View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0624_low_5 (Length: 422)

Name: NF0624_low_5
Description: NF0624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0624_low_5
NF0624_low_5
[»] chr8 (48 HSPs)
chr8 (46-406)||(24844866-24845230)
chr8 (346-414)||(31347782-31347850)
chr8 (346-414)||(32064742-32064810)
chr8 (347-414)||(7017865-7017932)
chr8 (347-414)||(26042116-26042183)
chr8 (349-414)||(20091801-20091866)
chr8 (349-414)||(34665382-34665447)
chr8 (345-414)||(40780129-40780198)
chr8 (346-414)||(17841850-17841918)
chr8 (347-414)||(42755042-42755109)
chr8 (347-413)||(15187558-15187624)
chr8 (349-414)||(24211553-24211618)
chr8 (349-414)||(32393858-32393923)
chr8 (349-414)||(37132658-37132723)
chr8 (346-414)||(1645965-1646033)
chr8 (350-414)||(27782117-27782181)
chr8 (346-414)||(39772801-39772869)
chr8 (347-414)||(6108233-6108300)
chr8 (352-414)||(8453837-8453899)
chr8 (349-403)||(27835464-27835518)
chr8 (349-414)||(35353041-35353106)
chr8 (357-414)||(38016979-38017036)
chr8 (350-414)||(14128865-14128929)
chr8 (347-414)||(37986055-37986122)
chr8 (353-414)||(6108032-6108092)
chr8 (349-414)||(30835047-30835111)
chr8 (359-414)||(7021988-7022043)
chr8 (353-414)||(1503642-1503702)
chr8 (353-414)||(3890413-3890474)
chr8 (353-414)||(17841649-17841709)
chr8 (353-414)||(25581038-25581098)
chr8 (353-414)||(26041912-26041972)
chr8 (353-414)||(32064952-32065012)
chr8 (353-414)||(37132479-37132540)
chr8 (353-418)||(38017135-38017199)
chr8 (353-414)||(40779928-40779988)
chr8 (354-414)||(25581239-25581299)
chr8 (361-412)||(30834862-30834913)
chr8 (360-414)||(35353247-35353300)
chr8 (348-414)||(41819778-41819844)
chr8 (381-414)||(3817930-3817963)
chr8 (381-414)||(3890616-3890649)
chr8 (353-414)||(10044554-10044614)
chr8 (353-414)||(14129065-14129125)
chr8 (353-414)||(20091600-20091660)
chr8 (353-414)||(30055722-30055782)
chr8 (353-414)||(34665587-34665647)
chr8 (353-414)||(37985855-37985915)
[»] chr7 (23 HSPs)
chr7 (347-414)||(15329271-15329338)
chr7 (349-414)||(48880927-48880992)
chr7 (347-414)||(45637710-45637777)
chr7 (348-414)||(15577850-15577916)
chr7 (349-414)||(3961979-3962044)
chr7 (349-414)||(4974735-4974800)
chr7 (349-414)||(15238382-15238447)
chr7 (349-414)||(34482835-34482900)
chr7 (349-414)||(42611811-42611876)
chr7 (347-414)||(37477080-37477147)
chr7 (349-414)||(25167850-25167915)
chr7 (349-412)||(24394972-24395035)
chr7 (348-414)||(18036977-18037043)
chr7 (348-414)||(35444557-35444623)
chr7 (349-414)||(20010098-20010162)
chr7 (352-413)||(36790467-36790528)
chr7 (353-414)||(29737143-29737204)
chr7 (353-414)||(25167655-25167715)
chr7 (353-414)||(35445603-35445663)
chr7 (353-414)||(48880726-48880786)
chr7 (347-414)||(42696081-42696148)
chr7 (353-414)||(30848775-30848835)
chr7 (369-414)||(40880792-40880837)
[»] chr4 (42 HSPs)
chr4 (344-414)||(10442789-10442859)
chr4 (348-414)||(33530688-33530754)
chr4 (346-414)||(21802322-21802390)
chr4 (342-414)||(24128232-24128304)
chr4 (346-414)||(24392664-24392732)
chr4 (348-414)||(31078819-31078885)
chr4 (349-414)||(22199261-22199326)
chr4 (349-414)||(49387888-49387953)
chr4 (346-414)||(47290063-47290131)
chr4 (349-412)||(36072947-36073010)
chr4 (343-414)||(44893420-44893491)
chr4 (349-414)||(2624837-2624902)
chr4 (349-414)||(46441844-46441909)
chr4 (348-412)||(4751445-4751509)
chr4 (350-414)||(7745112-7745176)
chr4 (347-414)||(36073348-36073415)
chr4 (346-414)||(23964465-23964533)
chr4 (342-414)||(50156578-50156650)
chr4 (348-414)||(53123029-53123096)
chr4 (355-414)||(42671675-42671734)
chr4 (348-414)||(44893213-44893280)
chr4 (353-414)||(9089076-9089136)
chr4 (353-414)||(11314050-11314111)
chr4 (353-414)||(21802119-21802179)
chr4 (353-414)||(25063373-25063434)
chr4 (353-414)||(36073555-36073615)
chr4 (361-414)||(42671874-42671927)
chr4 (353-414)||(46442050-46442110)
chr4 (361-414)||(50156386-50156438)
chr4 (353-414)||(53123237-53123297)
chr4 (353-413)||(24128446-24128505)
chr4 (362-414)||(36073743-36073795)
chr4 (353-412)||(4751655-4751713)
chr4 (348-403)||(37934952-37935007)
chr4 (353-403)||(47290283-47290332)
chr4 (353-414)||(10442586-10442646)
chr4 (377-414)||(17655458-17655495)
chr4 (353-414)||(31078618-31078678)
chr4 (361-414)||(37219837-37219890)
chr4 (353-414)||(44893012-44893072)
chr4 (353-414)||(44893632-44893692)
chr4 (353-413)||(17655637-17655697)
[»] chr2 (26 HSPs)
chr2 (348-414)||(14941366-14941432)
chr2 (347-414)||(27847630-27847697)
chr2 (349-414)||(9723405-9723470)
chr2 (346-414)||(9293576-9293644)
chr2 (346-414)||(31174834-31174902)
chr2 (347-414)||(23268062-23268129)
chr2 (347-414)||(43330910-43330977)
chr2 (348-414)||(7475508-7475574)
chr2 (343-413)||(13354840-13354910)
chr2 (348-414)||(35160756-35160822)
chr2 (349-414)||(21936081-21936146)
chr2 (350-414)||(10661888-10661952)
chr2 (351-414)||(21393688-21393751)
chr2 (353-414)||(10662094-10662154)
chr2 (361-414)||(22591494-22591547)
chr2 (353-414)||(22592918-22592979)
chr2 (349-414)||(33380207-33380272)
chr2 (353-414)||(7475307-7475367)
chr2 (353-414)||(9293374-9293434)
chr2 (353-414)||(33380413-33380473)
chr2 (353-414)||(35160965-35161025)
chr2 (353-412)||(31174634-31174692)
chr2 (361-414)||(9723612-9723665)
chr2 (353-414)||(23267861-23267921)
chr2 (377-414)||(37335741-37335778)
chr2 (353-413)||(3989283-3989342)
[»] scaffold0178 (1 HSPs)
scaffold0178 (349-414)||(11621-11686)
[»] chr3 (42 HSPs)
chr3 (349-414)||(6041884-6041949)
chr3 (347-414)||(33113791-33113858)
chr3 (344-413)||(11347263-11347332)
chr3 (346-414)||(2754714-2754782)
chr3 (347-414)||(3574527-3574594)
chr3 (349-414)||(37217053-37217118)
chr3 (350-414)||(9797029-9797093)
chr3 (346-414)||(37522050-37522118)
chr3 (347-414)||(3137414-3137481)
chr3 (348-414)||(42297352-42297419)
chr3 (349-414)||(3456064-3456129)
chr3 (349-414)||(8362045-8362110)
chr3 (349-414)||(30385011-30385076)
chr3 (349-414)||(33145713-33145777)
chr3 (345-414)||(33839527-33839596)
chr3 (349-414)||(48160905-48160970)
chr3 (346-414)||(34482910-34482978)
chr3 (348-414)||(36865027-36865093)
chr3 (349-414)||(19650900-19650965)
chr3 (353-414)||(40328037-40328098)
chr3 (348-412)||(26612784-26612848)
chr3 (358-414)||(33839741-33839797)
chr3 (347-414)||(24343545-24343612)
chr3 (349-403)||(41224233-41224287)
chr3 (353-414)||(3137213-3137273)
chr3 (349-414)||(8320584-8320649)
chr3 (353-414)||(33145918-33145978)
chr3 (353-414)||(34482687-34482747)
chr3 (353-414)||(36864831-36864892)
chr3 (361-413)||(47738117-47738169)
chr3 (360-410)||(42921154-42921204)
chr3 (353-406)||(3456278-3456330)
chr3 (353-414)||(3574325-3574385)
chr3 (353-414)||(8361838-8361898)
chr3 (353-414)||(19650699-19650759)
chr3 (353-414)||(22426144-22426204)
chr3 (353-414)||(30385606-30385666)
chr3 (353-414)||(33114000-33114060)
chr3 (353-414)||(37522259-37522319)
chr3 (381-414)||(41883223-41883256)
chr3 (361-414)||(47738317-47738370)
chr3 (347-379)||(47402631-47402663)
[»] scaffold0471 (2 HSPs)
scaffold0471 (342-414)||(12835-12907)
scaffold0471 (353-413)||(13049-13108)
[»] chr5 (30 HSPs)
chr5 (342-414)||(2477629-2477701)
chr5 (349-414)||(12614733-12614798)
chr5 (349-414)||(17545685-17545750)
chr5 (349-414)||(22913054-22913119)
chr5 (343-414)||(4892196-4892267)
chr5 (347-414)||(6043511-6043578)
chr5 (342-412)||(3362771-3362841)
chr5 (344-414)||(8145370-8145440)
chr5 (349-414)||(4434007-4434072)
chr5 (349-414)||(11361131-11361196)
chr5 (348-412)||(38899728-38899792)
