View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0625_low_9 (Length: 250)
Name: NF0625_low_9
Description: NF0625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0625_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 35656173 - 35656046
Alignment:
| Q |
118 |
ctcttaaactaacggacccttaatagttgagaaaaaactcaatagtcgaataactaactagttaaaacaaaggaaagctcacctgtacgcgaggattctg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
35656173 |
ctcttaaactaacggacccttaatagttgagaaaaaactcaatagtcgaacaactaactagttaaaccaaaggaaagctcacctgtacgcgaggattctg |
35656074 |
T |
|
| Q |
218 |
aaaatcatccatggcaacagctagggct |
245 |
Q |
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|||||||||||||||| ||||||||||| |
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| T |
35656073 |
aaaatcatccatggcagcagctagggct |
35656046 |
T |
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