View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0631_low_33 (Length: 252)

Name: NF0631_low_33
Description: NF0631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0631_low_33
NF0631_low_33
[»] chr3 (54 HSPs)
chr3 (1-158)||(25191297-25191454)
chr3 (1-158)||(52138718-52138877)
chr3 (1-154)||(21995-22149)
chr3 (1-158)||(28245355-28245514)
chr3 (1-153)||(47233801-47233955)
chr3 (1-158)||(51447915-51448073)
chr3 (1-158)||(54278938-54279097)
chr3 (9-158)||(33272235-33272392)
chr3 (1-154)||(5168750-5168909)
chr3 (1-158)||(54128296-54128455)
chr3 (1-151)||(53519511-53519669)
chr3 (12-158)||(45728064-45728213)
chr3 (9-158)||(27917490-27917639)
chr3 (1-88)||(35033136-35033223)
chr3 (8-154)||(26490239-26490385)
chr3 (1-144)||(36820166-36820309)
chr3 (1-88)||(38060421-38060508)
chr3 (1-156)||(43694970-43695127)
chr3 (8-136)||(49503766-49503896)
chr3 (1-154)||(19736918-19737074)
chr3 (82-158)||(38850012-38850088)
chr3 (10-142)||(48734349-48734481)
chr3 (1-149)||(19757826-19757977)
chr3 (10-75)||(38850123-38850188)
chr3 (8-78)||(50960845-50960915)
chr3 (10-136)||(3186709-3186836)
chr3 (12-71)||(48953638-48953697)
chr3 (57-135)||(33307087-33307165)
chr3 (9-88)||(3987037-3987116)
chr3 (8-112)||(54425184-54425289)
chr3 (43-154)||(2340961-2341074)
chr3 (36-136)||(31337766-31337866)
chr3 (113-158)||(47542031-47542076)
chr3 (9-88)||(21200540-21200617)
chr3 (9-53)||(38181042-38181086)
chr3 (1-129)||(39600886-39601016)
chr3 (1-78)||(19676285-19676362)
chr3 (35-76)||(38430850-38430891)
chr3 (1-62)||(39235154-39235215)
chr3 (9-74)||(52679059-52679124)
chr3 (36-129)||(344951-345046)
chr3 (37-100)||(31454467-31454531)
chr3 (10-78)||(44134044-44134112)
chr3 (82-146)||(45236786-45236850)
chr3 (9-98)||(31453151-31453242)
chr3 (15-74)||(42510233-42510292)
chr3 (13-91)||(54365194-54365271)
chr3 (56-129)||(37227877-37227950)
chr3 (1-158)||(46140352-46140509)
chr3 (9-77)||(11581445-11581513)
chr3 (1-77)||(41842716-41842792)
chr3 (82-158)||(46568034-46568110)
chr3 (1-45)||(48508268-48508312)
chr3 (94-154)||(48953696-48953756)
[»] chr7 (64 HSPs)
chr7 (1-158)||(33072872-33073029)
chr7 (1-152)||(43281600-43281751)
chr7 (1-154)||(38606927-38607081)
chr7 (1-158)||(13859213-13859372)
chr7 (1-154)||(45836685-45836840)
chr7 (1-158)||(49029194-49029353)
chr7 (4-155)||(34869341-34869494)
chr7 (1-158)||(33350011-33350170)
chr7 (1-158)||(35906406-35906565)
chr7 (1-158)||(37617862-37618022)
chr7 (1-158)||(31005141-31005300)
chr7 (1-158)||(44855377-44855536)
chr7 (1-158)||(11593878-11594037)
chr7 (1-158)||(12841480-12841639)
chr7 (1-154)||(39906575-39906730)
chr7 (1-156)||(36651914-36652069)
chr7 (1-146)||(46356061-46356208)
chr7 (1-153)||(35559198-35559353)
chr7 (36-154)||(32630517-32630636)
chr7 (1-154)||(7272961-7273116)
chr7 (1-111)||(29650349-29650461)
chr7 (13-158)||(36514424-36514569)
chr7 (34-151)||(23404343-23404462)
chr7 (1-111)||(6374833-6374945)
chr7 (1-154)||(43491230-43491385)
chr7 (1-87)||(2885927-2886013)
chr7 (1-79)||(36869449-36869527)
chr7 (4-75)||(22349623-22349694)
chr7 (1-88)||(46014386-46014472)
chr7 (1-77)||(31682807-31682883)
chr7 (82-158)||(36869577-36869653)
chr7 (9-151)||(43282330-43282477)
chr7 (35-145)||(36136695-36136807)
chr7 (10-158)||(5335840-5335988)
chr7 (1-129)||(19262638-19262766)
chr7 (9-154)||(47848596-47848743)
chr7 (41-141)||(8492478-8492580)
chr7 (8-158)||(30200175-30200323)
chr7 (1-87)||(40169640-40169726)
chr7 (8-158)||(14593679-14593835)
chr7 (1-68)||(15682184-15682251)
chr7 (9-154)||(25579290-25579431)
chr7 (10-88)||(27021906-27021984)
chr7 (88-157)||(24598440-24598509)
chr7 (82-151)||(39811882-39811951)
chr7 (12-88)||(7189442-7189518)
chr7 (1-154)||(42187393-42187547)
chr7 (82-145)||(27021994-27022057)
chr7 (35-89)||(45558351-45558405)
chr7 (8-151)||(48736111-48736256)
chr7 (8-158)||(16013202-16013358)
chr7 (82-145)||(1523747-1523810)
chr7 (4-75)||(12966025-12966096)
chr7 (82-136)||(25731641-25731695)
chr7 (15-77)||(26742115-26742177)
chr7 (10-157)||(28020883-28021032)
chr7 (1-39)||(32631615-32631653)
chr7 (8-158)||(36101977-36102129)
chr7 (13-78)||(38920794-38920859)
chr7 (9-77)||(18605359-18605427)
chr7 (9-77)||(18637563-18637631)
chr7 (9-77)||(18650997-18651065)
chr7 (17-113)||(27893769-27893865)
chr7 (84-144)||(29653844-29653904)
[»] chr4 (72 HSPs)
chr4 (1-158)||(33227127-33227286)
chr4 (1-158)||(436147-436306)
chr4 (4-158)||(48622751-48622905)
chr4 (1-154)||(27450384-27450533)
chr4 (1-158)||(31960019-31960178)
chr4 (1-158)||(33191053-33191212)
chr4 (1-158)||(48174298-48174457)
chr4 (1-158)||(4440773-4440930)
chr4 (1-158)||(53707712-53707871)
chr4 (1-158)||(52569720-52569879)
chr4 (9-158)||(1777230-1777379)
chr4 (1-154)||(39100740-39100893)
chr4 (1-158)||(43433836-43434001)
chr4 (1-158)||(56375208-56375367)
chr4 (34-158)||(12494668-12494794)
chr4 (3-158)||(47265409-47265566)
chr4 (1-158)||(50286889-50287039)
chr4 (9-158)||(28236103-28236252)
chr4 (4-155)||(37773659-37773811)
chr4 (1-145)||(37797783-37797929)
chr4 (9-158)||(23906508-23906665)
chr4 (9-151)||(41009562-41009707)
chr4 (10-158)||(31458946-31459098)
chr4 (15-158)||(46583043-46583188)
chr4 (1-154)||(27983122-27983270)
chr4 (9-154)||(1793382-1793529)
chr4 (1-149)||(16002854-16003003)
chr4 (8-151)||(1211602-1211747)
chr4 (9-156)||(20591513-20591662)
chr4 (1-151)||(20601851-20602003)
chr4 (37-154)||(45205088-45205208)
chr4 (1-142)||(51421666-51421807)
chr4 (10-158)||(33709837-33709992)
chr4 (1-86)||(20192025-20192110)
chr4 (56-154)||(35690226-35690326)
chr4 (35-158)||(56224983-56225109)
chr4 (39-158)||(10775665-10775786)
chr4 (9-126)||(51252674-51252791)
chr4 (9-155)||(54470128-54470276)
chr4 (8-136)||(25257793-25257921)
chr4 (32-88)||(26037741-26037797)
chr4 (1-146)||(41192764-41192913)
chr4 (57-158)||(43070029-43070128)
chr4 (35-158)||(49987346-49987471)
chr4 (1-54)||(8286455-8286508)
chr4 (8-136)||(10208978-10209104)
chr4 (8-158)||(17900398-17900550)
chr4 (8-77)||(35555859-35555928)
chr4 (41-158)||(7092465-7092583)
chr4 (1-88)||(44047553-44047640)
chr4 (84-154)||(20105761-20105831)
chr4 (12-153)||(45423542-45423681)
chr4 (2-59)||(32479057-32479114)
chr4 (82-146)||(25967555-25967619)
chr4 (163-231)||(43435132-43435200)
chr4 (12-78)||(2588991-2589056)
chr4 (9-71)||(26356626-26356688)
chr4 (9-87)||(39708424-39708502)
chr4 (56-158)||(31403276-31403384)
chr4 (56-154)||(34233291-34233393)
chr4 (8-125)||(50471479-50471596)
chr4 (10-78)||(30621418-30621486)
chr4 (8-68)||(42285912-42285972)
chr4 (9-77)||(42639233-42639301)
chr4 (9-88)||(44360077-44360155)
chr4 (9-135)||(50662330-50662457)
chr4 (12-78)||(55768717-55768783)
chr4 (12-78)||(55832973-55833039)
chr4 (87-152)||(2588905-2588970)
chr4 (35-88)||(36557268-36557321)
chr4 (9-78)||(46372024-46372093)
chr4 (1-78)||(49738809-49738886)
[»] chr2 (47 HSPs)
chr2 (1-154)||(45367830-45367984)
chr2 (1-158)||(3865990-3866149)
chr2 (1-154)||(11992313-11992466)
chr2 (1-154)||(12734623-12734776)
chr2 (4-154)||(38429806-38429958)
chr2 (1-154)||(41197433-41197588)
chr2 (8-158)||(8180698-8180850)
chr2 (1-158)||(36183369-36183528)
chr2 (1-158)||(3243858-3244015)
chr2 (1-158)||(38452890-38453053)
chr2 (1-135)||(18424582-18424716)
chr2 (1-154)||(41763247-41763401)
chr2 (1-154)||(23997539-23997691)
chr2 (1-158)||(4807510-4807672)
chr2 (2-154)||(16097192-16097350)
chr2 (8-88)||(25834671-25834751)
chr2 (1-88)||(2610578-2610665)
chr2 (8-88)||(43752159-43752239)
chr2 (9-158)||(4598775-4598928)
chr2 (8-80)||(43238305-43238377)
chr2 (8-146)||(9578915-9579053)
chr2 (1-71)||(24583837-24583907)
chr2 (9-158)||(23714474-23714622)
chr2 (9-158)||(24102146-24102294)
chr2 (82-158)||(2610446-2610522)
chr2 (11-158)||(42092437-42092584)
chr2 (4-146)||(6237961-6238106)
chr2 (42-154)||(19337096-19337209)
chr2 (9-146)||(9556582-9556720)
chr2 (94-158)||(24583906-24583970)
chr2 (37-154)||(38434873-38434992)
chr2 (1-158)||(9647814-9647969)
chr2 (103-158)||(451931-451986)
chr2 (32-154)||(30743545-30743668)
chr2 (1-57)||(451853-451909)
chr2 (41-88)||(227312-227359)
chr2 (9-80)||(44437934-44438005)
chr2 (1-78)||(12141544-12141621)
chr2 (82-158)||(7825276-7825352)
chr2 (17-124)||(7615251-7615358)
chr2 (35-78)||(18958907-18958950)
chr2 (8-88)||(3481134-3481211)
chr2 (8-86)||(38860165-38860243)
chr2 (14-91)||(6218954-6219031)
chr2 (35-88)||(11412711-11412764)
chr2 (35-75)||(786833-786873)
chr2 (9-65)||(41858744-41858800)
[»] chr1 (51 HSPs)
chr1 (1-158)||(8671838-8671995)
chr1 (1-154)||(696191-696346)
chr1 (1-158)||(1210663-1210822)
chr1 (1-158)||(30202335-30202494)
chr1 (1-158)||(34792554-34792713)
chr1 (1-158)||(9592652-9592811)
chr1 (1-154)||(15085856-15086011)
chr1 (1-151)||(51601983-51602133)
chr1 (1-154)||(32082950-32083105)
chr1 (1-153)||(4001660-4001814)
chr1 (1-158)||(51440970-51441129)
chr1 (9-155)||(32231167-32231315)
chr1 (1-158)||(22090012-22090173)
chr1 (1-158)||(49347598-49347757)
chr1 (1-154)||(8391694-8391849)
chr1 (1-158)||(43240584-43240745)
chr1 (1-88)||(38807876-38807963)
chr1 (8-158)||(9509236-9509388)
chr1 (35-154)||(37463112-37463231)
chr1 (35-158)||(9599633-9599758)
chr1 (1-88)||(4029112-4029199)
chr1 (41-154)||(18469327-18469440)
chr1 (9-151)||(18793201-18793345)
chr1 (8-88)||(2544589-2544669)
chr1 (1-145)||(27848010-27848155)
chr1 (9-146)||(43423647-43423788)
chr1 (14-136)||(14226047-14226169)
chr1 (35-133)||(52561850-52561950)
chr1 (8-88)||(1661420-1661500)
chr1 (1-60)||(25979436-25979495)
chr1 (8-128)||(39140468-39140590)
chr1 (8-158)||(26016355-26016507)
chr1 (9-78)||(48431619-48431688)
chr1 (8-96)||(13827929-13828017)
chr1 (1-77)||(32404731-32404807)
chr1 (8-88)||(36340015-36340095)
chr1 (1-88)||(40416361-40416448)
chr1 (82-154)||(4379927-4379999)
chr1 (9-158)||(40419557-40419708)
chr1 (98-154)||(46226586-46226642)
chr1 (9-76)||(27637846-27637913)
chr1 (8-75)||(35828762-35828829)
chr1 (57-126)||(854052-854119)
chr1 (12-78)||(37263331-37263397)
chr1 (9-78)||(52073675-52073745)
chr1 (8-77)||(10272260-10272329)
chr1 (75-136)||(16142165-16142226)
chr1 (10-78)||(4380013-4380081)
chr1 (105-145)||(17275137-17275177)
chr1 (12-88)||(51812515-51812591)
chr1 (82-158)||(52442792-52442868)
[»] chr6 (32 HSPs)
chr6 (4-158)||(28085294-28085450)
chr6 (1-145)||(5258353-5258501)
chr6 (1-154)||(608081-608234)
chr6 (1-154)||(20427841-20427996)
chr6 (8-142)||(21352049-21352183)
chr6 (1-158)||(32755837-32755998)
chr6 (1-154)||(10100064-10100217)
chr6 (9-158)||(14030724-14030876)
chr6 (1-154)||(30031178-30031333)
chr6 (1-154)||(35043646-35043801)
chr6 (32-154)||(9706698-9706822)
chr6 (1-153)||(5631741-5631899)
chr6 (45-154)||(5080777-5080888)
chr6 (9-154)||(9593919-9594072)
chr6 (56-146)||(6056032-6056122)
chr6 (1-67)||(30679417-30679483)
chr6 (1-158)||(28027032-28027189)
chr6 (19-101)||(12890559-12890643)
chr6 (8-158)||(33083976-33084128)
chr6 (32-146)||(9568590-9568708)
chr6 (1-70)||(24665818-24665887)
chr6 (8-76)||(33496963-33497032)
chr6 (82-158)||(33998292-33998368)
chr6 (9-72)||(2689646-2689709)
chr6 (45-128)||(21870322-21870403)
chr6 (10-77)||(2079341-2079408)
chr6 (41-133)||(5095816-5095910)
chr6 (15-129)||(8364523-8364635)
chr6 (8-91)||(14389380-14389462)
chr6 (37-78)||(6641650-6641691)
chr6 (86-154)||(2065048-2065116)
chr6 (82-158)||(7150606-7150682)
[»] chr5 (42 HSPs)
chr5 (1-158)||(24178428-24178587)
chr5 (4-158)||(1275183-1275338)
chr5 (4-158)||(28977067-28977221)
chr5 (1-146)||(3301774-3301921)
chr5 (1-158)||(1287784-1287953)
chr5 (1-158)||(2075679-2075838)
chr5 (1-154)||(16347583-16347738)
chr5 (1-158)||(12492589-12492751)
chr5 (1-146)||(4496312-4496461)
chr5 (1-158)||(10639215-10639381)
chr5 (1-111)||(38684932-38685044)
chr5 (1-128)||(14665658-14665791)
chr5 (5-158)||(31636129-31636278)
chr5 (1-75)||(20456776-20456850)
chr5 (8-158)||(34272940-34273097)
chr5 (18-158)||(11002645-11002785)
chr5 (10-145)||(26884902-26885040)
chr5 (19-154)||(32516480-32516615)
chr5 (8-88)||(14749297-14749377)
chr5 (1-112)||(15168756-15168869)
chr5 (8-100)||(33667194-33667286)
chr5 (32-158)||(36215418-36215544)
chr5 (9-134)||(10082952-10083079)
chr5 (45-127)||(418236-418318)
chr5 (81-156)||(28186955-28187030)
chr5 (5-71)||(1525651-1525717)
chr5 (35-88)||(14667753-14667806)
chr5 (8-77)||(28676596-28676665)
chr5 (8-88)||(79503-79583)
chr5 (8-127)||(2712897-2713014)
chr5 (10-74)||(37065533-37065597)
chr5 (1-78)||(18351112-18351190)
chr5 (84-158)||(20318905-20318974)
chr5 (10-145)||(31906592-31906729)
chr5 (45-158)||(219702-219817)
chr5 (82-146)||(5305546-5305610)
chr5 (83-159)||(9234986-9235062)
chr5 (11-71)||(21952364-21952424)
chr5 (9-88)||(42199278-42199355)
chr5 (82-153)||(34039960-34040031)
chr5 (9-136)||(6888933-6889062)
chr5 (114-156)||(27998343-27998385)
[»] chr8 (50 HSPs)
chr8 (1-158)||(39946775-39946934)
chr8 (1-154)||(18125097-18125250)
chr8 (1-158)||(36545065-36545226)
chr8 (1-158)||(36565446-36565605)
chr8 (1-158)||(36395154-36395314)
chr8 (13-154)||(18752093-18752233)
chr8 (1-158)||(40813240-40813401)
chr8 (1-154)||(42854209-42854364)
chr8 (13-158)||(2796473-2796622)
chr8 (5-154)||(8879649-8879800)
chr8 (2-154)||(45419161-45419313)
chr8 (68-158)||(12492116-12492206)
chr8 (5-126)||(8932653-8932775)
chr8 (1-76)||(12491343-12491418)
chr8 (1-110)||(11523928-11524040)
chr8 (9-107)||(12796913-12797011)
chr8 (1-152)||(6510633-6510784)
chr8 (8-144)||(32043522-32043660)
chr8 (37-135)||(25985462-25985560)
chr8 (36-154)||(13986416-13986536)
chr8 (1-158)||(30748377-30748534)
chr8 (82-154)||(15215559-15215631)
chr8 (14-154)||(37077687-37077817)
chr8 (64-158)||(25288820-25288916)
chr8 (64-158)||(25300155-25300251)
chr8 (8-136)||(44681251-44681381)
chr8 (1-124)||(9695583-9695708)
chr8 (12-58)||(26905122-26905168)
chr8 (3-125)||(7046285-7046409)
chr8 (42-156)||(13171895-13172011)
chr8 (14-158)||(39953482-39953628)
chr8 (41-154)||(30113442-30113557)
chr8 (1-80)||(2776434-2776513)
chr8 (45-112)||(33666748-33666814)
chr8 (55-158)||(42493565-42493668)
chr8 (36-78)||(25985839-25985881)
chr8 (22-74)||(7103274-7103326)
chr8 (8-153)||(10080119-10080264)
chr8 (57-154)||(16351312-16351411)
chr8 (56-129)||(21121105-21121180)
chr8 (41-145)||(2518637-2518742)
chr8 (64-146)||(25439397-25439477)
chr8 (57-153)||(29520583-29520681)
chr8 (8-158)||(36143287-36143435)
chr8 (1-47)||(21121177-21121223)
chr8 (55-158)||(39760683-39760788)
chr8 (36-158)||(30456452-30456575)
chr8 (17-78)||(41444547-41444608)
chr8 (12-136)||(11129797-11129921)
chr8 (10-78)||(45512709-45512777)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-154)||(82643-82798)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-158)||(31386-31545)
scaffold0018 (8-78)||(44080-44150)
[»] scaffold0113 (1 HSPs)
scaffold0113 (10-158)||(11810-11962)
[»] scaffold0157 (1 HSPs)
scaffold0157 (34-158)||(25683-25809)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-119)||(1153-1271)
[»] scaffold0036 (1 HSPs)
scaffold0036 (2-156)||(4477-4634)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-154)||(86814-86967)
[»] scaffold0252 (1 HSPs)
scaffold0252 (163-222)||(20624-20683)


Alignment Details
Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 25191454 - 25191297
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25191454 atctacgggtcttctctctacatgtccaaaccatctaagtctattttcttccaatttttctactataggtgctacccccattctctctaatgatgtcatt 25191355  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25191354 cttaatcatatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgct 25191297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 52138877 - 52138718
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||| ||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  52138877 atctacaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 52138778  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  52138777 ttcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 52138718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22149 - 21995
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||  |||| || ||    
T  22149 atctacgggtcttctctctacatgtccaaaccatctaagcctattt-ctaccaacttttctactataggtgctacccccactctctctctaatggtgaca 22051  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22050 ttcctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 28245514 - 28245355
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  28245514 atctacgggttttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactataggtgctacccccactctctctctaatgatgtca 28245415  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||||||||  | |||||||||||||||||||| ||||||||| |||||| ||||    
T  28245414 ttcctaatcctatccaggctagtcttaccactcatccaacgcaacatcctcatctttgct 28245355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 47233801 - 47233955
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat--tctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||    
T  47233801 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacctccattctctctctaatggtgtca 47233900  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    ||  ||||| |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  47233901 tttctaatcttatcatgtctagtcttaccactcatccaacgcaatatcctcatct 47233955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 51447915 - 51448073
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat-tctctctaatgatgtcat 99  Q
    |||||||| ||||||||||||||| | |||  ||||||| |||||||||||||||||||||||||||||||||||||   | ||||||||||| ||||||    
T  51447915 atctacggatcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctaccctactctctctctaatggtgtcat 51448014  T
Q  100 tcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    || |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  51448015 tcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 51448073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 54279097 - 54278938
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtca 98  Q
    ||||||||||||||||||||| || | ||| | |||||| ||||||||||||||||||||||||||||||||||||||  |  ||||||||||| |||||    
T  54279097 atctacgggtcttctctctacgtgcccaaaccgtctaagcctattttctaccaacttttctactataggtgctacccctactctctctctaatggtgtca 54278998  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||| ||||| ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  54278997 ttcctaattctatcttgtctagtcttaccacttatccaacgcaacatcctcatctctgct 54278938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 33272235 - 33272392
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctac----tataggtgctaccccca----ttctctctaatgatgtcatt 100  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||||||||||||    |||||||||||||||||     ||||||||||| |||||||    
T  33272235 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatatataggtgctacccccactctctctctctaatggtgtcatt 33272334  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  33272335 cttaatcctatcatgtctagtcttaccactcatccaatgcaacatcctcatctctgct 33272392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 5168909 - 5168750
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca------ttctctctaatgat 94  Q
    |||||||||||||||||||||||||  ||| ||||||||  |||||||||||||||||||||| ||||||||||||||||       ||||||||||| |    
T  5168909 atctacgggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgctacccccactctctctctctctaatggt 5168810  T
Q  95 gtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||| |||||||||| ||||||||||||||  ||||||||||||||||| |||||||    
T  5168809 gtcattcctaatcctatcctgtctagtcttacctatcatccagcgcaacatcctcatctc 5168750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 54128455 - 54128296
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtca 98  Q
    |||||| |||||| |||||||||| | ||| || ||||| ||||||||||||| ||||||||||||||||||||||||  || ||||||||||| |||||    
T  54128455 atctacaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaacactctctctaatggtgtca 54128356  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||||||||  ||||||| |||||||||||| | ||||||||| |||||||||||    
T  54128355 ttcataatcctatcgcgtctagttttaccactcatcaaacgcaacatcctcatctctgct 54128296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 53519669 - 53519511
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactata------ggtgctacccccattctct--ctaatg 92  Q
    |||||||| |||||||| | |||||| ||| |||||||| |||||||||||||||||||||||||||      ||||||||||||| |||||  ||||||    
T  53519669 atctacggttcttctctattcatgtccaaaacatctaagcctattttctaccaacttttctactatatatataggtgctacccccactctctgtctaatg 53519570  T
Q  93 atgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
     ||||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||||    
T  53519569 gtgtcattcttaatcctatcctgtctagtattaccactcatccaacgcaacatcctcat 53519511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 45728213 - 45728064
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct---aatgatgtcattcttaatcc 108  Q
    ||||||||||||||| ||| ||||| |  ||| ||||||||||||||||||||||| |||||||||||| |||||||   ||||||||||||  ||||||    
T  45728213 ttctctctacatgtcaaaaccatctgatcctactttctaccaacttttctactatatgtgctacccccactctctctctaaatgatgtcatttctaatcc 45728114  T
Q  109 tatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||   |||| ||||||||||||||||||||||||||| |||||||||||    
T  45728113 tatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgct 45728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 27917639 - 27917490
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcc 108  Q
    ||||||| |||||||||| ||| |||||||| |||||| |||||| |||||||||||||||||||||||| | | |||||||||  ||||||| |||||     
T  27917639 gtcttctttctacatgtccaaaccatctaagcctatttcctaccatcttttctactataggtgctaccccaactttctctaatggggtcattcctaatca 27917540  T
Q  109 tatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     |||  |||||| ||||||||||||||| | ||||||| |||||||||||    
T  27917539 aatctcgtctaggcttaccactcatccaacacaacatcctcatctctgct 27917490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35033223 - 35033136
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  35033223 atctacgggtcttctctctacatgtccaaaccatataagcctattttctaccaacttttctactataggtgctacccccactctctct 35033136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 26490385 - 26490239
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    |||||| | |||||||||| ||| || ||||| ||||||||||||| |||||||||||||||||||||| | | ||| |||||||| ||||||  |||||    
T  26490385 ggtcttttatctacatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcaactctgtctaatgacgtcattgctaatc 26490286  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
     ||||  |||| ||||||||||||||||| ||||||||| |||||||    
T  26490285 atatcccgtcttgtcttaccactcatccaacgcaacatcctcatctc 26490239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36820166 - 36820309
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    ||||| ||||||||||| |||||||||||| || ||||| ||| |||| |||| |||| ||| ||||||||||||||| | |||||||||||  ||||||    
T  36820166 atctatgggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctaccccaactctctctaatgtcgtcatt 36820265  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaaca 144  Q
      ||||||||||  ||||||||||||||| |||||| |||||||    
T  36820266 tctaatcctatctcgtctagtcttaccacacatccaacgcaaca 36820309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38060508 - 38060421
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||| ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  38060508 atctacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctacccccactctctct 38060421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 43694970 - 43695127
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgcta-cccccattctctctaatgatgtcat 99  Q
    |||||| ||||||||||||||||| | ||| ||||||||   |||||||||||||||||||||||||||||||| |||||| |||||||     ||||||    
T  43694970 atctacaggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactataggtgctaccccccactctctct----ctgtcat 43695065  T
Q  100 tcttaatccta-----tcatgtctagtcttaccactcatccagcgcaacatcatcatctctg 156  Q
    || ||||||||     |||||||| ||||||||| ||||||| ||||||||| |||||||||    
T  43695066 tcctaatcctatcatgtcatgtctggtcttaccattcatccaacgcaacatcctcatctctg 43695127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 49503766 - 49503896
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacc--cccattctctctaatgatgtcattcttaa 105  Q