chr5 (347-414)||(14138666-14138733)
chr5 (361-414)||(10458409-10458462)
chr5 (349-414)||(25398238-25398303)
chr5 (349-414)||(33584329-33584394)
chr5 (349-412)||(12850801-12850864)
chr5 (349-414)||(37321793-37321859)
chr5 (349-414)||(3522006-3522071)
chr5 (353-403)||(27481830-27481880)
chr5 (353-414)||(4892408-4892468)
chr5 (353-414)||(33584128-33584188)
chr5 (1-38)||(39120106-39120143)
chr5 (353-412)||(3362987-3363045)
chr5 (353-412)||(12851010-12851068)
chr5 (353-412)||(38899524-38899583)
chr5 (353-414)||(3521806-3521866)
chr5 (353-414)||(6043311-6043371)
chr5 (353-414)||(8145579-8145639)
chr5 (353-414)||(25398444-25398504)
chr5 (10-42)||(38611421-38611453)
[»] chr1 (33 HSPs)
chr1 (342-414)||(16045798-16045870)
chr1 (349-412)||(32000269-32000332)
chr1 (349-414)||(40214988-40215053)
chr1 (349-414)||(44094698-44094763)
chr1 (345-414)||(27523255-27523326)
chr1 (347-414)||(25463674-25463741)
chr1 (349-414)||(6883487-6883552)
chr1 (349-414)||(9910293-9910358)
chr1 (345-414)||(40273698-40273767)
chr1 (346-414)||(18404439-18404507)
chr1 (347-414)||(19015402-19015469)
chr1 (345-414)||(3559613-3559682)
chr1 (349-414)||(36966708-36966773)
chr1 (349-414)||(37821834-37821899)
chr1 (348-398)||(34519757-34519807)
chr1 (348-414)||(41876442-41876508)
chr1 (353-414)||(25973613-25973673)
chr1 (353-414)||(37821633-37821693)
chr1 (347-414)||(25973412-25973478)
chr1 (348-386)||(51620979-51621017)
chr1 (353-411)||(52064376-52064434)
chr1 (353-414)||(19015610-19015670)
chr1 (353-414)||(51737711-51737771)
chr1 (349-413)||(44691030-44691094)
chr1 (353-403)||(6883704-6883753)
chr1 (361-414)||(9910098-9910150)
chr1 (361-414)||(19722906-19722958)
chr1 (353-414)||(20304929-20304989)
chr1 (353-414)||(36966507-36966567)
chr1 (353-414)||(40215194-40215254)
chr1 (353-402)||(41876241-41876289)
chr1 (353-414)||(44094903-44094963)
chr1 (373-414)||(44690840-44690881)
[»] chr6 (21 HSPs)
chr6 (344-414)||(18365573-18365643)
chr6 (344-414)||(18370837-18370907)
chr6 (348-414)||(33695327-33695393)
chr6 (348-414)||(33696695-33696761)
chr6 (349-414)||(17176021-17176086)
chr6 (349-414)||(17705465-17705530)
chr6 (349-414)||(25986930-25986995)
chr6 (346-414)||(11548588-11548656)
chr6 (347-414)||(6127273-6127340)
chr6 (347-414)||(23291084-23291151)
chr6 (347-414)||(28675146-28675213)
chr6 (349-414)||(6031741-6031806)
chr6 (348-413)||(18889698-18889762)
chr6 (346-414)||(9752245-9752312)
chr6 (352-414)||(8515725-8515787)
chr6 (353-413)||(32702412-32702471)
chr6 (353-414)||(17705268-17705328)
chr6 (353-414)||(28675354-28675414)
chr6 (353-413)||(29693652-29693712)
chr6 (381-414)||(29693482-29693515)
chr6 (353-414)||(34238886-34238946)
[»] scaffold0096 (1 HSPs)
scaffold0096 (346-414)||(41008-41076)
[»] scaffold0204 (1 HSPs)
scaffold0204 (345-414)||(4392-4461)
[»] scaffold0085 (1 HSPs)
scaffold0085 (349-414)||(47850-47915)
[»] scaffold0665 (1 HSPs)
scaffold0665 (350-414)||(3069-3133)
[»] scaffold0228 (5 HSPs)
scaffold0228 (360-414)||(8413-8467)
scaffold0228 (360-414)||(15995-16049)
scaffold0228 (360-414)||(25947-26001)
scaffold0228 (353-414)||(16190-16250)
scaffold0228 (353-414)||(26142-26202)
[»] scaffold0041 (1 HSPs)
scaffold0041 (369-414)||(85446-85491)


Alignment Details
Target: chr8 (Bit Score: 308; Significance: 1e-173; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 46 - 406
Target Start/End: Complemental strand, 24845230 - 24844866
Alignment:
Q  46 ctcgtttactttgttttcatcaaaatatataaggattattgttcttcaaaccaacttggttcttacactctttaccttggacaagttctttaacttgatt 145  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  24845230 ctcgtttactttgttttcataaaaatatataaggattattgttcttcaaaccaacttggttcttacaatcttgaccttggacaagttctttaacttgatt 24845131  T
Q  146 atctttcttctaaattcctctgacttcctctcattgtttga----tatttgccatttaatttttagattgtgaggtgaactttgccctaccttcaaccgt 241  Q
    ||||||||||||||||| | |||||||||||||||||||||    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24845130 atctttcttctaaattcttgtgacttcctctcattgtttgagacctatttgccatttaatttttagcttgtgaggtgaactttgccctaccttcaaccgt 24845031  T
Q  242 tcttccccactccttgtggttgatgggaattcttcctgatttgaatttggatgactaactatcatgcttatcatatgtactaggctcacttctgactaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24845030 tcttccccactccttgtggttgatgggaattcttcctgatttaaatttggatgactaactatcatgcttatcatatgtactaggctcacttctgactaac 24844931  T
Q  342 aaataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgaca 406  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  24844930 aaataaagagaaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca 24844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 31347850 - 31347782
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||    
T  31347850 aaagagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 32064742 - 32064810
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  32064742 aaagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 7017932 - 7017865
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  7017932 aagagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 26042183 - 26042116
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  26042183 aagagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 20091866 - 20091801
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  20091866 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 34665382 - 34665447
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  34665382 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 40780198 - 40780129
Alignment:
Q  345 taaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  40780198 taaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 17841918 - 17841850
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  17841918 aaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 42755109 - 42755042
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| |||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  42755109 aagagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 15187558 - 15187624
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||| |||||||||    
T  15187558 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 24211618 - 24211553
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||| ||||||||||    
T  24211618 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 32393858 - 32393923
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 37132723 - 37132658
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||| ||||||||||    
T  37132723 gagcaatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 1646033 - 1645965
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||||| ||||||| || ||||| |||||| ||||||||||    
T  1646033 aaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 27782181 - 27782117
Alignment:
Q  350 agcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||| ||||||| |||||| |||||| ||||||||| ||||||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 39772869 - 39772801
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||| |||||||||||||| ||||||| || |||| ||||||||||||||| ||||||||||    
T  39772869 aaagagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 6108300 - 6108233
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| |||||||||||||| ||||| ||||||||| || |||||||||||| ||||||||||    
T  6108300 aagagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 414
Target Start/End: Original strand, 8453837 - 8453899
Alignment:
