View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0626_low_22 (Length: 305)
Name: NF0626_low_22
Description: NF0626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0626_low_22 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 17 - 305
Target Start/End: Original strand, 31494516 - 31494804
Alignment:
| Q |
17 |
gtgtaaagcattatactatgcaagtgtatagagtgagttatctacccaaaaatataaaaaagtaatcacatagtattggatgattgataccatgactttc |
116 |
Q |
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| T |
31494516 |
gtgtaaagcattatactatgcaagtgtatagagtgagttatctacccaaaaatataaaaaagtaatcacatagtattggatgattgataccatgactttc |
31494615 |
T |
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| Q |
117 |
tctaagaattgaagttcgatttattgagcaatctattatagataaagtctaattacataaaaagttagaatttctccaatgtataatgttatattcctct |
216 |
Q |
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| T |
31494616 |
tctaagaattgaagttcgatttatagagcaatctattatagataaagtctaattccataaaaagttagaatttctccaatttataatgttatattcctct |
31494715 |
T |
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| Q |
217 |
ttagatttcttaaaaagtactcttaatacttgttagcattttccaaaaactaatcctatgggatgcacaaactcaaacatcaaattgct |
305 |
Q |
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| T |
31494716 |
ttagatttcttaaaaagtacttttaatacttgttagcattttccaaaaacaaatcctatgggatgcacaaactcaaacatcaaattgct |
31494804 |
T |
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