View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0626_low_35 (Length: 273)
Name: NF0626_low_35
Description: NF0626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0626_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 24933562 - 24933826
Alignment:
| Q |
1 |
aataggtccatatttttagatccttatacaaaaaagaatatacagcatttccaattttttgtgaaatgagctttgtcaatatagcaaaaacaagaaagtt |
100 |
Q |
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| T |
24933562 |
aataggtccatatttttagatccttatacaaaaaagaatatacagcatttccatttttttgtgaaatgagctttgtcaatatagcaagaacaagaaagtt |
24933661 |
T |
|
| Q |
101 |
ggatgggagaggtctccaactcgtacaataaaaataataacaaagtcgatcatattgttagaatatgataaaaacagcatttgtatacaatatggcatat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
24933662 |
ggatgggagaggtctccaactcgtacaataaaaataataacaaagtcgatcatattgttagaatatgataaaaacagca-ttgtatacaatatggcatat |
24933760 |
T |
|
| Q |
201 |
aaaatggaccatgacattcctttcaatacatcacaataacaacatgtataccacaaacctatgata |
266 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
24933761 |
aaaatggaccatgacattcctttcaatacatcacaataacaacatgtataccacgaacctatgata |
24933826 |
T |
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