Q  352 caatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||| ||||| | ||||||| |||||||||||||||||| |||||||    
T  8453837 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 403
Target Start/End: Complemental strand, 27835518 - 27835464
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatg 403  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  27835518 gagcaatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatg 27835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 35353041 - 35353106
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||| || |||||||||||| ||||||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 38016979 - 38017036
Alignment:
Q  357 ctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 14128865 - 14128929
Alignment:
Q  350 agcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||| ||||||| || |||| || |||||||||||| ||||||||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 37986122 - 37986055
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||| ||||||||||||||||||| ||||||| || |||| || |||||||||||| ||||||||||    
T  37986122 aagagtaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 6108032 - 6108092
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||| |||||||    
T  6108032 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 6108092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 30835111 - 30835047
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||| |||||||||||||| |||||||  | |||||||||||||||||||| ||||||||||    
T  30835111 gagcaatgttatatatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  359 atatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||| ||||| | ||||||||||||||||||| ||| ||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||| ||| ||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 25581038 - 25581098
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||| ||| |||||||    
T  25581038 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacataacacaataatc 25581098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 32065012 - 32064952
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||| ||||||||||||||| |||||||    
T  32065012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatc 32064952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 37132479 - 37132540
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||| ||||||||||||| |||||||    
T  37132479 aatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatc 37132540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 418
Target Start/End: Complemental strand, 38017199 - 38017135
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatctacc 418  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||| ||||    
T  38017199 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatttacc 38017135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  354 atgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||  |||||  ||||||| ||||||||||||||| || |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 412
Target Start/End: Original strand, 30834862 - 30834913
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||||||  ||||||| |||||| ||| |||||||||||||||||||||    
T  30834862 atatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataa 30834913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 35353300 - 35353247
Alignment:
Q  360 tatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 41819844 - 41819778
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||| |||||||||||||| ||||||| |||||   || |||||||| ||| ||||||||||    
T  41819844 agagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 3817963 - 3817930
Alignment:
Q  381 aagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||| ||||||||||||||||    
T  3817963 aagaaaaattcaagaattacatgacagaataatc 3817930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 3890649 - 3890616
Alignment:
Q  381 aagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||||||    
T  3890649 aagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 10044614 - 10044554
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  10044614 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 14129125 - 14129065
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  14129125 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatc 14129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 20091600 - 20091660
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  20091600 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 30055782 - 30055722
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| |||| |||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  30055782 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 30055722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 34665647 - 34665587
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  34665647 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 34665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 37985855 - 37985915
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  37985855 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 37985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 15329271 - 15329338
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  15329271 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 48880992 - 48880927
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  48880992 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 45637710 - 45637777
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  45637710 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 15577916 - 15577850
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  15577916 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 3961979 - 3962044
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 4974800 - 4974735
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  4974800 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 15238382 - 15238447
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||    
T  15238382 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 34482835 - 34482900
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 42611811 - 42611876
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  42611811 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 37477147 - 37477080
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||| ||||||||||    
T  37477147 aagagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 25167915 - 25167850
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| ||||||||| || |||||||||||| ||||||||||    
T  25167915 gagcaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 24394972 - 24395035
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 18036977 - 18037043
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||| |||||||||||||| ||||| | |||||||||| |||||||||||| ||||||||||    
T  18036977 agagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 35444557 - 35444623
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||| |||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  35444557 agagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 20010162 - 20010098
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| || |||| |||||||||||||| |||||||||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat-acagaataatc 20010098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 36790528 - 36790467
