||||||||||||||||  ||||||||||| ||||||| ||||||| ||||||||||    
T  45812622 gtaaggctgcatacaatacaccaa--atggtgggaccccttcccaaaccctgcatatgcgggag 45812561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 43207568 - 43207626
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||||||  |||||||    
T  43207568 gtaagacggcatacaatacaccaa-attggtgggacctcttcccagaccctatgtatgcg 43207626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 50606487 - 50606537
Alignment:
Q  43 caatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| |||||||||||| |||||| |||||||| ||||||||||    
T  50606487 caatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggag 50606537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 47214593 - 47214643
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| ||||||||||||||| ||||||||||    
T  47214593 tacaatacaccaa--atggtgggaccccttcccagaccctgcatatgcgggag 47214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 6358200 - 6358251
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgc 88  Q
    |||| ||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  6358200 ctgcgtacaaaacaccaa-aatggtgggaccccttcccagaccctgcgtatgc 6358251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 19701654 - 19701705
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||| ||||||||| || |||||| |||||||||||||||||||    
T  19701654 tacaatacaccaa-aatggtggggccccttcccggaccctgcgtatgcgggag 19701705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 32632642 - 32632581
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| ||||||| ||||||| ||||||||||    
T  32632642 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccaaaccctgcatatgcgggag 32632581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 33594191 - 33594155
Alignment:
Q  57 tggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggag 33594155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 35253272 - 35253211
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  35253272 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 35253211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 42304283 - 42304231
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| || |||||||||||| |||||| ||||||||||||| |||||    
T  42304283 tacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggag 42304231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 1517395 - 1517335
Alignment:
Q  31 taagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| |||| ||||||||||||||  |||||||||| |||| |||||||||||||||| ||||    
T  1517395 taaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggag 1517335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 22324965 - 22325027
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||||||||||||||||| ||||||||  || | |||| |||||||||||||||||||    
T  22324965 gtaaggctgcatacaatacaccaaaaatggtggagccccgtccc-gaccctgcgtatgcgggag 22325027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 35019304 - 35019359
Alignment:
Q  31 taagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    |||| |||||||||||||||||||  |||||||||| | ||||||||||||||||||||    
T  35019304 taaggctgcatacaatacaccaat--tggtgggacc-cctcccagaccctgcgtatgcg 35019359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 27474376 - 27474414
Alignment:
Q  55 aatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  27474376 aatggtgggaccccttcccggaccctgcgtatgcgggag 27474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 45264472 - 45264423
Alignment:
Q  43 caatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| |||||||||||| |||| |||||||||| ||||||||||    
T  45264472 caatacaccaa-aatggtgggaccccttctcagaccctgcatatgcgggag 45264423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 11596585 - 11596646
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| || ||||||||||  ||||||||||| |||||  |||||||||||||||||||    
T  11596585 gtaaggctgcgtataatacaccaa--atggtgggaccccttcctggaccctgcgtatgcgggag 11596646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 20982823 - 20982774
Alignment:
Q  42 acaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||  ||||||||||| |||||| | |||||||||||||||||||    
T  20982823 acaatacacc--taatggtgggatctcttctcggaccctgcgtatgcgggag 20982774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 34725183 - 34725122
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||| ||  ||||||||||| |||||| |||||||| ||||||||||    
T  34725183 gtaaggctgcgtacaatacactaa--atggtgggaccccttcccggaccctgcatatgcgggag 34725122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 35117842 - 35117798
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgta 85  Q
    ||||||||||||| |||| ||||||| |||||| |||||||||||    
T  35117842 tacaatacaccaaaaatgatgggaccccttcccggaccctgcgta 35117798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 46786 - 46731
Alignment:
Q  37 tgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  46786 tgcatacaatataccaa-aatggtgggaccccttcccagaccctgcgtatgcgggag 46731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 46892 - 46942
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  46892 tacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 46942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 24857 - 24796
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||    
T  24857 gtaaggctgcgtacaacacaccaa--atggtgggaccccttcccgaaccctgcgtatgcgggag 24796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 43557521 - 43557585
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| |||| |||||||||||||||||||||||||| | |||| ||| |||||||||||||||    
T  43557521 agtaaggctgcgtacaatacaccaataatggtgggaccccctcccggactctgcgtatgcgggag 43557585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 47716509 - 47716572
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  47716509 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 47716572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 33500563 - 33500625
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcggga 92  Q
    |||||||||| ||| |||||| || |||||||||||| |||||| ||||||||||||||||||    
T  33500563 gtaagactgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcggga 33500625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 7879688 - 7879749
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  7879688 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 7879749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 22699055 - 22698991
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtggga-cctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||    
T  22699055 gtaagactgcgtacaatacaccaaaaatggtgggacccttttcccggaccctgtgtatgcgggag 22698991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 42805585 - 42805637
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  42805585 tacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggag 42805637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 27889395 - 27889340
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  27889395 ctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 27889340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 46354244 - 46354302
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgc 88  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| ||||| || |||||    
T  46354244 gtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 46354302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 39123957 - 39124006
Alignment:
Q  44 aatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||| |||||||||||| |||||| ||||||||||||| |||||    
T  39123957 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 39124006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 3469251 - 3469199
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||||| ||||| |||||| ||||| |||||||| |||||||||||    
T  3469251 tacaatacaccaaaaatggcgggaccccttcctagaccctgtgtatgcgggag 3469199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 10693158 - 10693097
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  10693158 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 10693097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 18512538 - 18512477
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||||||||||| |  ||||||||||| |||||| |||||||||||||||||||    
T  18512538 gtaaggctgcgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgcgggag 18512477  T

