View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0635_high_1 (Length: 582)

Name: NF0635_high_1
Description: NF0635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0635_high_1
NF0635_high_1
[»] chr4 (24 HSPs)
chr4 (13-418)||(6737963-6738367)
chr4 (114-340)||(6541756-6541982)
chr4 (230-546)||(6748533-6748858)
chr4 (227-361)||(6503827-6503961)
chr4 (1-111)||(6542735-6542844)
chr4 (249-338)||(6811523-6811612)
chr4 (249-340)||(6792068-6792159)
chr4 (227-338)||(6502599-6502710)
chr4 (249-338)||(6593461-6593550)
chr4 (249-336)||(6832044-6832131)
chr4 (249-338)||(6627110-6627199)
chr4 (252-340)||(6522906-6522994)
chr4 (230-338)||(6550723-6550831)
chr4 (249-361)||(6646747-6646859)
chr4 (419-572)||(6811702-6811855)
chr4 (249-338)||(6769229-6769318)
chr4 (483-563)||(6503616-6503696)
chr4 (484-563)||(6626876-6626955)
chr4 (481-563)||(6502365-6502447)
chr4 (475-563)||(6792312-6792400)
chr4 (499-572)||(6832300-6832373)
chr4 (484-559)||(6647009-6647084)
chr4 (14-123)||(6748303-6748414)
chr4 (481-572)||(6665419-6665510)
[»] scaffold0729 (2 HSPs)
scaffold0729 (249-340)||(6470-6561)
scaffold0729 (475-563)||(6229-6317)


Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 13 - 418
Target Start/End: Original strand, 6737963 - 6738367
Alignment:
Q  13 atctttatggcatttttaatactaaatgttttgattcgtttgactattatgagtttagcaaatatattattttaacttatgtacatgttggagaattgtt 112  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || | |||| ||||||| |||| |||||||||||||    
T  6737963 atctttattgcatttttaatactaaatgttttgattcatttgactattatgagtttagcaaatttagtgttttcacttatgcacattttggagaattgtt 6738062  T
Q  113 atacatataatggtctcttgtttctctattatacaggaacggaggtgaacatataacacaggtagttaaatgtgctactcttattgtaagcaagaaaaga 212  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||| |||| |||||| | |||||||||||||||||||||||  ||||||||||||||    
T  6738063 atacatataatcgtctcttgtttctctattatacaggaacag-ggtaaacagataacaaatgtagttaaatgtgctactcttatgataagcaagaaaaga 6738161  T
Q  213 gcctcgttccatatagagagcatacactctcgtgcccaagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatga 312  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  6738162 gcctcattccatatggagagcatacattctcgtgcccaagatgtgattcaactattgaaacaatcaaaatcttctctcctgctagggatatgggggatga 6738261  T
Q  313 cagggattggtaaatcaaccattgccaacgaaatttatactcagattgggaacttttttgaggacaaatgctacctagaatatgttaagggagcatttca 412  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||     
T  6738262 cagggattggtaaatcaaccattgccaacgccatttatactcggattgggaacttttttgaggacaaatgctgcctataatatgtcaagggagcatttcg 6738361  T
Q  413 tactct 418  Q
    ||||||    
T  6738362 tactct 6738367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 114 - 340
Target Start/End: Complemental strand, 6541982 - 6541756
Alignment:
Q  114 tacatataatggtctcttgtttctctattatacaggaacggaggtgaacatataacacaggtagttaaatgtgctactcttattgtaagcaagaaaagag 213  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6541982 tacatataattgtctcttgtttctctactatacaggaacagaggtgaacatataacacatgtagttaaatgtgctactcttattgtaagcaagaaaagag 6541883  T
Q  214 cctcgttccatatagagagcatacactctcgtgcccaagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgac 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  6541882 cctcgttccatatagagagcatacactctcgtgcccaagatgtgattcaactattgaaacaatcaaaatgtcctcttttagtagggatatgggggatgac 6541783  T
Q  314 agggattggtaaatcaaccattgccaa 340  Q
    ||||||||| ||||||||||| |||||    
T  6541782 agggattggcaaatcaaccatcgccaa 6541756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 230 - 546
Target Start/End: Original strand, 6748533 - 6748858
Alignment:
Q  230 gagcatacactctcgtgcccaagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatca 329  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||| ||||||||||||||| ||||| |||||||||||    
