View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0629_low_2 (Length: 527)

Name: NF0629_low_2
Description: NF0629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0629_low_2
NF0629_low_2
[»] chr6 (45 HSPs)
chr6 (30-518)||(2112171-2112663)
chr6 (30-136)||(281841-281948)
chr6 (61-143)||(4420645-4420727)
chr6 (30-134)||(28660755-28660860)
chr6 (47-143)||(2117391-2117487)
chr6 (72-136)||(33080571-33080635)
chr6 (48-150)||(30523649-30523750)
chr6 (47-140)||(9667974-9668067)
chr6 (47-140)||(10616530-10616623)
chr6 (58-139)||(20377910-20377991)
chr6 (31-135)||(25100014-25100119)
chr6 (91-143)||(8010389-8010441)
chr6 (66-133)||(6647394-6647461)
chr6 (30-116)||(31671087-31671174)
chr6 (58-125)||(33067157-33067224)
chr6 (47-140)||(2023558-2023652)
chr6 (30-139)||(4006684-4006794)
chr6 (65-139)||(7931716-7931790)
chr6 (79-137)||(24745439-24745497)
chr6 (47-140)||(4246398-4246491)
chr6 (90-135)||(6536978-6537023)
chr6 (90-139)||(30863277-30863326)
chr6 (47-139)||(3181059-3181150)
chr6 (67-139)||(3528811-3528883)
chr6 (47-139)||(8035138-8035230)
chr6 (61-169)||(10476082-10476189)
chr6 (79-139)||(10616703-10616763)
chr6 (47-139)||(34403843-34403935)
chr6 (76-140)||(740875-740941)
chr6 (47-82)||(5623144-5623179)
chr6 (47-141)||(7785732-7785824)
chr6 (30-88)||(9093597-9093656)
chr6 (61-116)||(14706776-14706831)
chr6 (52-143)||(19275622-19275713)
chr6 (30-176)||(32975948-32976095)
chr6 (47-133)||(7446327-7446413)
chr6 (31-76)||(7485121-7485167)
chr6 (30-139)||(33089476-33089586)
chr6 (92-133)||(821458-821499)
chr6 (115-188)||(4331013-4331086)
chr6 (30-101)||(1402966-1403038)
chr6 (107-139)||(4080964-4080996)
chr6 (59-139)||(20368170-20368250)
chr6 (30-93)||(20671901-20671965)
chr6 (47-103)||(24838769-24838825)
[»] chr5 (50 HSPs)
chr5 (30-136)||(4855668-4855775)
chr5 (48-140)||(15003503-15003595)
chr5 (47-139)||(12459991-12460083)
chr5 (65-196)||(37611148-37611279)
chr5 (65-196)||(37787878-37788009)
chr5 (30-143)||(10272417-10272531)
chr5 (58-139)||(15402819-15402900)
chr5 (58-139)||(17368675-17368756)
chr5 (51-140)||(34205231-34205322)
chr5 (30-136)||(35960384-35960490)
chr5 (30-139)||(41534412-41534519)
chr5 (47-139)||(40205064-40205154)
chr5 (30-139)||(2568627-2568738)
chr5 (30-101)||(12595768-12595840)
chr5 (51-135)||(32194073-32194157)
chr5 (47-118)||(19369301-19369372)
chr5 (47-137)||(37690628-37690719)
chr5 (30-140)||(41957440-41957551)
chr5 (47-133)||(2569691-2569777)
chr5 (59-133)||(18543193-18543266)
chr5 (58-132)||(33533536-33533610)
chr5 (47-137)||(37526191-37526281)
chr5 (47-137)||(37588352-37588442)
chr5 (43-76)||(14961916-14961949)
chr5 (60-133)||(17258879-17258952)
chr5 (51-140)||(18704025-18704114)
chr5 (47-124)||(29054896-29054973)
chr5 (58-139)||(34690872-34690953)
chr5 (30-140)||(9202736-9202848)
chr5 (47-139)||(13604839-13604931)
chr5 (47-132)||(19138714-19138801)
chr5 (58-126)||(30217081-30217149)
chr5 (33-119)||(7319379-7319466)
chr5 (30-140)||(7674618-7674729)
chr5 (65-140)||(12242699-12242774)
chr5 (98-193)||(15405948-15406043)
chr5 (59-118)||(29659351-29659410)
chr5 (30-105)||(39257411-39257486)
chr5 (65-187)||(11457105-11457226)
chr5 (30-119)||(12425541-12425631)
chr5 (90-140)||(17369428-17369478)
chr5 (69-119)||(38104867-38104917)
chr5 (59-133)||(40534199-40534273)
chr5 (47-139)||(10125708-10125801)
chr5 (59-132)||(11707055-11707128)
chr5 (66-131)||(36638754-36638819)
chr5 (98-139)||(41830891-41830932)
chr5 (120-196)||(7856601-7856676)
chr5 (30-133)||(28586762-28586866)
chr5 (33-81)||(41419294-41419342)
[»] chr3 (65 HSPs)
chr3 (45-187)||(43115042-43115184)
chr3 (52-139)||(54837024-54837111)
chr3 (30-131)||(33883748-33883849)
chr3 (31-139)||(50952304-50952413)
chr3 (30-134)||(53848058-53848162)
chr3 (29-139)||(21367636-21367748)
chr3 (33-133)||(39602206-39602306)
chr3 (30-140)||(36646371-36646482)
chr3 (30-103)||(10101502-10101576)
chr3 (30-103)||(10212427-10212501)
chr3 (28-132)||(20669586-20669692)
chr3 (30-139)||(21574461-21574570)
chr3 (66-140)||(37273141-37273215)
chr3 (47-127)||(2318632-2318713)
chr3 (30-138)||(10357403-10357512)
chr3 (66-143)||(31010409-31010486)
chr3 (59-131)||(20669172-20669244)
chr3 (47-119)||(27792860-27792932)
chr3 (34-140)||(41724185-41724293)
chr3 (59-130)||(40665429-40665500)
chr3 (30-132)||(45432936-45433039)
chr3 (69-139)||(2152168-2152238)
chr3 (30-139)||(19679318-19679428)
chr3 (47-129)||(22214659-22214741)
chr3 (66-140)||(30923887-30923961)
chr3 (91-140)||(1810009-1810058)
chr3 (52-133)||(24785198-24785279)
chr3 (30-135)||(33405160-33405267)
chr3 (90-139)||(42745069-42745118)
chr3 (31-139)||(52618974-52619083)
chr3 (30-133)||(12923321-12923425)
chr3 (47-139)||(14548711-14548803)
chr3 (51-139)||(40880938-40881026)
chr3 (59-143)||(43875465-43875549)
chr3 (66-142)||(54180767-54180843)
chr3 (53-140)||(26808184-26808271)
chr3 (52-143)||(33725860-33725951)
chr3 (49-125)||(43875638-43875716)
chr3 (97-139)||(1833764-1833806)
chr3 (66-132)||(13709820-13709886)
chr3 (30-75)||(22214735-22214781)
chr3 (69-139)||(23793594-23793663)
chr3 (30-139)||(36139848-36139958)
chr3 (97-139)||(36200134-36200176)
chr3 (90-140)||(50004683-50004733)
chr3 (107-140)||(3044248-3044281)
chr3 (29-81)||(10540540-10540593)
chr3 (107-188)||(27294394-27294475)
chr3 (98-139)||(47249476-47249517)
chr3 (52-125)||(47319275-47319348)
chr3 (78-139)||(47513672-47513733)
chr3 (59-135)||(1816583-1816659)
chr3 (107-139)||(21754765-21754797)
chr3 (47-127)||(21862177-21862257)
chr3 (58-122)||(28622006-28622070)
chr3 (59-139)||(31710877-31710957)
chr3 (59-139)||(31711132-31711212)
chr3 (55-131)||(34924536-34924612)
chr3 (30-81)||(36783382-36783434)
chr3 (59-135)||(36887504-36887580)
chr3 (59-139)||(41644435-41644515)
chr3 (73-141)||(49586924-49586992)
chr3 (51-103)||(51510219-51510271)
chr3 (59-143)||(52412890-52412974)
chr3 (58-142)||(53891880-53891964)
[»] chr1 (83 HSPs)
chr1 (30-132)||(30257653-30257756)
chr1 (30-139)||(31517730-31517840)
chr1 (30-132)||(25479551-25479654)
chr1 (30-141)||(30371118-30371230)
chr1 (47-126)||(23902070-23902149)
chr1 (63-139)||(4699605-4699681)
chr1 (47-140)||(28689441-28689536)
chr1 (47-126)||(12564877-12564956)
chr1 (50-133)||(27887114-27887197)
chr1 (30-139)||(7218064-7218174)
chr1 (47-133)||(10199404-10199490)
chr1 (30-187)||(15581224-15581382)
chr1 (63-140)||(19412586-19412663)
chr1 (31-139)||(37842345-37842454)
chr1 (72-137)||(46252674-46252739)
chr1 (61-141)||(3223670-3223749)
chr1 (30-133)||(17269220-17269324)
chr1 (51-139)||(24675986-24676074)
chr1 (34-140)||(17628573-17628680)
chr1 (30-84)||(25006079-25006134)
chr1 (66-125)||(28077073-28077132)
chr1 (58-125)||(35351038-35351105)
chr1 (47-125)||(6659502-6659580)
chr1 (49-143)||(39347953-39348047)
chr1 (30-111)||(49888737-49888819)
chr1 (51-140)||(2234731-2234819)
chr1 (52-133)||(7136994-7137075)
chr1 (58-139)||(10744300-10744381)
chr1 (59-140)||(27140478-27140559)
chr1 (61-138)||(27963361-27963438)
chr1 (47-196)||(28482166-28482315)
chr1 (47-140)||(29007705-29007798)
chr1 (52-133)||(34290229-34290310)
chr1 (47-139)||(37241811-37241904)
chr1 (47-139)||(3924612-3924704)
chr1 (59-139)||(6292493-6292573)
chr1 (51-131)||(14629964-14630044)
chr1 (59-127)||(15558217-15558285)
chr1 (49-133)||(24460403-24460487)
chr1 (30-152)||(30259463-30259587)
chr1 (29-76)||(40394938-40394986)
chr1 (87-142)||(42397752-42397808)
chr1 (46-133)||(3319929-3320015)
chr1 (47-146)||(6231799-6231898)
chr1 (59-118)||(11129245-11129304)
chr1 (46-133)||(12564495-12564582)
chr1 (31-133)||(34405128-34405231)
chr1 (47-139)||(35925674-35925770)
chr1 (33-87)||(37295760-37295815)
chr1 (52-139)||(38247043-38247130)
chr1 (108-143)||(43532593-43532628)
chr1 (30-144)||(45205038-45205153)
chr1 (44-198)||(6981477-6981631)
chr1 (60-133)||(12593449-12593522)
chr1 (62-140)||(15437966-15438044)
chr1 (66-139)||(15942737-15942811)
chr1 (70-140)||(26184759-26184829)
chr1 (93-135)||(34278687-34278729)
chr1 (51-121)||(42556639-42556709)
chr1 (51-140)||(4549222-4549311)
chr1 (30-94)||(5421955-5422020)
chr1 (55-132)||(16981933-16982010)
chr1 (47-96)||(25005830-25005879)
chr1 (107-140)||(26185559-26185592)
chr1 (47-140)||(30285879-30285972)
chr1 (98-143)||(37941971-37942016)
chr1 (107-139)||(3070080-3070112)
chr1 (47-151)||(4622081-4622185)
chr1 (107-135)||(5276341-5276369)
chr1 (30-120)||(5592694-5592785)
chr1 (108-140)||(6976973-6977005)
chr1 (32-139)||(7262508-7262616)
chr1 (47-139)||(15515529-15515621)
chr1 (92-140)||(15579515-15579563)
chr1 (30-81)||(27738228-27738280)
chr1 (91-139)||(31118075-31118123)
chr1 (53-137)||(31294513-31294597)
chr1 (33-140)||(33723371-33723479)
chr1 (47-103)||(33976674-33976730)
chr1 (69-137)||(37593676-37593744)
chr1 (107-139)||(38170680-38170712)
chr1 (47-83)||(47413330-47413366)
chr1 (107-135)||(47917284-47917312)
[»] chr4 (36 HSPs)
chr4 (53-139)||(1137706-1137792)
chr4 (30-120)||(49219109-49219200)
chr4 (47-140)||(24929481-24929574)
chr4 (30-140)||(29263340-29263451)
chr4 (47-139)||(23819077-23819169)
chr4 (30-77)||(6927545-6927593)
chr4 (59-143)||(11264301-11264385)
chr4 (47-131)||(30207569-30207653)
chr4 (30-196)||(2996543-2996710)
chr4 (52-130)||(7694009-7694087)
chr4 (37-139)||(8468926-8469028)
chr4 (121-187)||(12816997-12817063)
chr4 (30-139)||(20936219-20936329)
chr4 (66-139)||(46110210-46110283)
chr4 (30-125)||(17884038-17884134)
chr4 (30-88)||(437473-437532)
chr4 (107-146)||(2225623-2225662)
chr4 (52-139)||(6466036-6466123)
chr4 (30-84)||(27043875-27043930)
chr4 (52-135)||(42121481-42121563)
chr4 (30-104)||(56480318-56480393)
chr4 (59-113)||(11158373-11158427)
chr4 (47-81)||(11842203-11842237)
chr4 (58-132)||(34398682-34398756)
chr4 (93-135)||(46201382-46201424)
chr4 (66-140)||(53673647-53673721)
chr4 (61-127)||(55084483-55084549)
chr4 (58-140)||(24370940-24371024)
chr4 (48-125)||(35405936-35406013)
chr4 (47-103)||(2900328-2900384)
chr4 (63-139)||(30631960-30632036)
chr4 (51-139)||(33534159-33534247)
chr4 (47-103)||(36048521-36048577)
chr4 (92-132)||(36463131-36463171)
chr4 (47-75)||(44019513-44019541)
chr4 (59-139)||(46415782-46415862)
[»] chr2 (57 HSPs)
chr2 (66-143)||(32821816-32821893)
chr2 (30-139)||(29316765-29316875)
chr2 (29-128)||(3235385-3235484)
chr2 (30-140)||(14666518-14666629)
chr2 (34-140)||(43141845-43141952)
chr2 (31-140)||(30552632-30552742)
chr2 (30-133)||(37766768-37766873)
chr2 (29-139)||(9174784-9174896)
chr2 (30-137)||(33942120-33942228)
chr2 (68-143)||(34652022-34652097)
chr2 (78-140)||(41809234-41809296)
chr2 (51-128)||(39236496-39236573)
chr2 (62-139)||(43065440-43065517)
chr2 (35-135)||(43910993-43911094)
chr2 (47-127)||(22681187-22681267)
chr2 (68-139)||(41817177-41817248)
chr2 (58-140)||(9878671-9878753)
chr2 (58-132)||(16867738-16867812)
chr2 (31-84)||(18066099-18066153)
chr2 (46-135)||(10285847-10285936)
chr2 (30-82)||(11513868-11513921)
chr2 (47-140)||(14299620-14299713)
chr2 (90-187)||(16551782-16551879)
chr2 (90-139)||(28677649-28677698)
chr2 (98-143)||(30538159-30538204)
chr2 (66-139)||(35379006-35379079)
chr2 (30-82)||(43199384-43199437)
chr2 (31-133)||(1625871-1625975)
chr2 (30-136)||(3673777-3673885)
chr2 (47-103)||(15780065-15780121)
chr2 (59-139)||(28933824-28933903)
chr2 (68-139)||(787341-787412)
chr2 (51-134)||(6227743-6227826)
chr2 (58-133)||(12147456-12147531)
chr2 (84-143)||(31739958-31740017)
chr2 (30-136)||(35485887-35485994)
chr2 (47-130)||(39983330-39983413)
chr2 (90-140)||(1160660-1160710)
chr2 (30-139)||(5133742-5133852)
chr2 (30-139)||(8017404-8017514)
chr2 (29-74)||(9750915-9750961)
chr2 (30-139)||(28039322-28039432)
chr2 (92-145)||(33525951-33526004)
chr2 (80-133)||(35557121-35557174)
chr2 (98-139)||(45314907-45314948)
chr2 (107-139)||(1056119-1056151)
chr2 (35-135)||(1893275-1893375)
chr2 (66-138)||(1939323-1939395)
chr2 (47-75)||(4550765-4550793)
chr2 (61-133)||(5826219-5826291)
chr2 (107-143)||(19977995-19978031)
chr2 (30-133)||(29300615-29300719)
chr2 (51-95)||(29510584-29510628)
chr2 (107-139)||(32614938-32614970)
chr2 (47-139)||(40158706-40158798)
chr2 (68-132)||(44443330-44443394)
chr2 (107-139)||(44606100-44606132)
[»] chr7 (51 HSPs)
chr7 (32-132)||(44151477-44151578)
chr7 (52-140)||(3610729-3610817)
chr7 (49-169)||(20553093-20553213)
chr7 (66-188)||(7244687-7244810)
chr7 (47-121)||(27378836-27378910)
chr7 (52-125)||(2825235-2825308)
chr7 (59-176)||(4966156-4966273)
chr7 (108-176)||(36537957-36538025)
chr7 (47-127)||(38010702-38010782)
chr7 (61-140)||(9423583-9423662)
chr7 (30-104)||(30456475-30456550)
chr7 (47-143)||(11208437-11208530)
chr7 (59-129)||(24363601-24363671)
chr7 (31-80)||(25296955-25297005)
chr7 (79-133)||(35267382-35267436)
chr7 (90-140)||(39568313-39568363)
chr7 (53-139)||(39771755-39771841)
chr7 (30-143)||(48157106-48157220)
chr7 (66-143)||(42281500-42281577)
chr7 (59-139)||(19719007-19719086)
chr7 (47-139)||(25670576-25670668)
chr7 (91-139)||(28844522-28844570)
chr7 (29-132)||(37064218-37064324)
chr7 (68-140)||(45859516-45859587)
chr7 (107-142)||(8341876-8341911)
chr7 (66-169)||(9038119-9038221)
chr7 (84-143)||(12234875-12234934)
chr7 (59-126)||(15075088-15075155)
chr7 (30-84)||(22296273-22296328)
chr7 (66-188)||(33645901-33646023)
chr7 (68-158)||(39630603-39630694)
chr7 (30-116)||(44910574-44910661)
chr7 (47-139)||(46082022-46082116)
chr7 (30-138)||(46825068-46825179)
chr7 (78-140)||(941559-941621)
chr7 (30-139)||(12110330-12110440)
chr7 (36-85)||(20881680-20881730)
chr7 (97-139)||(20888384-20888426)
chr7 (30-119)||(22283754-22283844)
chr7 (55-129)||(47559601-47559675)
chr7 (47-140)||(3500956-3501048)
chr7 (47-76)||(9527143-9527172)
chr7 (31-95)||(28340878-28340943)
chr7 (59-140)||(39360023-39360104)
chr7 (30-126)||(39907773-39907870)
chr7 (30-103)||(44241830-44241903)
chr7 (107-139)||(1645690-1645722)
chr7 (107-139)||(11048075-11048107)
chr7 (108-140)||(21247975-21248007)
chr7 (107-151)||(29290381-29290425)
chr7 (47-139)||(30535551-30535643)
[»] scaffold0024 (1 HSPs)
scaffold0024 (30-133)||(27546-27650)
[»] chr8 (48 HSPs)
chr8 (30-140)||(4558768-4558879)
chr8 (65-133)||(2458562-2458630)
chr8 (30-109)||(10437855-10437934)
chr8 (57-140)||(38561724-38561807)
chr8 (30-140)||(39551198-39551309)
chr8 (30-139)||(2594987-2595097)
chr8 (47-142)||(43704363-43704460)
chr8 (66-139)||(779051-779124)
chr8 (66-143)||(4055602-4055679)
chr8 (62-139)||(7918436-7918513)
chr8 (47-139)||(29973069-29973162)
chr8 (52-120)||(8062322-8062390)
chr8 (28-76)||(11059748-11059796)
chr8 (47-131)||(28769337-28769421)
chr8 (47-140)||(39866723-39866818)
chr8 (30-129)||(41336645-41336745)
chr8 (79-139)||(41606893-41606953)
chr8 (68-135)||(14949875-14949942)
chr8 (51-130)||(30389091-30389170)
chr8 (30-88)||(34770862-34770921)
chr8 (68-127)||(42215084-42215143)
chr8 (93-139)||(3254259-3254305)
chr8 (107-141)||(4281594-4281628)
chr8 (30-103)||(6509329-6509403)
chr8 (30-124)||(9956819-9956912)
chr8 (59-169)||(11569417-11569527)
chr8 (65-139)||(12851182-12851256)
chr8 (30-83)||(16210932-16210986)
chr8 (50-140)||(30191130-30191220)
chr8 (66-140)||(30259121-30259195)
chr8 (59-133)||(30277241-30277315)
chr8 (47-140)||(7714230-7714323)
chr8 (47-84)||(9834834-9834871)
chr8 (98-135)||(10358617-10358654)
chr8 (59-140)||(11185221-11185302)
chr8 (62-139)||(30918116-30918192)
chr8 (107-187)||(1561325-1561405)
chr8 (107-139)||(4390261-4390293)
chr8 (30-113)||(7918789-7918873)
chr8 (59-123)||(8060669-8060733)
chr8 (29-88)||(8062493-8062553)
chr8 (107-139)||(8629504-8629536)
chr8 (90-138)||(13000415-13000463)
chr8 (92-140)||(25869255-25869303)
chr8 (68-132)||(28784793-28784856)
chr8 (47-135)||(29417698-29417786)
chr8 (58-102)||(30627929-30627973)
chr8 (52-136)||(31862486-31862570)
[»] scaffold0147 (1 HSPs)
scaffold0147 (78-140)||(12693-12755)
[»] scaffold0153 (2 HSPs)
scaffold0153 (90-143)||(6480-6533)
scaffold0153 (90-143)||(13500-13553)
[»] scaffold0003 (1 HSPs)
scaffold0003 (62-140)||(306329-306407)
[»] scaffold0311 (1 HSPs)
scaffold0311 (87-139)||(10607-10659)


Alignment Details
Target: chr6 (Bit Score: 391; Significance: 0; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 30 - 518
Target Start/End: Original strand, 2112171 - 2112663
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2112171 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 2112270  T
Q  130 taagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataaatttaaataggtctttatatctaagaatctagcttaagatca 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2112271 taagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataaatttaaataggtctttatatctaagaatctagcttaagatca 2112370  T
Q  230 catgcttggagtcactgattatggattcattttctttttgaaatgattttgcaactggctcttcacgtagactttcgaatgtataattaaattacnnnnn 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||         
T  2112371 catgcttggagtcactgattatggattcattttctttttgaaatgattttgcaactggctcttcacatagactttcgaatgtataattaaattacttttt 2112470  T
Q  330 nngaaactaaactaactgtttattt-caaat-----aaggcatagataacattgaatgaaacggttgttccacctttgagactaaatctttagaggtagt 423  Q
      |||||||||| |||||||||||| |||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2112471 ttgaaactaaaccaactgtttattttcaaatgtatgaaggcatagataacattgaatgaaacggttgttccacctttgagactaaatctttagacgtagt 2112570  T
Q  424 tttaaaaacatctttaattttattgttagtaagatatggctacaaagtttccatcgtcatataacaatgactaatctttgtcggagaacctatga 518  Q
    ||||||||||||||||||||  || || ||| ||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||    
T  2112571 tttaaaaacatctttaattt--ttttttgtatgatatgggtacaaagtttccaccatcacataacaatgactaatctttgtcggagaacttatga 2112663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 281948 - 281841
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| || |||||| ||||||| ||||||| ||| ||||||| ||||| ||||| ||| || ||||||| | |||||||||||||  |||||||    
T  281948 aaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtc 281849  T
Q  129 ataagttg 136  Q
    ||||||||    
T  281848 ataagttg 281841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 4420645 - 4420727
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| ||||| ||| ||||||| ||| |||||| ||||||| | ||||||| |||||||||||||||||| ||||||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctat 4420727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 28660860 - 28660755
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||||||||| ||| |||||||| ||||| |||||||||||||||||| |  |  |||||| ||||  ||| |||||||| |||| ||||||||    
T  28660860 aaaataaagttaaattattttcatataaattataaattgttttcataaactatccttaaaagcttatggaaactaactgaaaacaatttataaacatgtc 28660761  T
Q  129 ataagt 134  Q
    ||||||    
T  28660760 ataagt 28660755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 2117391 - 2117487
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||||||| |||||||||||||||||||  |||| ||||| |||||| ||||||| |  |||||| |||||  ||||| ||||| ||||||||||    
T  2117391 tttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaacagcttatagacatgccataaattgtttctat 2117487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 33080635 - 33080571
Alignment:
Q  72 cataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttg 136  Q
    ||||||||||| | ||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  33080635 cataaactatcctggagagcttatagaaataaactgaaaataacttataaacatgtcataagttg 33080571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 30523649 - 30523750
Alignment:
Q  48 ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgaga 147  Q
    ||||||||| ||||||||| ||||||||| ||||| | ||| | |||||||||| |   ||||||| |||||||||||| ||||||||||||| || |||    
T  30523649 ttcatataagctataagtt-ttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccataaga 30523747  T
Q  148 tct 150  Q
    |||    
T  30523748 tct 30523750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 9668067 - 9667974
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||| ||| || ||||||||||||||| | |  ||| |||||| |||||||   ||||||| |||||| |||||||||||||||||||    
T  9668067 tttcatataagctacaatttgttttcataaactgtttcggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 9667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 10616623 - 10616530
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||| ||||||  ||||| |||| |||| || ||| ||||||| |||||| | ||| |||||||| | |||||||||||||||||||    
T  10616623 tttcatataaaatataagccgttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagttgtttc 10616530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 20377991 - 20377910
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||||||| | ||| || || ||||   ||||||| |||||||||||||||  ||||||||||||||||||    
T  20377991 ctataagttgttttcataatccatcctatagagctttgggaaataagccgaaaacaacttatagacatgtcataagttgttt 20377910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 25100014 - 25100119
Alignment:
Q  31 aaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    ||||| ||| ||||||||| |||| ||  |||||||||||||||||| |||||||| || ||||||||||||||   ||||| | |  ||||||||||||    
T  25100014 aaatagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataagttgaaaatagcaaatgaacatgtca 25100113  T
Q  130 taagtt 135  Q
    ||||||    
T  25100114 taagtt 25100119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 8010389 - 8010441
Alignment:
Q  91 cttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||||||||||| ||||| | |||||||||||||||| ||||||||||||    
T  8010389 cttatagaaataaactgaaaatagcttatgaacatgtcatgagttgtttctat 8010441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 6647394 - 6647461
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||||||||| ||||||||||| ||||||  ||||||   ||||||| |||||||||||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 31671174 - 31671087
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaact 116  Q
    |||| |||||||||||| |||||||||| ||||||| ||||||| ||||||||| ||||  ||||||  |||||| | ||||||||||    
T  31671174 aaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaacaact 31671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 33067157 - 33067224
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    ||||||||||||||||||| ||||||| ||| |||| ||||||||||| |||||| | ||||| ||||    
T  33067157 ctataagttgttttcataagctatcttggagagcttgtagaaataaactgaaaacgatttatggacat 33067224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 2023558 - 2023652
Alignment:
Q  47 tttcatataaactataagttgttttc-ataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||| ||||||| | ||||| ||||||| |||| ||| |||||||||||||| | |||||||  || ||| || |||||||||||||||    
T  2023558 tttcatataagctataagctattttctataaactttcttggagagcttatagaaataagctgaaaacagtttgtgatcaggtcataagttgtttc 2023652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 4006684 - 4006794
Alignment:
Q  30 aaaataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| |||||||||  |||||| ||||||||||||||||||| |||||   ||| | ||||  |||||| | ||||| |||||||| |||| ||    
T  4006684 aaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacatatc 4006783  T
Q  129 ataagttgttt 139  Q
     ||||||||||    
T  4006784 gtaagttgttt 4006794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 7931790 - 7931716
Alignment:
Q  65 ttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||| || ||||| || || |||||  ||||||| | |||||||||||| ||||||||||||||||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttt 7931716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 24745439 - 24745497
Alignment:
Q  79 tatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 137  Q
    |||||||||| |||| || |||||| ||||||||||||||||||  |||||||||||||    
T  24745439 tatcttagagagcttgtaaaaataagccgaaaacaacttatgaaggtgtcataagttgt 24745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 4246398 - 4246491
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||| ||||||| ||||||||||| ||||  | ||| || |||| ||||||   ||||||| |||||| ||||||||| |||||||||    
T  4246398 tttcatataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgtttc 4246491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 6536978 - 6537023
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||    
T  6536978 gcttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 30863277 - 30863326
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| ||| | |||||||||||||| ||||||||||||||||||    
T  30863277 gcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgttt 30863326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 3181150 - 3181059
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||| ||||  |||||||||||  |||||| ||| ||| || ||||||| ||| ||| ||||||| ||||| |||||||||||||    
T  3181150 tttcatataaaccataaactgttttcataagttatcttggagagct-attgaaataagccggaaataacttataaacatttcataagttgttt 3181059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 3528811 - 3528883
Alignment:
Q  67 gttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||| ||||||||| ||| ||||||  ||||||   |||||||| ||||| ||||||||||||||||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgttt 3528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 8035230 - 8035138
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| ||| |||||||||||||||  |||| ||||  |||||   ||||||   |||||||| |||||| |||||||||||||||||    
T  8035230 tttcatataagctagaagttgttttcataagttatcctagaaagcttacgaaaataagttgaaaacaagttatgaccatgtcataagttgttt 8035138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 10476189 - 10476082
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaat 160  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||| | |||||||| ||| || |||||||| || |||||| || || |||  | |||| |    
T  10476189 taagttgttttcataagctatcttggagagct-atagaaataagctgaaaacaatttacgagcatgtcattagatgtttccataagctctcataaacagt 10476091  T
Q  161 ctcagaagt 169  Q
    |||||||||    
T  10476090 ctcagaagt 10476082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 10616763 - 10616703
Alignment:
Q  79 tatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||   ||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  10616763 tatcttagaggatttataaaaataaactgaaaacagcttatgaacatgtcataaggtgttt 10616703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 34403843 - 34403935
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||| | ||||| ||||||||||| || |  || || |||||| |||||||   ||||||| |||||||||||||||||||||||||    
T  34403843 tttcgtataatcgataagatgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttt 34403935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 740941 - 740875
Alignment:
Q  76 aactatcttagagtgcttatagaaataaa--ccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||| | ||| ||||||||||||| |  | ||||| ||||||||||||||||||||||||||||    
T  740941 aactatcctggagagcttatagaaatatatgctgaaaataacttatgaacatgtcataagttgtttc 740875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 5623144 - 5623179
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatc 82  Q
    |||||||||||||||||||||||||||||| |||||    
T  5623144 tttcatataaactataagttgttttcataagctatc 5623179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 7785824 - 7785732
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttct 141  Q
    |||||||||| |||||| |||| |||||   |||| || ||| |||||| ||||||| | |||||||||||||  |||||||||||| |||||||    
T  7785824 tttcatataagctataaattgtcttcatg--ctattttggagagcttatggaaataagctgaaaacaacttatagacatgtcataagctgtttct 7785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 9093656 - 9093597
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagag 88  Q
    |||||||||||||||||||| | ||||| ||||||| ||||||||||| || ||||||||    
T  9093656 aaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagag 9093597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 14706776 - 14706831
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaact 116  Q
    |||| ||||||||  ||||||| | ||||||||||| |||||||||||||||||||    
T  14706776 taagctgttttcacgaactatcctggagtgcttataaaaataaaccgaaaacaact 14706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 19275713 - 19275622
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||| |||||||  ||||||||||| ||||| |  || |||||| |||||||||||||| || ||| || ||||||||||| || |||||||    
T  19275713 tatatactataaactgttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataaattatttctat 19275622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 32975948 - 32976095
Alignment:
Q  30 aaaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| ||||||| || || | ||||||||||||||||| ||||| | || || ||||||||  |  | ||||||| |||||| | |||||    
T  32975948 aaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctatcctggaatgattatagaagcacgctgaaaacagcttatggaaatgtc 32976047  T
Q  129 ataagttgtttctatgagatcttttgaacaatctcagaagtatttatg 176  Q
    ||||| ||||||||| || ||||   |||| ||||| ||||| |||||    
T  32976048 ataagctgtttctataagctcttccaaacagtctcacaagtacttatg 32976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 7446413 - 7446327
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||||||| | ||||| ||||||||||| |||||| || | ||||||  |||||| | ||||||||||||| ||| ||| |||||    
T  7446413 tttcatataagccataagctgttttcataagctatctcagggggcttatgaaaataacctgaaaacaacttataaacgtgtgataag 7446327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 7485167 - 7485121
Alignment:
Q  31 aaataaagttaaattgttt-catataaactataagttgttttcataa 76  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  7485167 aaataaagttaaatttttttcatataagctataagttgttttcataa 7485121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 33089476 - 33089586
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||||||||||||||  || ||||| ||||  ||||||||||| ||||||| | | || |||  |||||| |  |||||||||||| ||||||||    
T  33089476 aaaataaagttaaattgtttatatctaaacgataaactgttttcataagctatcttggggagcctatgaaaataagcgtaaaacaacttataaacatgtc 33089575  T
Q  129 ataagttgttt 139  Q
     |||| |||||    
T  33089576 ctaagctgttt 33089586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 821458 - 821499
Alignment:
Q  92 ttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||||||||| | |||||| ||||||||||||||||||||    
T  821458 ttatagaaataagctgaaaacgacttatgaacatgtcataag 821499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 4331086 - 4331013
Alignment:
Q  115 cttatgaacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataaa 188  Q
    |||||| ||||||| |||| | ||||| | || |||||| |||||||||| ||||  |||||||||||||||||    
T  4331086 cttatggacatgtcttaagctatttctctaagttcttttaaacaatctcacaagtgcttatgtcaatagataaa 4331013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 1402966 - 1403038
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaat 101  Q
    |||||||||||||| | ||| ||||||| |||||| |||||||||||| ||||| | |||  |||||||||||    
T  1402966 aaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttatagaaat 1403038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 4080964 - 4080996
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||||||||| ||||||||||||    
T  4080964 gaaaacaacttatgaacatggcataagttgttt 4080996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 20368250 - 20368170
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||||||| || |||| |||  |||||  ||||||   ||||  | |||||||||||||||||||||||||    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttt 20368170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 20671965 - 20671901
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgctt 93  Q
    |||||||||| ||||||||| | ||||| || ||| |||||||||||||||||| ||||| ||||    
T  20671965 aaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatcatagagagctt 20671901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 24838825 - 24838769
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    |||||||||| ||||||| || |||||||| ||||| | ||| ||||||||||||||    
T  24838825 tttcatataagctataagctgatttcataagctatcatggagagcttatagaaataa 24838769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 4855668 - 4855775
Alignment:
Q  30 aaaataaagttaaattgtt-tcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||  | || ||||| |||||||| ||||||||| ||| ||||||||||    
T  4855668 aaaataaagttaaattgttatcatataagttataagttgttttcataaactatcccaaagagcttacagaaataagccgaaaacagcttctgaacatgtc 4855767  T
Q  129 ataagttg 136  Q
    ||||||||    
T  4855768 ataagttg 4855775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 15003595 - 15003503
Alignment:
Q  48 ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||| |||||||| |||||||||| |||||  |||| |||||| |||||||| ||||||||||||| ||||||||| |||||||||||    
T  15003595 ttcatataagctataagtggttttcataagctatccaagagagcttatggaaataaatcgaaaacaacttacgaacatgtcgtaagttgtttc 15003503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 12460083 - 12459991
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||| |||||||||||||||| |||| || |||||||  || ||||||  |||||| || |||||||| |||||||||||||||||||||||    
T  12460083 tttcaaataaactataagttgtcttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttt 12459991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 37611279 - 37611148
Alignment:
Q  65 ttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctca 164  Q
    |||||||||||| ||||||| ||| |||||| ||||||| | ||||||| ||||||||||||||| |||||||||  || || ||| |  ||||||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctca 37611180  T
Q  165 gaagtatttatgtcaatagataaatttaaata 196  Q
     ||||| || || || ||||||| || |||||    
T  37611179 caagtacttgtgccagtagataagttcaaata 37611148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 37788009 - 37787878
Alignment:
Q  65 ttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctca 164  Q
    |||||||||||| ||||||| ||| |||||| ||||||| | ||||||| ||||||||||||||| |||||||||  || || ||| |  ||||||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctca 37787910  T
Q  165 gaagtatttatgtcaatagataaatttaaata 196  Q
     ||||| || || || ||||||| || |||||    
T  37787909 caagtacttgtgccagtagataagttcaaata 37787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 10272531 - 10272417
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||| |||| ||||||||| | ||||| ||||||||||||||||||| | ||||| ||| | ||||  |||||| | ||||||||||||   |||||||    
T  10272531 aaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtc 10272432  T
Q  129 ataagttgtttctat 143  Q
    |||||||||||||||    
T  10272431 ataagttgtttctat 10272417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 15402900 - 15402819
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||||||| |||| ||||||  | ||||||||| | | ||||||||||||||||||| |||||| ||||||    
T  15402900 ctataagttgttttcataacctattttagagaacgtatagaaattagctgaaaacaacttatgaacatatcataatttgttt 15402819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 17368675 - 17368756
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||||||| ||||||| ||| | |||| ||||||| | ||||||  | |||||||||||||||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttt 17368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 34205231 - 34205322
Alignment:
Q  51 atataaactataagttgttttcataaactatctt-agagtgcttatagaaataaacc-gaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| ||||||||||||||||||| ||||||| | |  |||||| ||||||||   |||||||||||||||||||| |||||||||||||    
T  34205231 atataagctataagttgttttcataagctatcttgaaaaagcttatggaaataaatgtgaaaacaacttatgaacatgacataagttgtttc 34205322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 35960384 - 35960490
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    |||||||||| ||| | ||||||||||||||||||||| |||||||| ||||| | ||  || || |||||||| |  |||||| |||||| |||||||     
T  35960384 aaaataaagtcaaactatttcatataaactataagttgatttcataagctatcctggaaagcgtaaagaaataagctaaaaacatcttatggacatgtcg 35960483  T
Q  130 taagttg 136  Q
    |||||||    
T  35960484 taagttg 35960490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 41534412 - 41534519
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    ||||||||| |||||||||||||  || ||||||||||||||||||| |||| || |||  |||  |||||||| | ||||||| |||||||||  ||||    
T  41534412 aaaataaagctaaattgtttcatggaagctataagttgttttcataagctatttttgagaacttgaagaaataatctgaaaacagcttatgaac--gtca 41534509  T
Q  130 taagttgttt 139  Q
    |||| |||||    
T  41534510 taagctgttt 41534519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 40205154 - 40205064
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||  |||||||||||||| ||||| | ||| |||||||||||||| | |||||||  ||||| |||||| ||||| |||||    
T  40205154 tttcatataaacta--agttgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataagctgttt 40205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 2568627 - 2568738
Alignment:
Q  30 aaaataaagttaaattgttt--catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    |||| |||||||||||||||  | ||||| ||||||||||||||||||| ||||| | ||| ||| ||  |||||| |  |||| |||||||||| ||||    
T  2568627 aaaacaaagttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgt 2568726  T
Q  128 cataagttgttt 139  Q
    |||||| |||||    
T  2568727 cataagctgttt 2568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 12595840 - 12595768
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaat 101  Q
    |||||||||||||||||||| |||||||||||| || || |||||||| ||| |||| || ||||||||||||    
T  12595840 aaaataaagttaaattgttttcatataaactatgagctggtttcataagctaccttaaagagcttatagaaat 12595768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 32194157 - 32194073
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    |||||| ||||||| ||||||  ||| ||||||| ||| ||||||| |||||| | |||||||||||||| | ||||||||||||    
T  32194157 atataagctataagatgtttttttaagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 32194073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 19369301 - 19369372
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaactta 118  Q
    |||||||||||||||||| || ||||||||||| ||  |||| |||||||||||||||  ||||||| ||||    
T  19369301 tttcatataaactataagctggtttcataaactttcccagagagcttatagaaataaattgaaaacagctta 19369372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 37690719 - 37690628
Alignment:
Q  47 tttcatataaactataagttgttttcataaa-ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 137  Q
    |||||||||| ||||||||||||||||||||  |||  | ||| |||||| ||||||| | ||||||| ||||| ||||||||||| |||||    
T  37690719 tttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgt 37690628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 41957551 - 41957440
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||| |||||||||||||| ||| |||  |||||| ||||||||||| ||||| | |||  |||||  ||||||   |||||||||||||| |||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtc 41957452  T
Q  129 ataagttgtttc 140  Q
    ||||| ||||||    
T  41957451 ataagctgtttc 41957440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 2569777 - 2569691
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||||||| ||||||| ||||||||||||||||| || |  ||||||  | ||||||  |||||| |||||| ||||||||||||    
T  2569777 tttcatataatctataagctgttttcataaactatcataaaaagcttatgaatataaacttaaaacagcttatggacatgtcataag 2569691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 18543266 - 18543193
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||||||||||||||| ||||| | ||| |||||| ||||||| | |||||||||| ||| ||||||||||||    
T  18543266 tataagttgttttcataagctatcctggagagcttat-gaaataagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 33533610 - 33533536
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||||| |||||||| || ||||||| ||| |||||| |||||||   |||||||||||||||| |||||||||    
T  33533610 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 33533536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 37526281 - 37526191
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 137  Q
    |||||||||| |||||||||||||||||||  | |  | ||| |||||| ||||||| | ||||||| ||||| ||||||||||| |||||    
T  37526281 tttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgt 37526191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 37588442 - 37588352
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 137  Q
    |||||||||| |||||||||||||||||||  |||  | ||| |||||| ||||||| | ||||||| ||||| ||||| ||||| |||||    
T  37588442 tttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcataggttgt 37588352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 14961916 - 14961949
Alignment:
Q  43 attgtttcatataaactataagttgttttcataa 76  Q
    ||||||||||||||||||||||||||||||||||    
T  14961916 attgtttcatataaactataagttgttttcataa 14961949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 17258952 - 17258879
Alignment:
Q  60 ataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||| ||||||||||||||||| |  || ||||||  |||||| | ||||||| |||||||||||||||||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 18704114 - 18704025
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| ||||||||||||||||||| ||||   | ||  ||||| ||||||| | |||||||||||||  |||||| ||||||||||||    
T  18704114 atataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttatagacatgttataagttgtttc 18704025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 29054896 - 29054973
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaaca 124  Q
    |||||||||| ||||||||||||| ||||||||||| |  || |||||| ||||||||  | | ||||||||||||||    
T  29054896 tttcatataagctataagttgtttccataaactatcatgtagagcttatggaaataaattgtacacaacttatgaaca 29054973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 34690872 - 34690953
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||| |||||| | ||||| ||| |||||| |||||||  ||| ||||||||||| |||||||| || ||||||    
T  34690872 ctataagttgttctcataagccatcttggagagcttatggaaataagtcgataacaacttatggacatgtcacaatttgttt 34690953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 9202848 - 9202736
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaac-atgt 127  Q
    ||||||||||||||||| |||||||||| | ||||| |||||||||||  ||||||  ||  |||||  |||||| | | ||||| ||||||||| ||||    
T  9202848 aaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgt 9202749  T
Q  128 cataagttgtttc 140  Q
    |||||| ||||||    
T  9202748 cataagctgtttc 9202736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 13604931 - 13604839
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||| |||| |||||||||||  ||||||  || ||||||  ||||||   ||||||||| |||| |||||||||||| |||||    
T  13604931 tttcatataaactttaagctgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttt 13604839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 19138801 - 19138714
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatctta--gagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||| |||| ||||||||||||||||||| ||||  ||  ||| |||||| ||||||| | |||||||| ||||| |||||||||||    
T  19138801 tttcagataagctataagttgttttcataagctattatatggagagcttatggaaataagctgaaaacaatttatgtacatgtcataa 19138714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 30217081 - 30217149
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatg 126  Q
    ||||||| || |||||||| ||||| | ||| |||||| |||||||||| ||||||||||||| |||||    
T  30217081 ctataagctgctttcataagctatcctggagagcttatggaaataaacctaaaacaacttatggacatg 30217149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 7319379 - 7319466
Alignment:
Q  33 ataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttat 119  Q
    |||||||||||||| |||||||||| ||||||  ||||||| ||| ||||||| |||  |||||| |||||| | |||| ||||||||    
T  7319379 ataaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaagcaacttat 7319466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 7674618 - 7674729
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||| ||||||||||| | ||||| | ||||  ||||||||||| ||||||| |||   || |  |||||| | ||||||| ||||| ||||||||    
T  7674618 aaaataaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtc 7674717  T
Q  129 ataagttgtttc 140  Q
    ||||||||||||    
T  7674718 ataagttgtttc 7674729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 12242774 - 12242699
Alignment:
Q  65 ttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||| ||||||| ||| |||||| ||| ||| | |||||||||| |||  ||||||||||||| ||||    
T  12242774 ttgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttc 12242699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 15406043 - 15405948
Alignment:
Q  98 aaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataaatttaa 193  Q
    |||||||  ||||||| ||||||||||||||||||| |||||   | || |||| |||||  ||||| |||| ||||| ||||||||||| |||||    
T  15406043 aaataaattgaaaacagcttatgaacatgtcataagctgttttggtaagttcttctgaaccgtctcaaaagtgtttatatcaatagataagtttaa 15405948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 29659351 - 29659410
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaactta 118  Q
    ||||||||||||||||||  |||||||||| | ||||| |||||| | ||||||||||||    
T  29659351 tataagttgttttcataagttatcttagagagtttatataaataagctgaaaacaactta 29659410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 39257486 - 39257411
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaac 105  Q
    |||||||||| |||   |||||||||||||||||||||||||||||| | ||| | ||| |||||| || ||||||    
T  39257486 aaaataaagtcaaaccttttcatataaactataagttgttttcataagcaatcatggagagcttattgatataaac 39257411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 11457105 - 11457226
Alignment:
Q  65 ttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctca 164  Q
    ||||||||| ||  |||||| ||| ||||||||||||||   |||| || |||||| ||||||||||||||||||| || || ||||   |||| |||||    
T  11457105 ttgttttcaaaagttatcttggagagcttatagaaataatatgaaa-cagcttatggacatgtcataagttgtttccataagctcttcaaaacagtctca 11457203  T
Q  165 gaagtatttatgtcaatagataa 187  Q
     |||| ||| || ||||||||||    
T  11457204 caagtgtttctgccaatagataa 11457226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 12425541 - 12425631
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttat 119  Q
    |||||||||||||||||||| | ||||| ||||||| |||||||| || ||||||| |||  |||||  ||||||   |||||||||||||    
T  12425541 aaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttat 12425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 17369478 - 17369428
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||||| | |||||||||||||  |||||||||||| ||||||    
T  17369478 gcttatagaaataatctgaaaacaacttatagacatgtcataagctgtttc 17369428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 38104917 - 38104867
Alignment:
Q  69 tttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttat 119  Q
    |||||||| ||||||||||| |||||| ||||||| | |||||||||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaacttat 38104867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 40534199 - 40534273
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||||||||||||||| |||||  |||| |||||| ||| |||   |||||| | ||||||||||||||||||    
T  40534199 tataagttgttttcataagctatcccagagagcttatggaagtaagatgaaaactaattatgaacatgtcataag 40534273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 10125801 - 10125708
Alignment:
Q  47 tttcatataaactat-aagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| |||||||||| ||||| |||||||||  || | | ||| ||||||  |||||| | ||||||| ||||| |||||||||||||||||||    
T  10125801 tttcttataaactattaagttattttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgttt 10125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 11707055 - 11707128
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    |||||| ||||||||||| |||||||  || |||| |  |||||| | ||||||||||||| ||||||||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 36638754 - 36638819
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcata 131  Q
    |||||||||||  |||| ||||| |||||| ||||||| | ||||| | |||||||||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcata 36638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 41830891 - 41830932
Alignment:
Q  98 aaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||| ||||||||| |||||||| ||||||||||||||    
T  41830891 aaataaacggaaaacaacatatgaacacgtcataagttgttt 41830932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 7856601 - 7856676
Alignment:
Q  120 gaacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataaatttaaata 196  Q
    |||||||||||||||||||| ||| || || ||| |||||||||  |||| ||| |||||||| ||||||| |||||    
T  7856601 gaacatgtcataagttgtttttataagttc-tttaaacaatctcgcaagtgtttttgtcaataaataaattcaaata 7856676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 28586866 - 28586762
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| ||||| |||||||| |||||| |||||| |  | ||||| ||||| |||||| ||||||| | ||||||| |||| | | |||||    
T  28586866 aaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctgaaaacagcttacggatatgtc 28586767  T
Q  129 ataag 133  Q
    |||||    
T  28586766 ataag 28586762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 41419294 - 41419342
Alignment:
Q  33 ataaagttaaattgtttcatataaactataagttgttttcataaactat 81  Q
    |||||| |||||||| |||| ||| ||||||||||||||||||| ||||    
T  41419294 ataaagctaaattgtatcatgtaagctataagttgttttcataagctat 41419342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 9e-25; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 45 - 187
Target Start/End: Original strand, 43115042 - 43115184
Alignment:
Q  45 tgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatg 144  Q
    ||||| |||||| ||||||||||||||||| ||||||| | ||| |||||| ||||||| | |||||||| ||||| ||||||||||||||||||| ||     
T  43115042 tgttttatataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccata 43115141  T
Q  145 agatcttttgaacaatctcagaagtatttatgtcaatagataa 187  Q
    |  ||||   |||||||||| ||||  ||||||||||||||||    
T  43115142 aactcttccaaacaatctcacaagtgattatgtcaatagataa 43115184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 54837111 - 54837024
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||| |||||| ||||||||| ||||||| ||  ||||||| |||||| | |||||||| |||||||||||||||||| |||||    
T  54837111 tataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctgttt 54837024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 33883849 - 33883748
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    |||||||||||| | | |||  ||| ||||||| ||||||| ||||| |||||||||||  |||||  |||||| | |||||||||||||||||||||||    
T  33883849 aaaataaagttacaattttttgtatgaactatatgttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtca 33883750  T
Q  130 ta 131  Q
    ||    
T  33883749 ta 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 50952304 - 50952413
Alignment:
Q  31 aaataaagttaaattgtttcatataaactata-agttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    |||||||||||| |  |||||||||| ||||| ||||||| | |||||||||||| ||| |||||| ||||||| |  ||||||  ||||||||||||||    
T  50952304 aaataaagttaattgttttcatataagctatatagttgttgtaataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtca 50952403  T
Q  130 taagttgttt 139  Q
    |||| |||||    
T  50952404 taagctgttt 50952413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 53848162 - 53848058
Alignment:
Q  30 aaaataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| |||||||||  |||||| ||| | ||| |||||||||||||||  |||| |||||||||||||| ||||||||| |||||| |||||||    
T  53848162 aaaataaagtcaaattgttttgatataagctaca-gttattttcataaactatcccagagagcttatagaaataagccgaaaacagcttatggacatgtc 53848064  T
Q  129 ataagt 134  Q
    | ||||    
T  53848063 acaagt 53848058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 21367636 - 21367748
Alignment:
Q  29 aaaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaac-atg 126  Q
    ||||||||||||||||||||| | |||||  |||||||||||||||||| ||||||| |||  |||||  |||||| | ||||||| ||| ||||| |||    
T  21367636 aaaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatg 21367735  T
Q  127 tcataagttgttt 139  Q
    ||||||| |||||    
T  21367736 tcataagctgttt 21367748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 39602306 - 39602206
Alignment:
Q  33 ataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    |||||||||||||||| | |||||  |||||| ||||||||||| ||||||| |||  |||||  ||||||   |||||||| |||||||||||||||||    
T  39602306 ataaagttaaattgttgcgtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataa 39602207  T
Q  133 g 133  Q
    |    
T  39602206 g 39602206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 36646482 - 36646371
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||||  |||||||| |||||||  ||||| |||||||||||| ||||| ||||| | ||||||||||||   ||||||| |||||| ||||| |    
T  36646482 aaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgcc 36646383  T
Q  129 ataagttgtttc 140  Q
    |||||| |||||    
T  36646382 ataagtggtttc 36646371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 10101576 - 10101502
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    |||||||||||||||||||| |||||||  || ||||||||||||||| |  |||||||| ||||||||||||||    
T  10101576 aaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttatagaaataa 10101502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 10212501 - 10212427
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    |||||||||||||||||||| |||||||  || ||||||||||||||| |  |||||||| ||||||||||||||    
T  10212501 aaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttatagaaataa 10212427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 20669586 - 20669692
Alignment:
Q  28 caaaaata-aagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    |||||||| |||||||||||||| ||||||| |||||| | |||||||||||||||||||||| |||  |  |||||||| ||||||| | |||| ||||    
T  20669586 caaaaatacaagttaaattgttttcatataagctataattcgttttcataaactatcttagagagctcctgaaaataaactgaaaacaccctatggacat 20669685  T
Q  126 gtcataa 132  Q
     ||||||    
T  20669686 atcataa 20669692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 21574461 - 21574570
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||||||||||||| ||||||| |||||| || |||| |||| ||| | | ||| |||||| ||||||| |  ||| || ||||||||||||||    
T  21574461 aaaataaagttaaattgtttacatataagctataacttttttt-ataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtc 21574559  T
Q  129 ataagttgttt 139  Q
    |||||||||||    
T  21574560 ataagttgttt 21574570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 37273141 - 37273215
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||| ||||||| |||  ||||| |||||||   |||||||||||||| |||||||||||||||||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttc 37273215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 2318632 - 2318713
Alignment:
Q  47 tttcatataaactataagttgttttcataaacta-tcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    ||||||||||||||||||||||||| ||||  || |||| ||| |||||||||||||| | ||||||||||| ||| |||||    
T  2318632 tttcatataaactataagttgtttttataagttattcttggagagcttatagaaataagctgaaaacaacttctgaccatgt 2318713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 10357403 - 10357512
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||| |||||||| ||| |||||||  || ||||||||||||||| | ||||||||| |||||  |||||||  |||||| | |||||  |||||||    
T  10357403 aaaataatgttaaatttttttcatataagatacaagttgttttcataagccatcttagagagcttactgaaataactcgaaaatagcttatatacatgtc 10357502  T
Q  129 ataagttgtt 138  Q
    ||||||||||    
T  10357503 ataagttgtt 10357512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 31010409 - 31010486
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||| ||| ||||| ||||| |||||| ||| ||| | ||||||| |||||| ||||||||||||||||||||||    
T  31010409 tgttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctat 31010486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 20669172 - 20669244
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcata 131  Q
    |||||| ||||||||||| ||||||| ||| ||||||  |||||| | ||||||| |||||||||||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 27792860 - 27792932
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttat 119  Q
    |||||||||| ||  ||||||||||||||||||||| |  || |||||||||||||| | |||||||||||||    
T  27792860 tttcatataagctgcaagttgttttcataaactatcatgtagagcttatagaaataagctgaaaacaacttat 27792932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 41724185 - 41724293
Alignment:
Q  34 taaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaa-taaaccgaaaacaacttatgaacatgtcata 131  Q
    |||| |||||||| ||| |||||| ||||||  ||||||||| | ||||| | ||| ||||||| ||| ||| | |||||||||||||| ||||||||||    
T  41724185 taaatttaaattggttttatataagctataaactgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcata 41724284  T
Q  132 agttgtttc 140  Q
    |||||||||    
T  41724285 agttgtttc 41724293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 40665429 - 40665500
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcat 130  Q
    |||||| |||||||||||  |||||| ||| ||||||| |||||| | ||||||| ||||||||||||||||    
T  40665429 tataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 45433039 - 45432936
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||| |||||||||||||| ||||| | |||||| ||||||||| ||   ||| |  || |||||| ||||||| | ||||||||||||||||||||||    
T  45433039 aaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaacttatgaacatgtc 45432940  T
Q  129 ataa 132  Q
    ||||    
T  45432939 ataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 2152238 - 2152168
Alignment:
Q  69 tttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||| | ||| ||||||||||| ||   ||||||| |||| ||||||||||||||||||||    
T  2152238 tttcataaactatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttt 2152168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 19679428 - 19679318
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| ||||| | ||||| |||||||||||||| |||||||||||| ||| | | | |||||||| | | ||||| ||| | | ||||||    
T  19679428 aaaataaagtcaaactgttttcttataagctataagttgtttttataaactatcttggagagttaaaagaaataagctgcaaacagctttttagcatgtc 19679329  T
Q  129 ataagttgttt 139  Q
    |||||||||||    
T  19679328 ataagttgttt 19679318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 22214741 - 22214659
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    |||||||||| ||||||||||||||||||| ||||| |||||   |||  ||||||| | ||||||| |||||| ||||||||    
T  22214741 tttcatataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtca 22214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 30923961 - 30923887
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||| ||||| ||||| | |||||||||||| | ||||||| |||||  |||||||||||| ||||||    
T  30923961 tgttttcataacctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttc 30923887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 1810009 - 1810058
Alignment:
Q  91 cttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||||| | |||||||||| ||| |||||||||||||||||||    
T  1810009 cttatagaaataagcagaaaacaactcatggacatgtcataagttgtttc 1810058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 24785198 - 24785279
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||| ||||||  ||||||||||| ||||| | ||| ||||||  |||||| |  ||||||||||||||||||||||||||    
T  24785198 tataatctataacgtgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 33405267 - 33405160
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaa--taaaccgaaaacaacttatgaacatg 126  Q
    ||||||||||||| |||||| ||||||| ||||||| ||||||||||| |||||||  ||  ||||| ||||  ||| |||||||||  ||||||||||     
T  33405267 aaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttat-gaaagttaagccgaaaacagtttatgaacata 33405169  T
Q  127 tcataagtt 135  Q
    |||||||||    
T  33405168 tcataagtt 33405160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 42745069 - 42745118
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| |||||||   |||||||||||||||||||||||||||||||||    
T  42745069 gcttatggaaataagatgaaaacaacttatgaacatgtcataagttgttt 42745118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 52618974 - 52619083
Alignment:
Q  31 aaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    ||||||||||||||||||| |||||||  |||||| |||||||| || |||||||  || |||| |  ||||||   ||||| | |||||||||||||||    
T  52618974 aaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtca 52619073  T
Q  130 taagttgttt 139  Q
    ||| ||||||    
T  52619074 taaattgttt 52619083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 12923425 - 12923321
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| || |||| ||||| ||||||||||||||| |||  || ||||||   ||| || |||||| | |||||||||||||| |||||||    
T  12923425 aaaataaagtcaaactgctttcttataagctataagttgttttcctaagttaccttagaaaacttctataaataagctgaaaacaacttatggacatgtc 12923326  T
Q  129 ataag 133  Q
    |||||    
T  12923325 ataag 12923321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 14548803 - 14548711
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| |||||||||||||||||||  |||  | ||| |||||| ||||||| | ||||||| | ||| || |||||||| |||||||    
T  14548803 tttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttt 14548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 40881026 - 40880938