Alignment:
Q  352 caatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||||||||||||||||  |||||| |||||||||| |||||||||||| |||||||||    
T  36790528 caatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 29737143 - 29737204
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||| ||||| ||||||||| || ||||||||||||  |||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 35445663 - 35445603
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||| |||||| |||||||    
T  35445663 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatc 35445603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 42696081 - 42696148
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| |||||||||||||| |||||||||| ||   || |||||||||||  ||||||||||    
T  42696081 aagagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 30848835 - 30848775
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||   |||||| ||||||||||||||||||||||| || |||||||    
T  30848835 aatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatc 30848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 414
Target Start/End: Complemental strand, 40880837 - 40880792
Alignment:
Q  369 aaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  40880837 aaaaaatttatcaagaaaaactcaagaatgacatggcagaataatc 40880792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 10442859 - 10442789
Alignment:
Q  344 ataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  10442859 ataaagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 33530754 - 33530688
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  33530754 agagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 21802390 - 21802322
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  21802390 aaagagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 24128232 - 24128304
Alignment:
Q  342 aaataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  24128232 aaataaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 24392664 - 24392732
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||    
T  24392664 aaagagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 31078885 - 31078819
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  31078885 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 22199261 - 22199326
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 49387953 - 49387888
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  49387953 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 47290063 - 47290131
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  47290063 aaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 36072947 - 36073010
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||    
T  36072947 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 44893420 - 44893491
Alignment:
Q  343 aataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||||||| ||||| | || |||| ||||||||||||||| ||||||||||    
T  44893420 aataaagagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 2624837 - 2624902
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||| ||||||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 46441844 - 46441909
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| || |||||||    
T  46441844 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 4751445 - 4751509
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||||||    
T  4751445 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 7745176 - 7745112
Alignment:
Q  350 agcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 36073348 - 36073415
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||| ||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  36073348 aagaggaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 23964533 - 23964465
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||| |||||||||||||| ||||||| || |||| || |||||||||||| ||||||||||    
T  23964533 aaagagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 414
Target Start/End: Complemental strand, 50156650 - 50156578
Alignment:
Q  342 aaataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||| |||||||||||||||||| |||||| ||||| | ||||||| || |||||||||||| ||||||||||    
T  50156650 aaatcaagagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 53123029 - 53123096
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttat-taagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||| |  ||||||| ||||||||||||||| ||||||||||    
T  53123029 agagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 414
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  355 tgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||| ||| ||||||| || ||||||| |||||||||||| ||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 44893280 - 44893213
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaatt-caagaatgacatgacagaataatc 414  Q
    ||||||||||||||||| |||||| ||||| | || ||||||| ||||||||||||| ||||||||||    
T  44893280 agagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 9089136 - 9089076
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 11314050 - 11314111
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| || |||||||||||||||| |||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatc 11314111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 21802119 - 21802179
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  21802119 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 21802179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||  |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 42671927 - 42671874
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 50156386 - 50156438
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||| |||||||    
T  50156386 atatcaagaatgattttat-aagaaaaattcaagaatgacatgacataataatc 50156438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 24128505 - 24128446
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||| ||||||||||  ||||||| |||||||||| ||||||||||||||| ||||||    
T  24128505 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 24128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 36073795 - 36073743
Alignment:
Q  362 tatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| ||||||| |||||| ||| ||||||||||||||| |||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatc 36073743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 4751713 - 4751655
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||| |||||||||| |||||||| |||||||||| |||||||||||| || |||||    
T  4751713 aatgctagatatcaagaataattttat-aagaaaaatttaagaatgacatggcacaataa 4751655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 37935007 - 37934952
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatg 403  Q
    |||||||||||||||||||| ||| ||||||| || ||||  ||||||||||||||    
T  37935007 agagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatg 37934952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 403
Target Start/End: Complemental strand, 47290332 - 47290283
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatg 403  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||    
T  47290332 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatg 47290283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 10442586 - 10442646
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  10442586 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 17655458 - 17655495