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Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 21172094 - 21172033
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  21172094 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 21172033  T

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Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 42391185 - 42391124
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  42391185 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 42391124  T

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Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 48735207 - 48735146
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  48735207 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 48735146  T

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Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 11617673 - 11617617
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgc 88  Q
    |||||||||| |||||||||||||  ||||||||||| |||||  ||||||||||||||    
T  11617673 gtaagactgcgtacaatacaccaa--atggtgggaccccttcctggaccctgcgtatgc 11617617  T

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Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 33871994 - 33871938
Alignment:
Q  31 taagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcg 89  Q
    |||| |||| |||||||||||||  ||||||||||| |||||||||||||| |||||||    
T  33871994 taaggctgcgtacaatacaccaa--atggtgggaccccttcccagaccctgtgtatgcg 33871938  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 23419759 - 23419700
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcggg 91  Q
    |||||||||| |||||||||||||  ||||||||||| ||||| ||||| ||||| ||||||    
T  23419759 gtaagactgcgtacaatacaccaa--atggtgggaccccttcctagaccttgcgtgtgcggg 23419700  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 13805162 - 13805212
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||  |||||||||||||||||||    
T  13805162 tacaatacaccaa--atggtgggaccacttcctggaccctgcgtatgcgggag 13805212  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 21566487 - 21566547
Alignment:
Q  32 aagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||| ||||||||||||| |||||| ||||| ||||||  ||||||| ||||||||||    
T  21566487 aagactgcgtacaatacaccaa-aatggtaggaccccttcccgaaccctgcatatgcgggag 21566547  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 32758320 - 32758370
Alignment:
Q  41 tacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  32758320 tacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 32758370  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 2541104 - 2541043
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| ||| |||||||||  ||||||||||| |||||| | |||||||||||||||||    
T  2541104 gtaaggctgcgtactatacaccaa--atggtgggaccccttcccggtccctgcgtatgcgggag 2541043  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 19266500 - 19266561
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  || |||||| | |||||| |||||||||||||||||||    
T  19266500 gtaaggctgcgtacaatacaccaa--attgtgggatcccttcccggaccctgcgtatgcgggag 19266561  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 28362230 - 28362169
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| ||||||||||| ||| |||| |||||    
T  28362230 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccagaccttgcatatgtgggag 28362169  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 34626293 - 34626232
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| | |||||||||||  ||||||||| | |||||| |||||||||||||||||||    
T  34626293 gtaaggctgcgttcaatacaccaa--atggtgggatcccttcccggaccctgcgtatgcgggag 34626232  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 35334901 - 35334840
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||  ||||||||||| |  ||||||||||| |||||| |||||||||||||| ||||    
T  35334901 gtaagactgtgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgcaggag 35334840  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 38604576 - 38604637
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  |||||| |||| ||| || |||||||||||||||||||    
T  38604576 gtaaggctgcgtacaatacaccaa--atggtgagacccctttccggaccctgcgtatgcgggag 38604637  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 40463926 - 40463987
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| || ||||||||||  ||||||||||| |||| | |||||||||||||||||||    
T  40463926 gtaaggctgcgtataatacaccaa--atggtgggaccccttctcggaccctgcgtatgcgggag 40463987  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 42798719 - 42798780
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  |||||||||||  ||||| |||||||| ||||||||||    
T  42798719 gtaaggctgcgtacaatacaccaa--atggtgggaccctttcccggaccctgcatatgcgggag 42798780  T

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Target: scaffold0258 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 13109 - 13050
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcggg 91  Q
    ||||| |||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||    
T  13109 gtaaggctgcgtacaatacaccga--atggtgggaccccttcccagaccctgcgtatgcggg 13050  T

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Target: scaffold0180 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 24218 - 24157
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  24218 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 24157  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 48719 - 48658
Alignment:
Q  30 gtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||| |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  48719 gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 48658  T

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Target: scaffold1176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 1671 - 1611
Alignment:
Q  31 taagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| ||||||||||||||||||  ||| ||||||| |||||| ||||| |||||||||||||    
T  1671 taaggctgcatacaatacaccaa--atgatgggaccccttcccggacccggcgtatgcgggag 1611  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 10873 - 10921
Alignment:
Q  43 caatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  10873 caatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggag 10921  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 30633 - 30688
Alignment:
Q  36 ctgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||| |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  30633 ctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggag 30688  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 11178 - 11240
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    |||||| |||| |||||||||||||  ||||||||||  |||||| |||||||| ||||||||||    
T  11178 agtaaggctgcttacaatacaccaa--atggtgggacaccttcccggaccctgcatatgcgggag 11240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 10136 - 10074
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| ||||||||||||  ||| |||||||| |||||| |||||||| ||||| ||||    
T  10136 agtaagactgcgtacaatacacca--aatagtgggaccccttcccggaccctgcatatgcaggag 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 20464 - 20402
Alignment:
Q  29 agtaagactgcatacaatacaccaataatggtgggacctcttcccagaccctgcgtatgcgggag 93  Q
    ||||||||||| ||||||||||||  ||| |||||||| |||||| |||||||| ||||| ||||    
T  20464 agtaagactgcgtacaatacacca--aatagtgggaccccttcccggaccctgcatatgcaggag 20402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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