    ||||||||||||||||| | ||| || ||||| ||||||||||||| ||||||||||||||||||||||    |  ||||||||||| ||||||||  ||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacctgaactctctctctaatggtgtcattcccaa 49503865  T
Q  106 tcctatcatgtctagtcttaccactcatcca 136  Q
    |||||||  ||||||||||||||||||||||    
T  49503866 tcctatctcgtctagtcttaccactcatcca 49503896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 19737074 - 19736918
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat---tctctctaatgatgtc 97  Q
    |||||| |||||||||||| ||||   ||| || ||||  ||||||||||||| ||||||||||||||||||| ||||||    ||||||||||||| ||    
T  19737074 atctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgcccccaactctctctctaatgatttc 19736975  T
Q  98 attcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    | |  ||||| ||||  |||||||||||||||||||||| | |||||||||||||||    
T  19736974 acttctaatcgtatcccgtctagtcttaccactcatccaacacaacatcatcatctc 19736918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 38850088 - 38850012
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  38850088 tctctctcatgatgtcattcctaatcatatcatgtctagtcttactactcatccagcgcaacatcctcatctctgct 38850012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 48734349 - 48734481
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcct 109  Q
    ||||||||||||||| | ||| || ||||| ||||||||||||| || |||||||||| | |||||||| |  |||||||||| |||||||| ||||| |    
T  48734349 tcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctactatacgcgctaccccaacactctctaatggtgtcattcataatctt 48734448  T
Q  110 atcatgtctagtcttaccactcatccagcgcaa 142  Q
    |||  | ||||| |||||||||||||| |||||    
T  48734449 atcccgcctagttttaccactcatccaacgcaa 48734481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 19757977 - 19757826
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca---ttctctctaatgatgtc 97  Q
    |||||| |||||||||||| ||||   ||| || ||||  ||||||||||||| ||||||||||||||||||| ||||||    ||||||||||||| ||    
T  19757977 atctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgcccccaactctctctctaatgatttc 19757878  T
Q  98 attcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatc 149  Q
    | |  ||||| ||||  || ||||||||||||||||||| | ||||||||||    
T  19757877 acttctaatcgtatctcgtgtagtcttaccactcatccaacacaacatcatc 19757826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 38850188 - 38850123
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctac 75  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  38850188 tcttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactatatgtgctac 38850123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 50960845 - 50960915
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||||||||||||||| | ||| || ||||| ||||||||||||| ||||||||||||||||||||||||    
T  50960845 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacccc 50960915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 3186836 - 3186709
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctc--taatgatgtcattcttaatc 107  Q
    ||||||||||||||| | |||||||||| | |||||||||||||||||| | ||||||||||||||| ||| ||| ||  ||||| |||||||| |||||    
T  3186836 tcttctctctacatgcccaaatcatcta-gcctattttctaccaactttcccactataggtgctaccaccactctttccataatggtgtcattcctaatc 3186738  T
Q  108 ctatcatgtctagtcttaccactcatcca 136  Q
     ||||  | | ||||||||| ||||||||    
T  3186737 ttatcccgccaagtcttaccgctcatcca 3186709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 48953638 - 48953697
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtg 71  Q
    |||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  48953638 ttctctttacatgcccaaatcatctaagtttattttctaccaacttttctactataggtg 48953697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 33307165 - 33307087
Alignment:
Q  57 tttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatcc 135  Q
    |||||||||||||||||||||| | ||||||||||| |||| ||  ||||| |||||||| |||||||||||| |||||    
T  33307165 tttctactataggtgctaccccaactctctctaatgttgtcgtttctaatcttatcatgtttagtcttaccacacatcc 33307087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 3987116 - 3987037
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||||  | ||| || ||||||||| ||||||||| ||||||||||||||||| |||||| | |||||||    
T  3987116 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtgataccccaactctctct 3987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 54425184 - 54425289
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaa 105  Q
    ||||||||| ||||||||  ||||| |||||||||||||||||| |||||||||| ||||| || || || || |||||  |||||| |||||||| |||    
T  54425184 ggtcttctccctacatgttcaaatcttctaagtctattttctacaaacttttctattatagatgata-cctcactctcttcctaatggtgtcattcataa 54425282  T
Q  106 tcctatc 112  Q
    |||||||    
T  54425283 tcctatc 54425289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 2340961 - 2341074
Alignment:
Q  43 attttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgc 140  Q
    |||||| |||| ||||||||| |  |||||||||||  ||  |||||||||| | |||||  |||| |||||||||||||||||||||| ||||||  ||    
T  2340961 attttccaccatcttttctacgaatggtgctaccccaacaccctctctaatgttttcatttctaattctatcatgtctagtcttaccacacatccaatgc 2341060  T
Q  141 aacatcatcatctc 154  Q
    |||||| |||||||    
T  2341061 aacatcctcatctc 2341074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 31337766 - 31337866
Alignment:
Q  36 taagtctattttctaccaacttttctactataggtgctaccc-ccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatc 134  Q
    |||| ||| |||| |||| |||||||||||||||||||||||  | |||||||||||| ||||||| |||||||||||   |||||||||| ||| ||||    
T  31337766 taagcctagtttcaaccatcttttctactataggtgctacccaactttctctctaatgctgtcatt-ttaatcctatcccatctagtcttatcacacatc 31337864  T
Q  135 ca 136  Q
    ||    
T  31337865 ca 31337866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 47542031 - 47542076
Alignment:
Q  113 atgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  47542031 atgtctagtcttaccactcatccaacgcaacatcctcatctctgct 47542076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 21200617 - 21200540
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||||| | ||| || ||||||||| |||| |||| |||||||||  ||||||||||||| |||||||||    
T  21200617 gtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac--taggtgctaccccaattctctct 21200540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 38181042 - 38181086
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctacca 53  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  38181042 gtcttctctcaacatgtctaaatcatctaagtctaatttctacca 38181086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 39600886 - 39601016
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtca 98  Q
    |||||| |||||||||| |||||| | ||| || |||||  | ||||| |||| |||||||||||||||| |||||||  |  ||||||||||| |||||    
T  39600886 atctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactaccccaactctctctctaatgttgtca 39600985  T
Q  99 ttcttaatcctatcatgtctagtcttaccac 129  Q
    ||  ||||| ||||   ||||||||||||||    
T  39600986 tttctaatcttatcccatctagtcttaccac 39601016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19676285 - 19676362
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||| ||||||||||||||||| | | | || ||||| | |||||||| || ||||| ||||||||||||||||||    
T  19676285 atctacaggtcttctctctacatgccaataccacctaagccaattttctatcatcttttgtactataggtgctacccc 19676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 38430891 - 38430850
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacc 76  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  38430891 ctaagcctattttctaccatcttttctactataggtgctacc 38430850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39235215 - 39235154
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttcta 62  Q
    |||||| ||||||||||||||||| | ||| || ||||| ||||||||||||| ||||||||    
T  39235215 atctacaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 52679059 - 52679124
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgcta 74  Q
    |||||||||||||||||| |||||| |  || ||||||||| ||||||||||| |||||| |||||    
T  52679059 gtcttctctctacatgtccaaatcaccagagcctattttcttccaacttttctgctatagatgcta 52679124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 344951 - 345046
Alignment:
Q  36 taagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccac 129  Q
    |||| |||||||||| || ||||||||||||| ||||||||||  |  |||||||||||   |||||  ||||||||||  |||||||||||||||    
T  344951 taagcctattttctaacatcttttctactataagtgctaccccaactctctctctaatgtcatcatttctaatcctatctcgtctagtcttaccac 345046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 31454467 - 31454531
Alignment:
Q  37 aagtctattttctaccaacttttctactataggtgct-acccccattctctctaatgatgtcatt 100  Q
    ||||||| ||||||||| ||||||||||||||||||| |||  || ||||||||||| |||||||    
T  31454467 aagtctagtttctaccatcttttctactataggtgctaaccaacactctctctaatgttgtcatt 31454531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 44134044 - 44134112
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||| |||| ||||| ||| || |||||||||||||| |||| ||||||||||| ||| ||||||||    
T  44134044 tcttctatctagatgtccaaaccacctaagtctattttccaccatcttttctactagaggcgctacccc 44134112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 45236850 - 45236786
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||||||||||| |||||||  ||||| ||||  ||||||||||||||| |||||| |||||||||    
T  45236850 tctctctaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 45236786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 31453151 - 31453242
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttc-tactataggtgctacccccattctc-tctaatgatgtca 98  Q
    |||||||||||||||| | |||  | ||||||||| ||||||||| |||||| ||||||||||||| |||| | |||| ||||||| |||||    
T  31453151 gtcttctctctacatgccaaaacaacctaagtctagtttctaccatcttttcttactataggtgctgccccaactctcttctaatgttgtca 31453242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 42510233 - 42510292
Alignment:
Q  15 tctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgcta 74  Q
    |||||||||||| ||| || ||||| |||||||| || | ||||||||||||||||||||    
T  42510233 tctctacatgtccaaaccacctaagcctattttccactatcttttctactataggtgcta 42510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 54365194 - 54365271
Alignment:
Q  13 tctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaat 91  Q
    |||||||||||| | ||| || ||||| ||||||||  |||  ||||||||||||||||||||||| | ||||||||||    
T  54365194 tctctctacatgcccaaaccacctaag-ctattttccgccatattttctactataggtgctaccccaactctctctaat 54365271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 37227950 - 37227877
Alignment:
Q  56 ttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccac 129  Q
    |||||||| |||| |||||| || | |||||||||||  ||||||  |||||||||  ||||||||||||||||    
T  37227950 ttttctacgatagctgctactccaactctctctaatgtggtcatttctaatcctatattgtctagtcttaccac 37227877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 46140509 - 46140352
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||| ||||||||||||| ||||| ||| || || |||||| |||| |||  ||||||||||| | ||  |||||| | |||| |||||  ||||| |    
T  46140509 atctacaggtcttctctctatatgtccaaaccacctgagtctagtttccaccgtcttttctactacatgtattaccccaactctcactaatattgtcaat 46140410  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
      ||||| |||   |||||||||||| |  ||| ||  ||||||||||||||||||||    
T  46140409 tctaatcatataccgtctagtcttacaatacattcaaagcaacatcatcatctctgct 46140352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 11581513 - 11581445
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    |||||||||||||||  | ||| || ||||||||| ||||||||| |||||||| | ||||| ||||||    
T  11581513 gtcttctctctacatacccaaaccacctaagtctagtttctaccatcttttctattgtaggttctaccc 11581445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41842716 - 41842792
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    |||||| | ||||||||||||||  | ||| || ||||| ||  |||| |||| |||||||||||||||||||||||    
T  41842716 atctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtgctaccc 41842792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 46568110 - 46568034
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||| |||||||  |||| | |||  ||||||||||| ||| |||||| | ||||||| |||||||||||    
T  46568110 tctctctaatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctcatctctgct 46568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48508312 - 48508268
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctatt 45  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||    
T  48508312 atctacgggtcttctctctacatgcccaaaccatctaagcctatt 48508268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 48953696 - 48953756
Alignment:
Q  94 tgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    |||||||||||||||||||   || | ||||||| |||||||| ||||||||| |||||||    
T  48953696 tgtcattcttaatcctatctcatccaatcttaccgctcatccaacgcaacatcctcatctc 48953756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 33073029 - 33072872
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  33073029 atctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatt 33072930  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  33072929 cctaatcctatcttgtctagtcttaccactcatccaacgcaacatcatcatctctgct 33072872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 43281751 - 43281600
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  43281751 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatt 43281652  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatc 152  Q
    | |||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  43281651 cctaatcctatattgtctagtcttaccactcatccagcgcaacatcctcatc 43281600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 38607081 - 38606927
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctc-taatgatgtcat 99  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| ||||| ||||||    
T  38607081 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacctttctactataggtgctacccccactctctcttaatgttgtcat 38606982  T
Q  100 tcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38606981 tcctaatcctatcatgtctagtcttaccactcatccagcgcaacattatcatctc 38606927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 13859213 - 13859372
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  13859213 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 13859312  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  13859313 ttcctaatcctatcatgtctagtcttaccactcgtccaacgcaacatcctcatctctgct 13859372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 45836685 - 45836840
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  45836685 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 45836784  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  45836785 ttcctaatcctatcttgtctactcttaccactcatccagcgcaacatcctcatctc 45836840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 49029353 - 49029194
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  49029353 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 49029254  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||| || |||||| |||||||||||    
T  49029253 ttcctaatcctatcatgtctagtcttaccactcatccaacgtaacatcctcatctctgct 49029194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 34869494 - 34869341
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattc 101  Q
    ||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  34869494 tacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattc 34869395  T
Q  102 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctct 155  Q
     |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  34869394 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctct 34869341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 33350011 - 33350170
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||  ||||||| |||||    
T  33350011 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgcaacccccactctctctctaatggtgtca 33350110  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  33350111 ttcttaatcctatcatgtctagtcttaccactcatccaaggcaacatcctcatctctgct 33350170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 35906406 - 35906565
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||| |||   ||||||||||| |||||    
T  35906406 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtca 35906505  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  35906506 ttcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 35906565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 37618022 - 37617862
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctatttt-ctaccaacttttctactataggtgctacccccattctctct--aatgatgtc 97  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||  |||| ||||    
T  37618022 atctacgggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgctacccccactctctctctaatggtgtc 37617923  T
Q  98 attcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  37617922 attcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 37617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 31005300 - 31005141
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||| |    
T  31005300 atctacgggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtta 31005201  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  31005200 ttcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 31005141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 44855377 - 44855536
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||| ||| |||||   ||||||||||| |||||    
T  44855377 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtactatccccactctctctctaatggtgtca 44855476  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  44855477 ttcctaatcctatcatgtctagtcttaccactcatccagcacaacatcctgatctctgct 44855536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 11594037 - 11593878
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||   ||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||    
T  11594037 atctacgggtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactataggtgctacccccactctctctcaaatggtgtca 11593938  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  11593937 ttcctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 11593878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 12841480 - 12841639
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||| |||   |||||||||||  ||||    
T  12841480 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggggtca 12841579  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||    
T  12841580 ttcctaatcctatcatgtctagttttaccactcatccaacacaacatcctcatctctgct 12841639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 39906575 - 39906730
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    ||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| ||   ||||||||||| |||||    
T  39906575 atctatgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccctcactctctctctaatggtgtca 39906674  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||| ||||||||||||||||||||||| |||| |||| |||||||    
T  39906675 ttcctaatcctatcctgtctagtcttaccactcatccaacgcagcatcctcatctc 39906730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36652069 - 36651914
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    ||||||||||||||||||||||||   ||| |||||||| |||||||||||||||||||||||||| | ||| ||||| |  |||||||||| |||||||    
T  36652069 atctacgggtcttctctctacatgctgaaaccatctaagcctattttctaccaacttttctactatggatgccacccctaccctctctaatggtgtcatt 36651970  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctg 156  Q
    | |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  36651969 cctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 36651914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 46356061 - 46356208
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat--tctctctaatgatgtca 98  Q
    ||||||| |||||||||||||||| | ||| |||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  46356061 atctacgtgtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccccattctctctctgatggtgtca 46356160  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||| |||||||||| |||||||||||||||||||| || |||||||||    
T  46356161 ttcctaatcctatcctgtctagtcttaccactcattcaacgcaacatc 46356208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 35559198 - 35559353
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactat-aggtgctacccccattctctct--aatgatgtc 97  Q
    ||||| |||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||  |||| ||||    
T  35559198 atctaggggtcttctcactaaatgtccaaatcatctaagcctattttctaccaacttttctactataaggtgctacccccactctctctcaaatggtgtc 35559297  T
Q  98 attcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    |||| |||||||||||  |||  |||||||||||||||| ||||||||| ||||||    
T  35559298 attcctaatcctatcaaatctgatcttaccactcatccaacgcaacatcctcatct 35559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 32630636 - 32630517
Alignment:
Q  36 taagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatcatgtctagtcttaccactcat 133  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||| | ||| || |||||||||||||||||||||||||||||||    
T  32630636 taagcctattttctaccaacttttctactataggtgctacccccactctctctccaatggtatca-tcctaatcctatcatgtctagtcttaccactcat 32630538  T
Q  134 ccagcgcaacatcatcatctc 154  Q
    ||||| ||||||| |||||||    
T  32630537 ccagctcaacatcctcatctc 32630517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 7273116 - 7272961
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtca 98  Q
    |||||| |||||||||| |||||| | ||| |||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||  |||| | |||||    
T  7273116 atctacaggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgatactcccgttctctccctaaaggtgtca 7273017  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| ||||||||||  || |||||||||| |||||||||| ||||||| |||||||    
T  7273016 ttcctaatcctatcccgtgtagtcttaccgctcatccagcacaacatcctcatctc 7272961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29650461 - 29650349
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||| |||||| |||||||  |||| |||||    
T  29650461 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctgcccccactctctctcgaatggtgtca 29650362  T
Q  99 ttcttaatcctat 111  Q
    ||| |||||||||    
T  29650361 ttcctaatcctat 29650349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 36514424 - 36514569
Alignment:
Q  13 tctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatc 112  Q
    |||||||||||| | ||| || ||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||| |||| ||  |||| |||||    
T  36514424 tctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactctctctaatgttgtcctttctaattctatc 36514523  T
Q  113 atgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
      || |||||||||||| |||||| ||||||||| |||||||||||    
T  36514524 ccgtttagtcttaccacacatccaacgcaacatcctcatctctgct 36514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 23404462 - 23404343
Alignment:
Q  34 tctaagtctattttctaccaacttttctactataggtgctacccccattctctc--taatgatgtcattcttaatcctatcatgtctagtcttaccactc 131  Q
    |||||| ||||||||| ||||||||||||||||| ||| |||||||| ||||||  ||||| |||||||| |||||||||||||| |||||||||| |||    
T  23404462 tctaagcctattttctcccaacttttctactataagtgttacccccactctctccctaatggtgtcattcctaatcctatcatgtatagtcttaccgctc 23404363  T
Q  132 atccagcgcaacatcatcat 151  Q
    ||||||||||||||| ||||    
T  23404362 atccagcgcaacatcctcat 23404343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 6374945 - 6374833
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||| |||||||||||||||||   ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  6374945 atctactggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 6374846  T
Q  99 ttcttaatcctat 111  Q
    ||| |||||||||    
T  6374845 ttcctaatcctat 6374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 43491385 - 43491230
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||| |||| ||||||||||| |||||| | |||||  | |||| |||||    
T  43491385 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttatactataggtgttacccctactctctccccaatggtgtca 43491286  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| ||||| ||||   |||| ||||||| |||||||||| ||||||| |||||||    
T  43491285 ttcctaatcatatcccatctaatcttaccgctcatccagcacaacatcctcatctc 43491230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2885927 - 2886013
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctc 87  Q