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| |||||| |||||||||||||||||| |||||   ||||| ||||||    ||||||||||| |  |||||||||||||||||    
T  40881026 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 40880938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 43875465 - 43875549
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| |||| |||||| ||||| | |||  ||||| ||||||| | |||||||||||||| || | |||||||||||||||||    
T  43875465 tataagatgttctcataagctatcctggagaacttatggaaataatcagaaaacaacttatggacgtatcataagttgtttctat 43875549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 54180843 - 54180767
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttcta 142  Q
    ||||||||||| ||||  | ||| ||||||| |||||| |  ||||||||||||| |||||||||||| ||||||||    
T  54180843 tgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgtttcta 54180767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 26808271 - 26808184
Alignment:
Q  53 ataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||  | ||||||||||||||| ||||  || | ||||||||| |  ||||||  |||| ||||||||||||||||||||    
T  26808271 ataaactataaactattttcataaactatcctagaaagcatgtagaaataagctcaaaacagtttataaacatgtcataagttgtttc 26808184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 33725951 - 33725860
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||| ||||||  |||||| |||||||||| | ||  ||||||||||||||   ||||||| | ||| |||||||||||||||| ||||||    
T  33725951 tataagctataaactgtttttataaactatcctggaaagcttatagaaataagatgaaaacagcatatcaacatgtcataagttgcttctat 33725860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 43875638 - 43875716
Alignment:
Q  49 tcatataaactataagttgttttcataaactatcttagagtgcttata--gaaataaaccgaaaacaacttatgaacat 125  Q
    |||||||| ||||||||||||||||||| ||||| | ||| |||||||   ||||||| |||||||| |||||| ||||    
T  43875638 tcatataagctataagttgttttcataagctatcatggagagcttatatgaaaataaaacgaaaacagcttatggacat 43875716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 1833764 - 1833806
Alignment:
Q  97 gaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||| ||||||||||||| | |||||||||||    
T  1833764 gaaataaaccgaaaataacttatgaacatattataagttgttt 1833806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 13709886 - 13709820
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||||||||| ||||| | ||| | |||| ||||||||| |||||||||||||| || ||||||||    
T  13709886 tgttttcataagctatcctggagagtttattgaaataaactgaaaacaacttatggacttgtcataa 13709820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 22214781 - 22214735
Alignment:
Q  30 aaaataaagttaaattgt-ttcatataaactataagttgttttcata 75  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  22214781 aaaataaagtgaaattgtattcatataacctataagttgttttcata 22214735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 23793594 - 23793663
Alignment:
Q  69 tttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||| ||||||| ||  |||||||||||||| | ||||||||||||| ||  |||||||||||||||    
T  23793594 tttcataagctatcttggaaagcttatagaaataagctgaaaacaacttat-aagttgtcataagttgttt 23793663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 36139848 - 36139958
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| || |||| ||||| |||||||||||||   || ||||||||  || ||||||  |||||| | ||||||| ||| ||||||||||    
T  36139848 aaaataaagtcaaactgatttcgtataagctataagttgtttcattatactatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtc 36139947  T
Q  129 ataagttgttt 139  Q
    ||||| |||||    
T  36139948 ataagctgttt 36139958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 36200134 - 36200176
Alignment:
Q  97 gaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||| | |||||||||||||| ||||||||||||||||||    
T  36200134 gaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 50004683 - 50004733
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| ||||||| | ||||||| |||| |||||||||||||||||||||    
T  50004683 gcttattgaaataagctgaaaacagcttaagaacatgtcataagttgtttc 50004733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 3044281 - 3044248
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||| ||||||||||||||||||||||||||    
T  3044281 gaaaacagcttatgaacatgtcataagttgtttc 3044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 10540593 - 10540540
Alignment:
Q  29 aaaaataaagttaaattg-tttcatataaactataagttgttttcataaactat 81  Q
    ||||||||||| |||||  ||| |||||||||||||||||||||||||| ||||    
T  10540593 aaaaataaagtcaaattaattttatataaactataagttgttttcataagctat 10540540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 188
Target Start/End: Original strand, 27294394 - 27294475
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataaa 188  Q
    ||||||| ||||||| ||| |||| ||||||||||||||| ||| |  |||| ||||| ||||  ||||| |||||||||||    
T  27294394 gaaaacagcttatgagcatatcatgagttgtttctatgagctctctcaaacagtctcacaagtgcttatgacaatagataaa 27294475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 47249517 - 47249476
Alignment:
Q  98 aaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| || ||||||||||||||||||||||||||| ||||    
T  47249517 aaataagccaaaaacaacttatgaacatgtcataagtggttt 47249476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 47319348 - 47319275
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    ||||||||||||| |||| |||||| ||||||||||| ||||||  ||||||   |||| |||||||| |||||    
T  47319348 tataaactataagctgttgtcataatctatcttagagagcttatgaaaataagtagaaatcaacttattaacat 47319275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 47513672 - 47513733
Alignment:
Q  78 ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||| ||| ||||||  |||||||  ||||||||||||||||| |||||||| ||||||    
T  47513672 ctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttt 47513733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 1816583 - 1816659
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    |||||||||||||||||| ||||  | ||| ||||||  |||||| | ||||||| | |||||| ||||||||||||    
T  1816583 tataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagtt 1816659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 21754765 - 21754797
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| ||||||||||||||||||||||    
T  21754765 gaaaacaactgatgaacatgtcataagttgttt 21754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 21862257 - 21862177
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    |||||||||| |||| ||| ||| |||| | ||||||  ||| |||||| ||||||| | |||||||||||||| ||||||    
T  21862257 tttcatataagctatgagtagttctcattagctatctgggagagcttatggaaataagctgaaaacaacttatggacatgt 21862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 28622070 - 28622006
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaa 122  Q
    ||||||| ||||||||||||||||||| |||  |||||  |||||| | ||||||| ||||||||    
T  28622070 ctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 31710957 - 31710877
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| ||||||| ||| ||||||||||| |||| | ||| ||| | ||||||| || |||  |||||||||||||||||    
T  31710957 tataagctgttttcttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgttt 31710877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 31711212 - 31711132
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| ||||||| ||| ||||||||||| |||| | ||| ||| | ||||||| || |||  |||||||||||||||||    
T  31711212 tataagctgttttcttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgttt 31711132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 34924612 - 34924536
Alignment:
Q  55 aaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcata 131  Q
    ||||||| || | ||||||||| ||||||||||| ||||||  |||||| | ||||||||| |||| || |||||||    
T  34924612 aaactatgagctattttcataagctatcttagagagcttatgaaaataagctgaaaacaacatatggacttgtcata 34924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 36783434 - 36783382
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactat 81  Q
    |||||||||| ||||||||| |||||||||||| || ||||||||||| ||||    
T  36783434 aaaataaagtaaaattgttttcatataaactattagctgttttcataagctat 36783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 36887504 - 36887580
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    |||||||||||||||||| | |||||  ||  |||||  |||||| | ||||||| ||||||||||||||| |||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtcaaaagtt 36887580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 41644515 - 41644435
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| ||||||||||| ||||| |||||  ||||  ||||||| | ||||||| |||||||| |||||  |||||||||    
T  41644515 tataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgtcccaagttgttt 41644435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 49586992 - 49586924
Alignment:
Q  73 ataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttct 141  Q
    |||| ||||||| ||| | ||| |||||||||| |||||||||||||| | |||||||||  |||||||    
T  49586992 ataagctatcttggagagattaaagaaataaactgaaaacaacttatggatatgtcataaactgtttct 49586924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 51510271 - 51510219
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    ||||||||||||||||||||||||||  |||| | ||| |||||| |||||||    
T  51510271 atataaactataagttgttttcataagttatcgtggagagcttatggaaataa 51510219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 143
Target Start/End: Complemental strand, 52412974 - 52412890
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| | |||||||||  | || ||||| || ||| ||||||| | ||||||| ||||| ||||||||||| |||||||||||    
T  52412974 tataagctattttcataagttgtcctagagagcatatggaaataagctgaaaacagcttataaacatgtcataggttgtttctat 52412890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 53891964 - 53891880
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttcta 142  Q
    ||||||| || |||||||| ||||| |||||||||  | |||||||||  |||||||||||||  |||||  |||| ||||||||    
T  53891964 ctataagctgatttcataagctatcctagagtgctgttggaaataaacttaaaacaacttatgggcatgtgttaagctgtttcta 53891880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 30257653 - 30257756
Alignment:
Q  30 aaaataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| |||||| |||||| || |||||||||||||||||||||| | ||| |||||||||||||| | ||||||| ||||||||||||||    
T  30257653 aaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtc 30257752  T
Q  129 ataa 132  Q
    ||||    
T  30257753 ataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 31517840 - 31517730
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||||||||||| |||||||||| ||||||| ||| ||||||| || |||| ||| ||||||  |||||| | ||||||| ||||||||||||||    
T  31517840 aaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtc 31517741  T
Q  129 ataagttgttt 139  Q
    || ||||||||    
T  31517740 atgagttgttt 31517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 25479551 - 25479654
Alignment:
Q  30 aaaataaagttaaattgt-ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||| || ||||||| ||||||||  ||||||||||||||||||| ||||| ||||| ||||||  |||||| | |||||||||| |||||||||||    
T  25479551 aaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtc 25479650  T
Q  129 ataa 132  Q
    ||||    
T  25479651 ataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 30371118 - 30371230
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||| | ||||||||| ||||||| |||||||||||||||||||   || || ||| || ||| ||||||| | |||||||||||||| |||||||    
T  30371118 aaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaacttatggacatgtc 30371217  T
Q  129 ataagttgtttct 141  Q
    || ||||||||||    
T  30371218 attagttgtttct 30371230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 23902149 - 23902070
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatg 126  Q
    |||||||||| |||||||||||||||| || ||||||||||| |||||| ||| ||| | |||||||||||||| |||||    
T  23902149 tttcatataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcacatg 23902070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 4699681 - 4699605
Alignment:
Q  63 agttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| |||||||||||||||   ||| |||||||||||||| |  |||||| |||||||||||||||||||||||||    
T  4699681 agttattttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttt 4699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 28689536 - 28689441
Alignment:
Q  47 tttcatataaactataagttgttttcataaa--ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||| |||||||||||||||||| |  ||||||| ||  ||||||  |||||| | |||||||||||||| |||||||||||| ||||||    
T  28689536 tttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttc 28689441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 12564956 - 12564877
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatg 126  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||||||  ||||||| | ||||||| |||||| |||||    
T  12564956 tttcatataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 27887197 - 27887114
Alignment:
Q  50 catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||||| ||||||||||||||||||||||||| | ||| || |||| |||||| |  ||||||| ||||| ||||||||||||    
T  27887197 catataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtcataag 27887114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 7218174 - 7218064
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||| | |||  |||||  ||||||   ||||||| ||| ||||| ||||    
T  7218174 aaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtc 7218075  T
Q  129 ataagttgttt 139  Q
    |||||| ||||    
T  7218074 ataagtcgttt 7218064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 10199490 - 10199404
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||| ||||| | ||||| | ||||||||| |||| |||||| ||||||  |||||| | |||||||||||||||||||||||||||    
T  10199490 tttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 15581224 - 15581382
Alignment:
Q  30 aaaataaagttaa-attgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||||||| ||  ||| |||||| ||||||| | |||| ||||  |||  ||||| |||||||||||||  | ||||||| |||||  |||||||    
T  15581224 aaaataaagttaatatatttttatataagctataagctttttttataaggtatgctagagggcttatagaaataggctgaaaacagcttatagacatgtc 15581323  T
Q  129 ataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataa 187  Q
    |||||||||||| || || ||||   |||||||||| ||||  |||||||| |||||||    
T  15581324 ataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataa 15581382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 19412663 - 19412586
Alignment:
Q  63 agttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||| ||||| ||||||||  |||||| ||||||| || ||| || |||||| |||||||||||||||||||    
T  19412663 agttgttttcgtaaaccatcttagaaagcttatggaaataagccaaaatcagcttatggacatgtcataagttgtttc 19412586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 37842454 - 37842345
Alignment:
Q  31 aaataaagttaaattgt-ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    ||||||||||||| ||| |||  |||| ||||||||||||||||||| |||||||  ||  |||||| |||||| | ||||||  |||||||||||||||    
T  37842454 aaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtca 37842355  T
Q  130 taagttgttt 139  Q
    | || |||||    
T  37842354 ttagatgttt 37842345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 46252739 - 46252674
Alignment:
Q  72 cataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 137  Q
    ||||| ||||||| ||| ||||||  |||||| | |||||||||||||||||||||||||||||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttgt 46252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 3223670 - 3223749
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttct 141  Q
    |||||||||||| |||  |||| ||| | |||||| ||||||| | ||||||||||||| |||||||||||||||||||||    
T  3223670 taagttgttttcgtaagttatcctagcgagcttat-gaaataagctgaaaacaacttataaacatgtcataagttgtttct 3223749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 17269220 - 17269324
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||||||||| ||||||| | ||||||||||||||||| ||||| | ||| |||||  | |||||    ||||||||| |||||||||||    
T  17269220 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtc 17269319  T
Q  129 ataag 133  Q
    |||||    
T  17269320 ataag 17269324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 24675986 - 24676074
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| ||||| ||||| ||||||||||||| | || | | ||||||||||||||| | ||||||||||  |||| ||||||||    
T  24675986 atataaactaaaagttattttcgtaaactatcttagggagcctgtcgaaataaaccgaaaatagcttatgaacagatcatgagttgttt 24676074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 17628573 - 17628680
Alignment:
Q  34 taaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    |||||| ||||||||| |||||||| |||||| |||||| || |||||| || |||  ||| | ||||||  | ||||||| |||||| |||||||||||    
T  17628573 taaagtcaaattgttttcatataaattataagctgtttttattaactattttggaggtcttttggaaatatgctgaaaacagcttatggacatgtcataa 17628672  T
Q  133 gttgtttc 140  Q
    ||||||||    
T  17628673 gttgtttc 17628680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 25006134 - 25006079
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatctt 84  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||    
T  25006134 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatctt 25006079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 28077132 - 28077073
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    ||||||||||| |||| |||||| |||||| ||||||| | |||||||||||||||||||    
T  28077132 tgttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacat 28077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 35351038 - 35351105
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    ||||||||||| ||||||||||||| ||||| ||||| | |||||| | ||||||||||||| |||||    
T  35351038 ctataagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaacttataaacat 35351105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 6659502 - 6659580
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    |||||||||| ||||||| ||||||||||| ||| |  |||| |||||| ||||||| | |||||||||||||| ||||    
T  6659502 tttcatataagctataagatgttttcataagctaaccaagagagcttatcgaaataagctgaaaacaacttatggacat 6659580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 39348047 - 39347953
Alignment:
Q  49 tcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||| || ||||||||||||||||||||||||| |  |  |||||| ||||||| | |||||||||||||| ||||| |||  | |||||||||    
T  39348047 tcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatggacatgccattggctgtttctat 39347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 49888737 - 49888819
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaa 111  Q
    ||||||||||| |||||||| | ||||| |||| |||||||||||||| |||||||||||  |||||  |||||| |||||||    
T  49888737 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 2234731 - 2234819
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||| |||||||||||| ||| ||||  || || |||||| ||| ||  |  |||||||||||||||||||||||||||||||||    
T  2234731 atataaactttaagttgttttcgtaagctatactaaagagcttatggaa-tagtctaaaaacaacttatgaacatgtcataagttgtttc 2234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 7137075 - 7136994
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||| ||||||| ||||||||||| ||||||| |||  |||||  |||||| | ||||| |||||||||| ||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataag 7136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 10744300 - 10744381
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||| ||||||||||| || ||||||||  |||||| ||||||   ||||||| |||||||||||| |||||| |||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttt 10744381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 27140478 - 27140559
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| |||||| |||| ||||| | ||| ||||||  |||||| | |||||||||||||| |||||||||||| ||||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttc 27140559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 27963438 - 27963361
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtt 138  Q
    |||||||||||||||| ||||  | ||| ||||||| |||||| |  ||||||||||||| |||||||||||| ||||    
T  27963438 taagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgtt 27963361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 28482315 - 28482166
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgag 146  Q