Alignment:
Q  377 tattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  17655458 tattaagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 31078618 - 31078678
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| || |||||||||||||||||||| || |||||||    
T  31078618 aatgctagatatcaagaatgattttataaa-aaaaattcaagaatgacatggcacaataatc 31078678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||  ||||||| |||||| ||| |||||||||||| ||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 44893012 - 44893072
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||| |||||||||||| || |||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 44893692 - 44893632
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||| |||||||||||| || |||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 17655697 - 17655637
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||| |||| |||||  ||||||| |||||| ||| ||||||||||||||| ||||||    
T  17655697 aatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataat 17655637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 14941432 - 14941366
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  14941432 agagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 27847630 - 27847697
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  27847630 aagagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 9723405 - 9723470
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  9723405 gagcaatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 9293644 - 9293576
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||| ||||||||||    
T  9293644 aaagagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 31174902 - 31174834
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  31174902 aaagaacaatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 23268129 - 23268062
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  23268129 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 43330910 - 43330977
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||| | || |||||||||||||||||||| ||||||||||    
T  43330910 aagagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 7475574 - 7475508
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||| | ||||||| |||||||||||||||| |||||||||    
T  7475574 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 413
Target Start/End: Original strand, 13354840 - 13354910
Alignment:
Q  343 aataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||||| ||| |||||||||    
T  13354840 aataaagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 35160756 - 35160822
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  35160756 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 21936081 - 21936146
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||| ||||||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 10661888 - 10661952
Alignment:
Q  350 agcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 351 - 414
Target Start/End: Complemental strand, 21393751 - 21393688
Alignment:
Q  351 gcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||||||  |||||||||    
T  21393751 gcaatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 10662154 - 10662094
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||| |||||||    
T  10662154 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 10662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||| |||||||||| |||||||||||||||| ||| ||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 33380207 - 33380272
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||| || |||||||||||| | ||||||||    
T  33380207 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 7475307 - 7475367
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||| |||||| |||||||    
T  7475307 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatc 7475367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 9293374 - 9293434
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  9293374 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 9293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 412
Target Start/End: Original strand, 31174634 - 31174692
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||    
T  31174634 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataa 31174692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 9723665 - 9723612
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||  |||| || |||||| ||| |||||||||||||||||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatc 9723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 23267861 - 23267921
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||| |||||||||||| || |||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 37335741 - 37335778
Alignment:
Q  377 tattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  37335741 tattaagaaagattcaagaatgacatggcagaataatc 37335778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 3989342 - 3989283
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||| ||||||||||  ||||||| |||||| || |||||||||||||||| ||||||    
T  3989342 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataat 3989283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 11621 - 11686
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  11621 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 6041884 - 6041949
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 33113791 - 33113858
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||    
T  33113791 aagagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 11347263 - 11347332
Alignment:
Q  344 ataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| |||||||||    
T  11347263 ataaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 2754714 - 2754782
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  2754714 aaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 3574594 - 3574527
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  3574594 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 37217118 - 37217053
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 9797093 - 9797029
Alignment:
Q  350 agcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| |||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 37522050 - 37522118
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| ||||||||||||||| ||||| | ||||||| || |||||||||||||||||||||||    
T  37522050 aaagagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 3137481 - 3137414
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| || |||||||    
T  3137481 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 42297352 - 42297419
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgac-agaataatc 414  Q
    |||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||| |||||||||    
T  42297352 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatc 42297419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 3456064 - 3456129
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||| ||| ||||||||||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 8362110 - 8362045
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||   | | ||||||||||||||||||||||| ||||||||||    
T  8362110 gagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 30385011 - 30385076
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||| |||||||||| ||||||| ||||||| ||||| ||||||||| ||||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 33145713 - 33145777
