View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0628_low_2 (Length: 643)

Name: NF0628_low_2
Description: NF0628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0628_low_2
NF0628_low_2
[»] scaffold0084 (1 HSPs)
scaffold0084 (31-376)||(35993-36341)
[»] chr4 (10 HSPs)
chr4 (82-425)||(16360909-16361234)
chr4 (501-635)||(25985612-25985743)
chr4 (532-635)||(15566772-15566875)
chr4 (532-635)||(15579418-15579520)
chr4 (337-386)||(20841730-20841779)
chr4 (337-386)||(22704466-22704515)
chr4 (337-386)||(22713437-22713486)
chr4 (337-386)||(39535167-39535216)
chr4 (339-381)||(18036774-18036816)
chr4 (336-386)||(36696501-36696551)
[»] chr6 (15 HSPs)
chr6 (29-410)||(27510105-27510467)
chr6 (29-410)||(27518048-27518410)
chr6 (532-635)||(15665188-15665291)
chr6 (337-391)||(16815963-16816017)
chr6 (337-391)||(16824718-16824772)
chr6 (337-386)||(8276471-8276520)
chr6 (337-386)||(24142659-24142708)
chr6 (337-386)||(24149149-24149198)
chr6 (337-386)||(30436324-30436373)
chr6 (337-381)||(614964-615008)
chr6 (337-381)||(622885-622929)
chr6 (337-381)||(9130835-9130879)
chr6 (337-381)||(9144668-9144712)
chr6 (331-371)||(20050127-20050167)
chr6 (331-371)||(20057988-20058028)
[»] chr1 (6 HSPs)
chr1 (496-635)||(13186798-13186937)
chr1 (532-635)||(39455420-39455523)
chr1 (82-164)||(20520509-20520591)
chr1 (337-422)||(25925673-25925756)
chr1 (337-381)||(5637403-5637447)
chr1 (337-381)||(5623264-5623308)
[»] scaffold0422 (1 HSPs)
scaffold0422 (501-635)||(5387-5521)
[»] scaffold1271 (2 HSPs)
scaffold1271 (496-632)||(749-885)
scaffold1271 (82-164)||(1245-1327)
[»] scaffold0503 (2 HSPs)
scaffold0503 (501-633)||(790-920)
scaffold0503 (501-633)||(5357-5487)
[»] scaffold0458 (1 HSPs)
scaffold0458 (532-635)||(8194-8297)
[»] chr7 (3 HSPs)
chr7 (497-635)||(4892356-4892495)
chr7 (337-410)||(4892586-4892659)
chr7 (337-386)||(4848207-4848256)
[»] scaffold0014 (1 HSPs)
scaffold0014 (532-635)||(4811-4914)
[»] scaffold1575 (1 HSPs)
scaffold1575 (82-224)||(708-835)
[»] chr3 (11 HSPs)
chr3 (503-581)||(14253253-14253331)
chr3 (337-386)||(6194991-6195040)
chr3 (337-386)||(6202574-6202623)
chr3 (337-386)||(11628981-11629030)
chr3 (337-386)||(20603090-20603139)
chr3 (337-386)||(37255216-37255265)
chr3 (337-386)||(37265050-37265099)
chr3 (337-381)||(5945090-5945134)
chr3 (337-381)||(5959202-5959246)
chr3 (337-386)||(8616774-8616823)
chr3 (337-386)||(8624644-8624693)
[»] scaffold0068 (2 HSPs)
scaffold0068 (337-391)||(16893-16947)
scaffold0068 (337-391)||(24812-24866)
[»] scaffold0064 (1 HSPs)
scaffold0064 (337-391)||(8318-8372)
[»] chr5 (19 HSPs)
chr5 (337-391)||(21689044-21689098)
chr5 (337-391)||(21696963-21697017)
chr5 (337-386)||(1798448-1798497)
chr5 (337-386)||(1806190-1806239)
chr5 (337-386)||(5434810-5434859)
chr5 (337-386)||(5448630-5448679)
chr5 (337-386)||(15778759-15778808)
chr5 (337-386)||(15792994-15793043)
chr5 (337-386)||(17948940-17948989)
chr5 (337-386)||(17962830-17962879)
chr5 (337-381)||(7787333-7787377)
chr5 (337-381)||(7795183-7795227)
chr5 (337-381)||(11938747-11938791)
chr5 (337-381)||(12386447-12386491)
chr5 (337-381)||(12395140-12395184)
chr5 (337-381)||(34313377-34313421)
chr5 (318-387)||(37576663-37576732)
chr5 (318-387)||(37585775-37585844)
chr5 (337-381)||(11952671-11952715)
[»] scaffold1761 (1 HSPs)
scaffold1761 (99-154)||(803-858)
[»] scaffold0721 (1 HSPs)
scaffold0721 (337-386)||(2007-2056)
[»] scaffold0431 (1 HSPs)
scaffold0431 (337-386)||(1787-1836)
[»] chr8 (6 HSPs)
chr8 (337-386)||(18433898-18433947)
chr8 (337-386)||(23267064-23267113)
chr8 (337-386)||(39630578-39630627)
chr8 (337-386)||(39640125-39640174)
chr8 (338-387)||(15830814-15830863)
chr8 (337-381)||(12306791-12306835)
[»] scaffold0473 (1 HSPs)
scaffold0473 (341-422)||(8148-8227)
[»] scaffold0007 (1 HSPs)
scaffold0007 (318-387)||(62146-62215)
[»] chr2 (3 HSPs)
chr2 (337-386)||(12375512-12375561)
chr2 (337-386)||(12389339-12389388)
chr2 (318-367)||(19656649-19656698)
[»] scaffold0551 (1 HSPs)
scaffold0551 (337-424)||(7122-7208)
[»] scaffold0016 (1 HSPs)
scaffold0016 (318-367)||(57819-57868)


Alignment Details
Target: scaffold0084 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 31 - 376
Target Start/End: Complemental strand, 36341 - 35993
Alignment:
Q  31 gaacaagctgcagcggatcgccagaaccacataatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcaca 130  Q
    |||| ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36341 gaacgagctgcagcggatcgccggaaccactgaatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcaca 36242  T
Q  131 aggtagcaaccggagctcacaccaccgcaaacaaaaccgccgcaaatcaaccaatcgtgagcggacccaaagacaacgcaaaaggtag--tcttttttct 228  Q
    ||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||  |    
T  36241 aggcaacaaccggagctcactccaccgcaaacaaaaccgccgcaaatcaaccgatcgtgagcggacccaaagacaacgcaaaaggtagtctctttttatt 36142  T
Q  229 aattccttagatctaggtttcaatttaactgttttggaaattttgaggtcagaatcgagaagagggtgaaattttaggttagaaa-ccataaaagggaga 327  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  36141 aattctttagatctaggtttcaatttaactgttgtggaaatttcgaggtcagaatcgagaagagggtgaaattttaggttaaaaatccataaaggggaga 36042  T