    |||||||||| ||||||| |||||| ||||  |||||| ||| |||||   |||||| |  |||| |  ||||||| || ||||||| ||||||||||||    
T  28482315 tttcatataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatgaatatatcataagatgtttctatgag 28482216  T
Q  147 atcttttgaacaatctcagaagtatttatgtcaatagataaatttaaata 196  Q
     ||| | ||||||||||| ||||   ||||||| ||||||| || |||||    
T  28482215 ctctatcgaacaatctcacaagttcgtatgtcagtagataagttcaaata 28482166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 29007798 - 29007705
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||| |||||||||||||||||   |||  ||  |  |||||| ||||||| | ||||||||||||||||||| |||||| |||||||    
T  29007798 tttcatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacatatcataaattgtttc 29007705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 34290229 - 34290310
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||| ||||||| ||||||||||| |||||||  ||  |||||  |||||| | |||||||||||||||| ||||||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataag 34290310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 37241904 - 37241811
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaac-cgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| ||| |||||||||||||||  |||| ||||| ||||||  |||||| |  ||||| |||||||||| || |||||||||||||    
T  37241904 tttcatataagctagaagttgttttcataagatatcctagagagcttatgaaaataagctggaaaaaaacttatgaatatatcataagttgttt 37241811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 3924612 - 3924704
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||| |||| ||||||||| |||| ||||| |  || | |||| ||||||| ||||||||||||||| ||||| |||||| ||||||    
T  3924612 tttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 3924704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 6292493 - 6292573
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| | ||||| |||||||| || ||| ||||||  |||||| | ||||||| ||||||||||||||||||| |||||    
T  6292493 tataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttt 6292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 14630044 - 14629964
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcata 131  Q
    |||||| ||||||| | ||||||||| ||||||| |||   |||| ||||||| | ||||||||||||||||||| |||||    
T  14630044 atataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacatatcata 14629964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 15558217 - 15558285
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    |||||| |||||||||||  |||| |||||  ||||||||||||| | ||||||||||||||| |||||    
T  15558217 tataagctgttttcataagatatcctagagaacttatagaaataagctgaaaacaacttatgagcatgt 15558285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 24460487 - 24460403
Alignment:
Q  49 tcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||||| ||||||  |||||||||||| ||||| | ||| ||||| | |||||| | | ||||| |||||||||||||||||||    
T  24460487 tcatatagactatagtttgttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataag 24460403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 30259587 - 30259463
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaa-ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    |||||||||| ||| || ||| |||||| ||||||| ||||| |||||| ||||| | ||| |||||| |||||||   |||||||| ||||  ||||||    
T  30259587 aaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataagttgaaaacaatttattgacatgt 30259488  T
Q  128 cataagttgtttctatgagatcttt 152  Q
    | |||||||||||||| || |||||    
T  30259487 cgtaagttgtttctataagctcttt 30259463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 40394986 - 40394938
Alignment:
Q  29 aaaaataaagttaaattgttt-catataaactataagttgttttcataa 76  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  40394986 aaaaaaaaagttaaattgttttcatataaattataagttgttttcataa 40394938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 42397752 - 42397808
Alignment:
Q  87 agtgcttatagaaataaacc-gaaaacaacttatgaacatgtcataagttgtttcta 142  Q
    ||||||||| ||||| || | |||||||||||||||||||| |||||||||||||||    
T  42397752 agtgcttatggaaattaagctgaaaacaacttatgaacatgccataagttgtttcta 42397808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 3320015 - 3319929
Alignment:
Q  46 gtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||||||||||||||||||||||  | ||| ||||| |||||  ||||| || |||| | ||||||||| |||| ||||||||||||    
T  3320015 gtttcatataaactataagttgttaacgtaagctatcatagagatcttatggatataagctgaaaacaac-tatggacatgtcataag 3319929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 6231898 - 6231799
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgag 146  Q
    |||||||||| ||||||| ||||||| ||| ||| | |  ||  ||||||||||||| | |||||||  ||||| ||||||||| ||||||||| |||||    
T  6231898 tttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcattagttgtttccatgag 6231799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 11129245 - 11129304
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaactta 118  Q
    |||| ||||||||| |||||||| || ||| |||||| ||||||||||||||||| ||||    
T  11129245 tataggttgttttcgtaaactattttggagagcttatggaaataaaccgaaaacagctta 11129304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 12564582 - 12564495
Alignment:
Q  46 gtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||||| ||  |||| ||||||||||||| ||||||| |||  ||||| ||||||| | |||||||||||||  || |||||||||    
T  12564582 gtttcatacaaggtataggttgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttattgacttgtcataag 12564495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 34405128 - 34405231
Alignment:
Q  31 aaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    |||||||||||||||||||   ||||| |||||||   |||||||||| ||||| |||||||| ||  ||| || | ||||| ||||||||||||||| |    
T  34405128 aaataaagttaaattgtttttgtataatctataagcaattttcataaattatctcagagtgctgatgaaaaaaagctgaaaataacttatgaacatgtta 34405227  T
Q  130 taag 133  Q
    ||||    
T  34405228 taag 34405231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 35925674 - 35925770
Alignment:
Q  47 tttcatataaactataagttgtttt----cataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||||||||||||     ||||| ||||| | ||| | |||| |||||||   ||||||| ||||||||||||||||||| |||||    
T  35925674 tttcatataaactataagttgtttgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 37295815 - 37295760
Alignment:
Q  33 ataaagttaaattgttt-catataaactataagttgttttcataaactatcttaga 87  Q
    ||||||||||||||||| | | ||| ||||||||||||||||||| ||||||||||    
T  37295815 ataaagttaaattgttttcgtttaagctataagttgttttcataacctatcttaga 37295760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 38247130 - 38247043
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||||| |||||| | ||||| | ||| ||||||| || |||   ||||||||||||||||| ||| |||||| ||||    
T  38247130 tataaactataagttgctttcatgatctatcgtggagagcttataaaagtaagttgaaaacaacttatgaacgtgtaataagtggttt 38247043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 143
Target Start/End: Complemental strand, 43532628 - 43532593
Alignment:
Q  108 aaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||||| ||||||||||||||||||||||||||    
T  43532628 aaaacaactcatgaacatgtcataagttgtttctat 43532593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 45205038 - 45205153
Alignment:
Q  30 aaaataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| | |||| |||||| ||| ||||||||||||||| ||||| |  || | | || ||||||| | |||||||||||| | |||| ||    
T  45205038 aaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttagggacatatc 45205137  T
Q  129 ataagttgtttctatg 144  Q
    ||||||||||| ||||    
T  45205138 ataagttgtttttatg 45205153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 6981477 - 6981631
Alignment:
Q  44 ttgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| ||||||| |||||| || |||| ||| ||||  | ||| | |||| ||||||  | |||||||||||||  ||||| ||||| |||| |||||    
T  6981477 ttgtttgatataaattataagctgatttcctaagctattctggagagtttatggaaatatgctgaaaacaacttattgacatgacataaattgtatctat 6981576  T
Q  144 gagatcttttgaacaatctcagaagtatttatgtcaatagataaatttaaatagg 198  Q
     || |||||| |||| || || ||||  ||||| || |||||||||| |||||||    
T  6981577 aagctcttttaaacattcacacaagtgcttatgccactagataaattcaaatagg 6981631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 12593522 - 12593449
Alignment:
Q  60 ataagttgttttcataaactatcttagagtgcttatagaaataaacc-gaaaacaacttatgaacatgtcataag 133  Q
    ||||| ||||||||||| ||||||| ||| |||||| ||| |||||| |||||||||||||| |||||| |||||    
T  12593522 ataagctgttttcataagctatcttggagcgcttatggaa-taaacctgaaaacaacttatgcacatgttataag 12593449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 15437966 - 15438044
Alignment:
Q  62 aagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||||||  ||||| | ||| | |||  ||||||| | ||||  ||||||||||||||||||||||||||||    
T  15437966 aagttgttttcataggctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgtttc 15438044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 15942811 - 15942737
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaa-cttatgaacatgtcataagttgttt 139  Q
    |||||||||||  |||||| |||  ||||| ||||||| | |||||||  |||||||||||||||||||||||||    
T  15942811 tgttttcataatttatcttggagaacttattgaaataagctgaaaacatgcttatgaacatgtcataagttgttt 15942737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 26184759 - 26184829
Alignment:
Q  70 ttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||| |||| | ||| |||||| ||||||| | ||||||| |||||| |||||||||||| ||||||    
T  26184759 ttcataaattatcctggagagcttatggaaataatctgaaaacagcttatggacatgtcataagctgtttc 26184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 34278729 - 34278687
Alignment:
Q  93 tatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    ||||||||||| | ||||||||| |||||||||||||||||||    
T  34278729 tatagaaataagctgaaaacaacctatgaacatgtcataagtt 34278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 42556709 - 42556639
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatga 121  Q
    |||||| ||||||||||||||||||| ||||| | ||| | |||||  ||||||| ||||| |||||||||    
T  42556709 atataagctataagttgttttcataagctatcatggagagtttatatcaataaactgaaaataacttatga 42556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 4549222 - 4549311
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| ||||||| || ||||| ||||||||   ||  |||||| ||||||| | |||||||||||||  ||||||||||| |||||||    
T  4549222 atataagctataagctgctttcacaaactatccaggatagcttatggaaataagctgaaaacaacttatagacatgtcataaattgtttc 4549311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 5422020 - 5421955
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgctta 94  Q
    |||||| ||| ||||||||| | ||||| |||||||||||||| |||| ||||||||||| |||||    
T  5422020 aaaatatagtcaaattgttttcttataagctataagttgttttgataagctatcttagagagctta 5421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 16982010 - 16981933
Alignment:
Q  55 aaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||| |||| |||| |||||| ||||| | ||| ||||||| |||||| |  ||||||||||||| |||||||||||    
T  16982010 aaactttaagatgttatcataagctatcatggagagcttatataaataagctaaaaacaacttatggacatgtcataa 16981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 25005879 - 25005830
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttata 96  Q
    |||||||||| ||||||||||||||||||| ||||| | ||| |||||||    
T  25005879 tttcatataagctataagttgttttcataagctatcctggagagcttata 25005830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Original strand, 26185559 - 26185592
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||||| |||||||||||||||||||    
T  26185559 gaaaacaacttatgcacatgtcataagttgtttc 26185592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 30285879 - 30285972
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||| | ||  |||||||||||||||||||| ||   || |||||||||| | ||||||||||||| | |||| ||| || ||||||    
T  30285879 tttcatataaattttactttgttttcataaactatcttggatatctaatagaaataagcagaaaacaacttattagcatgccatgagatgtttc 30285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 37942016 - 37941971
Alignment:
Q  98 aaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| |||| ||||||||||| ||||||||||| ||||||||||    
T  37942016 aaataagccgagaacaacttatggacatgtcataaattgtttctat 37941971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 3070112 - 3070080
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||| |||||||||||||||||||||||||    
T  3070112 gaaaacagcttatgaacatgtcataagttgttt 3070080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 4622081 - 4622185
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgag 146  Q
    |||||||||| ||||||| ||||| ||||  ||||||| ||| |||| |  |||||| |  |||||| |||||| |||||||||||| |||| | || ||    
T  4622081 tttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgttcccattag 4622180  T
Q  147 atctt 151  Q
    |||||    
T  4622181 atctt 4622185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 135
Target Start/End: Original strand, 5276341 - 5276369
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagtt 135  Q
    |||||||||||||||||||||||||||||    
T  5276341 gaaaacaacttatgaacatgtcataagtt 5276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 5592785 - 5592694
Alignment:
Q  30 aaaataaagttaaattgtt-tcatataaactataagttgttttcataaacta-tcttagagtgcttatagaaataaaccgaaaacaacttatg 120  Q
    ||||||||||  ||||||| |||||||| ||||||||||||||||||| ||| ||||| || ||||||  |||||| | | ||||||||||||    
T  5592785 aaaataaagtcgaattgttgtcatataagctataagttgttttcataagctagtctta-agagcttatgaaaataagctggaaacaacttatg 5592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 6976973 - 6977005
Alignment:
Q  108 aaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| ||||||||||||||||||||||||||    
T  6976973 aaaacagcttatgaacatgtcataagttgtttc 6977005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 7262616 - 7262508
Alignment:
Q  32 aataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcat 130  Q
    |||||||||||| ||||| ||| | || |||||||| ||||||||| ||||| |  || |||| | |||||||   ||||||| |||||||||||||||     
T  7262616 aataaagttaaactgttttcattttaagtataagttcttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtcaa 7262517  T
Q  131 aagttgttt 139  Q
    ||| |||||    
T  7262516 aagctgttt 7262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 15515529 - 15515621
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||| |||||||||||||||||||  |||| | ||  |||||| ||||||||  ||||| | | |||  ||||||||||||||||||    
T  15515529 tttcgtataagctataagttgttttcataagttatcatggatagcttatggaaataaattgaaaatagcgtattgacatgtcataagttgttt 15515621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 15579515 - 15579563
Alignment:
Q  92 ttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||| ||||||| | || ||||||||||| |||||||||||||||||||    
T  15579515 ttatggaaataagctgagaacaacttatggacatgtcataagttgtttc 15579563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 27738280 - 27738228
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactat 81  Q
    |||||||||| ||||||||| ||||||| |||||| |||||||||||| ||||    
T  27738280 aaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 31118075 - 31118123
Alignment:
Q  91 cttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||| ||||||| | |||||||||| |||||||||||||||| |||||    
T  31118075 cttatggaaataagctgaaaacaactgatgaacatgtcataagatgttt 31118123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 31294597 - 31294513
Alignment:
Q  53 ataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 137  Q
    |||||||||||||||||||  ||||||||| ||||| ||||||  ||||||   ||||| | |||||| |  |||||||||||||    
T  31294597 ataaactataagttgtttttgtaaactatcatagagagcttatgaaaataagttgaaaagagcttatggatgtgtcataagttgt 31294513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 33723479 - 33723371
Alignment:
Q  33 ataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcata 131  Q
    ||||||| ||||||||| |||||||||||| |  ||||||||||| ||| | |  |  |||||| ||||||| | ||||||| || |||||||||||||     
T  33723479 ataaagtcaaattgttttcatataaactatgaactgttttcataagctaccctgtaaagcttatggaaataagctgaaaacatctcatgaacatgtcatg 33723380  T
Q  132 agttgtttc 140  Q
    || ||||||    
T  33723379 agctgtttc 33723371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 33976674 - 33976730
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    ||||||||||  |||||||||||||| ||| ||||| ||||| |||||| |||||||    
T  33976674 tttcatataagttataagttgttttcttaacctatcctagagagcttatggaaataa 33976730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 37593744 - 37593676
Alignment:
Q  69 tttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 137  Q
    |||||||| |||| ||  || ||||||  |||||| | ||||||| |||||||||||||||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgt 37593676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 38170712 - 38170680
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||||||||||||||| |||||    
T  38170712 gaaaacaacttatgaacatgtcataagctgttt 38170680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 47413366 - 47413330
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatct 83  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  47413366 tttcatataaactgtaagatgttttcataaactatct 47413330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 135
Target Start/End: Original strand, 47917284 - 47917312
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagtt 135  Q
    |||||||||||||||||||||||||||||    
T  47917284 gaaaacaacttatgaacatgtcataagtt 47917312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 1137706 - 1137792
Alignment:
Q  53 ataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||||| || ||||||||||||||  |||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  1137706 ataatctataagctgctttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttt 1137792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 49219109 - 49219200
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatg 120  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||| || | |||| ||||||| | ||||||||||||||    
T  49219109 aaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 24929481 - 24929574
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||| || |||||||||||||||||||||| |  ||||| |||||| ||||||| | |||||||| ||||||||||| |||||| ||||||    
T  24929481 tttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatgaacatgccataagctgtttc 24929574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 29263340 - 29263451
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||||| ||||||| || |||| | ||||||||||||||||| ||||| |  || |||| | ||||||| | ||||||||||||||||||| ||    
T  29263340 aaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatc 29263439  T
Q  129 ataagttgtttc 140  Q
    ||||| ||||||    
T  29263440 ataagctgtttc 29263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 23819077 - 23819169
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||  |||||  ||||||||||| |||||||  || ||||||||||||||   |||||||||||||| |||||||||||| |||||    
T  23819077 tttcatataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttt 23819169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 6927593 - 6927545
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaa 77  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  6927593 aaaataaagttaaattgttttcatgtaaactataagttgttttcataaa 6927545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 11264301 - 11264385
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||||||||||||||| | ||| ||||| |||||| |||||||   |||||||  ||||| ||||||||||||||| ||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctat 11264385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 30207653 - 30207569
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcata 131  Q
    |||||||||| ||||||||||||||||||| ||| ||||||| | |||| ||||||| | ||||||| ||||   ||||||||||    
T  30207653 tttcatataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 2996543 - 2996710
Alignment:
Q  30 aaaataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||| ||| |||||||||  ||||||  |||||||||||||||||| ||||||| ||| || |||  ||||||   ||||| | |||||| |||||||    
T  2996543 aaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtc 2996642  T
Q  129 ataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataaatttaaata 196  Q