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| |||||||||| |||| || |||||||||||| ||||||||||    
T  33145713 gagcaatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 33839527 - 33839596
Alignment:
Q  345 taaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||| ||||||| |||||| ||||||| || ||||||| |||||| ||||||||||||||||    
T  33839527 taaagagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 48160905 - 48160970
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||| ||| ||||||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 34482978 - 34482910
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||| | ||||||| ||||||||||| |||  |||||||||    
T  34482978 aaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 36865093 - 36865027
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||| ||| || ||||||||||||||| || ||||||||||||  |||||||||    
T  36865093 agagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 19650965 - 19650900
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||| ||||||| |||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  19650965 gagcaatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 26612784 - 26612848
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||||  |||||||||| ||| ||||||| || |||||||||||||||||||| ||||||||    
T  26612784 agagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  358 tatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 24343545 - 24343612
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||| | | | ||| ||||||||||    
T  24343545 aagagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 41224233 - 41224287
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatg 403  Q
    ||||| |||||||||| |||||| ||||| | |||||||||||||||||||||||    
T  41224233 gagcactgctatatattaagaaagattttctcaagaaaaattcaagaatgacatg 41224287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 8320649 - 8320584
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||| |||||||||||||| ||||||| ||||||| || |||||||| ||| || |||||||    
T  8320649 gagcaatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 33145978 - 33145918
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  33145978 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 33145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 36864831 - 36864892
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| || ||| ||||||||||||||||||| |||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 36864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||||||| ||||||| |||||| |||||||||||| ||| |||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 42921154 - 42921204
Alignment:
Q  360 tatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaat 410  Q
    |||||||||||| ||||||| ||||||| || |||||||||||||| ||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatgaccgaat 42921204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 3456330 - 3456278
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgaca 406  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||||||    
T  3456330 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgaca 3456278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 3574325 - 3574385
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| || |||||||||||||||| |||||||    
T  3574325 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatc 3574385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 8361838 - 8361898
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  |||| || |||||| ||||||||||||||||||| |||||||    
T  8361838 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatgacacaataatc 8361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 19650699 - 19650759
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| || |||||||||||||||| |||||||    
T  19650699 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatc 19650759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 22426144 - 22426204
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  22426144 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 22426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 30385666 - 30385606
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  30385666 aatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 30385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 33114060 - 33114000
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  33114060 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 33114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 37522319 - 37522259
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||| |||||||||||| || |||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 41883256 - 41883223
Alignment:
Q  381 aagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||||||    
T  41883256 aagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 47402663 - 47402631
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttat 379  Q
    ||||||||||||||||||||||||| |||||||    
T  47402663 aagagcaatgctatatatcaagaaagattttat 47402631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 12835 - 12907
Alignment:
Q  342 aaataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  12835 aaataaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 13108 - 13049
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||| ||||||||||  ||||||| |||||||||| ||||||||||||||| ||||||    
T  13108 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 13049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 2477629 - 2477701
Alignment:
Q  342 aaataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  2477629 aaataaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 12614798 - 12614733
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||    
T  12614798 gagcaatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 17545750 - 17545685
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||    
T  17545750 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 22913119 - 22913054
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 4892196 - 4892267
Alignment:
Q  343 aataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||| || |||||||||||| ||||||||||    
T  4892196 aataaagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 6043578 - 6043511
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||  |||||||||    
T  6043578 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 3362771 - 3362841
Alignment:
Q  342 aaataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||||||    
T  3362771 aaatatagagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 8145370 - 8145440
Alignment:
Q  344 ataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||| |||| |||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  8145370 ataaagaggaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 4434072 - 4434007
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||    
T  4434072 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 11361196 - 11361131
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  11361196 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 38899792 - 38899728
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||||||    
T  38899792 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 14138666 - 14138733