Q  328 ctcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccac 376  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  36041 ctcttttgtctccggcgcggcggcgcagtcgcgatggctcgccggccac 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 6e-79; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 82 - 425
Target Start/End: Original strand, 16360909 - 16361234
Alignment:
Q  82 cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaaaaccgccgcaaatcaac 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||| |||| |||||||||||||||||||||    
T  16360909 cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggcagcgaccgaagttcacaccatcgcagacaaaaccgccgcaaatcaac 16361008  T
Q  182 caatcgtgagcggacccaaagacaacgcaaaaggtagtcttttttctaattccttagatctaggtttcaatttaactgttttggaaattttgaggtcaga 281  Q
    |             |||||       |||||||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  16361009 cg------------cccaa-------gcaaaaggtagtctctttcctaatttcttagatctaggtttcaatttaactgttgtggaatttttgaggtcaga 16361089  T
Q  282 atcgagaagagggtgaaattttaggttagaaacc---ataaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactg 378  Q
     | |||||||||||||||||| ||| |||||| |   | |||| |||||| ||||||||||||||||||||||||||||||||||||||| || |||| |    
T  16361090 tttgagaagagggtgaaattt-agggtagaaatccaaaaaaaaaggagacccttttgtctccggcgcggcggcgcagccgcgatggctcgtcggccaccg 16361188  T
Q  379 cgcaggaactccttccaccacccattctccaaatcggagaagaagaa 425  Q
    ||| |||||||| ||||||||||||||||| || |||||||||||||    
T  16361189 cgccggaactccctccaccacccattctcc-aaccggagaagaagaa 16361234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 501 - 635
Target Start/End: Original strand, 25985612 - 25985743
Alignment:
Q  501 ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc 600  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||    
T  25985612 ggtcttacaccctatatatat--ccccttcgaaccggttcggttctctggaaccgacccagggtttgaaccgaaccggccccagcctgtcctctaagtcc 25985709  T
Q  601 atttccgaatttgttcttcggcccaactctctgct 635  Q
    | ||||||| ||||||||||| |||||||||||||    
T  25985710 aattccgaaattgttcttcgg-ccaactctctgct 25985743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 532 - 635
Target Start/End: Complemental strand, 15566875 - 15566772
Alignment:
Q  532 aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc 631  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||| | ||| |||||||  ||||||||||||||||||||    
T  15566875 aaccggttcggttctctggaaccgacccaggacttgaaccgaaccggccccagtctgtcctctaggtccaattccgaaactgttcttcggcccaactctc 15566776  T
Q  632 tgct 635  Q
    ||||    
T  15566775 tgct 15566772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 532 - 635
Target Start/End: Complemental strand, 15579520 - 15579418
Alignment:
Q  532 aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc 631  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||| ||||| ||||| |||| | ||| |||||||  ||||||||||||||||||||    
T  15579520 aaccagttcggttctctggaaccgacccaggacttgaaccgaaccgg-cccagtctgtcctctaggtccaattccgaaactgttcttcggcccaactctc 15579422  T
Q  632 tgct 635  Q
    ||||    
T  15579421 tgct 15579418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 20841779 - 20841730
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  20841779 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 20841730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 22704466 - 22704515
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  22704466 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 22704515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 22713437 - 22713486
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  22713437 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 22713486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 39535167 - 39535216
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  39535167 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 39535216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 18036774 - 18036816
Alignment:
Q  339 ccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  18036774 ccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 18036816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 386
Target Start/End: Complemental strand, 36696551 - 36696501
Alignment:
Q  336 tctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||| |||||||||||| ||| |||| |||| ||||    
T  36696551 tctccggcgcggcggcgcaaccgcgatggctcaccgaccaccgcgccggaa 36696501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 3e-77; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 29 - 410
Target Start/End: Original strand, 27510105 - 27510467
Alignment:
Q  29 acgaacaagctgcagcggatcgccagaaccacataatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagca 128  Q
    |||||| ||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||| |||| |||| | |||||||||||||||||| ||||    
T  27510105 acgaacgagctgcagcggatcgccggaaccactgaatcgggttcatacaccaacagaagcaaacggacgtgtcggaaccgagtcggaacgtaccgaagca 27510204  T