    |||||||||||  || || ||| |  |||| ||||| ||||  ||||||||||| |||| || |||||    
T  2996643 ataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataagttcaaata 2996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 7694087 - 7694009
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcat 130  Q
    ||||| ||||||| |||||||||||  |||| | ||| | |||| ||||||| | ||||||||||||||||||||||||    
T  7694087 tataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 8468926 - 8469028
Alignment:
Q  37 agttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttg 136  Q
    |||||| || |||||||||| |||| ||||||||||||||  |||  ||||| ||||||  |||||| | |||||||||||||| ||||| | |||| ||    
T  8468926 agttaatttttttcatataagctattagttgttttcataagttattctagagagcttatgaaaataatctgaaaacaacttatggacatgccgtaagatg 8469025  T
Q  137 ttt 139  Q
    |||    
T  8469026 ttt 8469028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 12816997 - 12817063
Alignment:
Q  121 aacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataa 187  Q
    ||||||||||||||||||||| | || |||||  |||||||||| |||||||||| |||||| ||||    
T  12816997 aacatgtcataagttgtttctctaagttctttcaaacaatctcacaagtatttatatcaatatataa 12817063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 20936329 - 20936219
Alignment:
Q  30 aaaataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||| |||| |||||||||  |||||| ||||| ||||||||||||  ||||| | ||| | |||| |||||||   ||||||| ||||||||||| ||    
T  20936329 aaaatgaagtcaaattgtttttatataatctataggttgttttcatattctatcctggagagattatggaaataaggtgaaaacagcttatgaacatatc 20936230  T
Q  129 ataagttgttt 139  Q
    |||||||||||    
T  20936229 ataagttgttt 20936219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 46110210 - 46110283
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||| ||||  | ||| |||||||||||||| | |||||||||||||||  || |||||||||||||    
T  46110210 tgttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagtatatcataagttgttt 46110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 17884038 - 17884134
Alignment:
Q  30 aaaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    ||||||||||||||||||||   |||||  ||| |||||||||||||| |||| || ||| ||||||  |||| | | |||||||||||||||||||    
T  17884038 aaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 437532 - 437473
Alignment:
Q  30 aaaataaagttaaattgt-ttcatataaactataagttgttttcataaactatcttagag 88  Q
    |||||||||||||||||| |||||||||  | |||||||||||||||| |||| ||||||    
T  437532 aaaataaagttaaattgtgttcatataagttttaagttgttttcataagctattttagag 437473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 2225623 - 2225662
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttctatgag 146  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  2225623 gaaaacaacttatgaagatgtcataagtcgtttctatgag 2225662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 6466123 - 6466036
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||| ||||||||||||| ||||| ||||  ||||| | |||| |||||||   ||||| | ||||||||||| |||||||||||||    
T  6466123 tataatctataagttgtttccataagctattctagagagattatggaaataagttgaaaatagcttatgaacatctcataagttgttt 6466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 27043930 - 27043875
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatctt 84  Q
    |||||||||||||||||||| | ||||| ||||||| |||||| ||||||||||||    
T  27043930 aaaataaagttaaattgttttcgtataagctataagatgtttttataaactatctt 27043875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 42121481 - 42121563
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    ||||| ||||||||||||||||| | ||||||| |||  ||| | ||||||| | |||| || |||||||||||||||||||||    
T  42121481 tataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctgaaa-cagcttatgaacatgtcataagtt 42121563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 56480318 - 56480393
Alignment:
Q  30 aaaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaa 104  Q
    ||||||||||||||||||||   |||||  |||||| ||||||||||||||||||| ||| ||||||  |||||||    
T  56480318 aaaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaaataaa 56480393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 11158427 - 11158373
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaaca 113  Q
    |||||||||||||||||| ||||||||||| |||| | ||||||| | |||||||    
T  11158427 tataagttgttttcataagctatcttagagagcttgtggaaataagctgaaaaca 11158373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 11842203 - 11842237
Alignment:
Q  47 tttcatataaactataagttgttttcataaactat 81  Q
    |||||||||| ||||||||||||||||||||||||    
T  11842203 tttcatataagctataagttgttttcataaactat 11842237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 34398756 - 34398682
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||||| ||||||||||| | ||| | ||| |||||| ||| ||| ||||||||||||||||  ||||||||||    
T  34398756 ctataagctgttttcataagccatcatggagagcttatggaagtaagccgaaaacaacttatgggcatgtcataa 34398682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 46201382 - 46201424
Alignment:
Q  93 tatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    ||||||||||| | ||||||||| |||||||||||||||||||    
T  46201382 tatagaaataagctgaaaacaacctatgaacatgtcataagtt 46201424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 53673721 - 53673647
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||| ||||||| ||| ||||||  |||||| | |||||||||||||| |||| | ||| ||||||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacatatgatatgttgtttc 53673647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 55084549 - 55084483
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    |||||||||||||| | ||||||||||| ||||||  |||||| | |||| || |||||||||||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 55084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 24371024 - 24370940
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatg--aacatgtcataagttgtttc 140  Q
    ||||||||||||||||||| ||||| || |  | |||||||||||| | ||||||  ||||||   |||||||||||||||||||    
T  24371024 ctataagttgttttcataagctatcctaaatagtttatagaaataagctgaaaacggcttatgtatacatgtcataagttgtttc 24370940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 35405936 - 35406013
Alignment:
Q  48 ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    ||||||||||||||| |||||||||| ||  |||| | ||| |||||| ||| ||| | ||||||| |||||||||||    
T  35405936 ttcatataaactataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaacagcttatgaacat 35406013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 2900328 - 2900384
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    |||||||||||||||||| |||||||| || ||||| ||||| | ||||| ||||||    
T  2900328 tttcatataaactataagctgttttcacaagctatcatagagagattataaaaataa 2900384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 30631960 - 30632036
Alignment:
Q  63 agttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||| | ||||| |  ||||||| | ||||||| |  |||||| |||||||||||| ||||||||||||    
T  30631960 agttgttttcatgagctatcatgaagtgcttttggaaataagcttaaaacagcttatgaacatgccataagttgttt 30632036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 33534247 - 33534159
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| ||| ||||||||||| |||| ||| || ||| ||||||  |||||| | |||||||||||||| | |||||| || ||||||    
T  33534247 atataatctacaagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttt 33534159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 36048521 - 36048577
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    |||||||||| ||||||| | |||||| || ||||||||||| |||||| |||||||    
T  36048521 tttcatataagctataagctattttcaaaagctatcttagagagcttatggaaataa 36048577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 36463131 - 36463171
Alignment:
Q  92 ttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    |||||||||||||| ||||||| ||||| ||||||||||||    
T  36463131 ttatagaaataaactgaaaacagcttatcaacatgtcataa 36463171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 44019513 - 44019541
Alignment:
Q  47 tttcatataaactataagttgttttcata 75  Q
    |||||||||||||||||||||||||||||    
T  44019513 tttcatataaactataagttgttttcata 44019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 46415862 - 46415782
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||| ||||||||| ||||| | ||| |||||   |||| | | |||||||||||||| |||||||||| |||||||    
T  46415862 tataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgttt 46415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 32821816 - 32821893
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||||||| ||||| || || |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  32821816 tgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctat 32821893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 29316875 - 29316765
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||| |||||||||||| || |||| ||||||| ||||||||| | ||||||| |||  ||||| ||||||| | ||||| ||||||||||||||||    
T  29316875 aaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtc 29316776  T
Q  129 ataagttgttt 139  Q
    ||||| |||||    
T  29316775 ataagctgttt 29316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 3235484 - 3235385
Alignment:
Q  29 aaaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||  |  | |||| ||||||| | ||||||| ||||||||| ||||    
T  3235484 aaaaataaagtcaaactgtttcatataaactataagctgttttcatatactatcttgaaaagtttatggaaataagctgaaaacagcttatgaacctgtc 3235385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 14666518 - 14666629
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| || ||||||||||  ||||||||||||||| || ||||||| |  |||||||  ||||||   ||||||||| ||||||||||||    
T  14666518 aaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatcttggtatgcttatgaaaataaggtgaaaacaacctatgaacatgtc 14666617  T
Q  129 ataagttgtttc 140  Q
    ||||||||||||    
T  14666618 ataagttgtttc 14666629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 43141845 - 43141952
Alignment:
Q  34 taaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    |||||| |||||||||| |||||| ||||||| ||||||||||| ||||| |  || | |||| ||||||||  ||||||||||||||  ||||||||||    
T  43141845 taaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataa 43141944  T
Q  133 gttgtttc 140  Q
    ||||||||    
T  43141945 gttgtttc 43141952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 30552742 - 30552632
Alignment:
Q  31 aaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaa-caacttatgaacatgtca 129  Q
    |||| ||||||| || |||||||| | |||||| || ||||||||||||||| ||||| |||||| ||||||| |  |||| ||||||||  ||||||||    
T  30552742 aaattaagttaacttttttcatatcagctataaattattttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtca 30552643  T
Q  130 taagttgtttc 140  Q
    |||||||||||    
T  30552642 taagttgtttc 30552632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 37766768 - 37766873
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaa-ccgaaaacaacttatgaacatgt 127  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||| | | ||||| |||| | ||  |||||||||| ||||||||||| |||||||||||    
T  37766768 aaaataaagtcaaaatgttttcgtataaactataagttgttttcctgagctatcatagaatactagtagaaataaagccgaaaacaacatatgaacatgt 37766867  T
Q  128 cataag 133  Q
    ||||||    
T  37766868 cataag 37766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 9174784 - 9174896
Alignment:
Q  29 aaaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaac-atg 126  Q
    ||||||| |||||||| | ||||||||  |||||||| ||||||||||| |||||||| || ||||||  |||||| | ||||| | ||||||||| |||    
T  9174784 aaaaatatagttaaatagctttcatatttactataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatg 9174883  T
Q  127 tcataagttgttt 139  Q
    |||||||||||||    
T  9174884 tcataagttgttt 9174896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 33942120 - 33942228
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||||||||| | ||| ||||| ||| ||  |||| | | ||||||| ||||||||||||||    
T  33942120 aaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtc 33942219  T
Q  129 ataagttgt 137  Q
    |||||||||    
T  33942220 ataagttgt 33942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 34652097 - 34652022
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||||| ||||||| ||| |||||| |||||||   ||||||| |||||| ||||||||||||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctat 34652022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 41809296 - 41809234
Alignment:
Q  78 ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||  |||||| ||||||| |  |||||||||||||||||||||||||||||||||    
T  41809296 ctatcttagaaagcttatggaaataagctaaaaacaacttatgaacatgtcataagttgtttc 41809234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 39236573 - 39236496
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||| |||||||||||| ||||||||||||| |  ||||||| |||||| |  ||||||||||||||| |||||    
T  39236573 atataaacaataagttgttttaataaactatcttaaaaagcttataaaaataagctaaaaacaacttatgaatatgtc 39236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 43065517 - 43065440
Alignment:
Q  62 aagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||||  |||| | ||| |||||| ||||||| | |||||||| ||||| ||||||||||||||||||    
T  43065517 aagttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttt 43065440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 43911094 - 43910993
Alignment:
Q  35 aaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||||||||||||||  ||||| | |||||||||||||| || ||||||| ||  |||| |   ||||| | |||||||||||||||||||||||||||    
T  43911094 aaagttaaattgtttccgtataagccataagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacatgtcataag 43910995  T
Q  134 tt 135  Q
    ||    
T  43910994 tt 43910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 22681267 - 22681187
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    |||||||||| ||||||| ||||||||||| ||||| |||||  ||||| ||||||| |  |||||| |||||||||||||    
T  22681267 tttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 22681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 41817177 - 41817248
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||| | ||| |||||| ||||||| | |||||||| |||| ||||||||||||| |||||    
T  41817177 ttttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttt 41817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 9878753 - 9878671
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||||||||   |||||   ||| ||||  ||||||||  ||||||||||||||| |||||||||||||||||||    
T  9878753 ctataagttgttttcattcgctatcccggagagcttgaagaaataagtcgaaaacaacttatggacatgtcataagttgtttc 9878671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 16867738 - 16867812
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||||| |||||||| || ||||||| ||| |||||| |||||||   |||||||||||||||| |||||||||    
T  16867738 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 16867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 18066099 - 18066153
Alignment:
Q  31 aaataaagttaaattgttt-catataaactataagttgttttcataaactatctt 84  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||||||| |||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatctt 18066153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 10285847 - 10285936
Alignment:
Q  46 gtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    ||||||||||| |||||||| |||| ||||| ||| | |||||  ||||| |||||||   ||||||| |||||| ||||||||||||||    
T  10285847 gtttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagtt 10285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 11513868 - 11513921
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatc 82  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||| |||||    
T  11513868 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 14299713 - 14299620
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||  ||| ||||||||||| |  ||||||| ||  |||||||||||||| | ||||||||  |||| | |||||||||||||||||    
T  14299713 tttcatataagttatgagttgttttcacaggctatctttgacagcttatagaaataagctgaaaacaatgtatggatatgtcataagttgtttc 14299620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 16551879 - 16551782
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataa 187  Q
    |||||| ||||||| | ||| |||||||||| | |||||||||| | |||| || || |||| | |||||||||  |||| |||||||||||||||||    
T  16551879 gcttatggaaataagctgaatacaacttatgtatatgtcataagatctttccataagctcttctaaacaatctcgcaagtgtttatgtcaatagataa 16551782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 28677698 - 28677649
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||| ||||||| |||||||||||||||||| |||||||||| |||||    
T  28677698 gcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttt 28677649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 30538204 - 30538159
Alignment:
Q  98 aaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgtttctat 30538159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 35379079 - 35379006
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||| ||||||| ||| ||||||  |||||| | |||||||||||||||||| ||||| || |||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttt 35379006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 43199384 - 43199437
Alignment:
Q  30 aaaataaagttaaattgt-ttcatataaactataagttgttttcataaactatc 82  Q
    |||||||||||||||| | ||| ||||| |||||||||||||||||||||||||    
T  43199384 aaaataaagttaaattatcttcgtataagctataagttgttttcataaactatc 43199437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 1625871 - 1625975
Alignment:
Q  31 aaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaaca-tgtc 128  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||| ||||||| |||  ||||   |||| | | ||||||| |||||||||| ||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtc 1625970  T
Q  129 ataag 133  Q
    |||||    
T  1625971 ataag 1625975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 3673777 - 3673885
Alignment:
Q  30 aaaataaagttaaattg-tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaata-aaccgaaaacaacttatgaacatgt 127  Q
    ||||||||||||||||| ||||||||||  |||||||| ||||||| | |||||||  || ||||  ||||||| || |  ||| |||||||| ||||||    
T  3673777 aaaataaagttaaattgttttcatataagttataagtttttttcattagctatcttgaagagcttgcagaaatataagctcaaaaaacttatgcacatgt 3673876  T
Q  128 cataagttg 136  Q
    |||||||||    
T  3673877 cataagttg 3673885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 15780065 - 15780121
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    |||||||||| ||||||||||||||||||| ||||| |  || ||||||||||||||    
T  15780065 tttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 15780121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 28933824 - 28933903
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||| |||||||||||| ||||| ||||| ||| ||||||||||   ||||||| | |||||||||| ||||||||||||    
T  28933824 tataaattgttttcataagctatcctagagagctgatagaaataagttgaaaacagc-tatgaacatgccataagttgttt 28933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 787341 - 787412
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||||||||  | |||| || |||| | ||||||| |||||| |||||||||||| |||||    
T  787341 ttttcataaactatcttagatggtttatggagataagctgaaaacagcttatggacatgtcataagctgttt 787412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 6227743 - 6227826
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagt 134  Q
    ||||||||||||||| |||||||||| |||| || ||| |||||| | || || | |||||||||||||   ||||||||||||    
T  6227743 atataaactataagtggttttcataagctattttggagagcttatggtaacaagctgaaaacaacttatactcatgtcataagt 6227826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 12147456 - 12147531
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||| ||||||| |||||||||  | ||  ||||||  |||||||| |||||||| ||||||||||||||||||    
T  12147456 ctataatttgtttttataaactattctggatagcttatgaaaataaactgaaaacaatttatgaacatgtcataag 12147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 31740017 - 31739958
Alignment:
Q  84 tagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||| |||||| ||||||| | ||||||| ||||||| |||||||| ||||||||||||    
T  31740017 tagagagcttatggaaataatctgaaaacagcttatgatcatgtcatgagttgtttctat 31739958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 35485887 - 35485994
Alignment:
Q  30 aaaataaagttaaattgtttcat-ataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||| | |||||| |||| |||||||||||||| |||| ||||| |  || || ||| ||||| | | ||||||| ||||||||||| ||    