T  6748533 gagcataaattctcgtgcccaagatgtgattcaactattaaaacaatcgaaatcccctctcctactcgggatatgggggatggcaggggttggtaaatca 6748632  T
Q  330 accattgccaacgaaatttatactcagattgggaacttttttgaggacaaatgctacctagaatatgttaagggagcat----------ttcatactcta 419  Q
     | ||||| || |  ||||||  ||| |||||   || ||||||||| | |||||  |||||||||||  ||||| |||          ||| |||||||    
T  6748633 gctattgctaaagccatttatgatcaaattggtccctattttgaggatacatgctttctagaatatgtccagggaacatcagatgaaaattc-tactcta 6748731  T
Q  420 gtttctttacaagagaatattcttttagatatcgacaaagcaagtaaaatagatatatctgcagttgaatcaggaaaagtgattttaaaagaaagacttc 519  Q
    |||||||||||||||||  ||||||| ||  |||||| ||||| |||||||||| ||||| || |  |||| ||| ||| ||||||||||||||||||||    
T  6748732 gtttctttacaagagaaacttctttttgaactcgacacagcaactaaaatagatgtatctacaatgcaatctggagaagagattttaaaagaaagacttc 6748831  T
Q  520 agcataaaagggtacttcttatacttg 546  Q
    | ||||||| ||||||| |||||||||    
T  6748832 aacataaaaaggtactttttatacttg 6748858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 6503961 - 6503827
Alignment:
Q  227 agagagcatacactctcgtgcccaagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaa 326  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  6503961 agagagcatacattctcgtgcacaagatgtgattcaactattgaaacaatcaaaatctcctctcctgctggggatatgggggatgacagggattggtaaa 6503862  T
Q  327 tcaaccattgccaacgaaatttatactcagattgg 361  Q
    |||||||||||| | |  ||||||| |||||||||    
T  6503861 tcaaccattgccgaagccatttataatcagattgg 6503827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 6542844 - 6542735
Alignment:
Q  1 ttagattactaaatctttatggcatttttaatactaaatgttttgattcgtttgactattatgagtttagcaaatatattattttaacttatgtacatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||| ||||||||||||||    
T  6542844 ttagattactaaatctttatggcatttttaatactaaatgttttgattcatgtgactattatgagtttagcaaat-tagtattttcacttatgtacatgt 6542746  T
Q  101 tggagaattgt 111  Q
    |||||||||||    
T  6542745 tggagaattgt 6542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 6811523 - 6811612
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgcc 338  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6811523 caagatgtgattcaacaattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcagccattgcc 6811612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 249 - 340
Target Start/End: Original strand, 6792068 - 6792159
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgccaa 340  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6792068 caagatgtgattcaactattgaaacgatcaaaaagtcctatcctactagggatatgggggatgacagggattggtaaatcaaccattgccaa 6792159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 6502710 - 6502599
Alignment:
Q  227 agagagcatacactctcgtgcccaagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaa 326  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||||||||| |||||||| |||||    
T  6502710 agagagcatacattctcatgcgcaagatgtgattcaactattgaaacaatcaagatctcctctcctgctagggatgtgggggatgtcagggattagtaaa 6502611  T
Q  327 tcaaccattgcc 338  Q
    ||||||||||||    
T  6502610 tcaaccattgcc 6502599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 6593550 - 6593461
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgcc 338  Q
    ||||| ||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  6593550 caagacgtgattcaactattgaaacaatcaaaaagtcctctcataatagggatatgggggatgacagggattggtaaatcaaccattgcc 6593461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 6832044 - 6832131
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattg 336  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  6832044 caagatgtgattcaactattgaaacagtcaaaatctcctctcatactagggatatgggggatgccagggattggtaaatcaagcattg 6832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 6627199 - 6627110