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| |||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||||||    
T  14138666 aagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 25398238 - 25398303
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||| || |||||||||||| ||||||||||    
T  25398238 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 33584394 - 33584329
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||| || |||||||||||| ||||||||||    
T  33584394 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 12850801 - 12850864
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||||||||||||||||||| ||||||| ||||||| | ||| ||||||||| ||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 37321859 - 37321793
Alignment:
Q  349 gagcaatgctatatatc-aagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||| |||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  37321859 gagcaatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 3522071 - 3522006
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||| |||||||||||||| ||||| | ||||||| ||||| ||||||||| ||||||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 403
Target Start/End: Original strand, 27481830 - 27481880
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatg 403  Q
    |||||||| ||| |||||| ||||||| |||||||||||||||||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatg 27481880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39120106 - 39120143
Alignment:
Q  1 ctgagtggcactacaatactgcaagtcactctgccaca 38  Q
    |||||||||||||| |||||||||||||||||||||||    
T  39120106 ctgagtggcactacgatactgcaagtcactctgccaca 39120143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 3363045 - 3362987
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||| ||||||||||  ||||||| |||||||||| ||||||||||||||| |||||    
T  3363045 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataa 3362987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 12851068 - 12851010
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||    
T  12851068 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 12851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 412
Target Start/End: Original strand, 38899524 - 38899583
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||| ||||||||||  ||||||| || |||||||||||||||||||| || |||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataa 38899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 3521806 - 3521866
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||| |||||||||||| || |||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 6043311 - 6043371
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||| |||||||||||| || |||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 8145639 - 8145579
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  8145639 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 8145579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 25398504 - 25398444
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||| ||||||||| || |||||||    
T  25398504 aatgctagatatcaagaatgattttat-aagaaaaattcaacaatgacatggcacaataatc 25398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 38611453 - 38611421
Alignment:
Q  10 actacaatactgcaagtcactctgccacaggtt 42  Q
    |||||||||| ||||||||||||||||||||||    
T  38611453 actacaatacagcaagtcactctgccacaggtt 38611421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 414
Target Start/End: Complemental strand, 16045870 - 16045798
Alignment:
Q  342 aaataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  16045870 aaataaagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 32000332 - 32000269
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataa 412  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 40214988 - 40215053
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  40214988 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 44094698 - 44094763
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  44094698 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 27523326 - 27523255
Alignment:
Q  345 taaagagcaatgctatata--tcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  27523326 taaagagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 25463674 - 25463741
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  25463674 aagagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 6883487 - 6883552
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||| ||||||||||    
T  6883487 gagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 9910358 - 9910293
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 40273698 - 40273767
Alignment:
Q  345 taaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||| || |||||||    
T  40273698 taaagagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 18404439 - 18404507
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||||| ||||||| || ||||||||||||  |||||||||    
T  18404439 aaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 19015402 - 19015469
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||| | ||||||| ||||||||||| ||| ||||||||||    
T  19015402 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 3559613 - 3559682
Alignment:
Q  345 taaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||| |||||||||||||||||||| ||||||| || |||| || |||||||||||| ||||||||||    
T  3559613 taaagaacaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 36966773 - 36966708
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||| ||||||||||| ||| ||||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 37821899 - 37821834
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||| | ||||||| ||||||||||| ||| ||||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 34519757 - 34519807
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatg 398  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| ||||    
T  34519757 agagcaatgctatatatcaagaaagattttattaagaaagattcaaaaatg 34519807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 41876508 - 41876442
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||| | || |||| || |||||||||||| ||||||||||    
T  41876508 agagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 25973673 - 25973613
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||| |||||||    
T  25973673 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 25973613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 37821633 - 37821693
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||| |||||||    
T  37821633 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 37821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 25973412 - 25973478
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||| |||||||||||||| ||||||| | ||||| ||||||||||||| | ||||||||||    
T  25973412 aagagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 51620979 - 51621017
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaa 386  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  51620979 agagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 411
Target Start/End: Original strand, 52064376 - 52064434
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaata 411  Q
    ||||||| ||||||| ||  ||||||| |||||| ||||||||||||||||||||||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaata 52064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 44691094 - 44691030
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    |||||||| | |||||||||||| ||||||| || ||| |||||||||| ||||| |||||||||    