T  35485887 aaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatc 35485986  T
Q  129 ataagttg 136  Q
    ||||||||    
T  35485987 ataagttg 35485994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 39983330 - 39983413
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcat 130  Q
    |||||||||| ||||||||||||||||||| ||||| | ||| ||| ||  |||||||| ||||| | |||||  |||||||||    
T  39983330 tttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttatagacatgtcat 39983413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 1160710 - 1160660
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| |||||||||  ||||||||||||| |||||||||| ||||||||    
T  1160710 gcttatggaaataaactaaaaacaacttatggacatgtcataggttgtttc 1160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 5133742 - 5133852
Alignment:
Q  30 aaaataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||| |||| |||||  ||||||  |||||| |||||||| ||  ||||| |||| |||||| ||||||| | ||||  | ||||||| ||||||    
T  5133742 aaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatggaaataagctgaaagtagcttatgaccatgtc 5133841  T
Q  129 ataagttgttt 139  Q
    |||||||||||    
T  5133842 ataagttgttt 5133852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 8017404 - 8017514
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||| ||||||||||| ||| ||||||| || |||  ||||||||||| ||||||| |||  |||||  |||||  | |||||||| |||||||||| ||    
T  8017404 aaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatc 8017503  T
Q  129 ataagttgttt 139  Q
    ||||| |||||    
T  8017504 ataagctgttt 8017514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 9750915 - 9750961
Alignment:
Q  29 aaaaataaagttaaattg-tttcatataaactataagttgttttcat 74  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||    
T  9750915 aaaaataaagttaaattgttttcttataagctataagttgttttcat 9750961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 28039432 - 28039322
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||||  |||||||| |||||||||||||||   ||||||||| || |||| ||    |||| ||||||| | ||||||| |||||||||| |||    
T  28039432 aaaataaagtccaattgttttcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaacaagtc 28039333  T
Q  129 ataagttgttt 139  Q
    |||| ||||||    
T  28039332 ataacttgttt 28039322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 33526004 - 33525951
Alignment:
Q  92 ttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatga 145  Q
    |||||||||||| | |||| ||||||||| |||||| |||||||||||| ||||    
T  33526004 ttatagaaataagctgaaaccaacttatggacatgttataagttgtttccatga 33525951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 35557174 - 35557121
Alignment:
Q  80 atcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||||||| | ||||| |||||| | ||||||| |||||||||||||||||||    
T  35557174 atcttagagagtttatataaataagcagaaaacagcttatgaacatgtcataag 35557121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 45314907 - 45314948
Alignment:
Q  98 aaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||| ||||||||||||| || ||||||||||||||||    
T  45314907 aaataaactgaaaacaacttataaatatgtcataagttgttt 45314948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 1056151 - 1056119
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| ||||||||||||||||||||||    
T  1056151 gaaaacaactaatgaacatgtcataagttgttt 1056119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 1893375 - 1893275
Alignment:
Q  35 aaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagt 134  Q
    ||||||||||| |||| || || ||||||| |||||||  || ||||||| |||  ||| |  |||||| | ||||| |||||||| |||||||||||||    
T  1893375 aaagttaaattatttcgtaaaagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataagt 1893276  T
Q  135 t 135  Q
    |    
T  1893275 t 1893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 1939395 - 1939323
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtt 138  Q
    ||||||||||| ||||  | ||| |||||| |||||||   ||||||| |||||| |||||||||||||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 4550765 - 4550793
Alignment:
Q  47 tttcatataaactataagttgttttcata 75  Q
    |||||||||||||||||||||||||||||    
T  4550765 tttcatataaactataagttgttttcata 4550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 5826219 - 5826291
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    ||||||||||||| |||||||| ||||| |||||   |||||| | |||||||  ||||| ||||||||||||    
T  5826219 taagttgttttcaaaaactatcatagagagcttacgtaaataagctgaaaacagtttatgcacatgtcataag 5826291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 19977995 - 19978031
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  19977995 gaaaacaacttatgaacgtgttataagttgtttctat 19978031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 29300615 - 29300719
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||| | |||||||| ||| |||  |||||||||||||||||| ||||| |  | ||||||| |||||||   ||||| | || |||||||||||    
T  29300615 aaaataaaggtgaattgttttcatgtaagttataagttgttttcataagctatccttaaatgcttatggaaataagtagaaaatagctaatgaacatgtc 29300714  T
Q  129 ataag 133  Q
    |||||    
T  29300715 ataag 29300719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 29510584 - 29510628
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttat 95  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||||||    
T  29510584 atataaactataagttgttttcctaagctatctttgagagcttat 29510628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 32614970 - 32614938
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||| |||||||||||||||||||||||    
T  32614970 gaaaacaacatatgaacatgtcataagttgttt 32614938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 40158706 - 40158798
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||| | |||||||||||||||||  |||  | ||| ||||||  || ||| | ||||||||||||| ||||||||||||| |||||    
T  40158706 tttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttt 40158798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 44443330 - 44443394
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||||||| ||||||| ||| || |||  |||||| | ||||||||||||||||||| ||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacatttcataa 44443394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 44606132 - 44606100
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||| ||||||||||||||||||    
T  44606132 gaaaacaacttatggacatgtcataagttgttt 44606100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 44151578 - 44151477
Alignment:
Q  32 aataaagttaaattgtttc-atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcat 130  Q
    |||||||| ||| |||||| |||||| |||||||||||||||||||||||||||  |  |||||| ||||||| | ||||||| |||||| |||||||||    
T  44151578 aataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcat 44151479  T
Q  131 aa 132  Q
    ||    
T  44151478 aa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 3610817 - 3610729
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||| ||||||||||||||| ||||||||| ||||| |||||||||||||| | |||||   |||||| ||||||||| || ||||||    
T  3610817 tataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaaaggcttatggacatgtcattagctgtttc 3610729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 20553093 - 20553213
Alignment:
Q  49 tcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagat 148  Q
    ||||| || |||||||||||||||| ||  |||| ||| | |||||| ||||||| | |||||||||||||||||||||| |||| |||||| || || |    
T  20553093 tcatacaagctataagttgttttcacaagttatcctagtgagcttatggaaataatctgaaaacaacttatgaacatgtcgtaagctgtttccataagct 20553192  T
Q  149 cttttgaacaatctcagaagt 169  Q
    ||  |||||| ||||| ||||    
T  20553193 ctcctgaacagtctcacaagt 20553213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 7244687 - 7244810
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaac-aatctca 164  Q
    ||||||||||| |||| || ||| ||||||  |||||| | ||||||||||||||| |||||||||| ||||||| || || |||||  ||| ||||| |    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaacaaatctta 7244786  T
Q  165 gaagtatttatgtcaatagataaa 188  Q
    ||||| |||||| || ||||||||    
T  7244787 gaagtgtttatggcagtagataaa 7244810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 27378910 - 27378836
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatga 121  Q
    |||||||||||||| ||  ||||||||||||||||| | ||| ||||||  |||||||| |||||||||||||||    
T  27378910 tttcatataaactacaatctgttttcataaactatcctggagagcttatgaaaataaactgaaaacaacttatga 27378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 2825308 - 2825235
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 125  Q
    |||||||||||||||||||||| || ||||| |||||  ||||| ||||||| | ||||| |||||||||||||    
T  2825308 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 2825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 4966156 - 4966273
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaaca 158  Q
    |||||| ||||||||||| | ||| |  || |||||| ||||||||| |||||||||||||| |||| |||||||| |||||||| || |||  | ||||    
T  4966156 tataagctgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagtggtttctataagctctcctaaaca 4966255  T
Q  159 atctcagaagtatttatg 176  Q
     ||||| |||||| ||||    
T  4966256 gtctcacaagtatgtatg 4966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 36537957 - 36538025
Alignment:
Q  108 aaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatg 176  Q
    ||||||||||||||||||||||||||||||||| || || ||| |  |||||||||| |||| ||||||    
T  36537957 aaaacaacttatgaacatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatg 36538025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 38010702 - 38010782
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    |||||||||| ||||||| ||||||||||| ||||| |||||  ||||| ||||||| |  |||||| |||||||||||||    
T  38010702 tttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 38010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 9423662 - 9423583
Alignment:
Q  61 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||| |||||| |||| ||||| | ||| |||| | ||||||| | |||||||||||||||||||||||||| |||||||    
T  9423662 taagctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgtttc 9423583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 30456550 - 30456475
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaa 104  Q
    |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||| ||| ||||||  |||||||    
T  30456550 aaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataaa 30456475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 11208437 - 11208530
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||||||||||||| ||||||||||||| ||||||| |     |||| ||||||| | |   |||||||||| ||||||||||||||||||||||    
T  11208437 tttcatataaactatatgttgttttcataagctatcttgggtattttatggaaataagctg---acaacttatggacatgtcataagttgtttctat 11208530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 24363671 - 24363601
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    |||||||||||||||||| ||||| | ||| | |||| ||||||| | |||||||||||||| ||||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 25296955 - 25297005
Alignment:
Q  31 aaataaagttaaattgttt-catataaactataagttgttttcataaacta 80  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||||    
T  25296955 aaattaagttaaattgttttcatataaactataagctgttttcataaacta 25297005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 35267382 - 35267436
Alignment:
Q  79 tatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||| ||| |||||||||||||| | ||||||||| |||||||||||||||||    
T  35267382 tatcttggagagcttatagaaataagctgaaaacaacctatgaacatgtcataag 35267436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 39568363 - 39568313
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||| ||||    
T  39568363 gcttacagaaataagccgaaaacaacttatggacatgtcataagttatttc 39568313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 39771755 - 39771841
Alignment:
Q  53 ataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||||||||||||||||   |||| ||||||||| || |||||||   ||||||| |||||| |||| |||||||||||||    
T  39771755 ataagctataagttgttttcataggttatcatagagtgctaatggaaataagttgaaaacagcttatggacatatcataagttgttt 39771841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 48157220 - 48157106
Alignment:
Q  30 aaaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||||||||| | ||||| |||||| ||||||||| || ||||    |||  ||||| ||||||| | ||||||| |||||| ||||| |    
T  48157220 aaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggc 48157121  T
Q  129 ataagttgtttctat 143  Q
    |||||||||||||||    
T  48157120 ataagttgtttctat 48157106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 42281577 - 42281500
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||||||| |||||   ||| |||||||||||||| | |||||||| ||||  |||||||||||| |||||||||    
T  42281577 tgttttcataagctatcactgagagcttatagaaataagctgaaaacaaattatttacatgtcataagctgtttctat 42281500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 19719007 - 19719086
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||||||| ||||||| ||   |||||| | |||| | |||||||  ||||||||||||||||||||||||    
T  19719007 tataagttgttttcataa-ctatcttggatcacttataaagataagctgaaaacagtttatgaacatgtcataagttgttt 19719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 25670668 - 25670576
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||| |||| | ||||||| ||||  |||||| ||| |||| |  |||||| | |||||||| |||| |||||||||||||||||||    
T  25670668 tttcatataagctatcaattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttt 25670576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 28844522 - 28844570
Alignment:
Q  91 cttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||| ||||||||| |||||||||| ||| ||||||||||||||||||    
T  28844522 cttatcgaaataaactgaaaacaactgatggacatgtcataagttgttt 28844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 37064324 - 37064218
Alignment:
Q  29 aaaaataaagttaaattgttt-catataaactat-aagttgttttcataaa--ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaaca 124  Q
    |||||||||||  |||||||| |||||||||| | |||||||||||||| |  ||||| ||||| ||||||  ||||||||  |||||||||||| ||||    
T  37064324 aaaaataaagtcgaattgttttcatataaactcttaagttgttttcatataagctatcatagagagcttatgaaaataaacttaaaacaacttat-aaca 37064226  T
Q  125 tgtcataa 132  Q
    ||||||||    
T  37064225 tgtcataa 37064218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 45859587 - 45859516
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||| |||||| |  || |||||||||||||| | ||||||||| ||||||||||||||| ||||||||    
T  45859587 ttttcatagactatcatgaagagcttatagaaataagctgaaaacaac-tatgaacatgtcatatgttgtttc 45859516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Original strand, 8341876 - 8341911
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttcta 142  Q
    |||||||||||||| |||||||||||||||||||||    
T  8341876 gaaaacaacttatggacatgtcataagttgtttcta 8341911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 9038119 - 9038221
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctcag 165  Q
    ||||||||||||||||| | |||  ||| |  |||||| | |||||||| |||||||||||||||||| ||||| ||| || |||| |||||| |||||     
T  9038119 tgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataagctgtttttataagttcttctgaacattctcat 9038217  T
Q  166 aagt 169  Q
    ||||    
T  9038218 aagt 9038221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 12234934 - 12234875
Alignment:
Q  84 tagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||| |||||| ||||||| | ||||||| |||||  ||||||||||||||||||||||    
T  12234934 tagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctat 12234875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 15075155 - 15075088
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatg 126  Q
    |||||||| ||||||||||||| ||||||| |||||| ||||||| |  |||||| |||||| |||||    
T  15075155 tataagttattttcataaactaccttagagagcttatggaaataagctaaaaacagcttatgtacatg 15075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 22296328 - 22296273
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatctt 84  Q
    |||||||||||||||| ||| | ||||| |||||| ||||||||||||||||||||    
T  22296328 aaaataaagttaaattattttcctataacctataaattgttttcataaactatctt 22296273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 33646023 - 33645901
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaa-caatctca 164  Q
    ||||||||||| ||||||  ||| |||||| ||||||| |  ||||||||||||  ||||||||||||||||||| || || ||| |  || || |||||    
T  33646023 tgttttcataagctatctg-gagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctctccaaccagtctca 33645925  T
Q  165 gaagtatttatgtcaatagataaa 188  Q
     |||| |||| |||||||||||||    
T  33645924 caagtttttacgtcaatagataaa 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 39630603 - 39630694
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaacc-gaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaaca 158  Q
    ||||| ||||||||||| ||| | |||| ||||||| || ||||||||||||| ||||||  ||||||||||| ||| || ||| |||||||    
T  39630603 ttttcgtaaactatcttggagagtttattgaaataagcctgaaaacaacttataaacatgctataagttgtttatataagctctcttgaaca 39630694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 44910574 - 44910661
Alignment:
Q  30 aaaataaagttaaa-ttgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaact 116  Q
    |||||||||| ||| || ||||| | || ||| ||||||||||||||||||||| | ||| |||| | ||||||| ||||||||||||    
T  44910574 aaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagcttgtggaaataagccgaaaacaact 44910661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 46082022 - 46082116
Alignment:
Q  47 tttcatataaactataagttgttttcataaac--tatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||  ||||||||||||||||| ||  |||  | ||| ||||||  |||||| | ||||||||||||||  |||||||||||||||||    
T  46082022 tttcatataagttataagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttt 46082116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 46825068 - 46825179
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttat-agaaataaaccgaaaa-caacttatgaacatg 126  Q
    |||||||||| ||||||||| ||||||| | ||||   |||||||||| ||||||| |||||||||| |||||||| |  |||| |||||  || |||||    
T  46825068 aaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagctaaaaaacaactcgtggacatg 46825167  T
Q  127 tcataagttgtt 138  Q
    ||||||||||||    
T  46825168 tcataagttgtt 46825179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 941559 - 941621
Alignment:
Q  78 ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| |||| |||||||||||||||   |||||  |||||| |||||||||||||||||||    
T  941559 ctatctcagagagcttatagaaataaatttaaaactgcttatggacatgtcataagttgtttc 941621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 12110330 - 12110440
Alignment:
Q  30 aaaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| |||||||||   ||||| ||||||| ||||||||||| |||||||  ||  |||||  |||||| |  ||||||  || ||||||||||    
T  12110330 aaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtc 12110429  T
Q  129 ataagttgttt 139  Q
    |||||||||||    
T  12110430 ataagttgttt 12110440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 20881730 - 20881680
Alignment:
Q  36 aagttaaattgtttca-tataaactataagttgttttcataaactatctta 85  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||||    
T  20881730 aagttaaattgtttccgtacaagctataagttgttttcataaactatctta 20881680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 20888426 - 20888384
Alignment:
Q  97 gaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||| | |||||||||||||||||||| ||||||||||||    
T  20888426 gaaataagctgaaaacaacttatgaacatggcataagttgttt 20888384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 22283844 - 22283754
Alignment:
Q  30 aaaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttat 119  Q
    ||||||||||||||||||||   ||| | ||||||  ||||||||||||| |||||||||  ||||| ||||||| | ||||||| |||||    
T  22283844 aaaataaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaaacagcttat 22283754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 47559675 - 47559601
Alignment:
Q  55 aaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtca 129  Q
    |||||||||| |||||||||||  ||| || |||  |||||  |||| | |||||||||||||||||||||||||    