Q  129 caaggtagcaaccggagctcacaccaccgcaaacaaaaccgccgcaaatcaaccaatcgtgagcggacccaaagacaacgcaaaaggtagtcttttttct 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||           | | ||||       ||||||||||||| ||||||    
T  27510205 caaggtagcgaccggagttcacaccaccgcagacaaaaccgtcgcaaatcaacc-----------gccgcaaa-------caaaaggtagtctcttttct 27510286  T
Q  229 aattccttagatctaggtttcaatttaactgttttggaaattttgaggtcagaatcgagaagagggtgaaattttaggttagaaa-ccataaaagggaga 327  Q
    || | |||||||||| ||||||||||| ||||| ||||| ||||||||| ||| | ||||||||||||||| ||||||||||||| ||| ||||   |||    
T  27510287 aacttcttagatcta-gtttcaatttagctgttgtggaatttttgaggtaagatttgagaagagggtgaaa-tttaggttagaaatccaaaaaaaaaaga 27510384  T
Q  328 ctcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaa 410  Q
    | ||||||||||| ||||||||||||||||||| ||||||| || |||| |||| |||||||| |||||||||||||||||||    
T  27510385 cccttttgtctccagcgcggcggcgcagccgcgttggctcgtcggccaccgcgccggaactccctccaccacccattctccaa 27510467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 29 - 410
Target Start/End: Original strand, 27518048 - 27518410
Alignment:
Q  29 acgaacaagctgcagcggatcgccagaaccacataatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagca 128  Q
    |||||| ||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||| |||| |||| | |||||||||||||||||| ||||    
T  27518048 acgaacgagctgcagcggatcgccggaaccactgaatcgggttcatacaccaacagaagcaaacggacgtgtcggaaccgagtcggaacgtaccgaagca 27518147  T
Q  129 caaggtagcaaccggagctcacaccaccgcaaacaaaaccgccgcaaatcaaccaatcgtgagcggacccaaagacaacgcaaaaggtagtcttttttct 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||           | | ||||       ||||||||||||| ||||||    
T  27518148 caaggtagcgaccggagttcacaccaccgcagacaaaaccgtcgcaaatcaacc-----------gccgcaaa-------caaaaggtagtctcttttct 27518229  T
Q  229 aattccttagatctaggtttcaatttaactgttttggaaattttgaggtcagaatcgagaagagggtgaaattttaggttagaaa-ccataaaagggaga 327  Q
    || | |||||||||| ||||||||||| ||||| ||||| ||||||||| ||| | ||||||||||||||| ||||||||||||| ||| ||||   |||    
T  27518230 aacttcttagatcta-gtttcaatttagctgttgtggaatttttgaggtaagatttgagaagagggtgaaa-tttaggttagaaatccaaaaaaaaaaga 27518327  T
Q  328 ctcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaa 410  Q
    | ||||||||||| ||||||||||||||||||| ||||||| || |||| |||| |||||||| |||||||||||||||||||    
T  27518328 cccttttgtctccagcgcggcggcgcagccgcgttggctcgtcggccaccgcgccggaactccctccaccacccattctccaa 27518410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 532 - 635
Target Start/End: Complemental strand, 15665291 - 15665188
Alignment:
Q  532 aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc 631  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| | ||| ||| |||  |||||||||||||||||||     
T  15665291 aaccggttcggttctttggaaccgacccaggacttgaaccgaaccggccccagcctgtcctctaggtccaattctgaaactgttcttcggcccaactctt 15665192  T
Q  632 tgct 635  Q
    ||||    
T  15665191 tgct 15665188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 16816017 - 16815963
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct 391  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  16816017 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct 16815963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 16824772 - 16824718
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct 391  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  16824772 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct 16824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 8276471 - 8276520
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  8276471 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 8276520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 24142708 - 24142659
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  24142708 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 24142659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 24149198 - 24149149
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  24149198 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 24149149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 30436373 - 30436324
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  30436373 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 30436324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 615008 - 614964
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  615008 ctccggcgcggcggcgcagccgcgatggctcgccgaccaccgcgc 614964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 622929 - 622885
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  622929 ctccggcgcggcggcgcagccgcgatggctcgccgaccaccgcgc 622885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 9130879 - 9130835
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  9130879 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 9130835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 9144712 - 9144668
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  9144712 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 9144668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 371
Target Start/End: Complemental strand, 20050167 - 20050127
Alignment:
Q  331 ttttgtctccggcgcggcggcgcagccgcgatggctcgccg 371  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20050167 ttttgtctccgacgcggcggcgcagccgcgatggctcgccg 20050127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 371
Target Start/End: Complemental strand, 20058028 - 20057988
Alignment:
Q  331 ttttgtctccggcgcggcggcgcagccgcgatggctcgccg 371  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20058028 ttttgtctccgacgcggcggcgcagccgcgatggctcgccg 20057988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 3e-56; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 496 - 635
Target Start/End: Original strand, 13186798 - 13186937
Alignment:
Q  496 aaaaaggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtcta 595  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||    
T  13186798 aaaagggtcttacaccctatatatatgtcccctccgaaccggttcggatctctgaaaccgacccaggatttgaaccgaaccggccccagcctgtcctcta 13186897  T
Q  596 agcccatttccgaatttgttcttcggcccaactctctgct 635  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  13186898 agcccaattccgaatttgttcttcggcccaactctctgct 13186937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 532 - 635
Target Start/End: Original strand, 39455420 - 39455523
Alignment:
Q  532 aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc 631  Q
    ||||||||||||||| |||||| |||||||| ||||||| ||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||    
T  39455420 aaccggttcggttctctggaactgacccagggtttgaactgaaccggccccagcctgtcctctaagtccaattccgaaattgttcttcggcccaactctc 39455519  T
Q  632 tgct 635  Q
    ||||    
T  39455520 tgct 39455523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 20520591 - 20520509
Alignment:
Q  82 cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaa 164  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||| || | |||||||  || ||| ||||| ||||||||    
T  20520591 cagaagcaaacggacgcgtcgaatccgaatcggaacgtaccggagcataaagcagcaaccaaagttcataccacggcaaacaa 20520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 422
Target Start/End: Complemental strand, 25925756 - 25925673
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaaatcggagaagaa 422  Q
    |||||||||||||| ||||||||||| |||||||| |||| |||| ||||||||  || ||| ||||||||| |||||||||||||    
T  25925756 ctccggcgcggcggagcagccgcgattgctcgccggccaccgcgccggaactccccccgcca-ccattctcc-aatcggagaagaa 25925673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 5637447 - 5637403
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  5637447 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 5637403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 5623308 - 5623264
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||    
T  5623308 ctccggcgcggcggcgcagccgcgatggttcgccggccaccgcgc 5623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 103; Significance: 6e-51; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 501 - 635
Target Start/End: Complemental strand, 5521 - 5387
Alignment:
Q  501 ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc 600  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||| |||||| ||    
T  5521 ggtcttacaccctatatatatgtccccttcgaaccggttcggtactctggaaccgacccaggacttgaaccgaactggccccagcctgtcctctaagtcc 5422  T
Q  601 atttccgaatttgttcttcggcccaactctctgct 635  Q
    | ||||||| |||||||||||||||||||||||||    
T  5421 aattccgaaattgttcttcggcccaactctctgct 5387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1271 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold1271
Description:

Target: scaffold1271; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 496 - 632
Target Start/End: Complemental strand, 885 - 749
Alignment:
Q  496 aaaaaggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtcta 595  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| || ||||    
T  885 aaaagggtcttacaccctatatatatgtccccttcgaaccggttcggttctctggaaccgacccagaatttgaaccgaaccgaccccagcctttcctcta 786  T
Q  596 agcccatttccgaatttgttcttcggcccaactctct 632  Q
    ||||||   ||||||||| |||||||| || ||||||    
T  785 agcccaacaccgaatttgctcttcggctcagctctct 749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1271; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 1327 - 1245
Alignment:
Q  82 cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaa 164  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||| | |||||||| || ||||||||| ||||||||    
T  1327 cagaagcaaaaggacgcgtcgaatccgagtcggaacgtaccggagcacaaagcagcaaccgaagttcacaccacggcaaacaa 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 501 - 633
Target Start/End: Complemental strand, 920 - 790
Alignment:
Q  501 ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc 600  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||||||| |||||  ||    
T  920 ggtcttacaccctatatatat--cccctacgaaccggttcggttctctggaaccgacctaggacttgaaccgaaccggccctagcctgtcctctaactcc 823  T
Q  601 atttccgaatttgttcttcggcccaactctctg 633  Q
    | ||||||| |||||||||||||||||||||||    
T  822 aattccgaaattgttcttcggcccaactctctg 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 501 - 633
Target Start/End: Complemental strand, 5487 - 5357
Alignment:
Q  501 ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc 600  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||||||| |||||  ||    
T  5487 ggtcttacaccctatatatat--cccctacgaaccggttcggttctctggaaccgacctaggacttgaaccgaaccggccctagcctgtcctctaactcc 5390  T
Q  601 atttccgaatttgttcttcggcccaactctctg 633  Q
    | ||||||| |||||||||||||||||||||||    
T  5389 aattccgaaattgttcttcggcccaactctctg 5357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 532 - 635
Target Start/End: Complemental strand, 8297 - 8194
Alignment:
Q  532 aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc 631  Q
    ||||||||||||||| |||||| |||||||| ||||||| ||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||    
T  8297 aaccggttcggttctctggaactgacccagggtttgaactgaaccggccccagcctgtcctctaagtccaattccgaaattgttcttcggcccaactctc 8198  T
Q  632 tgct 635  Q
    ||||    
T  8197 tgct 8194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 497 - 635
Target Start/End: Complemental strand, 4892495 - 4892356
Alignment:
Q  497 aaaaggtcttacaccctatatatatgtccccttcgaaccggttcggttcta-tggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtcta 595  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |||| |  | ||||||||| |||| ||||||| | | ||||||| |||||| ||||    
T  4892495 aaaaagtcttacaccctatatatatgtcccctttgaaccggtttggttttcctagaaccgaccaaggacttgaaccaatctggccccaacctgtcctcta 4892396  T
Q  596 agcccatttccgaatttgttcttcggcccaactctctgct 635  Q
    || ||| ||||||| |||||||||||||||||||||||||    
T  4892395 agtccaattccgaaattgttcttcggcccaactctctgct 4892356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 4892659 - 4892586
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaa 410  Q
    |||||||||||||||| |||||||||||||||||| |||| |||| |||||||  |||||||||||||||||||    
T  4892659 ctccggcgcggcggcgaagccgcgatggctcgccggccaccgcgctggaactcactccaccacccattctccaa 4892586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 4848207 - 4848256
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  4848207 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 4848256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 532 - 635
Target Start/End: Original strand, 4811 - 4914
Alignment:
Q  532 aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc 631  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| | ||| ||| |||  |||||||||||||||||||     
T  4811 aaccggttcggttctttggaaccgacccaggacttgaaccgaaccggccccagcctgtcctctaggtccaattctgaaactgttcttcggcccaactctt 4910  T
Q  632 tgct 635  Q
    ||||    
T  4911 tgct 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1575 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold1575
Description:

Target: scaffold1575; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 82 - 224
Target Start/End: Original strand, 708 - 835
Alignment:
Q  82 cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaaaaccgccgcaaatcaac 181  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||| |||| || ||||||||               ||||||||||||    
T  708 cagaagcaaacggacgcgtcgaatccgagtcggaacggaccggagcacaaggcagcgaccgaagttcacacca---------------ccgcaaatcaac 792  T
Q  182 caatcgtgagcggacccaaagacaacgcaaaaggtagtctttt 224  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  793 caatcgtgagcggacccaaagacaacgcaaaaggtagtatttt 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 503 - 581
Target Start/End: Original strand, 14253253 - 14253331
Alignment:
Q  503 tcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccc 581  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  14253253 tcttacaccctatatatatgtcccctccgaactggttcggttctttggaatcgacccatgatttaaaccgaaccggccc 14253331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 6194991 - 6195040
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  6194991 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 6195040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 6202574 - 6202623
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  6202574 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 6202623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 11629030 - 11628981
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  11629030 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 11628981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 20603139 - 20603090
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  20603139 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 20603090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 37255265 - 37255216
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  37255265 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 37255216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 37265099 - 37265050
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  37265099 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 37265050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 5945134 - 5945090
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  5945134 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 5945090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 5959246 - 5959202
