View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0628_high_3 (Length: 338)
Name: NF0628_high_3
Description: NF0628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0628_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 26 - 311
Target Start/End: Original strand, 26561873 - 26562158
Alignment:
| Q |
26 |
acataacagcagaagcaatagtgatcttgaaataaggccatatccctatgaaagctctcctagagaaacctgtccaactttccttacaagatggacttag |
125 |
Q |
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| T |
26561873 |
acataacagcagaagcaatagtgatcttgaaataaggccatatccctatgaaagctctcctagagaaacctgtccaactttccttacaagatggacttag |
26561972 |
T |
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| Q |
126 |
aagaatataaagtccattcattaatgcaaaaacccaccaagaaaaactgagtgtcaaagcagcttcaaaaactccatagcccaaaacataaatcacaacc |
225 |
Q |
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| T |
26561973 |
aagaatataaaatccattcattaatgcaaaaacccaccaagaaaaactgagagtcaaagcagcttcaaaaactccatagcccaaaacataaatcacaacc |
26562072 |
T |
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| Q |
226 |
caattgagtaatatgtgcaagcaaaacactccaaacaccatgtatgcaagagggttaactatgttttgagcttggaggaatctttg |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26562073 |
caattgagtaatatgtgcaagcaaaacactccaaacaccatgtatgcaagagggttaactatgttttgagcttggaggaatctttg |
26562158 |
T |
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