T  47559675 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatgtca 47559601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 3501048 - 3500956
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||| |||||||||| ||||| ||||||| || |  || ||| ||||||| | ||||||| || ||| |||||||||||||| ||||    
T  3501048 tttcatataaaatataagttgtattcattaactatcctata-agcgtatggaaataagctgaaaacagctgatgtacatgtcataagttatttc 3500956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 76
Target Start/End: Complemental strand, 9527172 - 9527143
Alignment:
Q  47 tttcatataaactataagttgttttcataa 76  Q
    ||||||||||||||||||||||||||||||    
T  9527172 tttcatataaactataagttgttttcataa 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 28340943 - 28340878
Alignment:
Q  31 aaataaagttaaattgtt-tcatataaactataagttgttttcataaactatcttagagtgcttat 95  Q
    |||| |||| |||||||| |||||||| ||||||| ||||||||||| ||||| ||||| ||||||    
T  28340943 aaatgaagtcaaattgttgtcatataagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 39360023 - 39360104
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| |||||||| || ||||| | | | |||||| ||||||| | |||| ||||||||| | |||||||||||||||||    
T  39360023 tataagatgttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagttgtttc 39360104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 39907773 - 39907870
Alignment:
Q  30 aaaataaagttaaattgtttca-tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatg 126  Q
    ||||||| ||||||||||||   ||||| ||||||  |||||||||||||||||||||||  || ||  |||||| | ||||||| || |||||||||    
T  39907773 aaaataaggttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg 39907870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 44241830 - 44241903
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    ||||||||||||| |  |||  ||||| ||||||||||||||||||| |||||||  |  ||||||||||||||    
T  44241830 aaaataaagttaactatttttgtataacctataagttgttttcataagctatcttgaatagcttatagaaataa 44241903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 1645722 - 1645690
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||| |||||||||||||||||||    
T  1645722 gaaaacaacttataaacatgtcataagttgttt 1645690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 11048075 - 11048107
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||| |||||||||||||||||||||||||    
T  11048075 gaaaacagcttatgaacatgtcataagttgttt 11048107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 21247975 - 21248007
Alignment:
Q  108 aaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||||||||||||||||||| ||||    
T  21247975 aaaacaacttatgaacatgtcataagttatttc 21248007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 29290381 - 29290425
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttctatgagatctt 151  Q
    ||||||| |||||| ||||||||||||||||||| || |||||||    
T  29290381 gaaaacagcttatggacatgtcataagttgtttccataagatctt 29290425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 30535551 - 30535643
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||| ||||||| ||||| ||||| |||||||| ||  | |||  |||||| | ||||||| |||| |||||| |||||||||||||    
T  30535551 tttcgtataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagttgttt 30535643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 27546 - 27650
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |   || | | ||||||| | |||||||||||||   ||||||    
T  27546 aaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttggtaagcgtgtggaaataagctgaaaacaacttatagccatgtc 27645  T
Q  129 ataag 133  Q
    |||||    
T  27646 ataag 27650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 4558768 - 4558879
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||||||||| ||| ||||||  ||||||| ||||| ||||| ||||| ||||| |||||| |||||||||  ||||||||||||  |||  ||    
T  4558768 aaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataaactaaaaacaacttatagacacatc 4558867  T
Q  129 ataagttgtttc 140  Q
    ||||||| ||||    
T  4558868 ataagttatttc 4558879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 2458630 - 2458562
Alignment:
Q  65 ttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||| ||||| ||||| ||||| |||||| ||||||||| ||||||| |||||||||||| ||||||    
T  2458630 ttgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatgccataag 2458562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 10437855 - 10437934
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaa 109  Q
    |||||||||| ||| ||||| |||||| || ||||| | |||||||| ||||||| ||| |||||||||||||| |||||    
T  10437855 aaaataaagtcaaactgttttatataagctttaagtaggtttcataagctatcttcgagagcttatagaaataagccgaa 10437934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 38561724 - 38561807
Alignment:
Q  57 actataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||||||||||||||||  ||||| | | ||  |||||||| ||||||| ||| | || |||||||||||||||||    
T  38561724 actataagttgttttcataaactattatagagagttcatgaaaataaacggaaaacagcttgtaaatatgtcataagttgtttc 38561807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 39551309 - 39551198
Alignment:
Q  30 aaaataaagttaaattgt-ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    ||||||||| |||| ||| |||||| || ||||||||||||||||||| || || | ||| ||||||| ||||||    |||||| ||| || |||||||    
T  39551309 aaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtc 39551210  T
Q  129 ataagttgtttc 140  Q
    ||||||||||||    
T  39551209 ataagttgtttc 39551198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 2595097 - 2594987
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||||||||||||||||| | ||  | | ||||||||||||||||| ||   |||||   |||||   ||||| | ||||||||||||||||||||||    
T  2595097 aaaataaagttaaattgttttcgtactagccataagttgttttcataagctgcattagacaacttatgagaataagctgaaaacaacttatgaacatgtc 2594998  T
Q  129 ataagttgttt 139  Q
    |||||||||||    
T  2594997 ataagttgttt 2594987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 43704460 - 43704363
Alignment:
Q  47 tttcatataaactataagttgttttcata--aactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttcta 142  Q
    |||||||||||||||||||||||||||||  |  |||| |  |  |||||| ||||||| |  ||||||  |||||||||||||||||||||||||||    
T  43704460 tttcatataaactataagttgttttcataagagttatcctcaaaagcttatggaaataagcttaaaacagtttatgaacatgtcataagttgtttcta 43704363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 779124 - 779051
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||||||| ||| |  ||   ||||||   |||||||||||||||||||||||||||||||||    
T  779124 tgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgttt 779051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 4055679 - 4055602
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    ||||||||||| |||||| |||| |||||  ||||||| | |||||||  ||||| |||||||||||||| |||||||    
T  4055679 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctat 4055602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 7918513 - 7918436
Alignment:
Q  62 aagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||| ||| ||||||| ||| |||||| |||||||   | ||||| |||||||||||||| ||||||||||    
T  7918513 aagttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttt 7918436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 29973069 - 29973162
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaa-caacttatgaacatgtcataagttgttt 139  Q
    ||||| |||| ||||||||||||||||||| ||||| | ||| | |||| ||||||||| ||||| || ||| || ||||||| ||||||||||    
T  29973069 tttcacataagctataagttgttttcataagctatccttgagagtttatggaaataaactgaaaaccagcttttggacatgtcgtaagttgttt 29973162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 8062322 - 8062390
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatg 120  Q
    ||||| ||||||| ||||||||||| ||||||||||| | |||| ||||||| | ||||||| ||||||    
T  8062322 tataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 11059796 - 11059748
Alignment:
Q  28 caaaaataaagttaaattgtttcatataaactataagttgttttcataa 76  Q
    ||||||||| || |||||||||||||||| ||||| |||||||||||||    
T  11059796 caaaaataaggtcaaattgtttcatataagctataggttgttttcataa 11059748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 28769421 - 28769337
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcata 131  Q
    |||| ||||| ||||||| ||||||||||| |||| || ||| | |||| ||||||| | |||||||||||||| |||| |||||    
T  28769421 tttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 39866818 - 39866723
Alignment:
Q  47 tttcatataaactataagttgttttcataaa--ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||| ||||||||| ||||||||||| |  |||||||  || ||||||  |||||||| ||||||| |||||| |||||  ||||||||||||    
T  39866818 tttcataaaaactataaattgttttcatataagctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatgctataagttgtttc 39866723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 41336745 - 41336645
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtc 128  Q
    |||||| ||| ||||||||| ||||||||||| || |||||||||||| ||||||  ||| ||||   ||||||| | ||||||||||||| |||| |||    
T  41336745 aaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaaacaacttataaacaagtc 41336646  T
Q  129 a 129  Q
    |    
T  41336645 a 41336645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 41606953 - 41606893
Alignment:
Q  79 tatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| ||||| |||||| ||||||| | ||||||||||| ||||||||||||||| |||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgttt 41606893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 14949875 - 14949942
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    ||||||||| ||||| || || | |||||||||||| | ||||||| |||||| ||||||||||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagtt 14949942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 30389091 - 30389170
Alignment:
Q  51 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcat 130  Q
    |||||| ||||| | ||||||||||| || || |||||  |||||  |||||| | ||||||||||||||||||||||||    
T  30389091 atataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcat 30389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 34770862 - 34770921
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagag 88  Q
    |||||||||| ||||||||| ||| ||| ||||||||||||||||||| ||||| |||||    
T  34770862 aaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagag 34770921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 42215143 - 42215084
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 127  Q
    ||||||||| ||||||| ||| ||||||  |||||| | |||||||||||||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 3254259 - 3254305
Alignment:
Q  93 tatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||| | ||||||| ||||||||||||||||||| |||||    
T  3254259 tatagaaataagctgaaaacagcttatgaacatgtcataagctgttt 3254305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 4281594 - 4281628
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttct 141  Q
    ||||||||||||||||||||||||| |||||||||    
T  4281594 gaaaacaacttatgaacatgtcatatgttgtttct 4281628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 6509403 - 6509329
Alignment:
Q  30 aaaataaagttaaattgt-ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 103  Q
    |||||||||| ||||||| || |||||| ||||||| ||||||||||| ||||| | ||| |||||| |||||||    
T  6509403 aaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataa 6509329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 9956912 - 9956819
Alignment:
Q  30 aaaataaagttaaattgtttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaaca 124  Q
    |||||||||||  ||| |||| |||||  |||||||||||||||||| ||||||| |||  |||||  |||||| | |||||| |||||||||||    
T  9956912 aaaataaagttttatt-tttcctataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 11569527 - 11569417
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaaca 158  Q
    |||||| ||||||||||| ||||| | ||| | || |  |||||| | |||||||||||||| |||||||||||| |||||| || || ||| || ||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaaca 11569428  T
Q  159 atctcagaagt 169  Q
     ||||| ||||    
T  11569427 gtctcacaagt 11569417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 12851182 - 12851256
Alignment:
Q  65 ttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||| || || | ||| ||||||  |||||| ||||||||| ||||||||||||| ||||| |||||    
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttt 12851256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 16210986 - 16210932
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatct 83  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||| || ||||||    
T  16210986 aaaataaagttacattgttttcatataagctataagttgttttcaaaacctatct 16210932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 30191220 - 30191130
Alignment:
Q  50 catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||| ||||||| | |||| |||| ||||| |  | || |||| ||||||| | |||||||| || ||||||||||||||||||||||    
T  30191220 catataatctataagctattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttc 30191130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 30259121 - 30259195
Alignment:
Q  66 tgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||| ||||| |||||| |||  ||||| ||||||||| |||||||||||||  |||| ||||||| ||||||    
T  30259121 tgtttttataaattatcttggagaacttatggaaataaactgaaaacaacttatagacatatcataagctgtttc 30259195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 30277315 - 30277241
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataag 133  Q
    |||||| ||||||||||| ||||| ||||| | |||| ||||||| | ||||||||||||||  |||||| ||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatggccatgtcctaag 30277241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 7714230 - 7714323
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||| ||||||||||||||||||| | ||||||| ||| ||| ||  ||||||   ||||||| || ||  |||| ||||||||||||||    
T  7714230 tttcatatcaactataagttgttttcatgagctatcttggagagctcatgaaaataagttgaaaacagctcatcgacatttcataagttgtttc 7714323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 9834871 - 9834834
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatctt 84  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  9834871 tttcatataagctataagttgttttcataagctatctt 9834834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 10358617 - 10358654
Alignment:
Q  98 aaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  10358617 aaataaatcgaaaacgacttatgaacatgtcataagtt 10358654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 11185221 - 11185302
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||||||||||||| | | ||||| | ||| ||| || |||||||   ||||||||||||||||||||| ||||| ||||||    
T  11185221 tataagttgttttcgttagctatcatggagagctgatggaaataagttgaaaacaacttatgaacatgttataagatgtttc 11185302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 30918116 - 30918192
Alignment:
Q  62 aagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||| |||||||||  | |||| ||| |||||| ||||||| | |||||||||||||||| |||||| |||||||||    
T  30918116 aagttcttttcataagttttcttggagagcttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgttt 30918192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 1561325 - 1561405
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgtttctatgagatcttttgaacaatctcagaagtatttatgtcaatagataa 187  Q
    |||||||||||||| | || ||||||||||||| | |||| ||| |  |||||||||| |||| |||||| || |||||||    
T  1561325 gaaaacaacttatggatatatcataagttgtttttgtgagctctctcaaacaatctcacaagtgtttatgccattagataa 1561405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 4390261 - 4390293
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||||||||||||||||||| ||||||||||||    
T  4390261 gaaaacaacttatgaacatgccataagttgttt 4390293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 7918873 - 7918789
Alignment:
Q  30 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaaca 113  Q
    |||||||||||||||| ||| | | ||| ||||||||||||||||||| |||||||  || |||| | ||||||| | |||||||    
T  7918873 aaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaaca 7918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 8060669 - 8060733
Alignment:
Q  59 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaac 123  Q
    |||||| ||||||||||| | ||| ||||| |||||| ||||||| | ||||| |||||||||||    
T  8060669 tataagctgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaac 8060733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 8062493 - 8062553
Alignment:
Q  29 aaaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagag 88  Q
    ||||| ||||| ||||||||| ||||||| ||||||| |||| |||||| |||||||||||    
T  8062493 aaaaaaaaagtcaaattgttttcatataagctataagatgttctcataagctatcttagag 8062553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 8629504 - 8629536
Alignment:
Q  107 gaaaacaacttatgaacatgtcataagttgttt 139  Q
    ||||||||||||||| |||||||||||||||||    
T  8629504 gaaaacaacttatgatcatgtcataagttgttt 8629536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 13000463 - 13000415
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtt 138  Q
    |||||| ||||||| | ||||||||||| || |||||||||||||||||    
T  13000463 gcttatggaaataagctgaaaacaacttgtggacatgtcataagttgtt 13000415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 25869303 - 25869255
Alignment:
Q  92 ttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    |||| ||||||| | |||||||||||||| |||||||||||||| ||||    
T  25869303 ttatggaaataagctgaaaacaacttatggacatgtcataagttatttc 25869255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 28784856 - 28784793
Alignment:
Q  68 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataa 132  Q
    ||||||||| ||||||||||| |||| || |||||| | ||||| | ||||||||||||||||||    
T  28784856 ttttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttatgaacatgtcataa 28784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 29417786 - 29417698
Alignment:
Q  47 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 135  Q
    |||| ||||||||||||| ||||||||||||||||| | |||  ||||||  ||||| |  |||| | |||||||| || |||||||||    
T  29417786 tttcgtataaactataagatgttttcataaactatcattgagaacttatatgaataagctaaaaatagcttatgaaaatttcataagtt 29417698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 30627973 - 30627929
Alignment:
Q  58 ctataagttgttttcataaactatcttagagtgcttatagaaata 102  Q
    |||||||||||||||||||  |||||||||| |||||| ||||||    
T  30627973 ctataagttgttttcataagttatcttagagagcttatggaaata 30627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 31862486 - 31862570
Alignment:
Q  52 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttg 136  Q
    ||||| ||||||| |||||||||||  |||| ||||| ||||||  |||||| | ||||||| |||||| | | |||||||||||    
T  31862486 tataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagttg 31862570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 12755 - 12693
Alignment:
Q  78 ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||| |||||| ||  ||| | |||||||||||||| |||||||||||||||||||    
T  12755 ctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttc 12693  T

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Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 6533 - 6480
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| ||||||||| |||||||||||||  |||||||||| |||||||||||    
T  6533 gcttatggaaataaactgaaaacaacttatagacatgtcataggttgtttctat 6480  T

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Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 13553 - 13500
Alignment:
Q  90 gcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttctat 143  Q
    |||||| ||||||||| |||||||||||||  |||||||||| |||||||||||    
T  13553 gcttatggaaataaactgaaaacaacttatagacatgtcataggttgtttctat 13500  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 306329 - 306407
Alignment:
Q  62 aagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttc 140  Q
    ||||||||||||||| ||||| ||||| ||||||  || ||| | ||||||| ||||||  ||||||||||| ||||||    
T  306329 aagttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttc 306407  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 10659 - 10607
Alignment:
Q  87 agtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 139  Q
    |||| |||| ||||||| | |||||||||||||| ||||||||| ||||||||    
T  10659 agtgtttatggaaataagctgaaaacaacttatggacatgtcattagttgttt 10607  T

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