    |||||||| ||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  2885927 atctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctc 2886013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36869449 - 36869527
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccc 79  Q
    |||||||||||||||||||||||| | ||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  36869449 atctacgggtcttctctctacatgaccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccc 36869527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 22349694 - 22349623
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctac 75  Q
    ||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  22349694 tacgggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtgctac 22349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 46014386 - 46014472
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||| |||||||||||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  46014386 atctatgggtcttctctctacatgtccaac-catctaagcctattttctaccaacttttctactataggtgcaacccccactctctct 46014472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31682807 - 31682883
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    |||||||||||||||||||||||  | ||| |||||||| ||||||||||||||||||||||||||| |||||||||    
T  31682807 atctacgggtcttctctctacatacccaaaccatctaagcctattttctaccaacttttctactatatgtgctaccc 31682883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 36869577 - 36869653
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||    
T  36869577 tctctctaatggtgtcattcctaatcctatcatgtccagtcttaccactcatccaacacaacatcctcatctctgct 36869653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 43282477 - 43282330
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct-----aatgatgtcattctt 103  Q
    |||||||||||||||| | || ||| ||||| ||| |||| ||| ||||||||||||||||||||||||| | |||||||     |||| |||||||  |    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctaccccaactctctctctctaaatgttgtcatttct 43282378  T
Q  104 aatcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    |||| |||||||||||| |||||||| |||| | ||||||||| ||||    
T  43282377 aatcatatcatgtctagacttaccacacatctaacgcaacatcctcat 43282330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 36136807 - 36136695
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactca 132  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  |  ||||||||||| |||||||| ||| ||||||   |||||||||||||| ||    
T  36136807 ctaagactattttctaccatcttttctactataggtgctaccccaactctctctctaatggtgtcattcctaaacctatcccttctagtcttaccaccca 36136708  T
Q  133 tccagcgcaacat 145  Q
    |||| | ||||||    
T  36136707 tccaacacaacat 36136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 5335988 - 5335840
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcct 109  Q
    ||||||||||| ||| | ||| || ||||||||| |||| |||| |||| ||||||||| ||||||||| | ||||||||||| | |||||  ||||       
T  5335988 tcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgctaccccaactctctctaatgttatcatttctaattgc 5335889  T
Q  110 atcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||  |||||||||||||||| ||| || ||||||||| |||||||||||    
T  5335888 attctgtctagtcttaccacacattcaacgcaacatcctcatctctgct 5335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 19262638 - 19262766
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||| |||||||||||||||||   ||| || ||||| | | ||||||||| ||||||||| |||||||||||||| | ||||||||||  |||||||    
T  19262638 atctacaggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgctaccccaactctctctaatattgtcatt 19262737  T
Q  101 cttaatcctatcatgtctagtcttaccac 129  Q
      |||  |||||||||||||| |||||||    
T  19262738 tctaactctatcatgtctagtattaccac 19262766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 47848743 - 47848596
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaat 106  Q
    |||||||||| ||||| | ||| || ||||| |||||||| |||| ||||||||||||||| |||||||| | |||||||  |||| | ||| |  | ||    
T  47848743 gtcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctaccccaactctctctctaatgttatcacttctgat 47848644  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||  ||||||||||||||| |||||| | ||||||| |||||||    
T  47848643 cctatcccgtctagtcttaccacacatccaacacaacatcctcatctc 47848596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 8492478 - 8492580
Alignment:
Q  41 ctattttctaccaacttttctactataggtgctacccccattctctc--taatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagc 138  Q
    ||||||||||||| | ||| ||||||||||| |||||| | ||||||  ||||| |||||||| ||||||||||  |||||||||| ||||||||||| |    
T  8492478 ctattttctaccatcatttttactataggtgttaccccaaatctctccctaatggtgtcattcgtaatcctatcccgtctagtcttgccactcatccaac 8492577  T
Q  139 gca 141  Q
    |||    
T  8492578 gca 8492580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 30200175 - 30200323
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    |||||||| | |||||| | |||||| ||||| ||| |||| |||| ||||||||||||||||| |||||  |  |||||||||| |||||||  |||||    
T  30200175 ggtcttctatttacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtgttaccctaa--ctctctaatgttgtcatttctaatc 30200272  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     ||||   |||| ||||||||| |||||| | ||||||| |||||||||||    
T  30200273 atatcccatctaatcttaccacacatccaacacaacatcctcatctctgct 30200323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40169726 - 40169640
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctc 87  Q
    ||||||| ||||| |||||||||| | ||| || ||||| |||||||| |||| ||||||||||||| |||||||||| ||||||||    
T  40169726 atctacgtgtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctaccccaattctctc 40169640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 14593835 - 14593679
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc------cattctctctaatgatgtcattc 101  Q
    ||||||||| ||||||| | |||||| ||||||||| |||||||||  ||||||||||||||||  |||||      |  ||||||||||| |||||||     
T  14593835 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 14593736  T
Q  102 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     |||| |  |   ||||||||||||||| |||||| ||||||||| |||||||||||    
T  14593735 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctcatctctgct 14593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15682251 - 15682184
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactatag 68  Q
    ||||| || |||||||||||| || ||||| |||||||| |||||| |||||||||||||||||||||    
T  15682251 atctatggatcttctctctacctgcctaaaccatctaagcctatttcctaccaacttttctactatag 15682184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 25579290 - 25579431
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctac-ccccattctctctaatgatgtcattcttaatc 107  Q
    |||||||||||||||  | ||| || ||||| |||||||| ||||  |||||| |||| |||||||| ||||| |||||||||||  ||||||  |||||    
T  25579290 gtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgctactccccactctctctaatgtggtcatttctaatc 25579389  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    |||     |||||| ||||||| |||||| ||||||||| |||||||    
T  25579390 cta-----tctagtattaccacacatccaacgcaacatcctcatctc 25579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 27021906 - 27021984
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||||| | ||| || ||||| ||| |||  ||||||||||||||||||||||||||||| | |||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctaccccaactctctct 27021984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 24598440 - 24598509
Alignment:
Q  88 taatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgc 157  Q
    ||||| |||||||| |||||||||||||||||  ||||||||||||||| | ||||||| || |||||||    
T  24598440 taatggtgtcattcctaatcctatcatgtctaaacttaccactcatccaacacaacatcctcgtctctgc 24598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 39811951 - 39811882
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||||||| ||||||  |||||||| ||||    
T  39811951 tctctctaatgttgtcatttctaatcctatcacgtctagtcttaccacacatccaaagcaacatcctcat 39811882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 7189442 - 7189518
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||| | ||| || |||||  |||||||||||| |||||||||||||||||| ||||| | |||||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgaccccaactctctct 7189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 42187547 - 42187393
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtca 98  Q
    |||||| || ||||||| |||||| | ||| || ||||| |||||||| |||| |||||||| ||||||||||||||| | ||||  ||||||| || ||    
T  42187547 atctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctaccccgactctctttctaatgctgcca 42187448  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||  ||||  ||||  |||||||||||| || |||||| | ||||||| |||||||    
T  42187447 tttctaat-atatcccgtctagtcttactacacatccaacacaacatcctcatctc 42187393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 27021994 - 27022057
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||| ||| ||||||  |||||||    
T  27021994 tctctctaatgttgtcatttttaatcctatcctgtctagtcttatcacacatccaatgcaacat 27022057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 45558405 - 45558351
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctctcta 89  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| | ||||||||    
T  45558405 ctaagtcgagtttctaccaacttttctactataggtggtaccccaactctctcta 45558351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 48736111 - 48736256
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctc--taatgatgtcattcttaa 105  Q
    ||||||| |||||||||   ||| || ||||||||| ||||| ||| |||||||||| ||||||||||||| | ||||||  |||||  ||||||  |||    
T  48736111 ggtcttcgctctacatgagcaaaccacctaagtctagtttctcccatcttttctactgtaggtgctaccccaactctctctataatgtcgtcatttctaa 48736210  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    |  ||||   |||||||||||||| ||| || ||||||||| ||||    
T  48736211 ttttatctcatctagtcttaccacacattcaacgcaacatcctcat 48736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 16013358 - 16013202
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc------cattctctctaatgatgtcattc 101  Q
    ||||||||| ||||||| | |||||| ||||||||| |||||||||  |||| |||||||||||  |||||      |  ||||||||||| |||||||     
T  16013358 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttgtactataggtgtcaccccagctcactctctctctaatgttgtcattt 16013259  T
Q  102 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     ||||    |   ||||||||||||||| |||||| ||||||||| |||||||||||    
T  16013258 ctaatttggttccgtctagtcttaccacacatccaacgcaacatcctcatctctgct 16013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 1523810 - 1523747
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||  ||||||| || ||||||||    
T  1523810 tctctctaatggtgtcattaataatcctatcacgtctagtcttgtcactcatgcaacgcaacat 1523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 12966096 - 12966025
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctac 75  Q
    ||||||||||||||||||||| | ||| || |||||  || |||| |||| ||||||| |||||||||||||    
T  12966096 tacgggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctac 12966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 25731641 - 25731695
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatcca 136  Q
    ||||||||| | |||||||||||||||| ||  |||||||||||||| |||||||    
T  25731641 tctctctaaaggtgtcattcttaatcctttctcgtctagtcttaccattcatcca 25731695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 26742115 - 26742177
Alignment:
Q  15 tctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    |||||||||||  ||| || ||||  |||||||| |||| |||||||||||||||||||||||    
T  26742115 tctctacatgttcaaaccacctaatcctattttccaccatcttttctactataggtgctaccc 26742177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 28021032 - 28020883
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattc--tctctaatgatgtcattcttaatc 107  Q
    ||||||||||||||| | ||| || ||||| | | |||| |||| ||||||||| ||| |||||||||| | ||  ||||||||| | |||||   ||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctaccccaactctttctctaatgttatcatttcgaatc 28020933  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgc 157  Q
     ||||||||| ||||||| ||| |||| |  |||||||| || |||||||    
T  28020932 atatcatgtccagtcttatcacacatctaatgcaacatcttcctctctgc 28020883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32631653 - 32631615
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaag 39  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  32631653 atctacgggtcttctctctacatgtccaaaccatctaag 32631615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 36101977 - 36102129
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattct--ctctaatgatgtcattcttaa 105  Q
    ||||||||||||||||  | ||| || ||||| |||||||| | || |||||||| |||||||||||||  || |||  ||| |||| |||||||  |||    
T  36101977 ggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctaccttcactcttcctcaaatgttgtcatttctaa 36102076  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||  |||   |||||||||||||| |||| | | ||||||  |||||||||||    
T  36102077 tctcatcccatctagtcttaccacacatcgaactcaacattttcatctctgct 36102129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 38920859 - 38920794
Alignment:
Q  13 tctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||||||||| | ||| ||  |||| ||| |||| |||| ||||||||||||||||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctacccc 38920794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 18605359 - 18605427
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    ||||||||||||||||   ||| || |||||| || ||||||||| ||||| || ||||||||||||||    
T  18605359 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18605427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 18637631 - 18637563
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    ||||||||||||||||   ||| || |||||| || ||||||||| ||||| || ||||||||||||||    
T  18637631 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18637563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 18651065 - 18650997
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    ||||||||||||||||   ||| || |||||| || ||||||||| ||||| || ||||||||||||||    
T  18651065 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18650997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 27893769 - 27893865
Alignment:
Q  17 tctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatca 113  Q
    |||||||||  ||| || ||||| |||||||| |||| || |||||||||||||| |||| | | ||||||||||  |||| ||  |||||||||||    
T  27893769 tctacatgttcaaaccacctaagcctattttccaccatctattctactataggtgttacctcaactctctctaatattgtcgtttctaatcctatca 27893865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 29653844 - 29653904
Alignment:
Q  84 tctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaaca 144  Q
    |||||||||||||||||  |||| |||||  ||||||| ||||||| |||||| |||||||    
T  29653844 tctctaatgatgtcatttctaattctatcccgtctagtgttaccacacatccaacgcaaca 29653904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 33227286 - 33227127
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    |||||||||||||||||||||||| | |||  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||    
T  33227286 atctacgggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 33227187  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33227186 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgct 33227127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 436306 - 436147
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  436306 atctacaggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 436207  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  436206 ttcttaatcctatcatgtctagtcttacgactcatccaacgcaacatcctcatctctgct 436147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 48622751 - 48622905
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattctt 103  Q
    ||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |    
T  48622751 tacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctacccccactctctctaatggtgtcattcct 48622850  T
Q  104 aatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  48622851 aatcctatcatgtctagtcttaccactcatccaaagcaacatcctcatctctgct 48622905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 27450384 - 27450533
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27450384 atctacgggtcttctctctacatgtcaaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatt 27450483  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
        || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  27450484 ----attctatcatgtctagtcttaccactcatccagcgcaacatcctcatctc 27450533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 31960019 - 31960178
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  31960019 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 31960118  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  31960119 ttcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 31960178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 33191053 - 33191212
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | |||  ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  33191053 atctacgggtcttctctctacatgcccaaacaatctaagtctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 33191152  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| | |||| |||||||||||||||||||||||||| |||||||||||    
T  33191153 ttcctaatcctatcctatctaatcttaccactcatccagcgcaacatcctcatctctgct 33191212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 48174298 - 48174457
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||||   ||||||||||| |||||    
T  48174298 atctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtca 48174397  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  48174398 ttcctaatcatatcatgtctagtcttaccactcatccaacgcaacatcctcatctttgct 48174457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4440930 - 4440773
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||| ||| | ||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| || ||||    
T  4440930 atctacgggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctgcccccactctctctaatggtgccatt 4440831  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||||||||||||||||||||||||||| | ||||||||| | |||||||||    
T  4440830 cctaatcctatcatgtctagtcttaccactcatcgaacgcaacatcctaatctctgct 4440773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 53707871 - 53707712
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||| |||||    
T  53707871 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacctccactctctttctaatggtgtca 53707772  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| || ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  53707771 ttcctagtcctatcatgtctagtcttactactcatccaacgcaacatcctcatctctgct 53707712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 52569720 - 52569879
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  52569720 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 52569819  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| |||||||||||||| |||||||| | ||||||| | |||||||||    
T  52569820 ttcctaatcctatcctgtctagtcttacccctcatccaacacaacatcctgatctctgct 52569879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 1777230 - 1777379
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcc 108  Q
    |||||||||||| ||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||| ||||||    
T  1777230 gtcttctctctagatgtccaaaccatctaagcctattttctaccaacttttttactataggtgctatttccactctctctaatggtgtcattcctaatcc 1777329  T
Q  109 tatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  1777330 tatcatgtctagtcttaccactcatccaacgcaacatcctcatctttgct 1777379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 39100740 - 39100893
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||| ||||||||||||||||  ||| |||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  39100740 atctacggatcttctctctacatgttcaaaccatctaagcctattttctatcaacttttcttctataggtgctacccccactctctctaatggtgtcatt 39100839  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    | |||||||||||| ||||||||||||||||||   |||||||||| |||||||    
T  39100840 cctaatcctatcatttctagtcttaccactcatttggcgcaacatcctcatctc 39100893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 43434001 - 43433836
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--------ttctctctaatg 92  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||         |||||||||||    
T  43434001 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctctctaatg 43433902  T
Q  93 atgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     |||||||| |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||    
T  43433901 gtgtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgct 43433836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 56375367 - 56375208
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| || ||||||||||||||||||| |||||||||||||||  |  ||||||||||| |||||    
T  56375367 atctacgggtcttctctctacatgcccaaaccatctaagcctgttttctaccaacttttctattataggtgctacccctactctctctctaatggtgtca 56375268  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  56375267 ttcctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 56375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 12494794 - 12494668
Alignment:
Q  34 tctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatcatgtctagtcttaccactc 131  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||| |||||||||||||||||||||||||||||    
T  12494794 tctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactc 12494695  T
Q  132 atccagcgcaacatcatcatctctgct 158  Q
    ||||| ||||||||| |||||||||||    
T  12494694 atccaacgcaacatcctcatctctgct 12494668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 47265409 - 47265566
Alignment:
Q  3 ctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctcta--atgatgtcatt 100  Q
    ||||| |||||||||||||||| | |||||||||||  ||||||||||| | ||||||||||||||||| |||||||| ||||||||  ||| |||||||    
T  47265409 ctacgtgtcttctctctacatgcccaaatcatctaaacctattttctactaccttttctactataggtgttacccccactctctctataatggtgtcatt 47265508  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | ||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  47265509 cataatcttatcatgtctagtcttaccactcatccagcgcaacatcctcatctttgct 47265566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 50287039 - 50286889
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||     ||||  ||||||||||| |||||||    
T  50287039 atctacgggtcttctctctacatgcccaaaccatccaagtctattttctaccaacttttctactataggt-----cccc--tctctctaatggtgtcatt 50286947  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  50286946 cctaatcctatcatgtctagtcttaccactcatccaacgcaacttcctcatctctgct 50286889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 28236252 - 28236103
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcc 108  Q
    |||||||||||||||| | ||| |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctacccccactctctctaatggtgtcattcctaatcc 28236153  T
Q  109 tatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||| |||| |||||||| |||||||  ||| |||||| |||||||||    
T  28236152 tatcatatctaatcttaccattcatccaatgcagcatcataatctctgct 28236103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 37773659 - 37773811
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccc-attctctctaatgatgtcattct 102  Q
    |||||||| ||| |||||||| | ||| |||||||| |||||||||||| |||||||||||||||||||||||||  | ||||||||||| | ||||||     
T  37773659 tacgggtcgtctatctacatgcccaaaccatctaagcctattttctaccgacttttctactataggtgctaccccttactctctctaatggtatcattca 37773758  T
Q  103 taatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctct 155  Q
    |||| ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  37773759 taattctatcatgtctagtcttaccactcatccagcgcaacattctcatctct 37773811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37797929 - 37797783
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||  ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||| |||   ||||||||||| |||||    
T  37797929 atctacgaatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtca 37797830  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    ||  ||||| ||||||||||||||||| |||||||||| ||||||||    
T  37797829 tttctaatcttatcatgtctagtcttatcactcatccaacgcaacat 37797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 23906508 - 23906665