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgcc 338  Q
    |||||||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||||  |||||||||||||||||||||||||    
T  6627199 caagatgtgattcaactattgaaacaatcaaactctcctcttctaatagggatatgggggatgggagggattggtaaatcaaccattgcc 6627110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 252 - 340
Target Start/End: Complemental strand, 6522994 - 6522906
Alignment:
Q  252 gatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgccaa 340  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||| ||||||||||||  |||||||||||||||||||||||||||    
T  6522994 gatgtgattcaactattgaaacaatcaaaatctcctctcgtaataggcatatgggggatggtagggattggtaaatcaaccattgccaa 6522906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 230 - 338
Target Start/End: Complemental strand, 6550831 - 6550723
Alignment:
Q  230 gagcatacactctcgtgcccaagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatca 329  Q
    ||||||| | |||||||  |||||||||||||||||||||||||||||||||| |||||| ||  ||||||| ||||||||| |||||||||||||| ||    
T  6550831 gagcataaattctcgtgtgcaagatgtgattcaactattgaaacaatcaaaatctcctctacttatagggatttgggggatggcagggattggtaaaaca 6550732  T
Q  330 accattgcc 338  Q
    |||||||||    
T  6550731 accattgcc 6550723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 249 - 361
Target Start/End: Original strand, 6646747 - 6646859
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgccaacgaaattt 348  Q
    |||||||||||||| || ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| | |  ||||    
T  6646747 caagatgtgattcacctgttgaaacaatcaagaagtcctctcctaatagggatatgggggatggcagggatcggtaaatcaaccattgccgaagccattt 6646846  T
Q  349 atactcagattgg 361  Q
    ||| |||||||||    
T  6646847 ataatcagattgg 6646859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 572
Target Start/End: Original strand, 6811702 - 6811855
Alignment:
Q  419 agtttctttacaagagaatattcttttagatatcgacaaagcaagtaaaatagatatatctgcagttgaatcaggaaaagtgattttaaaagaaagactt 518  Q
    |||||||||||||| |||  ||||||||||| |||||||||||| ||||| | | ||  || || ||||||  ||||||| |||||||||||||||| ||    
T  6811702 agtttctttacaagcgaaacttcttttagatgtcgacaaagcaactaaaacaaagattcctacaattgaattgggaaaagagattttaaaagaaagattt 6811801  T
Q  519 cagcataaaagggtacttcttatacttgatgatgttgataaattgcaacagcta 572  Q
    |  |||||||||||||||||| ||||||| |||||| |||||||| | ||||||    
T  6811802 cgacataaaagggtacttcttgtacttgacgatgttaataaattggagcagcta 6811855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 6769229 - 6769318
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgcc 338  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||| | ||||| |||||||||||||||||||||||| | |||||||||    
T  6769229 caagatgtgattcaattattgaaacaatcaaaatctcctttcctaattgggatttgggggatgacagggattggtaaaactaccattgcc 6769318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 483 - 563
Target Start/End: Complemental strand, 6503696 - 6503616
Alignment:
Q  483 gttgaatcaggaaaagtgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataaattg 563  Q
    ||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||| |||||||  ||||||||||||||    
T  6503696 gttgaatcaggaagagttattttaaaagaaaggcttcaacataaaagggtacttcttctacttgacaatgttgataaattg 6503616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 563
Target Start/End: Complemental strand, 6626955 - 6626876
Alignment:
Q  484 ttgaatcaggaaaagtgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataaattg 563  Q
    |||||||||| ||||||||||||||||||||||| |  |||||||| ||||||||||||||||| |||||| ||||||||    