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  5959246 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 5959202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 8616774 - 8616823
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| ||||    
T  8616774 ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgccggaa 8616823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 8624644 - 8624693
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| ||||    
T  8624644 ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgctggaa 8624693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 16947 - 16893
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct 391  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  16947 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct 16893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 24866 - 24812
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct 391  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  24866 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct 24812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 8372 - 8318
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct 391  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  8372 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct 8318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Original strand, 21689044 - 21689098
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct 391  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  21689044 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct 21689098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Original strand, 21696963 - 21697017
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct 391  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  21696963 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct 21697017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 1798448 - 1798497
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  1798448 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 1798497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 1806190 - 1806239
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  1806190 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 1806239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 5434859 - 5434810
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  5434859 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 5434810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 5448679 - 5448630
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  5448679 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 5448630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 15778808 - 15778759
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  15778808 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 15778759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 15793043 - 15792994
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  15793043 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 15792994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 17948940 - 17948989
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  17948940 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 17948989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 17962830 - 17962879
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  17962830 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 17962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Original strand, 7787333 - 7787377
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  7787333 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 7787377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Original strand, 7795183 - 7795227
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  7795183 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 7795227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 11938791 - 11938747
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  11938791 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 11938747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 12386491 - 12386447
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  12386491 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 12386447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 12395184 - 12395140
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  12395184 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 12395140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 34313421 - 34313377
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  34313421 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc 34313377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 387
Target Start/End: Original strand, 37576663 - 37576732
Alignment:
Q  318 aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac 387  Q
    |||| |||||| ||||  |||||||||||||||||||||||| ||||||| ||| |||| |||| |||||    
T  37576663 aaaaaggagacgctttcatctccggcgcggcggcgcagccgctatggctcaccggccaccgcgccggaac 37576732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 387