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctc--------tctaatgatgtcatt 100  Q
    ||||||||||||||||   ||| |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||        ||||||| |||||||    
T  23906508 gtcttctctctacatgctcaaaccatctaagcctattttctacaaacttttctactataggtgctacccccactctctctctctctctaatggtgtcatt 23906607  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||    
T  23906608 cctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgct 23906665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 41009562 - 41009707
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttct-accaacttttctactataggtgctacccccattctctc--taatgatgtcattcttaa 105  Q
    ||||||| ||||||||   ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||  |||||||||||||  |||    
T  41009562 gtcttctttctacatgcacaaaccatctaagtctatttttttaccaacttttctactataggtgctacccccattatctccctaatgatgtcatttctaa 41009661  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||    
T  41009662 tcctaccatgtctagtcttaccgatcatccaacgcaacatcctcat 41009707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 31459098 - 31458946
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattct----ctctaatgatgtcattcttaa 105  Q
    |||||||| |||||| | ||| || ||||| ||||||||||||| |||||||||||||||||||||| | | |||    |||||||| | |||||| |||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcgactctgtctctctaatggtatcattcctaa 31458999  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||    
T  31458998 tcctatcatgtctagtcttaccactcaaccaacgcaacatcctcatctgtgct 31458946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 46583043 - 46583188
Alignment:
Q  15 tctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatc 112  Q
    |||||||||| | ||  |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||  |||| |||||||| |||||||||     
T  46583043 tctctacatgcccaacccatctaagcctattttctaccaacttttctactataggtgctatccccactctctctcgaatggtgtcattcctaatcctatg 46583142  T
Q  113 atgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     |||||||||||||||||  || |  |||||||| |||||||||||    
T  46583143 ctgtctagtcttaccacttctctaatgcaacatcctcatctctgct 46583188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 27983270 - 27983122
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    ||||||| |||||||||||||||||  ||| |||||||| |||       ||||||||||||||||||||||||||| || |||||||  |||| |||||    
T  27983270 atctacgagtcttctctctacatgttcaaaccatctaagccta-------ccaacttttctactataggtgctaccctcactctctctctaatggtgtca 27983178  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||    
T  27983177 ttcctaatcctatcatgtatagtcttaccactcatctagcacaatatcctcatctc 27983122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 1793529 - 1793382
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaat 106  Q
    |||||||||||||||||| ||| ||||||||  |||||||||||||||||| |||||||||||||||||||  |||||  |||||| |||||||| ||||    
T  1793529 gtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactataggtgctacccccgctctctccctaatggtgtcattcctaat 1793430  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    | ||||  ||  |||||||||  ||||||| | ||||||| |||||||    
T  1793429 cttatcccgttaagtcttaccgttcatccaacacaacatcctcatctc 1793382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 16003003 - 16002854
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctcta--atgatgtca 98  Q
    |||||||||||||||||||| |||| | || |||||||| |||||||||| |||||||| ||| |||||||| | || || || |||||  ||| |||||    
T  16003003 atctacgggtcttctctctaaatgt-tcaaccatctaagactattttctatcaacttttataccataggtgccatcctcactcactctataatggtgtca 16002905  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatc 149  Q
    ||| |||||||||   |||||||||||||||||||||||| ||||||||||    
T  16002904 ttcctaatcctatttcgtctagtcttaccactcatccagcacaacatcatc 16002854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 1211602 - 1211747
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaag--tctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaa 105  Q
    ||||||||||||||||  | ||| ||| ||||  | ||||| |||||||||| | ||||||||||||| | |||| |||||| |||| |||||||| |||    
T  1211602 ggtcttctctctacattcccaaaccatttaagcatatatttcctaccaacttgtttactataggtgctgctcccactctctcgaatggtgtcattcctaa 1211701  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    || ||||||||||||| ||||||||||||||| |||||||| ||||    
T  1211702 tcatatcatgtctagttttaccactcatccagtgcaacatcctcat 1211747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 20591513 - 20591662
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaat 106  Q
    |||||||||||||||| | ||| |||||||   |||||||||||||||||||||||||| |||||||||||| |||||  |||||| ||||||||| |||    
T  20591513 gtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctactataagtgctacccccactctctccctaatggtgtcattctcaat 20591612  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctg 156  Q
    |  ||   |||||||||||| | ||||||||| ||||||| |||| ||||    
T  20591613 ctaattccgtctagtcttactattcatccagcacaacatcctcatatctg 20591662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20601851 - 20602003
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtca 98  Q
    |||||| |||||||||||||||||   ||| |||||||  ||||||||||||||||||||||||||| ||| || | ||| |||||  ||| || |||||    
T  20601851 atctacaggtcttctctctacatgcacaaaccatctaatcctattttctaccaacttttctactataagtgttatctccactctctccctagtggtgtca 20601950  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    |||| ||| ||||||||| | |||||| | |||||||||||||||||| ||||    
T  20601951 ttctcaattctatcatgtattgtcttagcgctcatccagcgcaacatcctcat 20602003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 45205088 - 45205208
Alignment:
Q  37 aagtctattttctaccaacttttctactataggtgctacccccat-tctctc--taatgatgtcattcttaatcctatcatgtctagtcttaccactcat 133  Q
    ||||||||||||||||| |||||||||||||||  |||||||||  ||||||  ||||| |||||||| ||||||||||  |||||||||||||||||||    
T  45205088 aagtctattttctaccatcttttctactataggcactacccccaactctctcgttaatggtgtcattcctaatcctatcccgtctagtcttaccactcat 45205187  T
Q  134 ccagcgcaacatcatcatctc 154  Q
    ||| | ||||||| |||||||    
T  45205188 ccaacacaacatcctcatctc 45205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 51421807 - 51421666
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||| |||||||||| || ||| | ||| || ||||| |||||||||| || ||  ||||||||| |||||||||| |  |||||||||| |||||||    
T  51421807 atctaccggtcttctctgtatatgcccaaaccacctaagcctattttctatcatctaatctactatatgtgctaccccaacactctctaatggtgtcatt 51421708  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaa 142  Q
    | ||||||||||  |||||||||||| ||||||||| |||||    
T  51421707 cataatcctatctcgtctagtcttactactcatccaacgcaa 51421666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 33709992 - 33709837
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaatc 107  Q
    ||||||||| ||||| ||||| || ||||  ||| |||| |||| ||||||||||||||||| |||||| | |||||||  |||| || ||||  |||||    
T  33709992 tcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttaccccaactctctctctaatgttgccatttctaatc 33709893  T
Q  108 ctatc-----atgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||     ||||||||||||||||| |||||| |||||||||||||||||||||    
T  33709892 ctatcctatcatgtctagtcttaccacacatccaacgcaacatcatcatctctgct 33709837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20192110 - 20192025
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct 86  Q
    |||||||||||||||||||||||| | |||  |||||||  ||||||||| |||||||||||||||| |||||||||||| |||||    
T  20192110 atctacgggtcttctctctacatgcccaaactatctaagcttattttctatcaacttttctactataagtgctacccccactctct 20192025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 35690326 - 35690226
Alignment:
Q  56 ttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    ||||||||||||||||||||||| | |||||||  || | |||||||| ||||||||||  |||||||||||| ||||||||| ||||||||| ||||||    
T  35690326 ttttctactataggtgctaccccaactctctctttaaaggtgtcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctcatct 35690227  T
Q  154 c 154  Q
    |    
T  35690226 c 35690226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 56225109 - 56224983
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtct---agtcttaccactc 131  Q
    ||||| ||||||||||||| ||||| ||||||||||  || ||| | | ||||| ||| |||||||| ||||| ||||||||||    ||||||||||||    
T  56225109 ctaagcctattttctaccatcttttatactataggtattatcccaactttctcttatggtgtcattcctaatcatatcatgtcttagtgtcttaccactc 56225010  T
Q  132 atccagcgcaacatcatcatctctgct 158  Q
    ||||| | |||||||||||||||||||    
T  56225009 atccaccacaacatcatcatctctgct 56224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 10775665 - 10775786
Alignment:
Q  39 gtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatcca 136  Q
    ||||| ||||||||| ||||||||||||||||| ||||||  || ||||||||||| |||||||  |||| || || ||||| ||| | |||| ||||||    
T  10775665 gtctagtttctaccatcttttctactataggtgttaccccaacactctctctaatgttgtcatttctaattctttcctgtctggtcctgccacgcatcca 10775764  T
Q  137 gcgcaacatcatcatctctgct 158  Q
     | |||||||||||||||||||    
T  10775765 acacaacatcatcatctctgct 10775786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 51252674 - 51252791
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcc 108  Q
    |||||||||||||||| | | | || ||||| ||| |||| |||| ||||||||||| |||||||||||| | |||||||||||  ||||||  ||||||    
T  51252674 gtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctaccccaactctctctaatgtagtcatttctaatcc 51252773  T
Q  109 tatcatgtctagtcttac 126  Q
    ||||  ||||||||||||    
T  51252774 tatctcgtctagtcttac 51252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 54470276 - 54470128
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaat 106  Q
    |||||||||||||||| | ||| ||  |||||||| |||| |||| ||||||||||||||||||||||||  |  ||||||||||| ||| |||   |||    
T  54470276 gtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctaccccaactctctctctaatgttgttatttcaaat 54470177  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatcatcatctct 155  Q
    | ||||   |||||||||||||| ||||||  |||||||| ||||||||    
T  54470176 catatcccatctagtcttaccacacatccaatgcaacatcctcatctct 54470128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 25257793 - 25257921
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    |||||||||||||||||   ||| || |||||||||  |||||||| ||||| || | |||||| |||| | | ||||||||||| |||||||  ||||     
T  25257793 ggtcttctctctacatgctcaaaccacctaagtctagcttctaccatcttttatattgtaggtgttacctcaactctctctaatgttgtcatttctaatt 25257892  T
Q  108 ctatcatgtctagtcttaccactcatcca 136  Q
    ||||||||||||||||||| || ||||||    
T  25257893 ctatcatgtctagtcttactacacatcca 25257921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 26037741 - 26037797
Alignment:
Q  32 catctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  26037741 catctaagcctattttctaccaacttttctactataggtgctaccctcactctctct 26037797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 41192913 - 41192764
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc----cattctctctaatgatgt 96  Q
    |||||| |||||||||||||||||   |||||| ||||||||| |||| |||| |||||||||| |||||||||||||    |  ||||||||| | |||    
T  41192913 atctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctaccccaactctctctctctaacgctgt 41192814  T
Q  97 cattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||||  ||||  |||| |||||| || |||||| |||||| |||||||||    
T  41192813 catttataattgtatcctgtctaatcataccacacatccaacgcaacatc 41192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 43070029 - 43070128
Alignment:
Q  57 tttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctg 156  Q
    ||||||||||||| |||||| | |  |||||||||| |||||||  |||||||||| |||||| ||||||||| |||||| | |||||| ||||||||||    
T  43070029 tttctactataggcgctacctcaa--ctctctaatgttgtcatttctaatcctatcctgtctaatcttaccacacatccaacccaacatgatcatctctg 43070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 49987471 - 49987346
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaatcctatcatgtctagtcttaccactca 132  Q
    ||||| |||||||| |||| |||||||||||||||||  ||||  | |||||  |||||| |||||||  |||||||||||||||||||||||| |  ||    
T  49987471 ctaagcctattttccaccatcttttctactataggtgtgacccagactctctatctaatgttgtcatttctaatcctatcatgtctagtcttactaaaca 49987372  T
Q  133 tccagcgcaacatcatcatctctgct 158  Q
    | || | ||||||| |||||||||||    
T  49987371 ttcaacacaacatcctcatctctgct 49987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8286508 - 8286455
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaa 54  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  8286508 atctacgggtcttctctctacatgcctaaaccatctaagcctattttctaccaa 8286455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 10209104 - 10208978
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    ||||||||| ||||||| | ||| || |||||| || ||||| ||| |||||||||||||||| ||||||| |  |||||||||| |||||||  ||||     
T  10209104 ggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggttctaccccaa--ctctctaatgttgtcatttctaatt 10209007  T
Q  108 ctatcatgtctagtcttaccactcatcca 136  Q
    |||||   |||||||||||||| ||||||    
T  10209006 ctatcccatctagtcttaccacacatcca 10208978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 17900550 - 17900398
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattc--tctctaatgatgtcattcttaa 105  Q
    |||||||||||||| || | ||| ||  | |||||| ||||||||  |||||||||||||||||||||||| | ||  |||||||||  ||||||  |||    
T  17900550 ggtcttctctctacgtgcccaaaccacatgagtctagtttctaccgtcttttctactataggtgctaccccaactccgtctctaatgtcgtcatttctaa 17900451  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |  ||||   |||||||||||||| |||||| ||||||||| |||| ||||||    
T  17900450 ttttatcccatctagtcttaccacacatccaacgcaacatcctcatttctgct 17900398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 35555859 - 35555928
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    ||||||||||||| ||| | ||| || ||||||||| ||||||||| |||||||||||||||||||||||    
T  35555859 ggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccc 35555928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 7092465 - 7092583
Alignment:
Q  41 ctattttctaccaacttttctactataggtgctacccccattc--tctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagc 138  Q
    |||||||||| ||  |||||||||||||||||||  || | ||  |||||||| ||||||||| ||||| ||||   ||||| |||||||||||||||||    
T  7092465 ctattttctatcatattttctactataggtgctattccaactctgtctctaatcatgtcattc-taatcatatcccttctagacttaccactcatccagc 7092563  T
Q  139 gcaacatcatcatctctgct 158  Q
     ||||||| |||||||||||    
T  7092564 acaacatcctcatctctgct 7092583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44047553 - 44047640
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||| ||||||  ||||||||||| ||| || ||||| |||  |||||||| |||||||||||||||||||||||| | |||||||    
T  44047553 atctacaggtcttaactctacatgtccaaaccacctaagcctagattctaccaccttttctactataggtgctaccccaactctctct 44047640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 20105761 - 20105831
Alignment:
Q  84 tctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||| |||||||  ||||| ||||  ||||||||||||||| |||||| |||||||||||||||||    
T  20105761 tctctaatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctc 20105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 45423681 - 45423542
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctat 111  Q
    |||| |||||||||| ||| ||  |||||| | ||||||||| |||||||| ||||||||||||| | |  |||| ||||| |||||||  |||| ||||    
T  45423681 ttctttctacatgtcaaaaccacgtaagtcaagtttctaccatcttttctattataggtgctacctcaa--ctctataatgttgtcatttctaattctat 45423584  T
Q  112 catgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    |  ||||||||||||||| || ||| | ||||||| ||||||    
T  45423583 cccgtctagtcttaccacacaaccaacacaacatcctcatct 45423542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 32479114 - 32479057
Alignment:
Q  2 tctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaactttt 59  Q
    ||||| ||||| ||||||||||||| ||| |||||||| |||||||||||||||||||    
T  32479114 tctacaggtctcctctctacatgtccaaaccatctaagcctattttctaccaactttt 32479057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 25967555 - 25967619
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    |||||||||||  ||||||  |||||||| |||||||||||||||||| |||||| |||||||||    
T  25967555 tctctctaatgtagtcatttctaatcctaccatgtctagtcttaccacacatccatcgcaacatc 25967619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 43435200 - 43435132
Alignment:
Q  163 ctccctttttaaactcgtcgaaatcgtcaaatgtgtctcttcatctaaatagaaccctttatccatcat 231  Q
    ||||||||| |||| ||| |||||||||||||  ||||||||||||||||| |||||||| ||| ||||    
T  43435200 ctcccttttcaaacccgtagaaatcgtcaaatacgtctcttcatctaaataaaaccctttttccttcat 43435132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 2589056 - 2588991
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||||||||||| ||||| || ||||||||| ||||||||| |||||| ||||||||| |||||||    
T  2589056 ttctctctacatgcctaaaccacctaagtctagtttctaccatcttttc-actataggtactacccc 2588991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 26356688 - 26356626
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtg 71  Q
    ||||||||||||  || | ||| || ||||||||||||||||||| |||||||||||||||||    
T  26356688 gtcttctctctaagtgcccaaaccacctaagtctattttctaccatcttttctactataggtg 26356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 39708502 - 39708424
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctc 87  Q
    ||||||||| ||||||   ||| |||||||| ||||||||||||||||||| ||||| ||| ||||||| || ||||||    
T  39708502 gtcttctctatacatgctcaaaccatctaagcctattttctaccaacttttatactacaggagctaccctcactctctc 39708424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 31403276 - 31403384
Alignment:
Q  56 ttttctactataggtgctacccccattct------ctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatc 149  Q
    ||||||||||||||||||||||| | |||      |||||||| |||||||  ||||||||||  ||||| ||| ||||| ||| || | ||||||||||    
T  31403276 ttttctactataggtgctaccccaactctatctgtctctaatgttgtcatttctaatcctatcccgtctaatctcaccacacattcaactcaacatcatc 31403375  T
Q  150 atctctgct 158  Q
    |||||||||    
T  31403376 atctctgct 31403384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 34233291 - 34233393
Alignment:
Q  56 ttttctactataggtgctacccccattc----tctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    ||||||||||||||||||| ||| | ||    ||||||||| |||| ||  |||||||||||  |||||||||| ||| |||||| | ||||||||||||    
T  34233291 ttttctactataggtgctatcccaactctctatctctaatgttgtcgtttctaatcctatcacatctagtcttatcacacatccaacacaacatcatcat 34233390  T
Q  152 ctc 154  Q
    |||    
T  34233391 ctc 34233393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 50471596 - 50471479
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    ||||||||||||||||| | ||| ||  |||  ||| |||| |||| ||||||||||||  |||||||||| | ||||||||||| ||||||   |||||    
T  50471596 ggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctactattagtgctaccccgagtctctctaatgttgtcatctctaatc 50471497  T
Q  108 ctatcatgtctagtctta 125  Q
    |||| | ||| |||||||    
T  50471496 ctattacgtcaagtctta 50471479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 30621418 - 30621486
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||||||||| || | |||||| ||||  |||||||| |||| ||||||||||||| ||||||||||    
T  30621418 tcttctctctacgtgcccaaatcacctaaacctattttccaccatcttttctactataagtgctacccc 30621486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 42285912 - 42285972
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactatag 68  Q
    |||||||||| |||||| | ||| || ||||||||| ||||||||| ||||||||||||||    
T  42285912 ggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 42639233 - 42639301
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    |||||||||||||||||| ||| || ||||| ||  |||| |||| |||||||||||||||||| ||||    
T  42639233 gtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgcaaccc 42639301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 44360155 - 44360077
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||||| | |||  | |||| |||| ||||||||| ||||||||||||||||| |||||| | |||||||    
T  44360155 gtcttctctctacatgcccaaacaacctaa-tctagtttctaccatcttttctactataggtgataccccaactctctct 44360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 50662457 - 50662330
Alignment:
Q  9 gtcttctctctacatgtctaaatc-atctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    |||||||||||||||| | ||| | | ||||| ||| |||| |||| ||||||||||||||||| | |||  | ||||||||||| |||||||   ||||    
T  50662457 gtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtgttgcccaaactctctctaatgctgtcatttccaatc 50662358  T
Q  108 ctatcatgtctagtcttaccactcatcc 135  Q
    |||||   | |||||||||||| |||||    
T  50662357 ctatctcatatagtcttaccacacatcc 50662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 55768717 - 55768783
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||| |||||||||||| || ||||  |||||||| |  | ||||||||||||||||||||||||    
T  55768717 ttctctttacatgtctaaaccacctaaacctattttccatgatcttttctactataggtgctacccc 55768783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 55832973 - 55833039
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||| |||||||||||| || ||||  |||||||| |  | ||||||||||||||||||||||||    
T  55832973 ttctctttacatgtctaaaccacctaaacctattttccatgatcttttctactataggtgctacccc 55833039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 2588970 - 2588905
Alignment:
Q  87 ctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatc 152  Q
    |||||| |||||||  ||||||||||   |||||||||||||| |||||| ||||||||| |||||    
T  2588970 ctaatgttgtcatttctaatcctatcccttctagtcttaccacacatccaacgcaacatcctcatc 2588905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 36557268 - 36557321
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||| ||||||||| |||||||||||| |||||| |||| | |||||||    
T  36557268 ctaagtctagtttctaccatcttttctactatgggtgctgccccaactctctct 36557321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 46372093 - 46372024
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||||||||||||||   ||| || ||||||||| ||||||| |  ||||| |||||||||||||||||    
T  46372093 gtcttctctctacatgcacaaaccacctaagtctagtttctacaatattttcgactataggtgctacccc 46372024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49738809 - 49738886
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||| ||||||||||| |||| |   |||||| ||||| | | ||||||||| ||||||||| ||||||||||||||    
T  49738809 atctatgggtcttctctttacacgctcaaatcacctaagccgagtttctaccatcttttctacaataggtgctacccc 49738886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 45367830 - 45367984
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccc-attctctctaatgatgtcat 99  Q
    |||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  45367830 atctacgggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactataggtgctaccccccactctctctaatggtgtcat 45367929  T
Q  100 tcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  45367930 tcttaatcctatcttgtctagtcttaccattcatccagcgcaacatcatcatctc 45367984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 3866149 - 3865990
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    ||||||||||||||||||||||||   ||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||  |||| |||||    
T  3866149 atctacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttactataggtgctacccccactctctctccaatggtgtca 3866050  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3866049 ttcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcatcatctctgct 3865990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 11992313 - 11992466
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||| ||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  11992313 atctacgggtcttctctctatatgtccaaaccatctaagcttattttctaccaacttttctactataggtgctaccctcactctctctaatggtgtcatt 11992412  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    | ||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  11992413 cctaatcttatcatgtctagtattaccactcatccagcgcaacatcctcatctc 11992466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 12734776 - 12734623
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    ||||||||||||||||| |||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||    
T  12734776 atctacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctacccccactctctctaatggtgtcatt 12734677  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
