View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0631_low_36 (Length: 251)
Name: NF0631_low_36
Description: NF0631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0631_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 4565747 - 4565967
Alignment:
| Q |
1 |
caaaccccacgtcagtcatcacccaaaagtaatcctgcaattgaagatagaaactcacaattattttatgagtgaataaaaatttgacattaaaattgta |
100 |
Q |
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|
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4565747 |
caaaccccacctcagtcatcacc-aaaagtaatcctgcaattgaagatagaaactcacaattattttatgagtgaataaaaatttgacattaaaattgta |
4565845 |
T |
|
| Q |
101 |
aattcagatcaaaatacttatccaattagatatgtatagaggatgagataaactaccgacaataaattgatcaatgatattagccccttaaacataaatg |
200 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4565846 |
aattcagatcaaaatacttatccaattagatatgtatagaggatgagataaactaccgacaataaattgatcaatgatattagccccttaaacataaatg |
4565945 |
T |
|
| Q |
201 |
cactcaaaatgaagtatatttt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
4565946 |
cactcaaaatgaagtatatttt |
4565967 |
T |
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