T  44691094 gagcaatgttgtatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 403
Target Start/End: Complemental strand, 6883753 - 6883704
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatg 403  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||    
T  6883753 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatg 6883704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 9910098 - 9910150
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 19722906 - 19722958
Alignment:
Q  361 atatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  19722906 atatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 19722958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 20304929 - 20304989
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  20304929 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 36966507 - 36966567
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||| ||||| || |||||||    
T  36966507 aatgctagatatcaagaatgattttat-aagaaaaattcaagaataacatggcacaataatc 36966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 40215254 - 40215194
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||    
T  40215254 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 40215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 41876241 - 41876289
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacat 402  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||    
T  41876241 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacat 41876289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 44094963 - 44094903
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| || |||||||||||||||| |||||||    
T  44094963 aatgctagatatcaagaattattttat-aagaaagatccaagaatgacatgacacaataatc 44094903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 44690840 - 44690881
Alignment:
Q  373 attttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| |||||| |||||||||||||||| ||||||||||    
T  44690840 attttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 18365643 - 18365573
Alignment:
Q  344 ataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||||| ||||||| || |||| ||||||||||||||| ||||||||||    
T  18365643 ataaagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 18370907 - 18370837
Alignment:
Q  344 ataaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||||| ||||||| || |||| ||||||||||||||| ||||||||||    
T  18370907 ataaagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 33695393 - 33695327
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  33695393 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 33696695 - 33696761
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  33696695 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 17176086 - 17176021
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 17705530 - 17705465
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 25986930 - 25986995
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||    
T  25986930 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 11548656 - 11548588
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||| | ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  11548656 aaagagtattgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 6127273 - 6127340
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  6127273 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 23291151 - 23291084
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||    
T  23291151 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 28675146 - 28675213
Alignment:
Q  347 aagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||||||||    
T  28675146 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 6031806 - 6031741
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||| |||| || || |||| || |||||||||||||||||||||||    
T  6031806 gagcaatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 18889762 - 18889698
Alignment:
Q  348 agagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||||||||||||| |||||||||    
T  18889762 agagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 9752312 - 9752245
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||| |||||||||||||||| || || ||||||||||||||||||| ||| ||||||||||    
T  9752312 aaagagcaatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 352 - 414
Target Start/End: Complemental strand, 8515787 - 8515725
Alignment:
Q  352 caatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||| ||||||| |||| | ||| |||||||||||| ||||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 32702471 - 32702412
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||| ||||||    
T  32702471 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataat 32702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 17705268 - 17705328
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  17705268 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 17705328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 28675414 - 28675354
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||    
T  28675414 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 28675354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataat 413  Q
    ||||||| ||||||||||  ||||||| |||||| ||| |||||||||||| |||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 381 - 414
Target Start/End: Original strand, 29693482 - 29693515
Alignment:
Q  381 aagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||| |||||||||||||||||||||||||||    
T  29693482 aagaaatattcaagaatgacatgacagaataatc 29693515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 34238886 - 34238946
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||| | |||||||||||||||||| |||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaaga-ttcaagaatgacatgacacaataatc 34238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 41008 - 41076
Alignment:
Q  346 aaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||||||| ||||||| || |||| ||||||||||||||| ||||||||||    
T  41008 aaagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 4392 - 4461
Alignment:
Q  345 taaagagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||||||||||||||||||||||| ||||| | ||||||| || |||||||||||| ||||||||||    
T  4392 taaagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 47850 - 47915
Alignment:
Q  349 gagcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  47850 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 3069 - 3133
Alignment:
Q  350 agcaatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||||||||||||| ||||||| || |||| || |||||||||||| ||||||||||    
T  3069 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  360 tatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  360 tatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  360 tatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 414
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  353 aatgctatatatcaagaaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 414
Target Start/End: Original strand, 85446 - 85491
Alignment:
Q  369 aaaaattttattaagaaaaattcaagaatgacatgacagaataatc 414  Q
    ||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  85446 aaaaaatttatcaagaaaaactcaagaatgacatggcagaataatc 85491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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