      ||||||||||  |||||||||||||||||||||||| ||||||| |||||||    
T  12734676 tctaatcctatcccgtctagtcttaccactcatccagcacaacatcctcatctc 12734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 38429958 - 38429806
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattc 101  Q
    |||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||   ||||||||||| ||||||||    
T  38429958 tacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctgcccccactctctctctaatggtgtcattc 38429859  T
Q  102 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
     |||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  38429858 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctc 38429806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41197433 - 41197588
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattc--tctctaatgatgtca 98  Q
    |||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||| |||||||||||||| || ||  ||||||||| |||||    
T  41197433 atctacggatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctaccctcactctatctctaatggtgtca 41197532  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  41197533 ttcctaatcctatcatgtctagtcttaccactcatctagcgcaacatcctcatctc 41197588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 8180850 - 8180698
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaa 105  Q
    ||||||||||||||||| | ||| ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||| |||    
T  8180850 ggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaa 8180751  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  8180750 tcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgct 8180698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 36183528 - 36183369
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| || |||||  ||||||||||||||||||||||||||||||||||||| | |||||||  |||  |||||    
T  36183528 atctacgggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctacccctactctctctctaattgtgtca 36183429  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  36183428 ttcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 36183369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 3243858 - 3244015
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||  | ||| |||||||| |||||||| | |||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  3243858 atctacgggtcttctctctacattcccaaaccatctaagcctattttccatcaacttttttactataggtgctacccccactctctctaatggtgtcatt 3243957  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||||||||| ||||||||| ||||||||| ||||||||| | |||||||||    
T  3243958 cataatcctatcatgtgtagtcttactactcatccaacgcaacatccttatctctgct 3244015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 38452890 - 38453053
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca------ttctctctaatgat 94  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||| |||||||||||       ||||||||||| |    
T  38452890 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctacccccactctctctctctctaatggt 38452989  T
Q  95 gtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||| ||||||    
T  38452990 gtcattcctaatcctatgatgtctagtcttaccactcatccaacgcaacatcctcatgtctgct 38453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18424582 - 18424716
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    ||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||| |||| ||||||||||| | |||||    
T  18424582 atctacgggtcgtctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagatgctacacccactctctctaatggtatcatt 18424681  T
Q  101 cttaatcctatcatgtctagtcttaccactcatcc 135  Q
    ||||||| |||||| ||||||||||||||||||||    
T  18424682 cttaatcatatcatatctagtcttaccactcatcc 18424716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41763247 - 41763401
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat-tctctctaatgatgtcat 99  Q
    |||||| |||||||||||| |||||| ||| || ||||| ||||||||||||||||||||||||||||||| ||||||  | ||||||||||| ||||||    
T  41763247 atctacaggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtgttaccccactctctctctaatggtgtcat 41763346  T
Q  100 tcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    || |||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  41763347 tcctaatcctatcttgtctagtcttaccactcatccatcgcaacatcctcatctc 41763401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 23997691 - 23997539
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattct--ctctaatgatgtca 98  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||||||||||||| |||||||   |||||||||| |||| |||  |||||||| |||||    
T  23997691 atctacgggtcttctttctacatgtcaaaaccatctaaggctattttctaccaaattttcta---taggtgctacacccactctatctctaatggtgtca 23997595  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  23997594 ttcctaatccgatcatgtctagtcttaccactcatccagcgcaacatcttcatctc 23997539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4807672 - 4807510
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct------aatgat 94  Q
    ||||||| |||||||||||| ||| | |||  ||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||      ||||||    
T  4807672 atctacgagtcttctctctatatgccgaaactatctaagcctattt-ctaccaacttttctactataggtgctacccccactctctctctctctaatgat 4807574  T
Q  95 gtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||| ||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||    
T  4807573 gtcattcataatcctatcatgtctattcttaccattcatccaacgcaacatcctcatctctgct 4807510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 16097192 - 16097350
Alignment:
Q  2 tctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccc------attctctctaatgatg 95  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||      | ||||||||| | ||    
T  16097192 tctacaggtcttctctctacatgtccaaatcatctaagcctattttctaccaacttttctattataggtgctacccccactctaactctctctaacggtg 16097291  T
Q  96 tcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    |||||  ||||| ||||   |||||||||||||||||||||| |||||||| |||||||    
T  16097292 tcatttctaatcatatcccatctagtcttaccactcatccagtgcaacatcctcatctc 16097350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 25834751 - 25834671
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  25834751 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctct 25834671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2610665 - 2610578
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||| |||||||||||||||| | ||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2610665 atctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctacccccactctctct 2610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 43752159 - 43752239
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||| | |||||||    
T  43752159 ggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctaccccaactctctct 43752239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 4598775 - 4598928
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc----cattctctctaatgatgtcattctta 104  Q
    ||||||| |||| ||||| ||| || | ||||||| ||||||||| |||| |||||||||||||||||||    |  |||||||||||  |||||| | |    
T  4598775 gtcttctttctatatgtccaaaccaccaaagtctagtttctaccatctttactactataggtgctaccccaactctctctctctaatgtcgtcattttga 4598874  T
Q  105 atcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    || |||||  ||||||||||||||| |||||| |||||||||||||| ||||||    
T  4598875 attctatcccgtctagtcttaccacacatccaacgcaacatcatcatttctgct 4598928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 43238305 - 43238377
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca 80  Q
    |||||||||| |||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 43238377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 9578915 - 9579053
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    ||||||||||||||||||| ||| || |||||||||||||  | || |||| |||||||| |||  ||||| | |||||||||   ||||||| |||||     
T  9578915 ggtcttctctctacatgtccaaaccacctaagtctattttacatcatctttactactatatgtgtcaccccaactctctctaacattgtcatttttaatt 9579014  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||||||| |||| ||||||||| |||||| |||||||||    
T  9579015 ctatcatatctattcttaccacacatccaacgcaacatc 9579053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24583837 - 24583907
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtg 71  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||| ||||||||    
T  24583837 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtg 24583907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 23714474 - 23714622
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcc 108  Q
    |||||||||||||||| |||||  |  |||||||| |||| |||| ||||||||||||| |||||| ||| | ||| |||||||  |||||| |||||||    
T  23714474 gtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgcta-cccaactctatctaatgtcgtcatttttaatcc 23714572  T
Q  109 tatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||  |||||||||||||||| |||||| | ||||||  | |||||||||    
T  23714573 tattttgtctagtcttaccacacatccaacacaacattctaatctctgct 23714622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 24102146 - 24102294
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcc 108  Q
    |||||||||||||||| |||||  |  |||||||| |||| |||| ||||||||||||| |||||| ||| | ||| |||||||  |||||| |||||||    
T  24102146 gtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgcta-cccaactctatctaatgtcgtcatttttaatcc 24102244  T
Q  109 tatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||  |||||||||||||||| |||||| | ||||||  | |||||||||    
T  24102245 tattttgtctagtcttaccacacatccaacacaacattctaatctctgct 24102294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 2610522 - 2610446
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||| |||||||| ||||||| || ||||||||||||||||||||||| |||| |||| |||||||||||    
T  2610522 tctctctaatggtgtcattcctaatcctgtcctgtctagtcttaccactcatccaacgcagcatcctcatctctgct 2610446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 42092584 - 42092437
Alignment:
Q  11 cttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatccta 110  Q
    |||||||||||||| | | |||| ||||   || ||||||||| |||||||| |||||| |||||||| | |||||||||   |||||||  ||||| ||    
T  42092584 cttctctctacatgcccagatcacctaatcttagtttctaccatcttttctagtataggcgctaccccaactctctctaacattgtcatttctaatcata 42092485  T
Q  111 tcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||  |||||||||||| || ||||||  ||||||||||||||||||||    
T  42092484 tcccgtctagtcttactacacatccaatgcaacatcatcatctctgct 42092437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 6237961 - 6238106
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactat--aggtgctacccccattctctctaat-gatgtcatt 100  Q
    ||||||||| ||||||||||||| ||| ||||||||  | |||||||||||||| |||  | |  ||||||||   ||| ||||||  || | |||||||    
T  6237961 tacgggtctactctctacatgtccaaaccatctaagcatgttttctaccaacttatcttttttttaggtgctatgtccactctctcccattggtgtcatt 6238060  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    | |||| |||||||||||||||||||| ||||||||||||||||||    
T  6238061 cctaattctatcatgtctagtcttaccgctcatccagcgcaacatc 6238106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 19337096 - 19337209
Alignment:
Q  42 tattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtct-agtcttaccactcatccagcgc 140  Q
    ||||||| |||| |||| ||||||||||||||||||| | ||||||||||| | |||||  |||||||||| || || ||||||||||| |||||| ||     
T  19337096 tattttccaccatctttactactataggtgctaccccaactctctctaatgttctcatttataatcctatcctgcctaagtcttaccacacatccaacgt 19337195  T
Q  141 aacatcatcatctc 154  Q
    |||||| |||||||    
T  19337196 aacatcctcatctc 19337209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 9556582 - 9556720
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattcttaat 106  Q
    |||||||||||||||| ||||| || ||||| |||||||| ||||  |||||||||||| ||| |||||| |  |||||||||||| |||||||  ||||    
T  9556582 gtcttctctctacatgcctaaaccacctaagcctattttccaccat-ttttctactataagtgttaccccaactttctctctaatgttgtcatttctaat 9556680  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    | ||||  ||||| ||||||||| |||||| | |||||||    
T  9556681 catatcccgtctaatcttaccacacatccaacacaacatc 9556720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 24583906 - 24583970
Alignment:
Q  94 tgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||| |||||||| |||||||||||||||||| || ||||||| |||||||||||    
T  24583906 tgtcattcttaatcatatcatgtttagtcttaccactcatcccgcacaacatcttcatctctgct 24583970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 38434992 - 38434873
Alignment:
Q  37 aagtctattttctaccaacttttctactataggtgctacccccat--tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatc 134  Q
    ||||||| |||| |||| |||||||||||||||||||||||| ||  ||||||||||| |||||||  ||||| | ||  ||||||| ||||||| ||||    
T  38434992 aagtctagtttccaccatcttttctactataggtgctaccccaattctctctctaatgttgtcatttctaatcttctctcgtctagttttaccacgcatc 38434893  T
Q  135 cagcgcaacatcatcatctc 154  Q
    ||  |||||||| |||||||    
T  38434892 caatgcaacatcctcatctc 38434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 9647814 - 9647969
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||| |||||||| | |||||||| ||| || ||||  ||| |||| |||| | |||||||||||||| || |||| |  |||| ||||| || ||||    
T  9647814 atctacaggtcttctttttacatgtccaaaccacctaaagctagtttccaccatcatttctactataggtactgccccaa--ctctataatgttgacatt 9647911  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
      ||||| |||||  |||||||||||||| |||||| ||||||||| |||||||||||    
T  9647912 tctaatcttatcacatctagtcttaccacacatccaacgcaacatcctcatctctgct 9647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 451931 - 451986
Alignment:
Q  103 taatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||||||||||||||||| | ||||||||  |||||||||||    
T  451931 taatcctatcatgtctagtcttaccactcatctaacgcaacatactcatctctgct 451986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 30743668 - 30743545
Alignment:
Q  32 catctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaatcctatcatgtctagtcttaccac 129  Q
    ||||||| |||| |||||||||| |||||||| ||| |||||||||| | |||||  |||| | || |||||  |||||||||  ||||||||||| |||    
T  30743668 catctaattctaatttctaccaatttttctaccataagtgctacccc-actctcttcctaacggtgacattcccaatcctatcccgtctagtcttagcac 30743570  T
Q  130 tcatccagcgcaacatcatcatctc 154  Q
    |||||  |||||||||| |||||||    
T  30743569 tcatcatgcgcaacatcctcatctc 30743545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 451853 - 451909
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaactt 57  Q
    ||||||||||||| |||||||||| | ||| |||||||| |||||||||||||||||    
T  451853 atctacgggtcttttctctacatgcccaaaccatctaagcctattttctaccaactt 451909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 227359 - 227312
Alignment:
Q  41 ctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  227359 ctattttctacaaacttttctaccataggtgctacccccactctctct 227312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 44437934 - 44438005
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca 80  Q
    |||||||||||||||| | ||| || ||| ||||| ||||||||| ||||||||||||||| | ||||||||    
T  44437934 gtcttctctctacatgccgaaaccacctatgtctagtttctaccatcttttctactataggggttaccccca 44438005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12141621 - 12141544
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||| |||||||| ||||| || | ||| || ||||| || ||||| |||| ||||||||||||||||||||||||    
T  12141621 atctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctacccc 12141544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 7825352 - 7825276
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||  |||||||  ||||| ||||  ||||||||||||||| |||||| ||||||||| | |||||||||    
T  7825352 tctctctaatagtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgct 7825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 7615358 - 7615251
Alignment:
Q  17 tctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgt 116  Q
    ||||||||||||||  | ||||  ||| |||  |||| ||||||||||||||||| |||||| | |||||||||||  ||||||  || |||||||  ||    
T  7615358 tctacatgtctaaacaacctaaccctagtttgcaccatcttttctactataggtgttaccccaagtctctctaatgtggtcatttctagtcctatcccgt 7615259  T
Q  117 ctagtctt 124  Q
    ||||||||    
T  7615258 ctagtctt 7615251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 18958950 - 18958907
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  18958950 ctaagcctattttccaccatcttttctactataggtgctacccc 18958907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 3481211 - 3481134
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||||||||| ||| || ||||| || ||||| |||| |||   |||||||||||||||||| |||| ||||    
T  3481211 ggtcttctctctacatgtccaaaccacctaagcctgttttccaccatctt---tactataggtgctaccccaattccctct 3481134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 38860243 - 38860165
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct 86  Q
    |||||||| |||| ||| ||||| || ||||| |||||||| || | |||||||||||| |||||| |||||| |||||    
T  38860243 ggtcttctttctaaatgcctaaaccacctaagcctattttccacaatcttttctactatgggtgctgcccccactctct 38860165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 6219031 - 6218954
Alignment:
Q  14 ctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaat 91  Q
    ||||||||||||| ||| || ||||| ||||| || || | ||||||||||||| |||||||||| | ||| ||||||    
T  6219031 ctctctacatgtccaaaccacctaagcctattatccactatcttttctactataagtgctaccccaactctatctaat 6218954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 11412764 - 11412711
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||| |||||||| ||||  ||||||||||||||||||||||| | |||||||    
T  11412764 ctaagcctattttccaccatattttctactataggtgctaccccaactctctct 11412711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 786873 - 786833
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctac 75  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  786873 ctaagtctagtttctgccatcttttctactataggtgctac 786833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 41858800 - 41858744
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctacta 65  Q
    |||||||||||||||||| ||| |||||||| | | |||| |||| |||||||||||    
T  41858800 gtcttctctctacatgtccaaaccatctaagcccagtttccaccatcttttctacta 41858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 8671995 - 8671838
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||| ||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  8671995 atctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatt 8671896  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  8671895 cctaatcctatcatgtctagtcttaccactcatccaacgcaacatccttatctctgct 8671838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 696346 - 696191
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  696346 atctacgggtcttctctctacatgtccaagccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 696247  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  696246 ttcctaatcctatcctgtctagtcttaccactcatccagcgcaacatcctcatctc 696191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 1210822 - 1210663
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  1210822 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 1210723  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  1210722 ttcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 1210663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 30202335 - 30202494
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||   ||||||||||| |||||    
T  30202335 atctacgggtcttctctctacatgaccaaaccatctaagcctattttctaccaacctttctactataggtgctacccccactctctctctaatggtgtca 30202434  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  30202435 ttcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 30202494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 34792554 - 34792713
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||   ||||||||||| | |||    
T  34792554 atctacgggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctacccccactctctctctaatggtttca 34792653  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34792654 ttcctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgct 34792713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 9592811 - 9592652
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    |||||||||||||||||||||||| | ||  |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||  |||| |||||    
T  9592811 atctacgggtcttctctctacatgcccaacccatctaagcctattttctacaaacttttctactataggtgctacccccactctctctctaatggtgtca 9592712  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  9592711 ttcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 9592652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 15086011 - 15085856
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  15086011 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 15085912  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||| | |||||||||||||||| |||||||||||||| |||||||    
T  15085911 ttcctaatcctatcctatctagtcttaccactcgtccagcgcaacatcctcatctc 15085856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 51602133 - 51601983
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  51602133 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccctcactctctctaatggtgtcatt 51602034  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
    | ||||| |||||||||||||||||||||||||| | ||||||||| ||||    
T  51602033 cctaatcatatcatgtctagtcttaccactcatctaacgcaacatcctcat 51601983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 32082950 - 32083105
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||| |||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  32082950 atctacgggtctcctctctgcatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 32083049  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  32083050 ttcctaatcctaccctgtctagtcttaccactcatccagcgcaacatcctcatctc 32083105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4001660 - 4001814
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  4001660 atctacgggtctcctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 4001759  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    ||| |||||||||  ||||||||||||||||||||| ||||||||||| ||||||    
T  4001760 ttcctaatcctattttgtctagtcttaccactcatctagcgcaacatcctcatct 4001814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 51440970 - 51441129
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||| ||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||| ||||||||   ||||||||||| |||||    
T  51440970 atctccgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtca 51441069  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  51441070 ttcctaatcctatcatgtctagtcttaccactcgtccaatgcaacatcctcatctctgct 51441129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 32231167 - 32231315
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattcttaat 106  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||| |||||||||||||||||||||||||   ||||||||||| |||||||| ||||    
T  32231167 gtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctacccccactctctctctaatggtgtcattcctaat 32231266  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatcatcatctct 155  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  32231267 cctatcatgtctaatcttaccactcatctagcgcaacatcctcatctct 32231315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 22090173 - 22090012
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca----ttctctctaatgatgt 96  Q
    |||||||||||||||| ||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||    
T  22090173 atctacgggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgt 22090074  T
Q  97 cattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||| |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||    
T  22090073 cattcataatcctatcctgtctagtcttaccactcatccaacacagcatcctcatctctgct 22090012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 49347598 - 49347757
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtca 98  Q
    ||||||||||||||||||| |||| | ||| |||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||  |||| |||||    
T  49347598 atctacgggtcttctctctgcatgaccaaaccatctaagcctattttctaccaacttttctactatagatgctacccctactctctctccaatggtgtca 49347697  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||    
T  49347698 ttcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctttgct 49347757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8391849 - 8391694
