View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0627_low_32 (Length: 265)
Name: NF0627_low_32
Description: NF0627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0627_low_32 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 998918 - 999153
Alignment:
| Q |
1 |
tagtctgaaagatgcttatgttaatagagtccctttccctcgagaaccggagagttgagataagaaaagaatnnnnnnntaaccaatcacattgatatgt |
100 |
Q |
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|
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| T |
998918 |
tagtctgaaagatgcttatgttaatagagtccctttccctcgagaaccggagagttgagataagaaaagaataaaaaaataaccaatcacattgatatgt |
999017 |
T |
|
| Q |
101 |
tatatccaaaaataaaaatacctcacaaatttctccttctgaccttcaatatactgtgacttgtaaccagaatcaaacattgtgaagaaaataacataga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
999018 |
tatatccaaaaataaaaatacctcacaaatttctccttctgaccttcaatatactgtgacttgtaaccagaatcaaacattgtgaagaaaataacataga |
999117 |
T |
|
| Q |
201 |
gatctaccagaaatactagatatgtctagcaatttc |
236 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| |
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| T |
999118 |
gatctaccagaaatactagatatgtctagcaatttc |
999153 |
T |
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