T  6626955 ttgaatcagggaaagtgattttaaaagaaagactccgtcataaaagtgtacttcttatacttgacgatgttaataaattg 6626876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 6502447 - 6502365
Alignment:
Q  481 cagttgaatcaggaaaagtgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataaattg 563  Q
    ||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||| ||||| |  ||||||| ||||||    
T  6502447 cagttgaatcaggaagaattattttaaaagaaagacttcaacataaaagggtacttcttctactttacaatgttgacaaattg 6502365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 475 - 563
Target Start/End: Original strand, 6792312 - 6792400
Alignment:
Q  475 tatctgcagttgaatcaggaaaagtgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataaattg 563  Q
    ||||| || |||||||||||| || ||| |||||| |||| ||||| |||||||||||||||||| |||||||  ||||||||||||||    
T  6792312 tatctacaattgaatcaggaacagagatgttaaaacaaagccttcaacataaaagggtacttcttgtacttgacaatgttgataaattg 6792400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 499 - 572
Target Start/End: Original strand, 6832300 - 6832373
Alignment:
Q  499 tgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataaattgcaacagcta 572  Q
    |||||| |||||||| |||||  ||||||||||||||||||||||||||  |||||||||||||| | ||||||    
T  6832300 tgatttcaaaagaaaaacttcgacataaaagggtacttcttatacttgacaatgttgataaattggatcagcta 6832373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 559
Target Start/End: Original strand, 6647009 - 6647084
Alignment:
Q  484 ttgaatcaggaaaagtgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataa 559  Q
    ||||||||||||||   ||||||||||||| ||||||  ||||||||||||||||| |||||||  ||||||||||    
T  6647009 ttgaatcaggaaaaaatattttaaaagaaaaacttcataataaaagggtacttcttgtacttgacaatgttgataa 6647084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 6748303 - 6748414
Alignment:
Q  14 tctttatggcatttttaatactaaatgttttgattcgtttgactattatgagtttagcaaatata--ttattttaacttatgtacatgttggagaattgt 111  Q
    ||||||||| ||||||||||  | |||||||||||  ||||| ||| ||| ||||||||||| ||  ||||||| || ||   | |||||||||||||||    
T  6748303 tctttatggaatttttaataacacatgttttgatttatttgaatataatgcgtttagcaaatttacattattttcacgtacacaaatgttggagaattgt 6748402  T
Q  112 tatacatataat 123  Q
    ||||||||||||    
T  6748403 tatacatataat 6748414  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 572
Target Start/End: Original strand, 6665419 - 6665510
Alignment:
Q  481 cagttgaatcaggaaaagtgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataaattgcaacagcta 572  Q
    ||||| |||||||||  || ||||||||||| || ||||| |||||||||||||||||| |||||||  ||||| ||| |||| | ||||||    
T  6665419 cagttaaatcaggaagcgttattttaaaagacaggcttcaacataaaagggtacttcttctacttgacaatgtttatagattggagcagcta 6665510  T

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Target: scaffold0729 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 249 - 340
Target Start/End: Complemental strand, 6561 - 6470
Alignment:
Q  249 caagatgtgattcaactattgaaacaatcaaaatgtcctctcctactagggatatgggggatgacagggattggtaaatcaaccattgccaa 340  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6561 caagatgtgattcaactattgaaacgatcaaaaagtcctatcctactagggatatgggggatgacagggattggtaaatcaaccattgccaa 6470  T

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Target: scaffold0729; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 475 - 563
Target Start/End: Complemental strand, 6317 - 6229
Alignment:
Q  475 tatctgcagttgaatcaggaaaagtgattttaaaagaaagacttcagcataaaagggtacttcttatacttgatgatgttgataaattg 563  Q
    ||||| || |||||||||||| || ||| |||||| |||| ||||| |||||||||||||||||| |||||||  ||||||||||||||    
T  6317 tatctacaattgaatcaggaacagagatgttaaaacaaagccttcaacataaaagggtacttcttgtacttgacaatgttgataaattg 6229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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