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||| ||||||||||||| |||  ||||||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  8391849 atctacgggtctcctctctacatgtccaaacaatctaaacctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 8391750  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||| ||| ||||||||||||||||||| | ||||||| |||||||    
T  8391749 ttcctaatcctatcttgtgtagtcttaccactcatccaacacaacatcttcatctc 8391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 43240584 - 43240745
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca----ttctctctaatgatgt 96  Q
    ||||||||||||||||||||||||   |||  ||||||| |||||||||| ||| |||||||||||||||||||||||||     |||||||||||  ||    
T  43240584 atctacgggtcttctctctacatgctcaaactatctaagcctattttctatcaatttttctactataggtgctacccccactctctctctctaatggcgt 43240683  T
Q  97 cattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  43240684 cattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 43240745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38807876 - 38807963
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||| ||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38807876 atctaagggtcttctctttacatgcctaaaccatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 38807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 9509388 - 9509236
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaa 105  Q
    ||||||||||||||||| | |||  | ||||| ||||||| ||||| |||||||||||||||||||||||| | |||||||  |||| |||||||  |||    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctaccccaactctctctctaatggtgtcatttctaa 9509289  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    || |||| |||||||||||| |||||||||| | ||||||| |||||||||||    
T  9509288 tcatatcctgtctagtcttatcactcatccaacacaacatcctcatctctgct 9509236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 37463112 - 37463231
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatc 134  Q
    ||||| |||||||||||   |||||||||||||||||||||||| | ||||||||||| |||||||| |||||||| | |||||||||||||||||||||    
T  37463112 ctaagcctattttctactgtcttttctactataggtgctaccccaactctctctaatggtgtcattcctaatcctaacctgtctagtcttaccactcatc 37463211  T
Q  135 cagcgcaacatcatcatctc 154  Q
    ||  | |||||| |||||||    
T  37463212 caatgaaacatcctcatctc 37463231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 9599633 - 9599758
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtcattcttaatcctatcatgtctagtcttaccactca 132  Q
    ||||| ||||||||||||| ||||||||||||||||| ||| || | ||||  |||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  9599633 ctaagcctattttctaccatcttttctactataggtgttactccaactctctctctaatgatgtcattcctaatcatatcccgtctagtcttaccactca 9599732  T
Q  133 tccagcgcaacatcatcatctctgct 158  Q
    |||| | ||||||| |||||||||||    
T  9599733 tccaacacaacatcctcatctctgct 9599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4029199 - 4029112
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||||||||||||||| ||| | |||||| ||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  4029199 atctacgggtcttctctctacatgtccaaaccttctaagcctattttctaccaacttgtctactctaggtgctacccccactctctct 4029112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 18469327 - 18469440
Alignment:
Q  41 ctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgc 140  Q
    |||||||||| || ||| ||||||||||||| |||||| | ||||||||||  |||||||| ||||| ||||||||||||||||||||||||| || |||    
T  18469327 ctattttctatcatcttctctactataggtgttaccccaactctctctaattgtgtcattcctaatcatatcatgtctagtcttaccactcatacaacgc 18469426  T
Q  141 aacatcatcatctc 154  Q
    | |||| |||||||    
T  18469427 agcatcgtcatctc 18469440  T

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Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 18793201 - 18793345
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaat 106  Q
    ||||||||||| |||| | |||||| ||||||||| ||||||||| ||||||||| ||| || |||||||  |  ||||| |||||  |||||| ||| |    
T  18793201 gtcttctctctgcatgccaaaatcaactaagtctagtttctaccatcttttctacaataagtcctaccccaaccctctctttaatgtcgtcatttttagt 18793300  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatcatcat 151  Q
     ||||| ||||||||||| |||| |||||| ||||||||||||||    
T  18793301 tctatcctgtctagtctttccacacatccaacgcaacatcatcat 18793345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 2544669 - 2544589
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||||||||| ||| || |||||||| ||||| |||| |||||||||||||||||||||||| | |||||||    
T  2544669 ggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctaccccaactctctct 2544589  T

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Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27848010 - 27848155
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtca 98  Q
    |||||| |||||||||||| |||| | ||| || |||||  |||||||||||| ||||||||| | |||||||||| |  |  ||||||||||| ||| |    
T  27848010 atctacaggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctaccacaactctctctctaatggtgtta 27848109  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    ||| | ||||||||  |||||||||||||||||||||| | ||||||    
T  27848110 ttcct-atcctatcccgtctagtcttaccactcatccaacacaacat 27848155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 43423788 - 43423647
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaat 106  Q
    |||||||||||||||| | ||| || ||||| ||| |||| |||| ||||||||||||||||| ||||||  |  |||||||||||  ||||||  ||||    
T  43423788 gtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgttaccccaactctctctctaatgtggtcatttctaat 43423689  T
Q  107 cctatcatgtctagtctt--accactcatccagcgcaacatc 146  Q
    |||||| |||||||||||   |||| |||||| |||||||||    
T  43423688 cctatcctgtctagtcttcccccacacatccaacgcaacatc 43423647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 14226047 - 14226169
Alignment:
Q  14 ctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatca 113  Q
    ||||||||||| | ||| || ||||| |||||||| |||| ||||||||  |||||||||||  | | |||||| |||| || ||||  |||||||||||    
T  14226047 ctctctacatgcccaaaccacctaagcctattttccaccatcttttctatgataggtgctactgcaactctctccaatgttgccatttctaatcctatca 14226146  T
Q  114 tgtctagtcttaccactcatcca 136  Q
    ||||||| |||||||| ||||||    
T  14226147 tgtctagccttaccacacatcca 14226169  T

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Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 52561850 - 52561950
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtcattcttaatcctatcatgtctagtcttaccactca 132  Q
    ||||| |||||||||| || | ||||||||| |||||||||||| | ||||  ||||||| |||||||| ||||| ||||  ||||||||||||||||||    
T  52561850 ctaagcctattttctatcatcatttctactaaaggtgctaccccaactctctctctaatggtgtcattcctaatcatatcccgtctagtcttaccactca 52561949  T
Q  133 t 133  Q
    |    
T  52561950 t 52561950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 1661500 - 1661420
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||||||   ||| ||||| || |||||||| |||| |||||||||||||||||||||||| | |||||||    
T  1661500 ggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctaccccaactctctct 1661420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25979436 - 25979495
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttc 60  Q
    |||||||||||||||||||||||||| ||| |||||||| ||| ||||||| ||||||||    
T  25979436 atctacgggtcttctctctacatgtccaaaccatctaagcctagtttctactaacttttc 25979495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 39140590 - 39140468
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctc--taatgatgtcattcttaa 105  Q
    ||||||||||||||||| | ||| || ||||| | ||||| | ||| ||||||||||||||||||||| || | ||||||  ||||| | |||||| |||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgctacgccaactctctctgtaatggtttcattcctaa 39140491  T
Q  106 tcctatcatgtctagtcttacca 128  Q
    |||||||   |||||||||||||    
T  39140490 tcctatctcatctagtcttacca 39140468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 26016507 - 26016355
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaa 105  Q
    |||||||| |||||||  | ||| || |||| |||| ||||||||| |||||||  |||||||| |||||| | |||||||  ||||   | |||  |||    
T  26016507 ggtcttctttctacatacccaaaccacctaaatctagtttctaccatcttttctcatataggtgttaccccaactctctctctaatgccattatttataa 26016408  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |  |||| |||||||||||||||| |||||| ||||||||| |||||||||||    
T  26016407 ttatatcctgtctagtcttaccacacatccaacgcaacatcctcatctctgct 26016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 48431619 - 48431688
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||||||||||||| | ||| || ||||| |||||||| |||| ||||||||||||||| ||||||||    
T  48431619 gtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctacccc 48431688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 13827929 - 13828017
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgt 96  Q
    ||||||||||||||||||  ||| || ||||  ||| |||| |||| ||||||||||||||||||| |||| | |||||||||| ||||    
T  13827929 ggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgctgccccaaatctctctaataatgt 13828017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32404731 - 32404807
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    |||||| |||||||||||||||| || ||| || ||||| |||||||| |||| ||||| ||||||||||| |||||    
T  32404731 atctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtgttaccc 32404807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 36340015 - 36340095
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||| |||||||||| || ||||  |||||||| |||| |||||||| |||||||||||| || | |||||||    
T  36340015 ggtcttctctctccatgtctaaaccacctaaacctattttccaccatcttttctaatataggtgctacaccaactctctct 36340095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40416448 - 40416361
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||| | ||||||||||||||| ||||| || ||||| ||  |||| |||| ||||||||||||||||||||| || | |||||||    
T  40416448 atctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctactccaactctctct 40416361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 4379999 - 4379927
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||||| |||||||  ||||| |||| | |||||||||||||| |||||| | ||||||| |||||||    
T  4379999 tctctctaatgttgtcatttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctc 4379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 40419708 - 40419557
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaat 106  Q
    |||||||||||||||| | ||| ||  |||||||| || |||||| || |||||||||| || |||||||  |  ||||||||||| |||||||  ||||    
T  40419708 gtcttctctctacatgcccaaaccacttaagtctagttactaccatctattctactataagttctaccccaactctctctctaatgttgtcatttctaat 40419609  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     |||||   |||||| ||||||  ||| || |||| |||| |||||||||||    
T  40419608 tctatctcatctagttttaccatacattcaacgcaccatcctcatctctgct 40419557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 46226586 - 46226642
Alignment:
Q  98 attcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||| ||| |||| | ||||||||| |||||||||||| |||||||||||||||||    
T  46226586 attctcaattctattacgtctagtctcaccactcatccaacgcaacatcatcatctc 46226642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 27637846 - 27637913
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacc 76  Q
    ||||| |||||||||| | ||| || ||||||||| |||||| || ||||||| ||||||||||||||    
T  27637846 gtcttttctctacatgcccaaaacacctaagtctagtttctatcatcttttctgctataggtgctacc 27637913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 35828762 - 35828829
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctac 75  Q
    ||||||||||||||| ||| ||| || ||||  |||||||| |||| ||||||||| |||||||||||    
T  35828762 ggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccataggtgctac 35828829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 854052 - 854119
Alignment:
Q  57 tttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttac 126  Q
    ||||||| ||||| |||||||| |  ||||| ||| |||||||| ||||| |||||||||||||||||||    
T  854052 tttctacgataggagctaccccaa--ctctcaaataatgtcatttttaattctatcatgtctagtcttac 854119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 37263397 - 37263331
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||||||||||| | ||| ||   ||||||| ||||||| | ||||||||||||||||||||||||    
T  37263397 ttctctctacatgcccaaaccactgaagtctagtttctactatcttttctactataggtgctacccc 37263331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 52073675 - 52073745
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtcta-ttttctaccaacttttctactataggtgctacccc 78  Q
    |||||||||||||||||| ||| || ||||| | | |||| ||||| ||||||||| ||||||||||||||    
T  52073675 gtcttctctctacatgtccaaaccacctaagccgagttttttaccatcttttctacaataggtgctacccc 52073745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 10272329 - 10272260
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    ||||||||||||||||| | ||| ||  | |||||| ||||||||| ||||||||||| |||||| ||||    
T  10272329 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 10272260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 16142165 - 16142226
Alignment:
Q  75 cccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatcca 136  Q
    |||| ||||||||||||| || ||||| | ||||||||  ||||||||||||||| ||||||    
T  16142165 ccccaattctctctaatggtggcattcctgatcctatcccgtctagtcttaccacacatcca 16142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 4380081 - 4380013
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||||||||||||| |||| || ||||   || |||| |||| |||||||||||||| |||||||||    
T  4380081 tcttctctctacatgtataaaccacctaaccttagtttccaccatcttttctactatagttgctacccc 4380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 17275177 - 17275137
Alignment:
Q  105 atcctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    |||||||||||| |||||||||||| |||||| ||||||||    
T  17275177 atcctatcatgtgtagtcttaccacacatccaacgcaacat 17275137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 51812591 - 51812515
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||| | ||||||  |||| ||| |||| |||| |||||||||||||| || |||||| | |||||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatagttgttaccccaactctctct 51812515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 52442792 - 52442868
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||| |||| | |||||  ||||| |||| |||||||||||||||| |||||| | ||||||| |||| ||||||    
T  52442792 tctctccaatgttctcatttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgct 52442868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 28085450 - 28085294
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattc 101  Q
    ||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  28085450 tacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattc 28085351  T
Q  102 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
     |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  28085350 gtaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 28085294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5258353 - 5258501
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca----ttctctctaatgatgt 96  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||     ||||||||| | |||    
T  5258353 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctaacggtgt 5258452  T
Q  97 cattcttaatcctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  5258453 cattcataatcctatcttgtctagtcttaccactcatccaacgcaacat 5258501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 608234 - 608081
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||| ||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  608234 atctacaggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttttctactataggtgataccctcactctctctaatggtgtcatt 608135  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    | |||||||||| | ||||||||||||||||||||| || |||||| |||||||    
T  608134 cctaatcctatcctatctagtcttaccactcatccaacggaacatcctcatctc 608081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 20427841 - 20427996
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    ||||||||||||||||| |||| ||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  20427841 atctacgggtcttctctatacacgttcaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 20427940  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||| ||||| ||| ||||||||||||||||||||||| |||||||    
T  20427941 ttcctaatcctatcctgtcttgtcctaccactcatccagcgcaacatcctcatctc 20427996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 21352049 - 21352183
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||| |||| |||||    
T  21352049 ggtcttctctctacatgtccaaatcatctaagcctattttctaccaatttttctactataggtgctacctccactctctctaacgatgttattcctaatc 21352148  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaa 142  Q
    ||||||| ||||||||||||||| ||| |||||||    
T  21352149 ctatcatatctagtcttaccacttatctagcgcaa 21352183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 32755998 - 32755837
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca----ttctctctaatgatgt 96  Q
    |||| ||||||||| ||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||    
T  32755998 atcttcgggtcttccctctacatgaccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgt 32755899  T
Q  97 cattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||| ||||  |||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  32755898 cattcctaatattatcatgtctagtcttaccactcatccaacacaacatcctcatctctgct 32755837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 10100064 - 10100217
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    ||||||| |||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||    
T  10100064 atctacgagtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttctactatatgtgcgacccccactctctctaatggtgtcatt 10100163  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
      ||||| |||  ||||||||||||||||||||| | ||||||||| |||||||    
T  10100164 tctaatcatatattgtctagtcttaccactcatctaacgcaacatcctcatctc 10100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 14030876 - 14030724
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattcttaat 106  Q
    ||||||||| |||||||| ||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||   ||||||||||| |||||||| ||||    
T  14030876 gtcttctctatacatgtccaaaccatttaagcctattatctaccaacttttctactataggtgctacccccactatctctctaatggtgtcattcctaat 14030777  T
Q  107 cctatcatgtctagtctt-accactcatccagcgcaacatcatcatctctgct 158  Q
    |||||| ||||||||||| |||||||||||| ||||||||| |||||||||||    
T  14030776 cctatcctgtctagtcttaaccactcatccatcgcaacatcctcatctctgct 14030724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30031333 - 30031178
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccatt--ctctctaatgatgtca 98  Q
    ||||| |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||| || ||    
T  30031333 atctatgggtcttctctctacatgtccaactcatctaagcctattttctaccaacttttctactataggtgctacccccactccctctctaatggtgaca 30031234  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||  ||||||||||  |||||||||||||||||||||| | ||||| | |||||||    
T  30031233 tttctaatcctatcccgtctagtcttaccactcatccaacacaacaacctcatctc 30031178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 35043646 - 35043801
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtca 98  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||| ||||||||||||||| ||||| |||||| || ||||  ||||||| |||||    
T  35043646 atctacgggtattctctctacatgtccaaacaatctaagcctattttcaaccaacttttctactttaggtactaccctcactctccctctaatggtgtca 35043745  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  35043746 ttcataatcctatcatgtctaatcttaccaatcatccagcgcaacatcttcatctc 35043801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 9706822 - 9706698
Alignment:
Q  32 catctaagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatcatgtctagtcttaccac 129  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| ||| |||||||  |||| |||||||| |||||||||||||||||||||||||||    
T  9706822 catctaagcctattttctaccaacttttctacaataggtgctacctccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 9706723  T
Q  130 tcatccagcgcaacatcatcatctc 154  Q
    |||||||| |||||||| |||||||    
T  9706722 tcatccagtgcaacatcctcatctc 9706698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5631899 - 5631741
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca------ttctctctaatgat 94  Q
    |||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||| ||||||||       ||||||||||| |    
T  5631899 atctacgggtcttctctctacatgtccaaaccatctaagcatattttctaccaacttttctactataggtgttacccccactctctctctctctaatggt 5631800  T
Q  95 gtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    ||||||| ||||| ||||  |||||||||||||||||||||| | ||||||| ||||||    
T  5631799 gtcattcctaatcatatccggtctagtcttaccactcatccaacacaacatcctcatct 5631741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 5080888 - 5080777
Alignment:
Q  45 tttctaccaacttttctactataggtgctacccccattc--tctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaa 142  Q
    ||||||||||||||||||||||||||| |||||||| ||  ||||||||| |||||||| ||||| ||| ||||||| |||||||| | |||||||||||    
T  5080888 tttctaccaacttttctactataggtgatacccccactcgttctctaatggtgtcattcctaatcttattatgtctaatcttaccagttatccagcgcaa 5080789  T
Q  143 catcatcatctc 154  Q
    |||| |||||||    
T  5080788 catcctcatctc 5080777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 9593919 - 9594072
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattc--------tctctaatgatgtcatt 100  Q
    |||||||||||||||| | ||| || ||||| ||||||||||||| |||||||||||  ||||||||||| | ||        ||||||||| |||||||    
T  9593919 gtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctaccccaactccctctctctctctaatggtgtcatt 9594018  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    | ||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  9594019 cctaatcctatcccgtctagtcttaccactcatccaacgcaacatcctcatctc 9594072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 6056032 - 6056122
Alignment:
Q  56 ttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    |||||||||||||||| |||||| | ||||||||||| ||||||||||||||  ||| | ||||||||||||||||||||| |||||||||    
T  6056032 ttttctactataggtgttaccccaactctctctaatggtgtcattcttaatcacatcctttctagtcttaccactcatccaacgcaacatc 6056122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30679483 - 30679417
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactata 67  Q
    |||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  30679483 atctacgggtctcctctctacatgcccaaatcatctaagcctattttctaccaacttttctactata 30679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28027032 - 28027189
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtca 98  Q
    |||||| ||| || |||||||||||| ||| || | ||| |||||||||||||  ||||||||||||||||||| ||||||||||  ||||| || ||||    
T  28027032 atctacaggtgttatctctacatgtccaaaccacc-aagcctattttctaccacattttctactataggtgcta-ccccattctctatctaacgacgtca 28027129  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||    ||||||||||||||||||||| |  |||||| || ||||||||    
T  28027130 ttcctaatcctatgccatctagtcttaccactcatccaacataacatcctcgtctctgct 28027189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 12890643 - 12890559
Alignment:
Q  19 tacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattc 101  Q
    |||||| | ||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||    
T  12890643 tacatgcccaaaccatgtaagcctattttctaccaacttttctactataggtgctacccccactctctccctaatggtgtcattc 12890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 33084128 - 33083976
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaa 105  Q
    ||||||||||||||||  | ||| || ||||||||| ||||||||| ||||||||| ||||||||||||||  |  ||||||||||   ||||||  |||    
T  33084128 ggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctaccccaactctctctctaatatcgtcatttctaa 33084029  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||   |||||||||||||| |||||| |||| |||| |||| ||||||    
T  33084028 ttctatcccatctagtcttaccacacatccaacgcagcatcctcatttctgct 33083976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 9568708 - 9568590
Alignment:
Q  32 catctaagtctattttctaccaacttttctactataggtgctacccccattct----ctctaatgatgtcattcttaatcctatcatgtctagtcttacc 127  Q
    |||||||||| |||||| | || ||||||||||||| |||||||| | |  ||    |||||||| |||||||  |||| ||||||||||||||||||||    
T  9568708 catctaagtccattttccatcatcttttctactataagtgctacctcaacactggcgctctaatgttgtcatttataattctatcatgtctagtcttacc 9568609  T