Target Start/End: Original strand, 37585775 - 37585844
Alignment:
Q  318 aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac 387  Q
    |||| |||||| ||||  |||||||||||||||||||||||| ||||||| ||| |||| |||| |||||    
T  37585775 aaaaaggagacgctttcatctccggcgcggcggcgcagccgctatggctcaccggccaccgcgccggaac 37585844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 11952715 - 11952671
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    |||||||||||||||||||||||||||||| |||| |||| ||||    
T  11952715 ctccggcgcggcggcgcagccgcgatggcttgccggccaccgcgc 11952671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1761 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1761
Description:

Target: scaffold1761; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 858 - 803
Alignment:
Q  99 gtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacacca 154  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  858 gtcgaagctgagacggaacgtaccggagcacaaggtagcgaccggagttcacacca 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 2056 - 2007
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  2056 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 2007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 1836 - 1787
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  1836 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 1787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 18433898 - 18433947
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  18433898 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 18433947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 23267113 - 23267064
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  23267113 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 23267064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 39630627 - 39630578
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  39630627 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 39630578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 39640174 - 39640125
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  39640174 ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa 39640125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 15830814 - 15830863
Alignment:
Q  338 tccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac 387  Q
    |||||||||||||||||||||||||||||| ||| |||| |||| |||||    
T  15830814 tccggcgcggcggcgcagccgcgatggctcaccgaccaccgcgccggaac 15830863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 12306835 - 12306791
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc 381  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||||    
T  12306835 ctccggcgcggcggcgcagccgctatggctcgccggccaccgcgc 12306791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 8227 - 8148
Alignment:
Q  341 ggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaaatcggagaagaa 422  Q
    |||||||||||||||||||||||||||| || |||| || | ||||  || ||| ||||||||||||| |||||||||||||    
T  8227 ggcgcggcggcgcagccgcgatggctcgacggccaccgcaccggaa-accctccgccacccattctcc-aatcggagaagaa 8148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 387
Target Start/End: Original strand, 62146 - 62215
Alignment:
Q  318 aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac 387  Q
    ||||||||||  ||||  ||||||||||||||||||||||| |||||||| ||| |||| |||| |||||    
T  62146 aaaagggagaaactttcatctccggcgcggcggcgcagccgtgatggctcaccggccaccgcgccggaac 62215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 12375512 - 12375561
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| ||||    
T  12375512 ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgccggaa 12375561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 12389339 - 12389388
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa 386  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| ||||    
T  12389339 ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgccggaa 12389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 19656698 - 19656649
Alignment:
Q  318 aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctc 367  Q
    |||| |||||| ||||  ||||||||||||||||||||||||||||||||    
T  19656698 aaaaaggagacactttcatctccggcgcggcggcgcagccgcgatggctc 19656649  T

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Target: scaffold0551 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 424
Target Start/End: Complemental strand, 7208 - 7122
Alignment:
Q  337 ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactc-cttccaccacccattctccaaatcggagaagaaga 424  Q
    |||||| |||||||||  ||||||||||||||||| |||| || | |||| || |||| ||||||  ||||||| ||||||||||||||    
T  7208 ctccggtgcggcggcggcgccgcgatggctcgccggccaccgcaccggaagtcgcttcgaccacc--ttctccacatcggagaagaaga 7122  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 57868 - 57819
Alignment:
Q  318 aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctc 367  Q
    ||||| ||||| ||||  |||||||||||||||||||||||| |||||||    
T  57868 aaaagagagacactttcatctccggcgcggcggcgcagccgcaatggctc 57819  T

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