Q  128 actcatccagcgcaacatc 146  Q
    || |||||| |||||||||    
T  9568608 acacatccaacgcaacatc 9568590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24665887 - 24665818
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggt 70  Q
    |||||| ||||||||||||||||||| ||| || ||||| |||||||||||||  |||||||||||||||    
T  24665887 atctacaggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 33497032 - 33496963
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtcta-ttttctaccaacttttctactataggtgctacc 76  Q
    ||||||||||||||||||| ||| |||||||| ||| |||||||| ||||||||||| ||||||||||||    
T  33497032 ggtcttctctctacatgtccaaaccatctaagcctatttttctactaacttttctaccataggtgctacc 33496963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 33998292 - 33998368
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||  ||||||  |||||||||||  |||||||||||||| |||||| ||||||||| |||||||||||    
T  33998292 tctctctaatgtagtcatttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgct 33998368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 2689709 - 2689646
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgc 72  Q
    ||||||||||||||||   |||||||||||| ||||||||||| |||||||| |||||||||||    
T  2689709 gtcttctctctacatgctcaaatcatctaagcctattttctacaaacttttcaactataggtgc 2689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 21870322 - 21870403
Alignment:
Q  45 tttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttacca 128  Q
    ||||||||| ||||||||||| |||||||||||| |  |||||||||  || ||||  |||| ||||||||||||||| |||||    
T  21870322 tttctaccatcttttctactacaggtgctaccccaa--ctctctaatattgacatttctaattctatcatgtctagtcatacca 21870403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 2079408 - 2079341
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    ||||||||||||||  ||||| ||  |||| |||||||| |||| |||||||||||||| ||||||||    
T  2079408 tcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgctaccc 2079341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 5095910 - 5095816
Alignment:
Q  41 ctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcat 133  Q
    ||||||||||||| || |||||||||||||| || |||  || || ||||||||  ||||||| ||||||||||   || |||||||||||||||    
T  5095910 ctattttctaccatctattctactataggtgatatcccaacactccctctaatgtagtcattcctaatcctatcccttccagtcttaccactcat 5095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 8364635 - 8364523
Alignment:
Q  15 tctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcat 114  Q
    |||||||||| | ||| || ||||| |||||||| |||| |||||||||||||| |||||| || |  || ||||||  |||||||  ||||||||||      
T  8364635 tctctacatgcccaaaccacctaagcctattttcaaccaccttttctactatagttgctactccaa--ctgtctaatattgtcatttctaatcctatccc 8364538  T
Q  115 gtctagtcttaccac 129  Q
     ||||||||||||||    
T  8364537 atctagtcttaccac 8364523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 14389380 - 14389462
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaat 91  Q
    ||||||||||||||||||| ||| || |||||| | ||| | |||| ||||||||| |||||||||||| | | ||||||||||    
T  14389380 ggtcttctctctacatgtccaaaccacctaagtttgtttcc-accatcttttctacgataggtgctacctcaactctctctaat 14389462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 6641650 - 6641691
Alignment:
Q  37 aagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||    
T  6641650 aagtctagtttctaccatcttttctactataggtgatacccc 6641691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 2065048 - 2065116
Alignment:
Q  86 tctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||| |||||||  |||||||||||| | |||||||||| ||||||||| | | |||| |||||||    
T  2065048 tctaatggtgtcattactaatcctatcatatgtagtcttaccgctcatccagggtagcatcctcatctc 2065116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 7150606 - 7150682
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||| | || |||  |||||||||  ||||||||||||||| ||||||  ||||||| | ||||||||||    
T  7150606 tctctctaatgttttcgttccaaatcctatctcgtctagtcttaccacacatccaaagcaacattagcatctctgct 7150682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 24178587 - 24178428
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||| ||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  24178587 atctacgggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 24178488  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  24178487 ttcttaatcctatcatgtatagtcttaccactcatccaacgcaacatcctcatctctgct 24178428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 1275338 - 1275183
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat-tctctctaatgatgtcattct 102  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||||     
T  1275338 tacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccactctctctctaatggtgtcattcc 1275239  T
Q  103 taatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1275238 taatcctaccatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 1275183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 28977067 - 28977221
Alignment:
Q  4 tacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattctt 103  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |    
T  28977067 tacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcattcct 28977166  T
Q  104 aatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||| |||||| |||||||||||||| | ||||||  |||||||||||    
T  28977167 aatcctatcatttctagttttaccactcatccaacacaacatactcatctctgct 28977221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 3301921 - 3301774
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||   ||||||||||| || ||    
T  3301921 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggggctaccctcactctctctctaatggtgaca 3301822  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  3301821 ttcctaatcctatcatgtctagtcttaccactcatcaagcgcaacatc 3301774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 1287784 - 1287953
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctc------------tct 88  Q
    ||||||| |||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||    
T  1287784 atctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctctctctct 1287883  T
Q  89 aatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1287884 aatgatgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 1287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 2075679 - 2075838
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||| |||||||||||||||||| |||||| ||||||||   ||||||||||| |||||    
T  2075679 atctacgggtcttctctctacatgcccaaaccatctaagcctattgtctaccaacttttctactgtaggtgttacccccactctctctctaatgttgtca 2075778  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  2075779 ttcctaatcctatcttgtctagtcttacaactcatccaacgcaacatcctcatctctgct 2075838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16347583 - 16347738
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||  |  ||||||||||| | |||    
T  16347583 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccgctctctctctaatggtttca 16347682  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    || |||||| |||  ||||||||||||||||||||||| ||||||||| |||||||    
T  16347683 tttttaatcatatattgtctagtcttaccactcatccaacgcaacatcctcatctc 16347738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 12492589 - 12492751
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctacta---taggtgctaccccca--ttctctctaatgatg 95  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||   |||||||||||||||   ||||||||||| ||    
T  12492589 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagtaggtgctacccccactctctctctaatggtg 12492688  T
Q  96 tcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||| ||||| |||| ||||||||||||||||||||||| || |||||| |||||||||||    
T  12492689 tcattcctaatcttatcctgtctagtcttaccactcatccaacgtaacatcctcatctctgct 12492751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4496461 - 4496312
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||   ||||||||| | |||||    
T  4496461 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctacccccactctctctctaaaggtgtca 4496362  T
Q  99 ttcttaatcctatc--atgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||| ||||||||||   ||||||||||||||||||||||| |||||||||    
T  4496361 ttcctaatcctatcctgtgtctagtcttaccactcatccaacgcaacatc 4496312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10639381 - 10639215
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactatag-------gtgctacccccattctctct--aat 91  Q
    |||||| ||||||||||||||||| | || ||||||||| ||||||||||||||||||||||||||||       |||||| ||||| |||||||  |||    
T  10639381 atctacaggtcttctctctacatgcccaattcatctaagcctattttctaccaacttttctactatagtctataggtgctagccccactctctctctaat 10639282  T
Q  92 gatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||| |||||||||  ||||||||||||||||||||||| ||||||||| |||||||||||    
T  10639281 ggtgtcattcctaatcctattctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 10639215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 38685044 - 38684932
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  38685044 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 38684945  T
Q  99 ttcttaatcctat 111  Q
    ||| |||||||||    
T  38684944 ttcctaatcctat 38684932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 14665791 - 14665658
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca------ttctctctaatgat 94  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||| ||||||||||||||||||||||       ||||||||||| |    
T  14665791 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggtgctacccccactctctctctctctaatggt 14665692  T
Q  95 gtcattcttaatcctatcatgtctagtcttacca 128  Q
    ||||||  |||||||||||||||||| |||||||    
T  14665691 gtcatttctaatcctatcatgtctaggcttacca 14665658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 31636129 - 31636278
Alignment:
Q  5 acgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattctta 104  Q
    |||||||||||||||||||| | ||| || ||||||||| ||||||||| |||||||||||||||||||||||| | | ||||||||| |||||||  ||    
T  31636129 acgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactttctctaatgctgtcatttata 31636228  T
Q  105 atcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    || |||||  |||||||||||||||  |||||    ||||||||||||||||||    
T  31636229 attctatccagtctagtcttaccacaaatcca----aacatcatcatctctgct 31636278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20456850 - 20456776
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctac 75  Q
    |||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  20456850 atctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgctac 20456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 34273097 - 34272940
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca------------ttctctctaatgatg 95  Q
    ||||||||||||||||| | ||| |||||||| |||||||||||||||||||||| |||||||||||||||||             ||||||||||| ||    
T  34273097 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctacccccactctctctctctctctctctaatggtg 34272998  T
Q  96 tcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||| ||||||     |||||||||||||||||||||||  |||||||| |||||||||||    
T  34272997 tcattcctaatcc-----tgtctagtcttaccactcatccaatgcaacatcctcatctctgct 34272940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 11002645 - 11002785
Alignment:
Q  18 ctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtc 117  Q
    ||||||| | ||| || ||||||||| |||||||||  ||||||||| ||||||||||||  | ||||||||||| |||||||  |||| |||||   ||    
T  11002645 ctacatgcccaaaccacctaagtctagtttctaccatgttttctactgtaggtgctacccgaactctctctaatgttgtcatttctaattctatcccatc 11002744  T
Q  118 tagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    | |||||||||| |||||||||||||||| |||||||||||    
T  11002745 tcgtcttaccacacatccagcgcaacatcctcatctctgct 11002785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 145
Target Start/End: Original strand, 26884902 - 26885040
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttc-tactataggtgctacccccattctct--ctaatgatgtcattcttaat 106  Q
    |||| |||||||||||| ||| |  ||||| |||||||||||||||||||| | ||||||||||||||| || |||||  |||||| ||| |||| ||||    
T  26884902 tcttatctctacatgtccaaaccgcctaagcctattttctaccaacttttcctgctataggtgctaccctcactctctttctaatggtgttattcctaat 26885001  T
Q  107 cctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    ||||||  ||||||| |||||||||||||| ||||||||    
T  26885002 cctatcccgtctagttttaccactcatccaacgcaacat 26885040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 32516615 - 32516480
Alignment:
Q  19 tacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtct 118  Q
    |||| ||||||| || ||||| |||||||| |||| ||||||||||||| ||| ||| || | ||||||||||| |||||||  |||  ||||| |||||    
T  32516615 tacaagtctaaaccacctaagcctattttccaccatcttttctactataagtgttactccaactctctctaatgttgtcatttctaagtctatcctgtct 32516516  T
Q  119 agtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||||| |||||| | |||||||||||||||    
T  32516515 agtcttaccacacatccaacacaacatcatcatctc 32516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 14749377 - 14749297
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||| || | |||||||    
T  14749377 ggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctacaccaactctctct 14749297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15168869 - 15168756
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccc--attctctctaatgatgtca 98  Q
    |||||| |||| | |||| ||||||| ||| || || || ||||||||||||| |||||||||||||||||||||||||  | || |||||||| |||||    
T  15168869 atctacaggtcatttctcaacatgtccaaaccaccttagcctattttctaccatcttttctactataggtgctaccccccaactccctctaatggtgtca 15168770  T
Q  99 ttcttaatcctatc 112  Q
    ||||||||||||||    
T  15168769 ttcttaatcctatc 15168756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 33667286 - 33667194
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    ||||||||||||||||| | ||| || ||||||||| ||||||||| |||||||||||||||||||||||| | ||||  ||||| |||||||    
T  33667286 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactctcgttaatgttgtcatt 33667194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 36215544 - 36215418
Alignment:
Q  32 catctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaatcctatcatgtctagtcttaccac 129  Q
    ||||||||  ||||| ||||||||||||||||||||| ||||||| ||| |||||  ||||||  ||||||| ||||| |||||| |||||| ||||  |    
T  36215544 catctaagcatatttcctaccaacttttctactatagatgctacctccactctctccctaatg--gtcattcataatcatatcatatctagttttactgc 36215447  T
Q  130 tcatccagcgcaacatcatcatctctgct 158  Q
    ||||| ||||||||||  |||||||||||    
T  36215446 tcatctagcgcaacatactcatctctgct 36215418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 10082952 - 10083079
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat--tctctctaatgatgtcattcttaat 106  Q
    |||||||||||||||| | ||| ||  |||||||| ||||||||| ||||||||||||||||| |||||| ||  |||| |||||| | |||||  ||||    
T  10082952 gtcttctctctacatgccgaaaccacttaagtctagtttctaccatcttttctactataggtgataccccaatgctctccctaatgttctcatttctaat 10083051  T
Q  107 cctatcatgtctagtcttaccactcatc 134  Q
     |||||  ||||||||||||||| ||||    
T  10083052 tctatcccgtctagtcttaccacacatc 10083079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 418236 - 418318
Alignment:
Q  45 tttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttacc 127  Q
    ||||| ||| ||||||||| |||||||||||||| | ||||||||||| |||||||  |||| ||||||||||| ||||||||    
T  418236 tttctgccatcttttctaccataggtgctaccccaactctctctaatgttgtcatttctaattctatcatgtctcgtcttacc 418318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 28186955 - 28187030
Alignment:
Q  81 ttctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctg 156  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||||| ||||||  |||||||  |||||||||    
T  28186955 ttctctctaatgttgtcatttctaatcctaccatgtctagtcttaccacacatccaatgcaacattctcatctctg 28187030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 1525717 - 1525651
Alignment:
Q  5 acgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtg 71  Q
    |||||||||||||||||||||| ||  || ||||||||| ||||||||| ||||||||| |||||||    
T  1525717 acgggtcttctctctacatgtccaagccacctaagtctagtttctaccatcttttctacaataggtg 1525651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 14667806 - 14667753
Alignment:
Q  35 ctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||| |||| |||||||||||||||||||||||| | |||||||    
T  14667806 ctaagtctattttccaccatcttttctactataggtgctaccccaactctctct 14667753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 28676665 - 28676596
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc 77  Q
    ||||||||||||||||| | ||| || ||||| |||||||| |||| |||||||||||||| ||||||||    
T  28676665 ggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctaccc 28676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 79583 - 79503
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    ||||||||||||||||||| ||| || |||| | | ||||| |||| |||||||||||||||| ||||||| | |||||||    
T  79583 ggtcttctctctacatgtccaaaccacctaattatgttttccaccatcttttctactataggtactaccccaactctctct 79503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 2713014 - 2712897
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    ||||||||||||||||| | ||| || ||||||||| | ||||||| |||||  ||||||||||||||||| |  |||||| ||| |||||||  ||||     
T  2713014 ggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctaccccaa--ctctctgatgttgtcatttctaatt 2712917  T
Q  108 ctatcatgtctagtcttacc 127  Q
    ||| |  |||||||||||||    
T  2712916 ctaccccgtctagtcttacc 2712897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 37065597 - 37065533
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgcta 74  Q
    ||||||||||||||| | |||| | | ||||||| ||||||||| ||||||||||||||||||||    
T  37065597 tcttctctctacatgcccaaatgacccaagtctagtttctaccatcttttctactataggtgcta 37065533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18351112 - 18351190
Alignment:
Q  1 atctacgggtcttctctctaca-tgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||| ||||||||||||||| || | ||| || ||||| ||| |||||||||  |||||||||||||||||||||||    
T  18351112 atctacaggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctacccc 18351190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 20318974 - 20318905
Alignment:
Q  84 tctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||| |||||||| ||||||||||      |||||||||||||||||| ||||||||| |||||||||||    
T  20318974 tctctaatggtgtcattcctaatcctatcc-----agtcttaccactcatccaacgcaacatcctcatctctgct 20318905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 31906729 - 31906592
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaatc 107  Q
    |||||| ||||||||||||||  |||||||  ||||| | ||||||||||||| | ||||||  || | || |||||  ||||||||||||||| |||||    
T  31906729 tcttctatctacatgtctaaactatctaagaatatttccgaccaacttttctattgtaggtgtcactctcactctctccctaatgatgtcattcctaatc 31906630  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaacat 145  Q
    ||||   ||||||| |||||  ||||| | ||||||||    
T  31906629 ctattccgtctagttttaccgttcatcgaacgcaacat 31906592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 219702 - 219817
Alignment:
Q  45 tttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaa 142  Q
    |||| |||| |||||| || |||||||||||||| | |||||||  |||| |||||||| ||||| ||||  |||| |||||| ||| |||||| |||||    
T  219702 tttccaccaccttttcaacgataggtgctaccccaactctctctccaatgttgtcattcgtaatcttatctcgtcttgtcttaacacgcatccaacgcaa 219801  T
Q  143 catcatcatctctgct 158  Q
    |||  |||||| ||||    
T  219802 cattctcatctttgct 219817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 5305610 - 5305546
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||||||||||| ||| |||  |||| ||||| |||||||||||||||| |||||| |||||||||    
T  5305610 tctctctaatgttgttatttctaattctatcttgtctagtcttaccacacatccaacgcaacatc 5305546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 9235062 - 9234986
Alignment:
Q  83 ctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgctc 159  Q
    |||||||||| |||||||  ||||||||||  ||||||||||||||| ||||||  |||||||   |||||||||||    
T  9235062 ctctctaatgttgtcatttataatcctatcccgtctagtcttaccacacatccaatgcaacatttccatctctgctc 9234986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 21952424 - 21952364
Alignment:
Q  11 cttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtg 71  Q
    |||||||||||||||| ||| || || |||||| ||||| ||| |||||||||||||||||    
T  21952424 cttctctctacatgtccaaaccacctgagtctagtttctgccatcttttctactataggtg 21952364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 42199355 - 42199278
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctct 88  Q
    |||||||||||||||| | ||| || ||||||||| |||| |||| |||||||||  || |||||||||| |||||||||    
T  42199355 gtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac--taagtgctaccccaattctctct 42199278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 34040031 - 34039960
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    ||||||||||| ||| ||| ||||||||||||| |||||| ||| || ||||||| ||| ||||| ||||||    
T  34040031 tctctctaatggtgtaatttttaatcctatcatatctagttttatcattcatccaacgcgacatcctcatct 34039960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 6889062 - 6888933
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattc--tctctaatgatgtcattcttaat 106  Q
    |||||||||||||||||| ||| ||  |||| |||||||| |||| ||||||  ||||| |||||||||| | ||  ||| ||||  |||||||  ||||    
T  6889062 gtcttctctctacatgtccaaaccacttaagcctattttccaccatcttttcctctatacgtgctaccccaactctttctgtaatattgtcatttctaat 6888963  T
Q  107 cctatcatgtctagtcttaccactcatcca 136  Q
    | ||||   |||||||||||||| ||||||    
T  6888962 catatctcatctagtcttaccacacatcca 6888933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 27998385 - 27998343
Alignment:
Q  114 tgtctagtcttaccactcatccagcgcaacatcatcatctctg 156  Q
    |||||||||||||||| |||||| ||||||||| |||||||||    
T  27998385 tgtctagtcttaccacacatccaacgcaacatcctcatctctg 27998343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 39946934 - 39946775
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattc--tctctaatgatgtca 98  Q
    |||||| |||||||| |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||  ||| ||||| |||||    
T  39946934 atctacaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctttctataatggtgtca 39946835  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  39946834 ttcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 39946775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 18125250 - 18125097
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  18125250 atctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatt 18125151  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
      |||||||||||||||| |||||  |||||||||||||||||||  |||||||    
T  18125150 tctaatcctatcatgtctcgtcttgtcactcatccagcgcaacatgctcatctc 18125097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 36545226 - 36545065
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca----ttctctctaatgatgt 96  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||| ||||||||     ||||||||||| |||    
T  36545226 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttacccccactctctctctctaatggtgt 36545127  T
Q  97 cattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  36545126 cattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgct 36545065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 36565446 - 36565605
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||| ||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  36565446 atctacgggtattctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 36565545  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| |||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||    
T  36565546 ttcctaatcctatcctgtctagtcttaccactcatccaacgcatcatcctcatctctgct 36565605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 36395154 - 36395314
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaa-gtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtc 97  Q
    |||||| ||||||||||||||||| | ||| ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||    
T  36395154 atctacaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtc 36395253  T
Q  98 attcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  36395254 attcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 36395314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 18752093 - 18752233
Alignment:
Q  13 tctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatc 112  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||||     
T  18752093 tctctctacatgtccaaaccatctaag-ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatccctaatcctatt 18752191  T
Q  113 atgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||||||| ||||||| |||||||||||  |||||||    
T  18752192 atgtctagtcttaacactcattcagcgcaacattctcatctc 18752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 40813401 - 40813240
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca----ttctctctaatgatgt 96  Q
    |||||| | ||||||||||||||| | ||| |||||||  ||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||    
T  40813401 atctacagatcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgt 40813302  T
Q  97 cattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||||||| |||||||||||||||||||||||| | ||||||| | |||||||||    
T  40813301 cattcttaatcctattatgtctagtcttaccactcatccaacacaacatcctaatctctgct 40813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 42854209 - 42854364
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||| ||||||||| ||||||||   ||||||| ||| |||||    
T  42854209 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttctctgctataggtgttacccccactctctctctgatggtgtca 42854308  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||| |||||||||  ||||||||||||||||| ||||||||||||||| |||||||    
T  42854309 ttcctaatcctattctgtctagtcttaccacttatccagcgcaacatcgtcatctc 42854364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 2796622 - 2796473
Alignment:
Q  13 tctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattcttaatccta 110  Q
    |||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||| |||||||| ||||||||    
T  2796622 tctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggcgctacccccactctctctctaatggtgtcattcctaatccta 2796523  T
Q  111 tcatgtc--tagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||  ||||||||||||||||||||||||||||| |||||| ||||    
T  2796522 tcatgtctatagtcttaccactcatccagcgcaacatcctcatctttgct 2796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 8879649 - 8879800
Alignment:
Q  5 acgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccat--tctctctaatgatgtcattct 102  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||  ||||||||     
T  8879649 acgggtcttctctctacatacccaaatcatctaagtctattttctaccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcc 8879748  T
Q  103 taatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||||  ||| |||||||||||| ||| || |||||||  |||||||    
T  8879749 taatcctatctagtccagtcttaccacttatcaagtgcaacattctcatctc 8879800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 45419313 - 45419161
Alignment:
Q  2 tctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattc 101  Q
    ||||| |||||| |||||||||| | ||| || ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  45419313 tctacaggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctaccccaattctctctaatggtgtcattc 45419214  T
Q  102 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
     ||||| ||||   ||||||||||||||| ||||| ||||||||| |||||||    
T  45419213 ctaatcttatcccttctagtcttaccactaatccaacgcaacatcttcatctc 45419161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 12492116 - 12492206
Alignment:
Q  68 ggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  12492116 ggtgctacccccattctctctaatggtgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatatctgct 12492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 8932775 - 8932653
Alignment:
Q  5 acgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattctta 104  Q
    |||| |||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||||| |||||||| ||    
T  8932775 acggatcttctttctacatgtccaaaccatctaaatctattttctaccaacttttctactgtatgtgctacccccactctctctaatggtgtcattccta 8932676  T
Q  105 -atcctatcatgtctagtcttac 126  Q
      |  ||||||||||||||||||    
T  8932675 ttttgtatcatgtctagtcttac 8932653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12491343 - 12491418
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacc 76  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  12491343 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11523928 - 11524040
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaa-gtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtc 97  Q
    |||||||||||||||||||||||| | ||| ||||||| | |||||  |||||||||||||||||||||||||||||||||   ||||||||||| ||||    
T  11523928 atctacgggtcttctctctacatgcccaaaccatctaaagcctattaactaccaacttttctactataggtgctacccccactctctctctaatggtgtc 11524027  T
Q  98 attcttaatccta 110  Q
    |||| ||||||||    
T  11524028 attcctaatccta 11524040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 12796913 - 12797011
Alignment:
Q  9 gtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| ||| ||||||| ||| |||| |||||    
T  12796913 gtcttctctctgcatgcctaaatcatctaagcctattttctaccaacttttcttctataggtgttacctccactctttctaatggtgttattcctaatc 12797011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 6510633 - 6510784
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||| | ||||||||||||||| | ||| ||||||| | | ||||||||||||||||||| |||||||||||| | |  |||||  |||| |||||||    
T  6510633 atctacagatcttctctctacatgcccaaaccatctaaatttgttttctaccaacttttctattataggtgctacgctctctctcttcaatggtgtcatt 6510732  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatc 152  Q
      ||||| ||||   ||||||||||||||| ||||| | |||||||||||||    
T  6510733 tctaatcatatctcatctagtcttaccacttatccaacacaacatcatcatc 6510784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 32043660 - 32043522
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaa 105  Q
    ||||||||||||||||| | ||| || | ||||||| ||||||||| ||||| ||||||||||| ||||||  |  ||||||||||| |||||||  |||    
T  32043660 ggtcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactataggtgataccccaactctctctctaatgttgtcatttctaa 32043561  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaaca 144  Q
    | |||||  ||||||||||||||| |||||| |||||||    
T  32043560 ttctatcccgtctagtcttaccacacatccaacgcaaca 32043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 25985560 - 25985462
Alignment:
Q  37 aagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatcc 135  Q
    ||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||| |||| ||  |||| ||||| ||||| |||||||||| |||||    
T  25985560 aagtctagtttctaccatcttttctactataggtgctaccccaactctctctaatgttgtcgtttctaattctatcctgtcttgtcttaccacacatcc 25985462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 13986536 - 13986416
Alignment:
Q  36 taagtctattttctaccaacttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatcatgtctagtcttaccactcat 133  Q
    ||||||||||||||||||  |||| |||||||||||||||||| | || ||||  ||||||||||||| ||||  ||||  ||||||| |||||||||||    
T  13986536 taagtctattttctaccatattttgtactataggtgctaccccaaatccctctttaatgatgtcattcctaattatatctcgtctagtattaccactcat 13986437  T
Q  134 ccagcgcaacatcatcatctc 154  Q
    |||| | |||||| |||||||    
T  13986436 ccagtgtaacatcctcatctc 13986416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 30748534 - 30748377
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||| ||||||||||||||||| | ||| || ||||| ||   ||| |||| |||||||||||  ||||| ||| | | ||||| ||||| |||||||    
T  30748534 atctacaggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctactactggtgcgaccacaactctctgtaatgttgtcatt 30748435  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
      ||||||||||||||||| ||| ||||| |||||| || |||||| |||| ||||||    
T  30748434 tctaatcctatcatgtctaatctaaccacacatccaacgaaacatcctcatatctgct 30748377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 15215559 - 15215631
Alignment:
Q  82 tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||||| |||||||  |||||||||| ||| ||||||||||||||||||||| ||||||| |||||||    
T  15215559 tctctctaatggtgtcatttctaatcctatcctgtatagtcttaccactcatccagcacaacatcctcatctc 15215631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 37077817 - 37077687
Alignment:
Q  14 ctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctct--ctaatgatgtcattcttaatcctat 111  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||            || || |||||  | |||| |||||||| |||||||||    
T  37077817 ctctctacatgcccaaaccatctaagtctattttctaccaacttttctac------------cctcactctcttccgaatggtgtcattcctaatcctat 37077730  T
Q  112 catgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    |  ||||||| |||||||||||||||||||||||| |||||||    
T  37077729 ctcgtctagttttaccactcatccagcgcaacatcctcatctc 37077687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 25288916 - 25288820
Alignment:
Q  64 tataggtgctacccccat--tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||   ||||||||||| |||| ||| ||||||||||   ||||||||||||||| ||||||| ||||||| |||| ||||||    
T  25288916 tataggtgctacccccacactctctctaatggtgtccttcctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgct 25288820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 25300251 - 25300155
Alignment:
Q  64 tataggtgctacccccat--tctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||||||||||||||   ||||||||||| |||| ||| ||||||||||   ||||||||||||||| ||||||| ||||||| |||| ||||||    
T  25300251 tataggtgctacccccacactctctctaatggtgtccttcctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgct 25300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 44681251 - 44681381
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaa 105  Q
    ||||||||||||| || || ||| | ||||||  ||||||| |||| |||||||| ||||||||||||| |  |  ||||||||||| |||||||  |||    
T  44681251 ggtcttctctctagatttccaaaccttctaagcttattttccaccatcttttctattataggtgctaccacaactgtctctctaatgttgtcatttctaa 44681350  T
Q  106 tcctatcatgtctagtcttaccactcatcca 136  Q
    || ||||  ||||||||||||||| ||||||    
T  44681351 tcttatctcgtctagtcttaccacacatcca 44681381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9695708 - 9695583
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||| || |||||||||||||| | ||| || ||||| | | |||| |||| |||||||||||||||||||||||| |   ||||| ||||| |||||    
T  9695708 atctacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctaccccaaatatctctataatgttgtca 9695609  T
Q  99 ttcttaatcctatcatgtctagtctt 124  Q
    ||  |||| ||||| |||||||||||    
T  9695608 tttctaattctatcctgtctagtctt 9695583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 26905122 - 26905168
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttt 58  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  26905122 ttctctctacatatctaaatcatctaagcctattttctaccaacttt 26905168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 7046409 - 7046285
Alignment:
Q  3 ctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccc--ccattctctctaatgatgtcatt 100  Q
    ||||| || ||||||||||||| | ||| || ||||| | |  ||| |||| ||||||||| || ||||||||||  ||  ||||||||||| |||||||    
T  7046409 ctacgtgttttctctctacatgcccaaaccagctaagccgaggttccaccatcttttctacgattggtgctacccagcctctctctctaatgttgtcatt 7046310  T
Q  101 cttaatcctatcatgtctagtctta 125  Q
      |||||||||||||||||||||||    
T  7046309 tctaatcctatcatgtctagtctta 7046285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 13171895 - 13172011
Alignment:
Q  42 tattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcg 139  Q
    ||||||| |||| ||||||||||||||||||| ||||  |  ||||||||||  |||||||  ||||||||||  |||||||||||| || ||||||  |    
T  13171895 tattttccaccatcttttctactataggtgcttccccaactctctctctaatcttgtcatttctaatcctatcccgtctagtcttactacacatccaatg 13171994  T
Q  140 caacatcatcatctctg 156  Q
    ||||||  |||||||||    
T  13171995 caacattctcatctctg 13172011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 39953482 - 39953628
Alignment:
Q  14 ctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattct---taatccta 110  Q
    ||||||||||| ||||| || |||| |||| ||||||||| |||||||  ||||||||||| ||| | |||||||  | |||||||| |   ||||  ||    
T  39953482 ctctctacatgcctaaaccacctaaatctagtttctaccatcttttctcatataggtgctatcccaactctctct-ctaatgtcattatttctaattata 39953580  T
Q  111 tcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||| || ||||||||| |||||| ||||||||  |||||||||||    
T  39953581 tcatgtttaatcttaccacacatccaacgcaacattctcatctctgct 39953628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 30113442 - 30113557
Alignment:
Q  41 ctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagc 138  Q
    ||||||||||||| ||||||||||||| ||| ||||||  |  |||||||||| ||||||||| ||||| |||||| |||| ||||| ||  |||| |||    
T  30113442 ctattttctaccatcttttctactatatgtgttaccccgactctctctctaataatgtcattcataatcttatcatatctattcttaacaaacatctagc 30113541  T
Q  139 gcaacatcatcatctc 154  Q
     ||||||  |||||||    
T  30113542 acaacattctcatctc 30113557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2776434 - 2776513
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca 80  Q
    |||||||||||||||||| ||||| | ||| || ||||| | | ||||||||| | ||||||| ||||||||||||||||    
T  2776434 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 2776513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 33666748 - 33666814
Alignment:
Q  45 tttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatc 112  Q
    ||||||||| ||||||||| |||||||||||||| | |||||||  | ||||||||||||||||||||    
T  33666748 tttctaccatcttttctacgataggtgctaccccaactctctct-cttatgtcattcttaatcctatc 33666814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 42493565 - 42493668
Alignment:
Q  55 cttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    ||||||||||||||||| |||||| | |||||| |||| |||||||   ||||| ||| || ||| ||||||||| || ||| ||||||||| ||||||     
T  42493565 cttttctactataggtgttaccccaactctctccaatgttgtcatttacaatccaatcttgactaatcttaccacacaaccaacgcaacatcctcatctt 42493664  T
Q  155 tgct 158  Q
    ||||    
T  42493665 tgct 42493668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 25985839 - 25985881
Alignment:
Q  36 taagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  25985839 taagtctagtttctacaaacttttctactataggtgctacccc 25985881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 7103326 - 7103274
Alignment:
Q  22 atgtctaaatcatctaagtctattttctaccaacttttctactataggtgcta 74  Q
    ||||||||| || ||||| ||| ||||||||| ||||||||||||||||||||    
T  7103326 atgtctaaaacacctaagcctagtttctaccatcttttctactataggtgcta 7103274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 10080119 - 10080264
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc--cattctctctaatgatgtcattcttaa 105  Q
    ||||||||||||||||| | ||| |||| | | ||| |||| |||| |||||||||| ||| ||||||| |  |  ||||||||||| |||||||  |||    
T  10080119 ggtcttctctctacatgcccaaaccatc-aggcctagtttccaccatcttttctact-tagatgctacctcaactctctctctaatgttgtcatttctaa 10080216  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    || ||||  ||||||||||||||  || ||| ||||||||||||||||    
T  10080217 tcttatctcgtctagtcttaccaaacacccaacgcaacatcatcatct 10080264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 16351411 - 16351312
Alignment:
Q  57 tttctactataggtgctacccccattctctct--aatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    |||||||||||||||||||||  |||||||||  |||| |||||||  |||  ||||   |||||||||||||||  ||||| ||||||||| |||||||    
T  16351411 tttctactataggtgctaccctaattctctctctaatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaacatcttcatctc 16351312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 21121180 - 21121105
Alignment:
Q  56 ttttctactataggtgctaccccca--ttctctctaatgatgtcattcttaatcctatcatgtctagtcttaccac 129  Q
    |||| ||||||||||||||||||||   ||||||||||| || ||||  ||||||||||  |||||||||||||||    
T  21121180 ttttgtactataggtgctacccccactctctctctaatggtgccatttctaatcctatcccgtctagtcttaccac 21121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 2518637 - 2518742
Alignment:
Q  41 ctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagc 138  Q
    |||||||| |||| ||||||||||  |||||||||||| |  |||||||||||  |||||||  ||||||||||   |||||||||||||| ||||||      
T  2518637 ctattttccaccatcttttctacttgaggtgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaat 2518735  T
Q  139 gcaacat 145  Q
    |||||||    
T  2518736 gcaacat 2518742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 25439477 - 25439397
Alignment:
Q  64 tataggtgctacccccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatc 146  Q
    ||||| |||||||||||  |||||||||| | || ||| || |||||||   ||||||||||||||| |||||||||||||||    
T  25439477 tatagttgctaccccca--ctctctaatggtatcgttcctattcctatctcatctagtcttaccactaatccagcgcaacatc 25439397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 29520681 - 29520583
Alignment:
Q  57 tttctactataggtgctacccc--cattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatct 153  Q
    |||||||||||| ||| |||||  |  ||||||||||| | |||||  ||||||||||   |||||||||||||| |||||| ||||||||| ||||||    
T  29520681 tttctactatagatgccaccccaactctctctctaatggtatcatttctaatcctatcccatctagtcttaccacacatccaacgcaacatcctcatct 29520583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 36143435 - 36143287
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatc 107  Q
    |||||| |||||| ||| | ||| || |||||||||||||| |||| || |||| |||||||||||||| | |  |||||||||  | || ||  |||||    
T  36143435 ggtcttttctctaaatgcccaaaccacctaagtctattttccaccatctattctgctataggtgctacctcga--ctctctaatcttttcctttctaatc 36143338  T
Q  108 ctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||   |||||||||||||| |  ||| | ||||||| |||||||||||    
T  36143337 ctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgct 36143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21121223 - 21121177
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctatttt 47  Q
    |||||||||||||||||||||||||| ||| |||||||  |||||||    
T  21121223 atctacgggtcttctctctacatgtccaaaccatctaaacctatttt 21121177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 39760683 - 39760788
Alignment:
Q  55 cttttctactataggtgctacccccattct--ctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatc 152  Q
    ||||||||| |||||||||| ||| | |||  |||||||| | |||||  || ||||||| |||||| || |||||| |||||| | ||||||| |||||    
T  39760683 cttttctacgataggtgctaacccaactctgtctctaatgttatcatttctactcctatcttgtctaatcctaccacacatccaacacaacatcctcatc 39760782  T
Q  153 tctgct 158  Q
    ||||||    
T  39760783 tctgct 39760788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 30456452 - 30456575
Alignment:
Q  36 taagtctattttctaccaacttttctactataggtgctaccc--ccattctctctaatgatgtcattcttaatcctatcatgtctagtcttaccactcat 133  Q
    |||||||| ||||||||| |||||||||||||||||| || |   |  |||||||||||  ||||||  |||| |||||   | | |||||||||| |||    
T  30456452 taagtctagtttctaccatcttttctactataggtgcaactcgaactatctctctaatgtcgtcatttctaattctatcccat-tggtcttaccacacat 30456550  T
Q  134 ccagcgcaacatcatcatctctgct 158  Q
    ||| ||||||||| |||||||||||    
T  30456551 ccaacgcaacatcctcatctctgct 30456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 41444547 - 41444608
Alignment:
Q  17 tctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||||||| ||| || ||||  ||| |||| |||| ||||||||||||||||||||||||    
T  41444547 tctacatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctacccc 41444608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 11129797 - 11129921
Alignment:
Q  12 ttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcattcttaatcctat 111  Q
    ||||||||||||||||||| ||  |||| ||| ||||||| | |||||| ||||||| || ||||   | ||||| ||||| | || ||  ||||| |||    
T  11129797 ttctctctacatgtctaaaacacataagactagtttctacaatcttttcaactatagatgttaccttaactctctttaatgttatcgtttctaatcttat 11129896  T
Q  112 catgtctagtcttaccactcatcca 136  Q
     ||||||| ||||||||| ||||||    
T  11129897 tatgtctaatcttaccacacatcca 11129921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 45512709 - 45512777
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    |||||||| || ||| | ||| ||||||||  ||||||| | || ||||||||||||||||||||||||    
T  45512709 tcttctctttatatgcccaaaccatctaagcttattttccatcatcttttctactataggtgctacccc 45512777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 82798 - 82643
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    ||||| || ||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  82798 atctatggatcttctctctatatgtccaaatcatctaagcccattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 82699  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  82698 ttcttaatcctatcatgtctagtcttactactcatccagtgcaacatcctcatctc 82643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 31545 - 31386
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca--ttctctctaatgatgtca 98  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  31545 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtca 31446  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    ||| ||||| |||| ||||||||||||||||||||||| ||||||||| | |||||||||    
T  31445 ttcctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctaatctctgct 31386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 44080 - 44150
Alignment:
Q  8 ggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc 78  Q
    ||||||||||||||||| | ||| || ||||| ||||||||  ||| ||||||||||||||||||||||||    
T  44080 ggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctacccc 44150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 158
Target Start/End: Original strand, 11810 - 11962
Alignment:
Q  10 tcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctaccccca----ttctctctaatgatgtcattcttaa 105  Q
    |||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||     ||||||| ||| |||||||| |||    
T  11810 tcttctgtctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccccactatctctctctgatggtgtcattcctaa 11909  T
Q  106 tcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctgct 158  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||||||||    
T  11910 tcctattatgtctagtcttaccgctcatccagcgcaacatcctcatctctgct 11962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 25683 - 25809
Alignment:
Q  34 tctaagtctattttctaccaacttttctactataggtgctacccccattctc--tctaatgatgtcattcttaatcctatcatgtctagtcttaccactc 131  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||  ||||||| |||||||| |||||||||||||||||||||||||||||    
T  25683 tctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactc 25782  T
Q  132 atccagcgcaacatcatcatctctgct 158  Q
    ||||| | ||||||| | |||||||||    
T  25783 atccaacacaacatcctaatctctgct 25809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1153 - 1271
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  1153 atctacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccctcactctctctaatggtgtcatt 1252  T
Q  101 cttaatcctatcatgtcta 119  Q
    | |||||||||| ||||||    
T  1253 cataatcctatcctgtcta 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 4477 - 4634
Alignment:
Q  2 tctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccc---cattctctctaatgatgtca 98  Q
    |||||| ||||||| |||||||| | |||  ||||||| ||||||| |||||||||||||||||||||||| |||||   |  ||||||||||| |||||    
T  4477 tctacgagtcttctttctacatgcccaaactatctaagcctattttttaccaacttttctactataggtgccaccccactctctctctctaatggtgtca 4576  T
Q  99 ttcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctctg 156  Q
    ||  |||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||    
T  4577 tttataatcctatcatgtctagtcttaccattcatccaacgcaacatcctcatatctg 4634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 86814 - 86967
Alignment:
Q  1 atctacgggtcttctctctacatgtctaaatcatctaagtctattttctaccaacttttctactataggtgctacccccattctctctaatgatgtcatt 100  Q
    ||||||||||||||||| |||||||| |||  ||||||| |||||||||||||||||||||||| |   |    | | |  ||||||||||| |||||||    
T  86814 atctacgggtcttctctttacatgtccaaactatctaagactattttctaccaacttttctactctctctctctctctctctctctctaatggtgtcatt 86913  T
Q  101 cttaatcctatcatgtctagtcttaccactcatccagcgcaacatcatcatctc 154  Q
      ||||| |||| | ||| ||||||||||||||||||||||||||| |||||||    
T  86914 tctaatcttatcctttctggtcttaccactcatccagcgcaacatcctcatctc 86967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 20683 - 20624
Alignment:
Q  163 ctccctttttaaactcgtcgaaatcgtcaaatgtgtctcttcatctaaatagaacccttt 222  Q
    ||||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  20683 ctccccttttaaactccttgaaatcgtcacatgtgtctcttcatctaaatagaacccttt 20624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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